MoleditPy 2.4.0__py3-none-any.whl → 2.4.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -16,7 +16,7 @@ from PyQt6.QtGui import QFont, QColor
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  from rdkit import Chem
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  #Version
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- VERSION = '2.4.0'
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+ VERSION = '2.4.1'
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  ATOM_RADIUS = 18
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  BOND_OFFSET = 3.5
@@ -500,6 +500,10 @@ class MainWindow(QMainWindow):
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  # --- MOVED TO main_window_export.py ---
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  return self.main_window_export.export_2d_png()
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+ def export_2d_svg(self):
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+ # --- MOVED TO main_window_export.py ---
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+ return self.main_window_export.export_2d_svg()
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+
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  def export_3d_png(self):
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  # --- MOVED TO main_window_export.py ---
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  return self.main_window_export.export_3d_png()
@@ -37,9 +37,11 @@ from PyQt6.QtGui import (
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  QBrush, QColor, QPainter, QImage
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  )
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+ from PyQt6.QtSvg import QSvgGenerator
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+
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  from PyQt6.QtCore import (
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- Qt, QRectF
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+ Qt, QRectF, QSize
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  )
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  import pyvista as pv
@@ -753,6 +755,118 @@ class MainWindowExport(object):
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+ def export_2d_svg(self):
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+ """2D drawingをSVGとしてエクスポート"""
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+ if not self.data.atoms:
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+ self.statusBar().showMessage("Nothing to export.")
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+ return
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+
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+ # default filename
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+ default_name = "untitled-2d"
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+ try:
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+ if self.current_file_path:
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+ base = os.path.basename(self.current_file_path)
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+ name = os.path.splitext(base)[0]
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+ default_name = f"{name}-2d"
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+ except Exception:
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+ default_name = "untitled-2d"
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+
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+ # prefer same directory
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+ default_path = default_name
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+ try:
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+ if self.current_file_path:
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+ default_path = os.path.join(os.path.dirname(self.current_file_path), default_name)
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+ except Exception:
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+ default_path = default_name
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+
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+ filePath, _ = QFileDialog.getSaveFileName(self, "Export 2D as SVG", default_path, "SVG Files (*.svg)")
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+ if not filePath:
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+ return
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+
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+ if not (filePath.lower().endswith(".svg")):
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+ filePath += ".svg"
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+
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+ # Ask about transparency
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+ reply = QMessageBox.question(self, 'Choose Background',
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+ 'Do you want a transparent background?\n(Choose "No" to use the current background color)',
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+ QMessageBox.StandardButton.Yes | QMessageBox.StandardButton.No | QMessageBox.StandardButton.Cancel,
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+ QMessageBox.StandardButton.Yes)
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+
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+ if reply == QMessageBox.StandardButton.Cancel:
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+ self.statusBar().showMessage("Export cancelled.", 2000)
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+ return
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+
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+ is_transparent = (reply == QMessageBox.StandardButton.Yes)
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+
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+ try:
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+ # 1. Hide non-molecular items if needed (optional, keeping consistent with PNG export)
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+ items_to_restore = {}
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+ original_background = self.scene.backgroundBrush()
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+
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+ all_items = list(self.scene.items())
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+ for item in all_items:
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+ is_mol_part = isinstance(item, (AtomItem, BondItem))
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+ if not (is_mol_part and item.isVisible()):
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+ # Keep measurement items visible if they are part of the scene?
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+ # For now, let's stick to hiding everything that isn't atom/bond,
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+ # similar to png export logic, or we can decide to export everything visible.
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+ # The PNG export hides non-atom/bond items. Let's follow that for consistency.
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+ items_to_restore[item] = item.isVisible()
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+ item.hide()
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+
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+ # 2. Calculate bounds
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+ molecule_bounds = QRectF()
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+ for item in self.scene.items():
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+ if isinstance(item, (AtomItem, BondItem)) and item.isVisible():
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+ molecule_bounds = molecule_bounds.united(item.sceneBoundingRect())
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+
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+ if molecule_bounds.isEmpty() or not molecule_bounds.isValid():
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+ self.statusBar().showMessage("Error: Could not determine molecule bounds for export.")
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+ # Restore
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+ for item, was_visible in items_to_restore.items():
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+ item.setVisible(was_visible)
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+ return
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+
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+ if is_transparent:
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+ self.scene.setBackgroundBrush(QBrush(Qt.BrushStyle.NoBrush))
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+
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+ # Margin
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+ rect_to_render = molecule_bounds.adjusted(-20, -20, 20, 20)
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+
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+ width = int(rect_to_render.width())
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+ height = int(rect_to_render.height())
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+
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+ # 3. Setup QSvgGenerator
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+ generator = QSvgGenerator()
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+ generator.setFileName(filePath)
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+ generator.setSize(QSize(width, height))
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+ generator.setViewBox(rect_to_render)
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+ generator.setTitle("MoleditPy Molecule")
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+
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+ # 4. Render
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+ painter = QPainter()
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+ painter.begin(generator)
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+ try:
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+ self.scene.render(painter, rect_to_render, rect_to_render)
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+ finally:
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+ painter.end()
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+
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+ self.statusBar().showMessage(f"2D view exported to {filePath}")
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+
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+ except Exception as e:
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+ self.statusBar().showMessage(f"An unexpected error occurred during SVG export: {e}")
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+
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+ finally:
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+ # Restore
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+ for item, was_visible in items_to_restore.items():
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+ item.setVisible(was_visible)
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+ if 'original_background' in locals():
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+ self.scene.setBackgroundBrush(original_background)
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+ if self.view_2d:
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+ self.view_2d.viewport().update()
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+
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+
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+
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  def export_3d_png(self):
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  if not self.current_mol:
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  self.statusBar().showMessage("No 3D molecule to export.", 2000)
@@ -920,6 +920,10 @@ class MainWindowMainInit(object):
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  export_2d_png_action = QAction("PNG Image...", self)
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  export_2d_png_action.triggered.connect(self.export_2d_png)
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  export_2d_menu.addAction(export_2d_png_action)
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+
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+ export_2d_svg_action = QAction("SVG Image...", self)
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+ export_2d_svg_action.triggered.connect(self.export_2d_svg)
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+ export_2d_menu.addAction(export_2d_svg_action)
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  # 3D エクスポート
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  export_3d_menu = export_menu.addMenu("3D Formats")
@@ -1597,6 +1601,15 @@ class MainWindowMainInit(object):
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  except Exception:
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  pass
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  # Update 2D scene styling to reflect default CPK colors
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+ try:
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+ # Reset 2D background specifically
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+ if hasattr(self, 'scene') and self.scene:
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+ bg_c = self.settings.get('background_color_2d', '#FFFFFF')
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+ self.scene.setBackgroundBrush(QBrush(QColor(bg_c)))
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+
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+ self.update_cpk_colors_from_settings()
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+ except Exception:
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+ pass
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  try:
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  if hasattr(self, 'scene') and self.scene:
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  for it in list(self.scene.items()):
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: MoleditPy
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- Version: 2.4.0
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+ Version: 2.4.1
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  Summary: A cross-platform, simple, and intuitive molecular structure editor built in Python. It allows 2D molecular drawing and 3D structure visualization. It supports exporting structure files for input to DFT calculation software.
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  Author-email: HiroYokoyama <titech.yoko.hiro@gmail.com>
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  License: GNU GENERAL PUBLIC LICENSE
@@ -12,20 +12,20 @@ moleditpy/modules/bond_item.py,sha256=hOwga7DcxZf8zxwZr8F7viTNgEi_9wftKFgSpROUJs
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  moleditpy/modules/bond_length_dialog.py,sha256=6bFPGssnqlgINuqpxLv-OhjMH3_hspnaH8QtorAyu2M,14782
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  moleditpy/modules/calculation_worker.py,sha256=KiGQY7i-QCQofEoE0r65KoQgpEGFcbhmxWv6egfkUdc,42324
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  moleditpy/modules/color_settings_dialog.py,sha256=Ow44BhCOLo0AFb6klO001k6B4drOgKX9DeNBQhZLp5o,15474
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- moleditpy/modules/constants.py,sha256=hrpODQcypcLqXV8--0NiGgWRyWgEKcS6ju3Q-2RBY1w,4702
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+ moleditpy/modules/constants.py,sha256=_KThEyBuzjfnKMFRCmrcHetn0kEWmXmVyiLT2bFsrQ0,4702
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  moleditpy/modules/constrained_optimization_dialog.py,sha256=REsk4ePsqNmAGPMTS_jckeM7jexrU3krwun8sKqKUCs,30062
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  moleditpy/modules/custom_interactor_style.py,sha256=LDNODMJoNHGe1AUSrvqv6PdeJm-hpPmSpWINppnJLt0,38942
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  moleditpy/modules/custom_qt_interactor.py,sha256=vCZsDfRO-FtphD5cTP7Ps-5rpHZMIGloaoe6EaKzrsw,4139
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  moleditpy/modules/dialog3_d_picking_mixin.py,sha256=z4udbkiX9PYmIGazPXsbftkk_oRRwZhcvlCqbyJzr24,6493
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  moleditpy/modules/dihedral_dialog.py,sha256=bOTDO6-b74vEDn_z6OyuBr5cRz3RnRj83PiaEBUyWJA,18002
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- moleditpy/modules/main_window.py,sha256=s5O-9B2MDrRg1OrXtq7rVtnqaQ9arWItGZ4Wgbn87SQ,36504
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+ moleditpy/modules/main_window.py,sha256=bYioEvqRVZVfLSJeV_Sw0TyA0rVWR4unQ0C5OgaDN2s,36642
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  moleditpy/modules/main_window_app_state.py,sha256=8YDcGNCSpLTO1NGL9tEvNkXpUcS7JW-uK7TdUGvEqnk,35189
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  moleditpy/modules/main_window_compute.py,sha256=ipIkhH_DONXDnPzh7xeym9X-Yfx8EhsvXYOdyxsAj4c,53347
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  moleditpy/modules/main_window_dialog_manager.py,sha256=QR96LqHAPSOShXbc9cK-Ffq8a16JrXAoMKB0pHjESrQ,20072
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  moleditpy/modules/main_window_edit_3d.py,sha256=CUArB5wcsgq1C7LygAEC6URlbnn4RhRYDa5n-Y-etWI,19731
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  moleditpy/modules/main_window_edit_actions.py,sha256=jjMBwCzwflEHHvf_zh_RBcup9ceR_H4dDEvdRrb6wno,69009
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- moleditpy/modules/main_window_export.py,sha256=YVrcFaY9xffFJ6eEH6Omh8Zif8KIs6_VDW_EAzN97AA,38218
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- moleditpy/modules/main_window_main_init.py,sha256=Qkpb2AvMADmQmdZ1190ufQ3OWwvcQTwu440riyBn9vg,94148
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+ moleditpy/modules/main_window_export.py,sha256=_Vd7MeP_xaLWDYDm3-ZIZiPuAXhP-AvrQbi7Yx3Jy3c,43020
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+ moleditpy/modules/main_window_main_init.py,sha256=t-um1lHvXo_tPXSkjx5Y0mjZlrKUhZbmb529e-7ffNU,94781
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  moleditpy/modules/main_window_molecular_parsers.py,sha256=KR6vzuqc3nutOcorpYr0QOyX3MFBcxTwDhZX96VgJ9Q,48291
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  moleditpy/modules/main_window_project_io.py,sha256=TWwtuKDuvgcvPZ9IGmW8r1EJJOrgxrIJRnxe_f4C1oM,17149
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  moleditpy/modules/main_window_string_importers.py,sha256=v47wOd4RtjKYcF-aLP-mogGGdYTpTEo3dDyAu79_5MM,10782
@@ -51,9 +51,9 @@ moleditpy/modules/assets/file_icon.ico,sha256=yyVj084A7HuMNbV073cE_Ag3Ne405qgOP3
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  moleditpy/modules/assets/icon.icns,sha256=wD5R6-Vw7K662tVKhu2E1ImN0oUuyAP4youesEQsn9c,139863
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  moleditpy/modules/assets/icon.ico,sha256=RfgFcx7-dHY_2STdsOQCQziY5SNhDr3gPnjO6jzEDPI,147975
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  moleditpy/modules/assets/icon.png,sha256=kCFN1WacYIdy0GN6SFEbNA00ef39pCczBnFdkkBI8Bs,147110
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- moleditpy-2.4.0.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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- moleditpy-2.4.0.dist-info/METADATA,sha256=yzgQyEPi642KrEMUGtKGerD1OOw-BLlLVe044KCz5l0,60629
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- moleditpy-2.4.0.dist-info/WHEEL,sha256=qELbo2s1Yzl39ZmrAibXA2jjPLUYfnVhUNTlyF1rq0Y,92
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- moleditpy-2.4.0.dist-info/entry_points.txt,sha256=yH1h9JjALhok1foXT3-hYrC4ufoZt8b7oiBcsdnGNNM,54
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- moleditpy-2.4.0.dist-info/top_level.txt,sha256=ARICrS4ihlPXqywlKl6o-oJa3Qz3gZRWu_VZsQ3_c44,10
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- moleditpy-2.4.0.dist-info/RECORD,,
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+ moleditpy-2.4.1.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
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+ moleditpy-2.4.1.dist-info/METADATA,sha256=Au-0u49T92vgtUFeMp_45D-KulYajiHuKYL0K0LsScw,60629
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+ moleditpy-2.4.1.dist-info/WHEEL,sha256=qELbo2s1Yzl39ZmrAibXA2jjPLUYfnVhUNTlyF1rq0Y,92
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+ moleditpy-2.4.1.dist-info/entry_points.txt,sha256=yH1h9JjALhok1foXT3-hYrC4ufoZt8b7oiBcsdnGNNM,54
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+ moleditpy-2.4.1.dist-info/top_level.txt,sha256=ARICrS4ihlPXqywlKl6o-oJa3Qz3gZRWu_VZsQ3_c44,10
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+ moleditpy-2.4.1.dist-info/RECORD,,