RNApolis 0.10.0__py3-none-any.whl → 0.10.1__py3-none-any.whl

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Files changed (7) hide show
  1. rnapolis/parser.py +3 -0
  2. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/METADATA +1 -1
  3. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/RECORD +7 -7
  4. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/WHEEL +0 -0
  5. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/entry_points.txt +0 -0
  6. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/licenses/LICENSE +0 -0
  7. {rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/top_level.txt +0 -0
rnapolis/parser.py CHANGED
@@ -18,6 +18,9 @@ def read_3d_structure(
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  atoms, modified, sequence_by_entity, is_nucleic_acid_by_entity = (
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  parse_cif(cif_or_pdb) if is_cif(cif_or_pdb) else parse_pdb(cif_or_pdb)
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  )
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+ if not atoms:
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+ logger.warning("No atoms parsed from file, returning empty Structure3D.")
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+ return Structure3D([])
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  available_models = {atom.model: None for atom in atoms}
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  atoms_by_model = {
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  model: list(filter(lambda atom: atom.model == model, atoms))
{rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: RNApolis
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- Version: 0.10.0
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+ Version: 0.10.1
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  Summary: A Python library containing RNA-related bioinformatics functions and classes
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  Home-page: https://github.com/tzok/rnapolis-py
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  Author: Tomasz Zok
{rnapolis-0.10.0.dist-info → rnapolis-0.10.1.dist-info}/RECORD RENAMED
@@ -12,7 +12,7 @@ rnapolis/metareader.py,sha256=I1-cXc2YNBPwa3zihAnMTjEsAo79tEKzSmWu5yvN1Pk,2071
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  rnapolis/mmcif_pdbx_v50.dic,sha256=5QFx1ssDaehR4_DQ-tS9VQux262SiLXaqcwmwwejF5c,5744659
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  rnapolis/molecule_filter.py,sha256=jgcpJxx_oXEBX0d30v4k_FdwRouRUPUsEtCYWgLGpD4,7310
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  rnapolis/motif_extractor.py,sha256=Lfn1iEkhkP9eZD3GPEWNAfy00QO7QPCc8wM_XS1ory8,1147
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- rnapolis/parser.py,sha256=k_OS-AsTkxJ8n-dfq0Qyjsvg4jQtEvvRrOCyaN5cRE0,16469
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+ rnapolis/parser.py,sha256=hdcBSyX-CJTVPeLy7h9aKlGLmVwLo73T-Tvi3ivqO-0,16600
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  rnapolis/parser_v2.py,sha256=qG6CO3or7zmuJu368g9Nzokiqdeip4yjD14F163uH6w,40618
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  rnapolis/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rnapolis/rfam_folder.py,sha256=SjiiyML_T1__saruFwSMJEoQ7Y55GIU8ktS8ZUn5-fw,11111
@@ -22,9 +22,9 @@ rnapolis/tertiary_v2.py,sha256=SgijTv0bPqMJwsMqyQk0O8QAnS2Ozk45vk8igxt9hRs,38001
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  rnapolis/transformer.py,sha256=aC0nBmHHJf5TyLvBIV57Jj3tlwpvHbPo347opfAOlQA,3844
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  rnapolis/unifier.py,sha256=2ge7IB9FdRgzSAiVD39U_ciwtdDJ2fGzf8mUIudbrqY,5820
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  rnapolis/util.py,sha256=IdquFO3PV1_KDqodjupzm0Rqvgy0CeSzxGHaGEHYXVU,543
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- rnapolis-0.10.0.dist-info/licenses/LICENSE,sha256=ZGRu12MzCgbYA-Lt8MyBlmjvPZh7xfiD5u5wBx0enq4,1066
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- rnapolis-0.10.0.dist-info/METADATA,sha256=jWmI7Vjo31d4SRc6F6kPhudPQGHhpufnzWpSY_9rrvk,54611
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- rnapolis-0.10.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- rnapolis-0.10.0.dist-info/entry_points.txt,sha256=MZMWnYBUYnis-zWDmFfuA5yXtU3W5YdQrm5HA5LrkeM,474
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- rnapolis-0.10.0.dist-info/top_level.txt,sha256=LcO18koxZcWoJ21KDRRRo_tyIbmXL5z61dPitZpy8yc,9
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- rnapolis-0.10.0.dist-info/RECORD,,
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+ rnapolis-0.10.1.dist-info/licenses/LICENSE,sha256=ZGRu12MzCgbYA-Lt8MyBlmjvPZh7xfiD5u5wBx0enq4,1066
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+ rnapolis-0.10.1.dist-info/METADATA,sha256=rjPTfIJ666l8ZmlocJWBO2_5OSem_9r-AyCe-zFR7as,54611
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+ rnapolis-0.10.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ rnapolis-0.10.1.dist-info/entry_points.txt,sha256=MZMWnYBUYnis-zWDmFfuA5yXtU3W5YdQrm5HA5LrkeM,474
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+ rnapolis-0.10.1.dist-info/top_level.txt,sha256=LcO18koxZcWoJ21KDRRRo_tyIbmXL5z61dPitZpy8yc,9
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+ rnapolis-0.10.1.dist-info/RECORD,,