TwoPy 0.3.4__py3-none-any.whl → 0.3.6__py3-none-any.whl

twopy/converted.py

@@ -234,7 +234,7 @@ def load_converted_recording(
         if len(movie_shape) != 3:
             msg = f"aligned movie shape must have 3 dimensions: {movie_shape}"
             raise ValueError(msg)
-        movie_shape_3d = cast(tuple[int, int, int], movie_shape)
+        movie_shape_3d = movie_shape
 
         recording = RecordingData(
             path=data_path,

twopy/napari/empty_state.py

@@ -85,10 +85,10 @@ def show_empty_viewer_message(
     overlay.text = empty_viewer_message(update_command=update_command)
     overlay.visible = True
     overlay.position = "top_center"
-    overlay.font_size = 13
-    overlay.color = "white"
-    overlay.box = True
-    overlay.box_color = (0.0, 0.0, 0.0, 0.65)
+    overlay.font_size = 18
+    overlay.color = "#c8cdd3"
+    overlay.box = False
+    overlay.box_color = (0.0, 0.0, 0.0, 0.0)
 
 
 def hide_empty_viewer_message(viewer: object) -> None:

twopy/napari/protocols.py

@@ -80,6 +80,24 @@ class NapariViewer(Protocol):
         """
         ...
 
+    def reset_view(
+        self,
+        *,
+        margin: float = 0.05,
+        reset_camera_angle: bool = True,
+    ) -> None:
+        """Fit visible layers into the current viewer canvas.
+
+        Args:
+            margin: Fractional padding around visible layer extents.
+            reset_camera_angle: Whether to reset camera orientation as well as
+                zoom and pan.
+
+        Returns:
+            None.
+        """
+        ...
+
 
 class NapariLayerWithData(Protocol):
     """Small protocol for napari layers that expose array-like data.

twopy/napari/version_check.py

@@ -137,7 +137,12 @@ def check_for_update(
     """
     checked_now = _utc(now)
     cache = read_version_check_cache(state_file=state_file)
-    if _cache_is_fresh(cache, now=checked_now, max_age=max_age):
+    if _cache_is_fresh(
+        cache,
+        now=checked_now,
+        max_age=max_age,
+        current_version=current_version,
+    ):
         return _notice_from_cache(current_version, cache)
 
     try:
@@ -243,6 +248,7 @@ def _cache_is_fresh(
     *,
     now: datetime,
     max_age: timedelta,
+    current_version: str,
 ) -> bool:
     """Return whether the cache is young enough to skip a network check."""
     if cache is None:
@@ -250,6 +256,13 @@ def _cache_is_fresh(
     checked_at = _parse_cached_datetime(cache.checked_at)
     if checked_at is None:
         return False
+    try:
+        current = Version(current_version)
+        latest = Version(cache.latest_version)
+    except InvalidVersion:
+        return False
+    if latest < current:
+        return False
     return now - checked_at <= max_age
 
 

twopy/napari/viewer.py

@@ -17,6 +17,7 @@ from typing import TYPE_CHECKING, Protocol, cast
 
 import numpy as np
 import numpy.typing as npt
+from qtpy.QtCore import QTimer
 
 from twopy._version import __version__
 from twopy.napari.empty_state import (
@@ -368,6 +369,11 @@ def add_prepared_recording_to_viewer(
         )
         set_labels_brush_size(roi_layer, brush_size=6)
 
+    QTimer.singleShot(
+        0,
+        lambda: viewer.reset_view(margin=0.05, reset_camera_angle=False),
+    )
+
     from twopy.napari.types import NapariRecordingView
 
     return NapariRecordingView(
@@ -398,7 +404,10 @@ def create_viewer() -> NapariViewer:
     """
     import napari
 
-    viewer = cast(NapariViewer, napari.Viewer(title=APPLICATION_TITLE))
+    viewer = cast(
+        NapariViewer,
+        napari.Viewer(title=APPLICATION_TITLE, show_welcome_screen=False),
+    )
     _set_application_icon(viewer)
     show_empty_viewer_message(viewer)
     return viewer

{twopy-0.3.4.dist-info → twopy-0.3.6.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: twopy
-Version: 0.3.4
+Version: 0.3.6
 Summary: Two-photon imaging analysis tool with a napari interface.
 Author-email: Gustavo Madeira Santana <fromweb1@gumadeiras.com>
 License-Expression: MIT

{twopy-0.3.4.dist-info → twopy-0.3.6.dist-info}/RECORD

@@ -7,7 +7,7 @@ twopy/api.py,sha256=lveeoPjg-Yy4wWdepy1pnekZj77D-Y4FkvyL6smXgp4,3005
 twopy/cache_inventory.py,sha256=LJTWotkMASq9o1ebAtXsDb13PY6zYhFEThmQPZErrn8,23241
 twopy/config.example.yml,sha256=_HymfhzjWSPQc3gscTOAnvlt6ijLHvJ7NWHmeDQBZ74,2764
 twopy/config.py,sha256=91ZGMTtOaJwSiE7mBoMLTF_VxbF2Hntp9gLawMLiHGQ,24460
-twopy/converted.py,sha256=Bmi_bBYoqA-W-T8JEj8i3RGD6Xw5DTkwdi5SNYjLfCU,24920
+twopy/converted.py,sha256=ff8Zh-E5aTkBFeq5LB4N6APKleSHGs8vdNY8pfCejWQ,24892
 twopy/filenames.py,sha256=uEjiBRygoojU1upQ-HldrtNYZpgq3Mv0gp0VxlWGbnM,1487
 twopy/frame_ranges.py,sha256=ETREkQxzuof_EgomR-lV75rjSPLObJlss91GENcwxhY,1368
 twopy/hdf5_utils.py,sha256=f_lddPqI2X-PNjGXWVSbLL6LFpr14ClFqY6zprMsoGo,3816
@@ -96,7 +96,7 @@ twopy/napari/database_search.py,sha256=zcLkhXY9CierCHkcgSPdBsuDtVoz9MjXRWu5ERFpA
 twopy/napari/dims.py,sha256=veHSbVuiro1eoR25KKfJg9DmpMP_wnoY0QeTXzbcM64,3495
 twopy/napari/display.py,sha256=Gx-qMjvimDaZ1yueFKJ55b-5h7zkrx4fkxrZWvNxwjA,3362
 twopy/napari/display_paths.py,sha256=03-Ve2DFs6YNxv8IP41hP0nENcZ7eyGmIOpMLwgfnSI,12503
-twopy/napari/empty_state.py,sha256=z-htfDomWZKzKSkBOutE34VpsW1pGZPCV-8WKnLI2EU,4617
+twopy/napari/empty_state.py,sha256=qBPX92hLeaMCmSqUtLdeBsMAwPw072U4hQnVIrxvTpk,4619
 twopy/napari/errors.py,sha256=hpHSpfnm2ZDAqyMp8kElsR9bDXCDw6xMZyq0ebRwx4s,824
 twopy/napari/interactive.py,sha256=s7scFUvZRsHCmbYx6QsvHrgk3j6rDuIgGN-mdqvFvpE,15723
 twopy/napari/latest_worker.py,sha256=3Sv4IrYRaUuALX2LY0LnqpBp6ABH39oq2y3DcRp0IQE,5077
@@ -110,7 +110,7 @@ twopy/napari/loading.py,sha256=P5sXn6LZYzz9m5dRCvxh7vB5NkZuHU97lj8G4IKl1Q8,30638
 twopy/napari/movie.py,sha256=BAwniak4TR-mk9gnXlwivfPRMb4jhrhQ3EwvgdO2MEY,2344
 twopy/napari/output_routing.py,sha256=Xy-r_FyWY59tmorp_ouHm_kRMjEXFKtfNsdqCIkYgCs,3953
 twopy/napari/paths.py,sha256=7UTg9DuPnM9RHfoCK1OQdMDJAFarh9f9pTdj8bd3RB0,5310
-twopy/napari/protocols.py,sha256=mA57VWatG4CPm2hSJWXtOx4Fch5QzchL3XnTe-1Y-Bk,3521
+twopy/napari/protocols.py,sha256=ZZKBrihoXNzBYdPp7z7dB9aetZsHrcWwYEdJ40w_w08,3968
 twopy/napari/responses.py,sha256=5pehTKhX0vXt243uH8RorHO0Mnwc_AhTGFujJeL8hoQ,11803
 twopy/napari/roi.py,sha256=C74NY22w1ZwFSikb3IWXOXXv3yQv91KBGBQ4TQqYCVE,14901
 twopy/napari/roi_signatures.py,sha256=f7agEqdEKlRYFZBTV6zTDobOSpKy5A3FpP0_HYdg_7o,618
@@ -120,8 +120,8 @@ twopy/napari/state.py,sha256=P4QD9XZdeHvm_Ebjn7nOqV49gmDUTqBr0kSlOSZruhU,7337
 twopy/napari/text.py,sha256=amsxpoq4zMj5sHnNIiWpcVS5sS2KzIh7d1vQD2C4paE,2127
 twopy/napari/trial_timeline.py,sha256=oZSrYDEWfV60mrI9yekc813cc2W8-8EQZVwb7EUQn74,24349
 twopy/napari/types.py,sha256=yBHw9FSWFdjf8Xp-bK2SKBlH2BW7nIhUgPZceG63amc,1201
-twopy/napari/version_check.py,sha256=a4BQJGGVCJw1tym9fCNx12_-TmNvVaATiskyVtjaSAQ,8439
-twopy/napari/viewer.py,sha256=I5V7VqPtN3m5grByT-RI8hkQX2DHXv2UAvu-EiCX4ko,21883
+twopy/napari/version_check.py,sha256=hOBIfVb2_YwFqGh9LxwCDaYfTv4oOIqGqZqfDEFCG-A,8730
+twopy/napari/viewer.py,sha256=FIIRjPmuBkgQshTNFVXzXQFtubgnMI2KOs4eAiXhMq4,22079
 twopy/napari/assets/twopy-app-icon-128.png,sha256=93BO_VF7_CsUCRKpd5OrIid0ax3eV1vUciUtc8UyjP8,10629
 twopy/napari/assets/twopy-app-icon-16.png,sha256=uTRc_JlpzN1jNrWAu4Zi_xUd2nTvNa9TI--yzkGoJZs,1284
 twopy/napari/assets/twopy-app-icon-256.png,sha256=mR3Sb0TUGoLQn-nz7hhRNjMyhefJsYPwvYCjFopB2_A,28009
@@ -180,8 +180,8 @@ twopy/parity/psycho5.py,sha256=Xg7Q8Ipyv6hH9AXYKLxU0cLx9z10uWDLg7PNxT-rDyk,13908
 twopy/parity/roi.py,sha256=Q3deH6xRGCmTXASTlPHQgzH7FhBWkdjRUgh9skyS8j0,4975
 twopy/parity/roi_extraction.py,sha256=Z-ABVSB4Z6IUqZMWU1bq6Ko1tGP4uTdzk3As0gHaHTA,10372
 twopy/parity/saved_analysis.py,sha256=Kbpaxh1zapR5XxnHEkin8r4mEZX8kEtonudeZcwI7Dw,5597
-twopy-0.3.4.dist-info/METADATA,sha256=Bi5T04QAsFRF8ogd8KtVwiUoD8g9JXoYsqYAVwbH9_M,4143
-twopy-0.3.4.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
-twopy-0.3.4.dist-info/entry_points.txt,sha256=RnmRKOxEv5ZwLN-dArdSB678gM2iNxbE30VwRpwhp8o,44
-twopy-0.3.4.dist-info/top_level.txt,sha256=8MB6QGpnHMTeTfEE543DOr676HcemeoELujrJkFcvak,6
-twopy-0.3.4.dist-info/RECORD,,
+twopy-0.3.6.dist-info/METADATA,sha256=8YmH-hI7C1Bz1ZkRgr190obrkmVPYrIFoAnaOfkdZfA,4143
+twopy-0.3.6.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
+twopy-0.3.6.dist-info/entry_points.txt,sha256=RnmRKOxEv5ZwLN-dArdSB678gM2iNxbE30VwRpwhp8o,44
+twopy-0.3.6.dist-info/top_level.txt,sha256=8MB6QGpnHMTeTfEE543DOr676HcemeoELujrJkFcvak,6
+twopy-0.3.6.dist-info/RECORD,,