PyPartMC 1.4.2__cp311-cp311-macosx_13_0_x86_64.whl → 2.0.0rc4__cp311-cp311-macosx_13_0_x86_64.whl

PyPartMC/__init__.py

@@ -1,13 +1,18 @@
 """
-.. include::../README.md
+.. include::../../README.md
 """
 
+#  pylint: disable=invalid-name
+import importlib.metadata
+
 # pylint: disable=invalid-name,wrong-import-position
 import os
 from collections import namedtuple
 from contextlib import contextmanager
 from pathlib import Path
 
+import nanobind
+
 
 # https://github.com/diegoferigo/cmake-build-extension/blob/master/src/cmake_build_extension/__init__.py
 @contextmanager
@@ -69,10 +74,13 @@ si = __generate_si()
     SI-prefix-aware unit multipliers, resulting in e.g.: `p = 1000 * si.hPa`
     notation. Note: no dimensional analysis is done! """
 
-with __build_extension_env():
-    import _PyPartMC
-    from _PyPartMC import *
-    from _PyPartMC import __all__ as _PyPartMC_all  # pylint: disable=no-name-in-module
-    from _PyPartMC import __version__, __versions_of_build_time_dependencies__
+from ._PyPartMC import *  # pylint: disable=import-error
+from ._PyPartMC import (  # pylint: disable=import-error
+    __versions_of_build_time_dependencies__,
+)
+
+__version__ = importlib.metadata.version(__package__)
 
-    __all__ = tuple([*_PyPartMC_all, "si"])
+# walkaround for MATLAB bindings
+# pylint: disable=undefined-variable
+setattr(nanobind, "nb_type_0", type(_PyPartMC.AeroData))

{PyPartMC-1.4.2.dist-info → pypartmc-2.0.0rc4.dist-info}/METADATA

@@ -1,23 +1,18 @@
-Metadata-Version: 2.2
+Metadata-Version: 2.4
 Name: PyPartMC
-Version: 1.4.2
+Version: 2.0.0rc4
 Summary: Python interface to PartMC
-Author: PyPartMC team (see https://github.com/open-atmos/PyPartMC/graphs/contributors)
-Author-email: nriemer@illinois.edu
-License: GPL-3.0
-Project-URL: Tracker, https://github.com/open-atmos/PyPartMC/issues
+Author-Email: "https://github.com/open-atmos/PyPartMC/graphs/contributors" <nriemer@illinois.edu>
+License-Expression: GPL-3.0
 Project-URL: Documentation, https://open-atmos.github.io/PyPartMC
 Project-URL: Source, https://github.com/open-atmos/PyPartMC/
-Requires-Python: >=3.7
-Description-Content-Type: text/markdown
-License-File: LICENSE
+Project-URL: Tracker, https://github.com/open-atmos/PyPartMC/issues
+Requires-Python: >=3.8
 Requires-Dist: numpy
+Requires-Dist: nanobind
 Provides-Extra: tests
 Requires-Dist: pytest; extra == "tests"
 Requires-Dist: pytest-order; extra == "tests"
-Requires-Dist: fastcore!=1.5.8; extra == "tests"
-Requires-Dist: ghapi; extra == "tests"
-Requires-Dist: scipy; extra == "tests"
 Provides-Extra: examples
 Requires-Dist: matplotlib!=3.10.0; extra == "examples"
 Requires-Dist: ipywidgets; extra == "examples"
@@ -26,16 +21,8 @@ Requires-Dist: open-atmos-jupyter-utils; extra == "examples"
 Requires-Dist: PySDM; extra == "examples"
 Requires-Dist: PyMieScatt; extra == "examples"
 Requires-Dist: SciPy; extra == "examples"
-Dynamic: author
-Dynamic: author-email
-Dynamic: description
-Dynamic: description-content-type
-Dynamic: license
-Dynamic: project-url
-Dynamic: provides-extra
-Dynamic: requires-dist
-Dynamic: requires-python
-Dynamic: summary
+Requires-Dist: dustpy; platform_system != "Windows" and extra == "examples"
+Description-Content-Type: text/markdown
 
 ![logo](https://raw.githubusercontent.com/wiki/open-atmos/PyPartMC/logo.svg)
 
@@ -62,12 +49,13 @@ If interested in contributing to PyPartMC, please have a look a the [notes for d
    
 [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.html)
 [![Copyright](https://img.shields.io/static/v1?label=Copyright&color=249fe2&message=UIUC&)](https://atmos.illinois.edu/)
-[![tests+pypi](https://github.com/open-atmos/PyPartMC/actions/workflows/tests+pypi.yml/badge.svg)](https://github.com/open-atmos/PyPartMC/actions/workflows/tests+pypi.yml)
+[![tests+pypi](https://github.com/open-atmos/PyPartMC/actions/workflows/buildwheels.yml/badge.svg)](https://github.com/open-atmos/PyPartMC/actions/workflows/buildwheels.yml)
 [![API docs](https://shields.mitmproxy.org/badge/docs-pdoc.dev-brightgreen.svg)](https://open-atmos.github.io/PyPartMC/)
 [![codecov](https://codecov.io/gh/open-atmos/PyPartMC/graph/badge.svg?token=27IK9ZIQXE)](https://codecov.io/gh/open-atmos/PyPartMC)
 [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.7662635.svg)](https://doi.org/10.5281/zenodo.7662635)
 [![PyPI version](https://badge.fury.io/py/PyPartMC.svg)](https://pypi.org/p/PyPartMC)
 [![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
+[![pyOpenSci Peer-Reviewed](https://pyopensci.org/badges/peer-reviewed.svg)](https://github.com/pyOpenSci/software-review/issues/179)
 
 [![Python 3](https://img.shields.io/static/v1?label=Python&logo=Python&color=3776AB&message=3)](https://www.python.org/)
 [![Linux OK](https://img.shields.io/static/v1?label=Linux&logo=Linux&color=yellow&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Linux)
@@ -129,15 +117,20 @@ pip install PyPartMC[examples]
 [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/cloud_parcel.ipynb)
 [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/cloud_parcel.ipynb)
 [![ARM JupyterHub](https://img.shields.io/static/v1?label=launch%20in&logo=jupyter&color=lightblue&message=ARM+JupyterHub)](https://jupyterhub.arm.gov/hub/user-redirect/git-pull?repo=https%3A//github.com/open-atmos/PyPartMC&branch=main&urlPath=)
-- Coagulation Model Intercomparison with PySDM, Droplets.jl:    
-[![View notebook](https://img.shields.io/static/v1?label=render%20on&logo=github&color=87ce3e&message=GitHub)](https://github.com/open-atmos//PyPartMC/blob/main/examples/additive_coag_comparison.ipynb) 
+- Coagulation model intercomparison for additive (Golovin) kernel with: PyPartMC, [PySDM](https://open-atmos.github.io/PySDM), [Droplets.jl](https://github.com/emmacware/droplets.jl) and [dustpy](https://stammler.github.io/dustpy/):    
+[![View notebook](https://img.shields.io/static/v1?label=render%20on&logo=github&color=87ce3e&message=GitHub)](https://github.com/open-atmos/PyPartMC/blob/main/examples/additive_coag_comparison.ipynb) 
 [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/additive_coag_comparison.ipynb) 
 [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/additive_coag_comparison.ipynb)
 [![ARM JupyterHub](https://img.shields.io/static/v1?label=launch%20in&logo=jupyter&color=lightblue&message=ARM+JupyterHub)](https://jupyterhub.arm.gov/hub/user-redirect/git-pull?repo=https%3A//github.com/open-atmos/PyPartMC&branch=main&urlPath=)   
+- Particle simulation with multiphase chemistry handled using [CAMP](https://doi.org/10.5194/gmd-15-3663-2022) (without coagulation):   
+[![View notebook](https://img.shields.io/static/v1?label=render%20on&logo=github&color=87ce3e&message=GitHub)](https://github.com/open-atmos/PyPartMC/blob/main/examples/particle_simulation_with_camp.ipynb.ipynb) 
+[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/particle_simulation_with_camp.ipynb) 
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/particle_simulation_with_camp.ipynb)
+[![ARM JupyterHub](https://img.shields.io/static/v1?label=launch%20in&logo=jupyter&color=lightblue&message=ARM+JupyterHub)](https://jupyterhub.arm.gov/hub/user-redirect/git-pull?repo=https%3A//github.com/open-atmos/PyPartMC&branch=main&urlPath=)   
 
 ## Features
 
-- works on Linux, macOS and Windows (compatibility assured with [CI builds](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/tests.yml))
+- works on Linux, macOS and Windows (compatibility assured with [CI builds](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/buildwheels.yml))
 - hassle-free installation using `pip` (prior PartMC installation **not needed**)
 - works out of the box on [mybinder.org](https://mybinder.org/), [Google Colab](colab.research.google.com/) and alike
 - ships with [a set of examples](https://github.com/open-atmos/PyPartMC/tree/main/examples) maintained in a form of Jupyter notebooks
@@ -181,9 +174,7 @@ aero_dist = ppmc.AeroDist(
             "num_conc": 3200 / si.cm**3,
             "geom_mean_diam": 8.64 * si.nm,
             "log10_geom_std_dev": 0.28,
-        }
-    },
-    {
+        },
         "diesel": {
             "mass_frac": [{"OC": [0.3]}, {"BC": [0.7]}],
             "diam_type": "geometric",
@@ -225,9 +216,7 @@ aero_dist = ppmc.AeroDist(aero_data, (
       "num_conc" => 3200 / si.cm^3,
       "geom_mean_diam" => 8.64 * si.nm,
       "log10_geom_std_dev" => .28,
-    )
-  ),
-  Dict( 
+    ),
     "diesel" => Dict(
       "mass_frac" => (Dict("OC" => (.3,)), Dict("BC" => (.7,))),
       "diam_type" => "geometric",
@@ -236,7 +225,7 @@ aero_dist = ppmc.AeroDist(aero_data, (
       "geom_mean_diam" => 50 * si.nm,
       "log10_geom_std_dev" => .24,
     )
-  )
+  ),
 ))
 
 n_part = 100
@@ -250,7 +239,6 @@ print(aero_state.masses()'aero_state.num_concs, "# kg/m3")
 notes (see the [PyPartMC Matlab CI workflow](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/readme_listings.yml) for an example on how to achieve it on Ubuntu 20):
 - Matlab ships with convenience copies of C, C++ and Fortran runtime libraries which are `dlopened()` by default; one way to make PyPartMC OK with it is to [pip-]install by compiling from source using the very same version of GCC that Matlab borrowed these libraries from (e.g., [GCC 9 for Matlab R2022a, etc](https://www.mathworks.com/support/requirements/supported-compilers-linux.html));
 - Matlab needs to [use the same Python interpretter/venv](https://www.mathworks.com/support/requirements/python-compatibility.html) as the pip invocation used to install PyPartMC;
-- a single-line `pybind11_builtins.py` file with just `pybind11_type=type` inside needs to be placed within Matlab's `PYTHONPATH` to sort out a [Matlab-pybind11 incompatibility](https://github.com/pybind/pybind11/issues/3945). 
 
 ````Matlab
 ppmc = py.importlib.import_module('PyPartMC');
@@ -270,9 +258,7 @@ aero_dist = ppmc.AeroDist(aero_data, py.tuple({ ...
       "num_conc", 3200 / si.cm^3, ...
       "geom_mean_diam", 8.64 * si.nm, ...
       "log10_geom_std_dev", .28 ...
-    )) ...
-  )), ...
-  py.dict(pyargs( ... 
+    )), ...
     "diesel", py.dict(pyargs( ...
       "mass_frac", py.tuple({ ...
         py.dict(pyargs("OC", py.tuple({.3}))), ...

pypartmc-2.0.0rc4.dist-info/RECORD

@@ -0,0 +1,9 @@
+pypartmc-2.0.0rc4.dist-info/RECORD,,
+pypartmc-2.0.0rc4.dist-info/WHEEL,sha256=-kpY2NkqiMsFcfXtLL-HesLA6_QDkEt6jf2f9U_iaP8,142
+pypartmc-2.0.0rc4.dist-info/METADATA,sha256=lBLrEuhekaomGGZnNoffaa6Fpxzyxes9GGcFxPyTB20,27597
+pypartmc-2.0.0rc4.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
+PyPartMC/__init__.py,sha256=e1ngb8Sodfqneb__Vmf_K5eIOoOY11gvrSHmlIZbruM,2349
+PyPartMC/_PyPartMC.cpython-311-darwin.so,sha256=rkkd1wYKdfstSOqMmHelwTXXlK-umhSdKoIk8P25D98,8485472
+PyPartMC/.dylibs/libgfortran.5.dylib,sha256=uZj18mk7PGjzH0FQclHZLMRAcsG4TETIRZt_8CGlEpg,3988672
+PyPartMC/.dylibs/libquadmath.0.dylib,sha256=19PcPx5n69p9h9xP2dOhLmhRI2hzljSQcJBXLyFC2go,379200
+PyPartMC/.dylibs/libgcc_s.1.1.dylib,sha256=mW61tfzTB6d8xKZxf5SR2V03z7kbDW950dagh_mLK_U,266112

pypartmc-2.0.0rc4.dist-info/WHEEL

@@ -0,0 +1,6 @@
+Wheel-Version: 1.0
+Generator: scikit-build-core 0.11.6
+Root-Is-Purelib: false
+Tag: cp311-cp311-macosx_13_0_x86_64
+Generator: delocate 0.13.0
+

PyPartMC-1.4.2.dist-info/RECORD

@@ -1,7 +0,0 @@
-_PyPartMC.cpython-311-darwin.so,sha256=FaRwDyNJ35dHoJ1mHnyOyw-gmTTCLGxPbJVho4ETcZ0,8563200
-PyPartMC/__init__.py,sha256=VAqwePpJZEFJ7YieM1GbUvfluRhUyWXciP89pY9xIH4,2217
-PyPartMC-1.4.2.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
-PyPartMC-1.4.2.dist-info/METADATA,sha256=13FCHfmpa1L9yZ56niRxU1JdUvig_QFHUfpodvQzAMI,26885
-PyPartMC-1.4.2.dist-info/WHEEL,sha256=eyLsquYthM-ObRdFkuJzc-uB_vjjWjSA-y9i_w5yfWM,114
-PyPartMC-1.4.2.dist-info/top_level.txt,sha256=PJxy22pTnxcBhqrb6r4AIL32rkxA61gzw7ohlzybgSM,19
-PyPartMC-1.4.2.dist-info/RECORD,,

PyPartMC-1.4.2.dist-info/WHEEL

@@ -1,5 +0,0 @@
-Wheel-Version: 1.0
-Generator: setuptools (75.8.0)
-Root-Is-Purelib: false
-Tag: cp311-cp311-macosx_13_0_universal2
-

PyPartMC-1.4.2.dist-info/top_level.txt

@@ -1,2 +0,0 @@
-PyPartMC
-_PyPartMC