TB2J 0.9.9rc11__py3-none-any.whl → 0.9.9rc12__py3-none-any.whl

TB2J/rotate_atoms.py

@@ -15,6 +15,7 @@ def rotate_atom_xyz(atoms, noncollinear=False):
     will be generated.
     """
 
+    yield atoms
     rotation_axes = [(1, 0, 0), (0, 1, 0)]
     if noncollinear:
         rotation_axes += [(1, 1, 0), (1, 0, 1), (0, 1, 1)]
@@ -23,6 +24,7 @@ def rotate_atom_xyz(atoms, noncollinear=False):
         rotated_atoms = copy.deepcopy(atoms)
         rotated_atoms.rotate(90, axis, rotate_cell=True)
         yield rotated_atoms
+    yield atoms 
 
 
 def rotate_atom_spin_one_rotation(atoms, Rotation):
@@ -109,7 +111,5 @@ def rotate_xyz(fname, ftype="xyz", noncollinear=False):
     rotated = rotate_atom_xyz(atoms, noncollinear=noncollinear)
 
     for i, rotated_atoms in enumerate(rotated):
-        write(f"atoms_{i+1}.{ftype}", rotated_atoms)
-    write(f"atoms_0.{ftype}", atoms)
-
+        write(f"atoms_{i}.{ftype}", rotated_atoms)
     print(f"The output has been written to the atoms_i.{ftype} files. atoms_0.{ftype} contains the reference structure.")

{tb2j-0.9.9rc11.dist-info → tb2j-0.9.9rc12.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: TB2J
-Version: 0.9.9rc11
+Version: 0.9.9rc12
 Summary: TB2J: First principle to Heisenberg exchange J using tight-binding Green function method
 Author: Xu He
 Author-email: mailhexu@gmail.com

{tb2j-0.9.9rc11.dist-info → tb2j-0.9.9rc12.dist-info}/RECORD

@@ -28,7 +28,7 @@ TB2J/orbmap.py,sha256=XLQjKMxCy2eADaM5eb2F_zG08V7lzpXJxp5uEtTeVYI,7194
 TB2J/pauli.py,sha256=ESpAhk6LG5ugzuW1YFUTqiDxcg-pQ7wNnzR2FtUnvKM,5295
 TB2J/pert.py,sha256=RaCJfewl0doht4cjAnzzGKe-uj2le4aqe0iPKFrq9fo,1192
 TB2J/plot.py,sha256=AnFIFWE2vlmj7Z6f_7-dX_O1stJN-qbuiurPj43dUCM,4104
-TB2J/rotate_atoms.py,sha256=Dwptn-wdDW4zYzjYb95yxTzuZOe9WPuLjh3d3-YcSs0,3277
+TB2J/rotate_atoms.py,sha256=53UuQr5IoQu5g4klQb_aP4WrDykGkBZTkGgdS-O-Q80,3270
 TB2J/rotate_siestaDM.py,sha256=I4ytO8uFP8_GFyBs9-zMdiMSZS3Y3lj2dSLfNBNI2ZY,1078
 TB2J/sisl_wrapper.py,sha256=A5x1-tt8efUSPeGY5wM5m6-pJYQFXTCzQHVqD6RBa2g,14792
 TB2J/symmetrize_J.py,sha256=IypvLL0JxExq-cmqc4o0nLL8psE7OC9ijj9YMcsqJeA,4487
@@ -80,19 +80,19 @@ TB2J/spinham/supercell.py,sha256=y17uUC6r3gQb278FhxIW4CABihfLTvKFj6flyXrCPR8,122
 TB2J/wannier/__init__.py,sha256=7ojCbM84PYv1X1Tbo4NHI-d3gWmQsZB_xiYqbfxVV1E,80
 TB2J/wannier/w90_parser.py,sha256=dbd63LuKyv2DVUzqRINGsbDzEsOxsQyE8_Ear_LQIRg,4620
 TB2J/wannier/w90_tb_parser.py,sha256=qt8pnuprmPp9iIAYwPkPbmEzk6ZPgMq2xognoQp7vwc,4610
-tb2j-0.9.9rc11.data/scripts/TB2J_downfold.py,sha256=i4BVqnpDdgrX_amookVWeLGefGBn-qeAutWiwuY9SfQ,2099
-tb2j-0.9.9rc11.data/scripts/TB2J_eigen.py,sha256=Qs9v2hnMm2Tpfoa4h53muUKty2dZjwx8948MBoQooNg,1128
-tb2j-0.9.9rc11.data/scripts/TB2J_magnon.py,sha256=q7UwAmorRcFNk4tfE7gl_ny05l6p7pbD9Wm_LkIpKEw,3101
-tb2j-0.9.9rc11.data/scripts/TB2J_magnon_dos.py,sha256=TMXQvD2dIbO5FZ4tUMmxJgCgH2O2hDAPUNfEKO4z-x4,110
-tb2j-0.9.9rc11.data/scripts/TB2J_merge.py,sha256=y834SF4rIRn1L1ptkhczvavQpC-8Px6DTmDOOSaq_DE,1854
-tb2j-0.9.9rc11.data/scripts/TB2J_rotate.py,sha256=zgiDFuYZNmzKK0rwDmTaYD2OpRlmKA_VGeBx83w2Xwc,873
-tb2j-0.9.9rc11.data/scripts/TB2J_rotateDM.py,sha256=kCvF7gotuqAX1VnJ06cwfVm7RrhrdtiV5v7d9P2Pn_E,567
-tb2j-0.9.9rc11.data/scripts/abacus2J.py,sha256=r6P9upWah9Dpeqli-oLD7a1wnQc8rvHT6ed0qw4lUYE,1634
-tb2j-0.9.9rc11.data/scripts/siesta2J.py,sha256=Px6eB4OOa00hoCzCoXcuNGiH025udgxudkDfuzGYMRE,2159
-tb2j-0.9.9rc11.data/scripts/wann2J.py,sha256=Z5MSAtS5i5OrPlwDURnPr87dtYF4GbH_NixUi6WYsA8,3043
-tb2j-0.9.9rc11.dist-info/licenses/LICENSE,sha256=CbZI-jyRTjiqIcWa244cRSHJdjjtUNqGR4HeJkgEwJw,1332
-tb2j-0.9.9rc11.dist-info/METADATA,sha256=abMsJvPl5oFwGXxPYnh-Pu1s8IqeEc7iD8a9BMkspa4,1689
-tb2j-0.9.9rc11.dist-info/WHEEL,sha256=ck4Vq1_RXyvS4Jt6SI0Vz6fyVs4GWg7AINwpsaGEgPE,91
-tb2j-0.9.9rc11.dist-info/entry_points.txt,sha256=Hdz1WC9waUzyFVmowKnbbZ6j-J4adHh_Ko6JpxGYAtE,131
-tb2j-0.9.9rc11.dist-info/top_level.txt,sha256=whYa5ByLYhl5XnTPBHSWr-IGD6VWmr5Ql2bye2qwV_s,5
-tb2j-0.9.9rc11.dist-info/RECORD,,
+tb2j-0.9.9rc12.data/scripts/TB2J_downfold.py,sha256=i4BVqnpDdgrX_amookVWeLGefGBn-qeAutWiwuY9SfQ,2099
+tb2j-0.9.9rc12.data/scripts/TB2J_eigen.py,sha256=Qs9v2hnMm2Tpfoa4h53muUKty2dZjwx8948MBoQooNg,1128
+tb2j-0.9.9rc12.data/scripts/TB2J_magnon.py,sha256=q7UwAmorRcFNk4tfE7gl_ny05l6p7pbD9Wm_LkIpKEw,3101
+tb2j-0.9.9rc12.data/scripts/TB2J_magnon_dos.py,sha256=TMXQvD2dIbO5FZ4tUMmxJgCgH2O2hDAPUNfEKO4z-x4,110
+tb2j-0.9.9rc12.data/scripts/TB2J_merge.py,sha256=y834SF4rIRn1L1ptkhczvavQpC-8Px6DTmDOOSaq_DE,1854
+tb2j-0.9.9rc12.data/scripts/TB2J_rotate.py,sha256=zgiDFuYZNmzKK0rwDmTaYD2OpRlmKA_VGeBx83w2Xwc,873
+tb2j-0.9.9rc12.data/scripts/TB2J_rotateDM.py,sha256=kCvF7gotuqAX1VnJ06cwfVm7RrhrdtiV5v7d9P2Pn_E,567
+tb2j-0.9.9rc12.data/scripts/abacus2J.py,sha256=r6P9upWah9Dpeqli-oLD7a1wnQc8rvHT6ed0qw4lUYE,1634
+tb2j-0.9.9rc12.data/scripts/siesta2J.py,sha256=Px6eB4OOa00hoCzCoXcuNGiH025udgxudkDfuzGYMRE,2159
+tb2j-0.9.9rc12.data/scripts/wann2J.py,sha256=Z5MSAtS5i5OrPlwDURnPr87dtYF4GbH_NixUi6WYsA8,3043
+tb2j-0.9.9rc12.dist-info/licenses/LICENSE,sha256=CbZI-jyRTjiqIcWa244cRSHJdjjtUNqGR4HeJkgEwJw,1332
+tb2j-0.9.9rc12.dist-info/METADATA,sha256=wQLym2swXqf-csGvi6aRpD3180BzMAOVwQZhbu9vMfY,1689
+tb2j-0.9.9rc12.dist-info/WHEEL,sha256=DnLRTWE75wApRYVsjgc6wsVswC54sMSJhAEd4xhDpBk,91
+tb2j-0.9.9rc12.dist-info/entry_points.txt,sha256=Hdz1WC9waUzyFVmowKnbbZ6j-J4adHh_Ko6JpxGYAtE,131
+tb2j-0.9.9rc12.dist-info/top_level.txt,sha256=whYa5ByLYhl5XnTPBHSWr-IGD6VWmr5Ql2bye2qwV_s,5
+tb2j-0.9.9rc12.dist-info/RECORD,,

{tb2j-0.9.9rc11.dist-info → tb2j-0.9.9rc12.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.0.0)
+Generator: setuptools (80.4.0)
 Root-Is-Purelib: true
 Tag: py3-none-any