Rhapso 0.1.99__py3-none-any.whl → 0.1.991__py3-none-any.whl

{rhapso-0.1.99.dist-info → rhapso-0.1.991.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: Rhapso
-Version: 0.1.99
+Version: 0.1.991
 Summary: A python package for aligning and stitching light sheet fluorescence microscopy images
 Author: ND
 Author-email: sean.fite@alleninstitute.org
@@ -46,7 +46,7 @@ Dynamic: summary
 
 # Rhapso
 
-This is the code base for **Rhapso**, a modular Python toolkit for the alignment and stitching of large-scale microscopy datasets. 
+This is the official code base for **Rhapso**, a modular Python toolkit for the alignment and stitching of large-scale microscopy datasets. 
 
 [![License](https://img.shields.io/badge/license-MIT-brightgreen)](LICENSE)
 [![Python Version](https://img.shields.io/badge/python-3.10-blue.svg)](https://www.python.org/downloads/release/python-3100/)
@@ -64,6 +64,8 @@ This is the code base for **Rhapso**, a modular Python toolkit for the alignment
 - [Performance](#performance)
 - [Layout](#layout)
 - [Installation](#installation)
+- [How To Start](#how-to-start)
+- [Try Rhapso on Sample Data](#try-rhapso-on-sample-data)
 - [Ray](#ray)
 - [Run Locally w/ Ray](#run-locally-with-ray)
 - [Run on AWS Cluster w/ Ray](#run-on-aws-cluster-with-ray)
@@ -88,13 +90,7 @@ Rhapso is still loading... and while we wrap up development, a couple things to
 ## Summary
 Rhapso is a set of Python components used to register, align, and stitch large-scale, overlapping, tile-based, multiscale microscopy datasets. Its stateless components can run on a single machine or scale out across cloud-based clusters. 
 
-Rhapso is published on PyPI and can be installed with:
-
-```bash
-pip install Rhapso
-```
-
-<br>
+Rhapso is published on PyPI.
 
 Rhapso was developed by the Allen Institute for Neural Dynamics.
 
@@ -213,6 +209,24 @@ A good way to get started:
 
 <br>
 
+## Try Rhapso on Sample Data
+
+The quickest way to get familiar with Rhapso is to run it on a real dataset. We have a small (10GB) Z1 example hosted in a public S3 bucket, so you can access it without special permissions. It’s a good starting point to copy and adapt for your own alignment workflows.
+
+XML (input)
+- s3://aind-open-data/HCR_802704_2025-08-30_02-00-00_processed_2025-10-01_21-09-24/image_tile_alignment/single_channel_xmls/channel_488.xml
+
+Image prefix (referenced by the XML)
+- s3://aind-open-data/HCR_802704_2025-08-30_02-00-00_processed_2025-10-01_21-09-24/image_radial_correction/
+
+<br>
+
+**Note:** Occasionally we clean up our aind-open-data bucket. If you find this dataset does not exist, please create an issue and we will replace it.
+
+---
+
+<br>
+
 ## High Level Approach to Registration, Alignment, and Fusion
 
 This process has a lot of knobs and variations, and when used correctly, can work for a broad range of datasets.

{rhapso-0.1.99.dist-info → rhapso-0.1.991.dist-info}/RECORD

@@ -90,12 +90,12 @@ Rhapso/split_dataset/save_points.py,sha256=k-jH-slmxkbrxDl-uJvDkwOedi6cg7md3kg_a
 Rhapso/split_dataset/save_xml.py,sha256=Iq1UdFa8sdnWGygfIpDi4F5In-SCWggpl7lnuDTxkHE,14280
 Rhapso/split_dataset/split_images.py,sha256=2RzAi0btV1tmh4le9QotRif1IYUU6_4pLcGGpFBM9zk,22434
 Rhapso/split_dataset/xml_to_dataframe_split.py,sha256=ByaLzJ4sqT417UiCQU31_CS_V4Jms7pjMbBl0ZdSNNA,8570
-rhapso-0.1.99.dist-info/licenses/LICENSE,sha256=U0Y7B3gZJHXpjJVLgTQjM8e_c8w4JJpLgGhIdsoFR1Y,1092
+rhapso-0.1.991.dist-info/licenses/LICENSE,sha256=U0Y7B3gZJHXpjJVLgTQjM8e_c8w4JJpLgGhIdsoFR1Y,1092
 tests/__init__.py,sha256=LYf6ZGyYRcduFFSaOLmnw3rTyfS3XLib0dsTHDWH0jo,37
 tests/test_detection.py,sha256=NtFYR_du9cbKrclQcNiJYsKzyqly6ivF61pw6_NICcM,440
 tests/test_matching.py,sha256=QX0ekSdyIkPpAsXHfSMqJUUlNZg09caSlhhUM63MduM,697
 tests/test_solving.py,sha256=t8I9XPV_4ZFM-DJpgvdYXxkG2_4DQgqs-FFyE5w8Nfg,695
-rhapso-0.1.99.dist-info/METADATA,sha256=kqyfZB6PEVsMDtjj-8QH_P1VxJvAQxMG4wUdmvVXeYY,18488
-rhapso-0.1.99.dist-info/WHEEL,sha256=SmOxYU7pzNKBqASvQJ7DjX3XGUF92lrGhMb3R6_iiqI,91
-rhapso-0.1.99.dist-info/top_level.txt,sha256=NXvsrsTfdowWbM7MxEjkDZE2Jo74lmq7ruWkp70JjSw,13
-rhapso-0.1.99.dist-info/RECORD,,
+rhapso-0.1.991.dist-info/METADATA,sha256=QjjEf8EIF1t2I1mvBmN22MSawRvJNQLWV_pnh08YlZ0,19294
+rhapso-0.1.991.dist-info/WHEEL,sha256=SmOxYU7pzNKBqASvQJ7DjX3XGUF92lrGhMb3R6_iiqI,91
+rhapso-0.1.991.dist-info/top_level.txt,sha256=NXvsrsTfdowWbM7MxEjkDZE2Jo74lmq7ruWkp70JjSw,13
+rhapso-0.1.991.dist-info/RECORD,,