SURE-tools 2.1.19__py3-none-any.whl → 2.1.21__py3-none-any.whl

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Files changed (9) hide show
  1. SURE/PerturbFlow.py +1 -2
  2. SURE/SURE.py +0 -1
  3. SURE/utils/custom_mlp.py +3 -0
  4. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/METADATA +1 -1
  5. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/RECORD +9 -9
  6. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/WHEEL +0 -0
  7. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/entry_points.txt +0 -0
  8. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/licenses/LICENSE +0 -0
  9. {sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/top_level.txt +0 -0
SURE/PerturbFlow.py CHANGED
@@ -10,7 +10,7 @@ from torch.distributions.utils import logits_to_probs, probs_to_logits, clamp_pr
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  from torch.distributions import constraints
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  from torch.distributions.transforms import SoftmaxTransform
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- from .utils.custom_mlp import MLP, Exp
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+ from .utils.custom_mlp import MLP, Exp, ZeroBiasMLP
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  from .utils.utils import CustomDataset, CustomDataset2, CustomDataset4, tensor_to_numpy, convert_to_tensor
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@@ -204,7 +204,6 @@ class PerturbFlow(nn.Module):
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  post_act_fct=post_act_fct,
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  allow_broadcast=self.allow_broadcast,
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  use_cuda=self.use_cuda,
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- bias=False,
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  )
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  )
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SURE/SURE.py CHANGED
@@ -240,7 +240,6 @@ class SURE(nn.Module):
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  post_act_fct=post_act_fct,
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  allow_broadcast=self.allow_broadcast,
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  use_cuda=self.use_cuda,
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- bias=False,
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  )
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  self.decoder_concentrate = MLP(
SURE/utils/custom_mlp.py CHANGED
@@ -209,3 +209,6 @@ class MLP(nn.Module):
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  # pass through our sequential for the output!
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  def forward(self, *args, **kwargs):
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  return self.sequential_mlp.forward(*args, **kwargs)
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+
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+
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+
{sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 2.1.19
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+ Version: 2.1.21
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-2.1.19.dist-info → sure_tools-2.1.21.dist-info}/RECORD RENAMED
@@ -1,5 +1,5 @@
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- SURE/PerturbFlow.py,sha256=9mnIaM9zmFihG5clcPoXyL9nYeKIeuKvb_GHWaKvmGU,50957
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- SURE/SURE.py,sha256=6qjf9E9OMBkZQSNnmvornpEa4E203-_rtz5Hs8jNCJA,47472
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+ SURE/PerturbFlow.py,sha256=P5YebRbhyEIueyStdaMkFvLq43MJSBCcYd-pI09eTBQ,50938
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+ SURE/SURE.py,sha256=xMD6VBYsgk-bZ_xBWzpdGyxEAleonNRoPkZAxAX467s,47444
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  SURE/SURE2.py,sha256=8wlnMwb1xuf9QUksNkWdWx5ZWq-xIy9NLx8RdUnE82o,48501
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  SURE/__init__.py,sha256=NOJI_K-eCqPgStXXvgl3wIEMp6d8saMTDYLJ7Ga9MqE,293
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  SURE/assembly/__init__.py,sha256=jxZLURXKPzXe21LhrZ09LgZr33iqdjlQy4oSEj5gR2Q,172
@@ -16,12 +16,12 @@ SURE/flow/quiver.py,sha256=_euFqSaRrDoZ_oOabOx20LOoUTJ__XPhLW-vzLNQfAo,1859
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  SURE/perturb/__init__.py,sha256=ouxShhbxZM4r5Gf7GmKiutrsmtyq7QL8rHjhgF0BU08,32
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  SURE/perturb/perturb.py,sha256=CqO3xPfNA3cG175tadDidKvGsTu_yKfJRRLn_93awKM,3303
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  SURE/utils/__init__.py,sha256=Htqv4KqVKcRiaaTBsR-6yZ4LSlbhbzutjNKXGD9-uds,660
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- SURE/utils/custom_mlp.py,sha256=n0GJj8GKSAqvyokCL_6LugbeedzqLdfBijq24B_I9dA,7113
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+ SURE/utils/custom_mlp.py,sha256=IlW5L_YEhtn0guHlGyvGLRjJ5JOIWs4qB7BPi1Dmq9U,7116
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  SURE/utils/queue.py,sha256=E_5PA5EWcBoGAZj8BkKQnkCK0p4C-4-xcTPqdIXaPXU,1892
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  SURE/utils/utils.py,sha256=IUHjDDtYaAYllCWsZyIzqQwaLul6fJRvHRH4vIYcR-c,8462
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- sure_tools-2.1.19.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
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- sure_tools-2.1.19.dist-info/METADATA,sha256=HeSPFQiQYB3_WzX5MSw9Oe8ek1Foj407SwZNOTiw8vc,2651
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- sure_tools-2.1.19.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- sure_tools-2.1.19.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
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- sure_tools-2.1.19.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
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- sure_tools-2.1.19.dist-info/RECORD,,
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+ sure_tools-2.1.21.dist-info/licenses/LICENSE,sha256=TFHKwmrAViXQbSX5W-NDItkWFjm45HWOeUniDrqmnu0,1065
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+ sure_tools-2.1.21.dist-info/METADATA,sha256=5pPz0o1rpF7udNtmSfrCFE14qcuhl-86De2HkA_fUww,2651
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+ sure_tools-2.1.21.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ sure_tools-2.1.21.dist-info/entry_points.txt,sha256=-nJI8rVe_qqrR0HmfAODzj-JNfEqCcSsyVh6okSqyHk,83
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+ sure_tools-2.1.21.dist-info/top_level.txt,sha256=BtFTebdiJeqra4r6mm-uEtwVRFLZ_IjYsQ7OnalrOvY,5
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+ sure_tools-2.1.21.dist-info/RECORD,,