SURE-tools 2.4.2__py3-none-any.whl → 2.4.13__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.

This version of SURE-tools might be problematic. Click here for more details.

Files changed (10) hide show
  1. SURE/EfficientTranscriptomeDecoder.py +607 -0
  2. SURE/SimpleTranscriptomeDecoder.py +567 -0
  3. SURE/TranscriptomeDecoder.py +273 -289
  4. SURE/__init__.py +6 -1
  5. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/METADATA +1 -1
  6. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/RECORD +10 -8
  7. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/WHEEL +0 -0
  8. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/entry_points.txt +0 -0
  9. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/licenses/LICENSE +0 -0
  10. {sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/top_level.txt +0 -0
SURE/__init__.py CHANGED
@@ -2,6 +2,8 @@ from .SURE import SURE
2
2
  from .DensityFlow import DensityFlow
3
3
  from .PerturbE import PerturbE
4
4
  from .TranscriptomeDecoder import TranscriptomeDecoder
5
+ from .SimpleTranscriptomeDecoder import SimpleTranscriptomeDecoder
6
+ from .EfficientTranscriptomeDecoder import EfficientTranscriptomeDecoder
5
7
 
6
8
  from . import utils
7
9
  from . import codebook
@@ -12,5 +14,8 @@ from . import flow
12
14
  from . import perturb
13
15
  from . import PerturbE
14
16
  from . import TranscriptomeDecoder
17
+ from . import SimpleTranscriptomeDecoder
18
+ from . import EfficientTranscriptomeDecoder
15
19
 
16
- __all__ = ['SURE', 'DensityFlow', 'PerturbE', 'TranscriptomeDecoder', 'flow', 'perturb', 'atac', 'utils', 'codebook']
20
+ __all__ = ['SURE', 'DensityFlow', 'PerturbE', 'TranscriptomeDecoder', 'SimpleTranscriptomeDecoder',
21
+ 'EfficientTranscriptomeDecoder', 'flow', 'perturb', 'atac', 'utils', 'codebook']
{sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: SURE-tools
3
- Version: 2.4.2
3
+ Version: 2.4.13
4
4
  Summary: Succinct Representation of Single Cells
5
5
  Home-page: https://github.com/ZengFLab/SURE
6
6
  Author: Feng Zeng
{sure_tools-2.4.2.dist-info → sure_tools-2.4.13.dist-info}/RECORD RENAMED
@@ -1,8 +1,10 @@
1
1
  SURE/DensityFlow.py,sha256=YvaE9aPbAC2U7WhTye5i2AMtcw0BI_qS3gv9SP4aE0k,56676
2
+ SURE/EfficientTranscriptomeDecoder.py,sha256=OkarjfgVGr5Z5obodoK6W0Y4ePMuejctzfI6XMTj2x4,24409
2
3
  SURE/PerturbE.py,sha256=DxEp-qef--x8-GMZdPfBf8ts8UDDc34h2P5AnpqZ-YM,52265
3
4
  SURE/SURE.py,sha256=MXs7iuvcj-lU4dJ_MwKegpL2Rqk2HB4eFfAgHRA3RtA,47744
4
- SURE/TranscriptomeDecoder.py,sha256=z0NtjvpT1nN4H9WC97VJPWuTvqaZYn36MbpaIWjXgGU,20324
5
- SURE/__init__.py,sha256=pNSGQ4BMqMXBAPHpFOYNB8_0vFW-RqPy3rr5fvdEEyU,473
5
+ SURE/SimpleTranscriptomeDecoder.py,sha256=mLgYYipfRrmuXlpoaxLPfJS009OVwyshdL3nXTJygIE,22285
6
+ SURE/TranscriptomeDecoder.py,sha256=n2tVB8hNVLwSQ1G1Jpd6WzMl2Iw63eK0_Ujk9d48SJY,20982
7
+ SURE/__init__.py,sha256=q4So8LMTCc-SLbt5EBUxP2vWU0f-mmYK9JImh-26Nec,773
6
8
  SURE/assembly/__init__.py,sha256=jxZLURXKPzXe21LhrZ09LgZr33iqdjlQy4oSEj5gR2Q,172
7
9
  SURE/assembly/assembly.py,sha256=6IMdelPOiRO4mUb4dC7gVCoF1Uvfw86-Map8P_jnUag,21477
8
10
  SURE/assembly/atlas.py,sha256=ALjmVWutm_tOHTcT1aqOxmuCEQw-XzrtDoMCV_8oXLk,21794
@@ -19,9 +21,9 @@ SURE/utils/__init__.py,sha256=YF5jB-PAHJQ40OlcZ7BCZbsN2q1JKuPT6EppilRXQqM,680
19
21
  SURE/utils/custom_mlp.py,sha256=Rn_PQouxPMSda-KKBYrwVVv3GFFuUmCLxp8cV5LszZo,10580
20
22
  SURE/utils/queue.py,sha256=E_5PA5EWcBoGAZj8BkKQnkCK0p4C-4-xcTPqdIXaPXU,1892
21
23
  SURE/utils/utils.py,sha256=IUHjDDtYaAYllCWsZyIzqQwaLul6fJRvHRH4vIYcR-c,8462
22
- sure_tools-2.4.2.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
23
- sure_tools-2.4.2.dist-info/METADATA,sha256=gorPWZ40-GBJ3Rz6CH-eWZFz0ZKW8LacnDEJbg1cik4,2677
24
- sure_tools-2.4.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
25
- sure_tools-2.4.2.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
26
- sure_tools-2.4.2.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
27
- sure_tools-2.4.2.dist-info/RECORD,,
24
+ sure_tools-2.4.13.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
25
+ sure_tools-2.4.13.dist-info/METADATA,sha256=pTQN0mFGtp30RlvPuIoOk3ttz8qZ7e91Q63e9njErzo,2678
26
+ sure_tools-2.4.13.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
27
+ sure_tools-2.4.13.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
28
+ sure_tools-2.4.13.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
29
+ sure_tools-2.4.13.dist-info/RECORD,,