SURE-tools 2.4.5__py3-none-any.whl → 2.4.13__py3-none-any.whl

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Files changed (10) hide show
  1. SURE/EfficientTranscriptomeDecoder.py +607 -0
  2. SURE/SimpleTranscriptomeDecoder.py +567 -0
  3. SURE/TranscriptomeDecoder.py +273 -311
  4. SURE/__init__.py +6 -1
  5. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/METADATA +1 -1
  6. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/RECORD +10 -8
  7. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/WHEEL +0 -0
  8. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/entry_points.txt +0 -0
  9. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/licenses/LICENSE +0 -0
  10. {sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/top_level.txt +0 -0
SURE/__init__.py CHANGED
@@ -2,6 +2,8 @@ from .SURE import SURE
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  from .DensityFlow import DensityFlow
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  from .PerturbE import PerturbE
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  from .TranscriptomeDecoder import TranscriptomeDecoder
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+ from .SimpleTranscriptomeDecoder import SimpleTranscriptomeDecoder
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+ from .EfficientTranscriptomeDecoder import EfficientTranscriptomeDecoder
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  from . import utils
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  from . import codebook
@@ -12,5 +14,8 @@ from . import flow
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  from . import perturb
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  from . import PerturbE
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  from . import TranscriptomeDecoder
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+ from . import SimpleTranscriptomeDecoder
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+ from . import EfficientTranscriptomeDecoder
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- __all__ = ['SURE', 'DensityFlow', 'PerturbE', 'TranscriptomeDecoder', 'flow', 'perturb', 'atac', 'utils', 'codebook']
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+ __all__ = ['SURE', 'DensityFlow', 'PerturbE', 'TranscriptomeDecoder', 'SimpleTranscriptomeDecoder',
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+ 'EfficientTranscriptomeDecoder', 'flow', 'perturb', 'atac', 'utils', 'codebook']
{sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 2.4.5
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+ Version: 2.4.13
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-2.4.5.dist-info → sure_tools-2.4.13.dist-info}/RECORD RENAMED
@@ -1,8 +1,10 @@
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  SURE/DensityFlow.py,sha256=YvaE9aPbAC2U7WhTye5i2AMtcw0BI_qS3gv9SP4aE0k,56676
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+ SURE/EfficientTranscriptomeDecoder.py,sha256=OkarjfgVGr5Z5obodoK6W0Y4ePMuejctzfI6XMTj2x4,24409
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  SURE/PerturbE.py,sha256=DxEp-qef--x8-GMZdPfBf8ts8UDDc34h2P5AnpqZ-YM,52265
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  SURE/SURE.py,sha256=MXs7iuvcj-lU4dJ_MwKegpL2Rqk2HB4eFfAgHRA3RtA,47744
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- SURE/TranscriptomeDecoder.py,sha256=fjTl2wC-nGTdbQGgFDbTmWYI8RoEg6J4cHPmoUoJJfI,21286
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- SURE/__init__.py,sha256=pNSGQ4BMqMXBAPHpFOYNB8_0vFW-RqPy3rr5fvdEEyU,473
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+ SURE/SimpleTranscriptomeDecoder.py,sha256=mLgYYipfRrmuXlpoaxLPfJS009OVwyshdL3nXTJygIE,22285
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+ SURE/TranscriptomeDecoder.py,sha256=n2tVB8hNVLwSQ1G1Jpd6WzMl2Iw63eK0_Ujk9d48SJY,20982
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+ SURE/__init__.py,sha256=q4So8LMTCc-SLbt5EBUxP2vWU0f-mmYK9JImh-26Nec,773
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  SURE/assembly/__init__.py,sha256=jxZLURXKPzXe21LhrZ09LgZr33iqdjlQy4oSEj5gR2Q,172
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  SURE/assembly/assembly.py,sha256=6IMdelPOiRO4mUb4dC7gVCoF1Uvfw86-Map8P_jnUag,21477
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  SURE/assembly/atlas.py,sha256=ALjmVWutm_tOHTcT1aqOxmuCEQw-XzrtDoMCV_8oXLk,21794
@@ -19,9 +21,9 @@ SURE/utils/__init__.py,sha256=YF5jB-PAHJQ40OlcZ7BCZbsN2q1JKuPT6EppilRXQqM,680
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  SURE/utils/custom_mlp.py,sha256=Rn_PQouxPMSda-KKBYrwVVv3GFFuUmCLxp8cV5LszZo,10580
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  SURE/utils/queue.py,sha256=E_5PA5EWcBoGAZj8BkKQnkCK0p4C-4-xcTPqdIXaPXU,1892
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  SURE/utils/utils.py,sha256=IUHjDDtYaAYllCWsZyIzqQwaLul6fJRvHRH4vIYcR-c,8462
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- sure_tools-2.4.5.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
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- sure_tools-2.4.5.dist-info/METADATA,sha256=2GjCK_HUQ_Vs6b8AT2PIelOadhiVeOakI8B_OqbRyi0,2677
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- sure_tools-2.4.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- sure_tools-2.4.5.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
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- sure_tools-2.4.5.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
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- sure_tools-2.4.5.dist-info/RECORD,,
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+ sure_tools-2.4.13.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
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+ sure_tools-2.4.13.dist-info/METADATA,sha256=pTQN0mFGtp30RlvPuIoOk3ttz8qZ7e91Q63e9njErzo,2678
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+ sure_tools-2.4.13.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ sure_tools-2.4.13.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
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+ sure_tools-2.4.13.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
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+ sure_tools-2.4.13.dist-info/RECORD,,