ONE-api 3.4.0__py3-none-any.whl → 3.4.2__py3-none-any.whl

one/__init__.py

@@ -1,2 +1,2 @@
 """The Open Neurophysiology Environment (ONE) API."""
-__version__ = '3.4.0'
+__version__ = '3.4.2'

one/alf/cache.py

@@ -538,13 +538,18 @@ def merge_tables(cache, strict=False, origin=None, **kwargs):
         cache[table] = pd.concat(frames).sort_index()
         updated = datetime.datetime.now()
         # Update the table metadata with the origin
+        table_meta = cache['_meta']['raw'].get(table, {})
         if origin is not None:
-            table_meta = cache['_meta']['raw'].get(table, {})
             if 'origin' not in table_meta:
-                table_meta['origin'] = set(origin)
+                table_meta['origin'] = set(ensure_list(origin))
             else:
                 table_meta['origin'].add(origin)
             cache['_meta']['raw'][table] = table_meta
+        # Makes sure that the `date_created` field exists for a new table
+        if 'date_created' not in table_meta.keys():
+            table_meta['date_created'] = datetime.datetime.now().isoformat(
+                sep=' ', timespec='minutes')
+            cache['_meta']['raw'][table] = table_meta
     cache['_meta']['modified_time'] = updated
     return updated
 

one/webclient.py

@@ -134,12 +134,16 @@ def _cache_response(method):
         # Reversible but length may exceed 255 chars
         # name = base64.urlsafe_b64encode(args[2].encode('UTF-8')).decode('UTF-8')
         files = list(rest_cache.glob(name))
-        cached = None
+        cached, when = None, None
         if len(files) == 1 and not clobber:
             _logger.debug('loading REST response from cache')
-            with open(files[0], 'r') as f:
-                cached, when = json.load(f)
-            if datetime.fromisoformat(when) > datetime.now():
+            try:
+                with open(files[0], 'r') as f:
+                    cached, when = json.load(f)
+            except json.JSONDecodeError as e:
+                _logger.debug(f'corrupted cache file {name}: {e}')
+                files[0].unlink()  # delete corrupted cache file
+            if cached and datetime.fromisoformat(when) > datetime.now():
                 return cached
         try:
             response = method(alyx_client, *args, **kwargs)
@@ -409,7 +413,7 @@ def http_download_file(full_link_to_file, chunks=None, *, clobber=False, silent=
         Directory in which files are downloaded; defaults to user's Download directory
     return_md5 : bool
         If True an MD5 hash of the file is additionally returned
-    headers : list of dicts
+    headers : dict
         Additional headers to add to the request (auth tokens etc.)
 
     Returns
@@ -1502,7 +1506,9 @@ class AlyxClient:
                 if len(set(kwargs.keys()) - set(self.rest_schemes.field_names(endpoint, action))):
                     missing = set(kwargs.keys()) - set(
                         self.rest_schemes.field_names(endpoint, action))
-                    raise ValueError(f"Error: Unsupported fields '{missing}' in query parameters.")
+                    warnings.warn(
+                        f"Error: Unsupported fields '{missing}' in query parameters"
+                        f" for endpoint {endpoint}.")
                 query_params = {k: ','.join(map(str, ensure_list(v))) for k, v in kwargs.items()}
                 url = update_url_params(url, query_params)
             return self.get('/' + url, **cache_args)

{one_api-3.4.0.dist-info → one_api-3.4.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ONE-api
-Version: 3.4.0
+Version: 3.4.2
 Summary: Open Neurophysiology Environment
 Author: IBL Staff
 License: MIT
@@ -13,8 +13,8 @@ Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE
 Requires-Dist: ruff
-Requires-Dist: numpy>=1.18
-Requires-Dist: pandas>=1.5.0
+Requires-Dist: numpy<2.4,>=1.18
+Requires-Dist: pandas<3.0.0,>=1.5.0
 Requires-Dist: tqdm>=4.32.1
 Requires-Dist: requests>=2.22.0
 Requires-Dist: iblutil>=1.14.0
@@ -46,7 +46,7 @@ pip install ONE-api
 For using ONE with a local cache directory:
 ```python
 from one.api import One
-one = One(cache_dir='/home/user/downlaods/ONE/behavior_paper')
+one = One(cache_dir='/home/user/downloads/ONE/behavior_paper')
 ```
 
 To use the default setup settings that connect you to the [IBL public database](https://openalyx.internationalbrainlab.org):

{one_api-3.4.0.dist-info → one_api-3.4.2.dist-info}/RECORD

@@ -1,12 +1,12 @@
-one/__init__.py,sha256=ES5qgmOu3N9DIY6pYRktkekc3QjPDC9EzggVOEBhEes,76
+one/__init__.py,sha256=f5lexfu1SjyD_0KnM8kbdiDOU6tIW5X-gV18sSAlKSs,76
 one/api.py,sha256=iPt_fwXqtSRCzmTdaG7NQwkhheETMRn9USrJYSzZX-s,137364
 one/converters.py,sha256=icKlwPyxf3tJtyOFBj_SG06QDLIZLdTGalCSk1-cAvk,30733
 one/params.py,sha256=zwR0Yq09ztROfH3fJsCUc-IDs_PBixT3WU3dm1vX728,15050
 one/registration.py,sha256=cWvQFAzCF04wMZJjdOzBPJkYOJ3BO2KEgqtVG7qOlmA,36177
 one/util.py,sha256=knjwgpSK427mTovHN1UJgzCmQDrsOoU9_prDVlFPDRk,20558
-one/webclient.py,sha256=a48Iewrac3CKGrHDcG9jm8p3vcUYTOhnEJpYzsvYDL8,61456
+one/webclient.py,sha256=msKVP8uVFk5Mgy45nb35bMP1-AuY1JL2YyJQ6dZRMVo,61747
 one/alf/__init__.py,sha256=DaFIi7PKlurp5HnyNOpJuIlY3pyhiottFpJfxR59VsY,70
-one/alf/cache.py,sha256=09NDLGIUA6GcCJgzbDxSFpgq9sU6gyCuHIF8c7zHAMM,24814
+one/alf/cache.py,sha256=w2Egr9xDXQetS6m9_bNmPAcENC3e9QaTouXGFWE21QI,25124
 one/alf/exceptions.py,sha256=6Gw8_ZObLnuYUpY4i0UyU4IA0kBZMBnJBGQyzIcDlUM,3427
 one/alf/io.py,sha256=7mmd1wJwh7qok0WKkpGzkLxEuw4WSnaQ6EkGVvaODLI,30798
 one/alf/path.py,sha256=ylOUQK0TmBBHC_lJbgc0b_u8DTY8yP2hpouT0sIklvs,54065
@@ -32,8 +32,8 @@ one/tests/fixtures/rest_responses/db1731fb8df0208944ae85f76718430813a8bf50,sha25
 one/tests/fixtures/rest_responses/dcce48259bb929661f60a02a48563f70aa6185b3,sha256=skaKl6sPgTyrufCIGNVNJfccXM-jSjYvAdyqNS3HXuA,416
 one/tests/fixtures/rest_responses/f530d6022f61cdc9e38cc66beb3cb71f3003c9a1,sha256=6TgUqgqa7OgSyW3apDAnzjAOjMyHi_xV2M8uwOvvYoY,22575
 one/tests/fixtures/rest_responses/openapiv3.json,sha256=wsmvJbNXy3t-9oGQyKJZjeCGXFpzxdJCjYsaJfv3s6g,317831
-one_api-3.4.0.dist-info/licenses/LICENSE,sha256=W6iRQJcr-tslNfY4gL98IWvPtpe0E3tcWCFOD3IFUqg,1087
-one_api-3.4.0.dist-info/METADATA,sha256=JvqFPWDFCl3b0qRAtTaHnusDj57Bf2RMC_DqZyzPye8,4170
-one_api-3.4.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-one_api-3.4.0.dist-info/top_level.txt,sha256=LIsI2lzmA5jh8Zrw5dzMdE3ydLgmq-WF6rpoxSVDSAY,4
-one_api-3.4.0.dist-info/RECORD,,
+one_api-3.4.2.dist-info/licenses/LICENSE,sha256=W6iRQJcr-tslNfY4gL98IWvPtpe0E3tcWCFOD3IFUqg,1087
+one_api-3.4.2.dist-info/METADATA,sha256=lk6Bsxsy4FqPM4hn6hLCPm6Omd3agVeFK6IW3xsJDOc,4182
+one_api-3.4.2.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+one_api-3.4.2.dist-info/top_level.txt,sha256=LIsI2lzmA5jh8Zrw5dzMdE3ydLgmq-WF6rpoxSVDSAY,4
+one_api-3.4.2.dist-info/RECORD,,

{one_api-3.4.0.dist-info → one_api-3.4.2.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.9.0)
+Generator: setuptools (80.10.2)
 Root-Is-Purelib: true
 Tag: py3-none-any