SURE-tools 2.1.33__py3-none-any.whl → 2.1.34__py3-none-any.whl

SURE/flow/flow_stats.py

@@ -8,26 +8,15 @@ class VectorFieldEval:
     def __init__(self):
         pass 
     
-    def directional_alignment(self, vectors, weighted=False):
-        if weighted:
-            return weighted_alignment(vectors=vectors)
-        else:
-            return directional_alignment(vectors=vectors)
+    def directional_alignment(self, vectors):
+        return weighted_alignment(vectors=vectors)
         
-    def flow_coherence(self, vectors, pca=False):
-        if pca:
-            return pca_based_coherence(vectors=vectors)
-        else:
-            return flow_coherence_index(vectors=vectors)
+    def flow_coherence(self, vectors):
+        return pca_based_coherence(vectors=vectors)
         
     def momentum_flow_metric(self, vectors, masses=None):
         return momentum_flow_metric(vectors=vectors, masses=masses)
-            
-    def multi_scale_coherence(self, vectors, positoins, scale_factors=[1.0, 0.5, 0.1]):
-        return multi_scale_coherence(vectors=vectors, positions=positoins, scale_factors=scale_factors)
-    
-    def vector_field_coherence_score(self, vectors, positions=None, weights=None):
-        return vector_field_coherence_score(vectors=vectors, positions=positions, weights=weights)
+
         
 def calculate_movement_stats(vectors):
     """

{sure_tools-2.1.33.dist-info → sure_tools-2.1.34.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: SURE-tools
-Version: 2.1.33
+Version: 2.1.34
 Summary: Succinct Representation of Single Cells
 Home-page: https://github.com/ZengFLab/SURE
 Author: Feng Zeng

{sure_tools-2.1.33.dist-info → sure_tools-2.1.34.dist-info}/RECORD

@@ -9,7 +9,7 @@ SURE/atac/utils.py,sha256=m4NYwpy9O5T1pXTzgCOCcmlwrC6GTi-cQ5sm2wZu2O8,4354
 SURE/codebook/__init__.py,sha256=2T5gjp8JIaBayrXAnOJYSebQHsWprOs87difpR1OPNw,243
 SURE/codebook/codebook.py,sha256=ZlN6gRX9Gj2D2u3P5KeOsbZri0MoMAiJo9lNeL-MK-I,17117
 SURE/flow/__init__.py,sha256=rsAjYsh1xVIrxBCuwOE0Q_6N5th1wBgjJceV0ABPG3c,183
-SURE/flow/flow_stats.py,sha256=3F3waCuEbIQ7bsiGga4cUvJphYdWA307SyGwEh8EzM8,10514
+SURE/flow/flow_stats.py,sha256=cBBsPEDpWNMpbzlyQ3f0385RSrX6_5RCH2caOyi4ihM,9908
 SURE/flow/plot_quiver.py,sha256=UbmuScUcgbQHeMmjKmgqxjrIjHhiHx0VWct16UMMwuE,8110
 SURE/perturb/__init__.py,sha256=ouxShhbxZM4r5Gf7GmKiutrsmtyq7QL8rHjhgF0BU08,32
 SURE/perturb/perturb.py,sha256=CqO3xPfNA3cG175tadDidKvGsTu_yKfJRRLn_93awKM,3303
@@ -17,9 +17,9 @@ SURE/utils/__init__.py,sha256=QJUOfrXzdWSmoM0P3LH8oKEHttzCWqpDy2UF0F0dtN4,673
 SURE/utils/custom_mlp.py,sha256=rHnx9jEef02zfCUdbYVCmbuHcDdIBmRgt__wpdpZvYg,8104
 SURE/utils/queue.py,sha256=E_5PA5EWcBoGAZj8BkKQnkCK0p4C-4-xcTPqdIXaPXU,1892
 SURE/utils/utils.py,sha256=IUHjDDtYaAYllCWsZyIzqQwaLul6fJRvHRH4vIYcR-c,8462
-sure_tools-2.1.33.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
-sure_tools-2.1.33.dist-info/METADATA,sha256=7YvSZWWRKzRPZeSR8LwyIlWP1AeT-jtYvnn4FAQFjvE,2651
-sure_tools-2.1.33.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-sure_tools-2.1.33.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
-sure_tools-2.1.33.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
-sure_tools-2.1.33.dist-info/RECORD,,
+sure_tools-2.1.34.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
+sure_tools-2.1.34.dist-info/METADATA,sha256=EV5AA3dO2YrSVqVC0wytPt0RkCIb7nuws0FSUhNcXuE,2651
+sure_tools-2.1.34.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+sure_tools-2.1.34.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
+sure_tools-2.1.34.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
+sure_tools-2.1.34.dist-info/RECORD,,