academia-mcp 1.7.3__py3-none-any.whl → 1.8.0__py3-none-any.whl

academia_mcp/server.py

@@ -17,6 +17,7 @@ from .tools.latex import (
     compile_latex_from_str,
     get_latex_template,
     get_latex_templates_list,
+    read_pdf,
 )
 from .tools.web_search import web_search, tavily_web_search, exa_web_search, brave_web_search
 from .tools.visit_webpage import visit_webpage
@@ -70,6 +71,7 @@ def run(
     server.add_tool(get_latex_templates_list)
     server.add_tool(visit_webpage)
     server.add_tool(download_pdf_paper)
+    server.add_tool(read_pdf)
 
     if not disable_web_search_tools:
         if os.getenv("TAVILY_API_KEY"):

academia_mcp/tools/__init__.py

@@ -9,6 +9,7 @@ from .latex import (
     compile_latex_from_str,
     get_latex_template,
     get_latex_templates_list,
+    read_pdf,
 )
 from .web_search import web_search, tavily_web_search, exa_web_search, brave_web_search
 from .visit_webpage import visit_webpage
@@ -37,4 +38,5 @@ __all__ = [
     "score_research_proposals",
     "review_pdf_paper",
     "download_pdf_paper",
+    "read_pdf",
 ]

academia_mcp/tools/latex.py

@@ -7,6 +7,7 @@ from pathlib import Path
 
 
 from academia_mcp.files import get_workspace_dir, DEFAULT_LATEX_TEMPLATES_DIR_PATH
+from academia_mcp.pdf import parse_pdf_file
 
 
 def get_latex_templates_list() -> str:
@@ -118,9 +119,11 @@ def compile_latex_from_str(
             try:
                 subprocess.run(
                     [
-                        "pdflatex",
+                        "latexmk",
+                        "-pdf",
                         "-interaction=nonstopmode",
                         "-file-line-error",
+                        "-diagnostics",
                         tex_filename,
                     ],
                     cwd=str(temp_dir_path),
@@ -133,13 +136,10 @@ def compile_latex_from_str(
                 return f"Compilation timed out after {timeout} seconds"
             except subprocess.CalledProcessError as e:
                 combined_output = (e.stdout or "") + "\n" + (e.stderr or "")
-                error_lines = [
-                    line
-                    for line in combined_output.split("\n")
-                    if ("error" in line.lower() or "!" in line)
-                ]
-                if error_lines:
-                    return "Compilation failed. LaTeX errors:\n" + "\n".join(error_lines)
+                log_path = temp_dir_path / "temp.log"
+                if log_path.exists():
+                    log_content = log_path.read_text(encoding="utf-8", errors="ignore")
+                    combined_output = combined_output + "\n\ntemp.log content:\n" + log_content
                 return f"Compilation failed. Full LaTeX output:\n{combined_output}"
 
             pdf_path = temp_dir_path / pdf_filename
@@ -154,3 +154,16 @@ def compile_latex_from_str(
             )
     except Exception as e:
         return f"Compilation failed due to an unexpected error: {e}"
+
+
+def read_pdf(pdf_path: str) -> str:
+    """
+    Read a PDF file to text from the file system.
+
+    Args:
+        pdf_path: The path to the pdf file in the working directory.
+
+    Returns a JSON-serialized list of strings where each string is a page of the pdf file.
+    """
+    full_path = Path(get_workspace_dir()) / pdf_path
+    return json.dumps(parse_pdf_file(full_path))

academia_mcp/tools/review.py

@@ -131,8 +131,10 @@ Return the result as a JSON object in the following format:
     "limitations": "Limitations of the paper",
     "overall": "Number + short description",
     "confidence": "Number + short description",
-    "format_issues": "Format issues",
+    "format_issues": "Format issues"
 }
+
+Always produce a correct JSON object.
 """
 
 

{academia_mcp-1.7.3.dist-info → academia_mcp-1.8.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: academia-mcp
-Version: 1.7.3
+Version: 1.8.0
 Summary: MCP server that provides different tools to search for scientific publications
 Author-email: Ilya Gusev <phoenixilya@gmail.com>
 Project-URL: Homepage, https://github.com/IlyaGusev/academia_mcp

{academia_mcp-1.7.3.dist-info → academia_mcp-1.8.0.dist-info}/RECORD

@@ -4,26 +4,26 @@ academia_mcp/files.py,sha256=tvt3OPr5q6pAPCZ0XvRHHL9ZWuTXINRZvqjeRFmx5YE,815
 academia_mcp/llm.py,sha256=E0TjWUCjo2q3lONyWMxdppX72m6BdCjsZk-vFLRvGyo,1003
 academia_mcp/pdf.py,sha256=9PlXzHGhb6ay3ldbTdxCcTWvH4TkET3bnb64mgoh9i0,1273
 academia_mcp/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-academia_mcp/server.py,sha256=ZAd-sunkEkka6snOlzgLCMaIQCzstiXP1pFlo20oyvA,3195
+academia_mcp/server.py,sha256=h6mhYHnWxIROhFS9D4E8bQZTvtEv6bYBx3EikQMScDE,3239
 academia_mcp/utils.py,sha256=P9U3RjYzcztE0KxXvJSy5wSBaUg2CM9tpByljYrsrl4,4607
 academia_mcp/latex_templates/agents4science_2025/agents4science_2025.sty,sha256=hGcEPCYBJS4vdhWvN_yEaJC4GvT_yDroI94CfY2Oguk,12268
 academia_mcp/latex_templates/agents4science_2025/agents4science_2025.tex,sha256=Tl1QkHXHRopw9VEfWrD3Layr5JP_0gIzVQjL4KXIWqc,15814
-academia_mcp/tools/__init__.py,sha256=nzMOzrIPVSXA3LQa02GPeX9SfAmg9f6_eZY97ALLNs4,1245
+academia_mcp/tools/__init__.py,sha256=9_fyy1OjMh8AAElBU-KF78rF6WPEJruqAxGZxbGfq6Q,1275
 academia_mcp/tools/anthology_search.py,sha256=rhFpJZqGLABgr0raDuH0CARBiAJNJtEI4dlMrKNHfDQ,7669
 academia_mcp/tools/arxiv_download.py,sha256=gBY0_Kz0yGtVkLMwn6GrAyfBjovZVgcSMuyy67p65Cw,10474
 academia_mcp/tools/arxiv_search.py,sha256=pzM18qrF3QL03A53w003kE7hQi3s3QKtjgw0m7K88UY,8355
 academia_mcp/tools/bitflip.py,sha256=eihmNk_C_8ZkBcjtJYH6MvZ0rItgIlvHHA0eGLxsvRs,12276
 academia_mcp/tools/document_qa.py,sha256=t9mygYQ7AFIAPiha1nZ-y043luQlkTCBdWb_SDnzEsE,2444
 academia_mcp/tools/hf_datasets_search.py,sha256=KiBkqT4rXjEN4oc1AWZOPnqN_Go90TQogY5-DUm3LQo,2854
-academia_mcp/tools/latex.py,sha256=llxxjBMHzDX4iNMeJSLuiP_sXT4umtYVyyhfZq2derM,5936
+academia_mcp/tools/latex.py,sha256=YzXS1mWBWSLm0ta35z9r8IBw36MkDAhCZR73-yxBVL0,6384
 academia_mcp/tools/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-academia_mcp/tools/review.py,sha256=LbebOHGs76qoSgWvTQ9Uj1fvmjc2eSBudX6n_zCINYI,10247
+academia_mcp/tools/review.py,sha256=9lMMELiRNVpiETqtFEHk551LaFuf1LYx0gXD5Sn7Ve0,10285
 academia_mcp/tools/s2_citations.py,sha256=XZ3a4rsovAiI_D_kIy0GddRHSjpC5Fa_CS8dmB9Qftg,4902
 academia_mcp/tools/visit_webpage.py,sha256=OZdqDkVPIbANyFw5o5jIjU5Rr_dolxrGDs63Ud-GmRM,1966
 academia_mcp/tools/web_search.py,sha256=mobKm4iqKppn8pduZYMzWRo1MQBjkAqmMtrFLI5XY2Y,6296
-academia_mcp-1.7.3.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-academia_mcp-1.7.3.dist-info/METADATA,sha256=uSv_PP7sCjZUnLsGNBigsa0zd-SNkK3ohtsqCizdobg,3714
-academia_mcp-1.7.3.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-academia_mcp-1.7.3.dist-info/entry_points.txt,sha256=gxkiKJ74w2FwJpSECpjA3XtCfI5ZfrM6N8cqnwsq4yY,51
-academia_mcp-1.7.3.dist-info/top_level.txt,sha256=CzGpRFsRRJRqWEb1e3SUlcfGqRzOxevZGaJWrtGF8W0,13
-academia_mcp-1.7.3.dist-info/RECORD,,
+academia_mcp-1.8.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+academia_mcp-1.8.0.dist-info/METADATA,sha256=JXEcHr35uJesDQKJ8mVRVRibsMoUAsL-DDozz-NJlAk,3714
+academia_mcp-1.8.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+academia_mcp-1.8.0.dist-info/entry_points.txt,sha256=gxkiKJ74w2FwJpSECpjA3XtCfI5ZfrM6N8cqnwsq4yY,51
+academia_mcp-1.8.0.dist-info/top_level.txt,sha256=CzGpRFsRRJRqWEb1e3SUlcfGqRzOxevZGaJWrtGF8W0,13
+academia_mcp-1.8.0.dist-info/RECORD,,