Mesa 2.2.3__py3-none-any.whl → 2.3.0__py3-none-any.whl

mesa/space.py

@@ -71,6 +71,21 @@ def is_integer(x: Real) -> bool:
     return isinstance(x, _types_integer)
 
 
+def warn_if_agent_has_position_already(placement_func):
+    def wrapper(self, agent, *args, **kwargs):
+        if agent.pos is not None:
+            warnings.warn(
+                f"""Agent {agent.unique_id} is being placed with
+place_agent() despite already having the position {agent.pos}. In most
+cases, you'd want to clear the current position with remove_agent()
+before placing the agent again.""",
+                stacklevel=2,
+            )
+        placement_func(self, agent, *args, **kwargs)
+
+    return wrapper
+
+
 class _Grid:
     """Base class for a rectangular grid.
 
@@ -135,14 +150,12 @@ class _Grid:
         self._empties_built = True
 
     @overload
-    def __getitem__(self, index: int | Sequence[Coordinate]) -> list[GridContent]:
-        ...
+    def __getitem__(self, index: int | Sequence[Coordinate]) -> list[GridContent]: ...
 
     @overload
     def __getitem__(
         self, index: tuple[int | slice, int | slice]
-    ) -> GridContent | list[GridContent]:
-        ...
+    ) -> GridContent | list[GridContent]: ...
 
     def __getitem__(self, index):
         """Access contents from the grid."""
@@ -405,11 +418,9 @@ class _Grid:
         """
         return list(self.iter_cell_list_contents(cell_list))
 
-    def place_agent(self, agent: Agent, pos: Coordinate) -> None:
-        ...
+    def place_agent(self, agent: Agent, pos: Coordinate) -> None: ...
 
-    def remove_agent(self, agent: Agent) -> None:
-        ...
+    def remove_agent(self, agent: Agent) -> None: ...
 
     def move_agent(self, agent: Agent, pos: Coordinate) -> None:
         """Move an agent from its current position to a new position.
@@ -450,6 +461,7 @@ class _Grid:
                 # Find the closest position without sorting all positions
                 closest_pos = None
                 min_distance = float("inf")
+                agent.random.shuffle(pos)
                 for p in pos:
                     distance = self._distance_squared(p, current_pos)
                     if distance < min_distance:
@@ -763,16 +775,14 @@ class _PropertyGrid(_Grid):
 
     Attributes:
         properties (dict): A dictionary mapping property layer names to PropertyLayer instances.
-        empty_mask: Returns a boolean mask indicating empty cells on the grid.
+        empty_mask (np.ndarray): A boolean array indicating empty cells on the grid.
 
     Methods:
         add_property_layer(property_layer): Adds a new property layer to the grid.
         remove_property_layer(property_name): Removes a property layer from the grid by its name.
         get_neighborhood_mask(pos, moore, include_center, radius): Generates a boolean mask of the neighborhood.
-        select_cells_by_properties(conditions, mask, return_list): Selects cells based on multiple property conditions,
-            optionally with a mask, returning either a list of coordinates or a mask.
-        select_extreme_value_cells(property_name, mode, mask, return_list): Selects cells with extreme values of a property,
-            optionally with a mask, returning either a list of coordinates or a mask.
+        select_cells(conditions, extreme_values, masks, only_empty, return_list): Selects cells based on multiple conditions,
+            extreme values, masks, with an option to select only empty cells, returning either a list of coordinates or a mask.
 
     Mask Usage:
         Several methods in this class accept a mask as an input, which is a NumPy ndarray of boolean values. This mask
@@ -978,6 +988,7 @@ class SingleGrid(_PropertyGrid):
                  the grid for empty spaces.
     """
 
+    @warn_if_agent_has_position_already
     def place_agent(self, agent: Agent, pos: Coordinate) -> None:
         """Place the agent at the specified location, and set its pos variable."""
         if self.is_cell_empty(pos):
@@ -1026,6 +1037,7 @@ class MultiGrid(_PropertyGrid):
         """Default value for new cell elements."""
         return []
 
+    @warn_if_agent_has_position_already
     def place_agent(self, agent: Agent, pos: Coordinate) -> None:
         """Place the agent at the specified location, and set its pos variable."""
         x, y = pos
@@ -1357,6 +1369,7 @@ class ContinuousSpace:
         self._agent_points = None
         self._index_to_agent = {}
 
+    @warn_if_agent_has_position_already
     def place_agent(self, agent: Agent, pos: FloatCoordinate) -> None:
         """Place a new agent in the space.
 
@@ -1517,6 +1530,7 @@ class NetworkGrid:
         """Default value for a new node."""
         return []
 
+    @warn_if_agent_has_position_already
     def place_agent(self, agent: Agent, node_id: int) -> None:
         """Place an agent in a node."""
         self.G.nodes[node_id]["agent"].append(agent)
@@ -1539,9 +1553,11 @@ class NetworkGrid:
             neighborhood = sorted(neighbors_with_distance.keys())
         return neighborhood
 
-    def get_neighbors(self, node_id: int, include_center: bool = False) -> list[Agent]:
-        """Get all agents in adjacent nodes."""
-        neighborhood = self.get_neighborhood(node_id, include_center)
+    def get_neighbors(
+        self, node_id: int, include_center: bool = False, radius: int = 1
+    ) -> list[Agent]:
+        """Get all agents in adjacent nodes (within a certain radius)."""
+        neighborhood = self.get_neighborhood(node_id, include_center, radius)
         return self.get_cell_list_contents(neighborhood)
 
     def move_agent(self, agent: Agent, node_id: int) -> None:

mesa/time.py

@@ -25,9 +25,7 @@ Key concepts:
 # Remove this __future__ import once the oldest supported Python is 3.10
 from __future__ import annotations
 
-import heapq
 import warnings
-import weakref
 from collections import defaultdict
 from collections.abc import Iterable
 
@@ -73,6 +71,8 @@ class BaseScheduler:
         self.model = model
         self.steps = 0
         self.time: TimeT = 0
+        self._original_step = self.step
+        self.step = self._wrapped_step
 
         if agents is None:
             agents = []
@@ -115,6 +115,11 @@ class BaseScheduler:
         self.steps += 1
         self.time += 1
 
+    def _wrapped_step(self):
+        """Wrapper for the step method to include time and step updating."""
+        self._original_step()
+        self.model._advance_time()
+
     def get_agent_count(self) -> int:
         """Returns the current number of agents in the queue."""
         return len(self._agents)
@@ -143,8 +148,8 @@ class BaseScheduler:
 
     def do_each(self, method, shuffle=False):
         if shuffle:
-            self.agents.shuffle(inplace=True)
-        self.agents.do(method)
+            self._agents.shuffle(inplace=True)
+        self._agents.do(method)
 
 
 class RandomActivation(BaseScheduler):
@@ -299,7 +304,7 @@ class RandomActivationByType(BaseScheduler):
 
         agentsbytype = defaultdict(dict)
         for k, v in self._agents_by_type.items():
-            agentsbytype[k] = {agent: agent.unique_id for agent in v}
+            agentsbytype[k] = {agent.unique_id: agent for agent in v}
 
         return agentsbytype
 
@@ -386,46 +391,7 @@ class RandomActivationByType(BaseScheduler):
 
 class DiscreteEventScheduler(BaseScheduler):
     """
-    A scheduler for discrete event simulation in Mesa.
-
-    This scheduler manages events where each event is associated with a
-    specific time and agent. The scheduler advances time not in fixed
-    increments, but to the moment the next event is scheduled to occur.
-
-    This implementation uses a priority queue (heapq) to manage events. Each
-    event is a tuple of the form (time, random_value, agent), where:
-        - time (float): The scheduled time for the event.
-        - random_value (float): A secondary sorting criterion to randomize
-          the order of events that are scheduled for the same time.
-        - agent (Agent): The agent associated with the event.
-
-    The random value for secondary sorting ensures that when two events are
-    scheduled for the same time, their execution order is randomized, thus
-    preventing direct comparison issues between different types of agents and
-    maintaining the integrity of the simulation's randomness.
-
-    Attributes:
-        model (Model): The model instance associated with the scheduler.
-        event_queue (list): A priority queue of scheduled events.
-        time_step (int or float): The fixed time period by which the model advances
-                                  on each step. Defaults to 1.
-
-    Methods:
-        schedule_event(time, agent): Schedule an event for a specific time.
-        schedule_in(delay, agent): Schedule an event after a specified delay.
-        step(): Execute all events within the next time_step period.
-        get_next_event_time(): Returns the time of the next scheduled event.
-
-    Usage:
-        1. Instantiate the DiscreteEventScheduler with a model instance and a time_step period.
-        2. Add agents to the scheduler using schedule.add(). With schedule_now=True (default),
-              the first event for the agent will be scheduled immediately.
-        3. In the Agent step() method, schedule the next event for the agent
-              (using schedule_in or schedule_event).
-        3. Add self.schedule.step() to the model's step() method, as usual.
-
-    Now, with each model step, the scheduler will execute all events within the
-    next time_step period, and advance time one time_step forward.
+    This class has been deprecated and replaced by the functionality provided by experimental.devs
     """
 
     def __init__(self, model: Model, time_step: TimeT = 1) -> None:
@@ -437,72 +403,6 @@ class DiscreteEventScheduler(BaseScheduler):
 
         """
         super().__init__(model)
-        self.event_queue: list[tuple[TimeT, float, weakref.ref]] = []
-        self.time_step: TimeT = time_step  # Fixed time period for each step
-
-        warnings.warn(
-            "The DiscreteEventScheduler is experimental. It may be changed or removed in any and all future releases, including patch releases.\n"
-            "We would love to hear what you think about this new feature. If you have any thoughts, share them with us here: https://github.com/projectmesa/mesa/discussions/1923",
-            FutureWarning,
-            stacklevel=2,
+        raise Exception(
+            "DiscreteEventScheduler is deprecated in favor of the functionality provided by experimental.devs"
         )
-
-    def schedule_event(self, time: TimeT, agent: Agent) -> None:
-        """Schedule an event for an agent at a specific time."""
-        if time < self.time:
-            raise ValueError(
-                f"Scheduled time ({time}) must be >= the current time ({self.time})"
-            )
-        if agent not in self._agents:
-            raise ValueError(
-                "trying to schedule an event for agent which is not known to the scheduler"
-            )
-
-        # Create an event, sorted first on time, secondary on a random value
-        event = (time, self.model.random.random(), weakref.ref(agent))
-        heapq.heappush(self.event_queue, event)
-
-    def schedule_in(self, delay: TimeT, agent: Agent) -> None:
-        """Schedule an event for an agent after a specified delay."""
-        if delay < 0:
-            raise ValueError("Delay must be non-negative")
-        event_time = self.time + delay
-        self.schedule_event(event_time, agent)
-
-    def step(self) -> None:
-        """Execute the next event and advance the time."""
-        end_time = self.time + self.time_step
-
-        while self.event_queue and self.event_queue[0][0] <= end_time:
-            # Get the next event (ignore the random value during unpacking)
-            time, _, agent = heapq.heappop(self.event_queue)
-            agent = agent()  # unpack weakref
-
-            if agent:
-                # Advance time to the event's time
-                self.time = time
-                # Execute the event
-                agent.step()
-
-        # After processing events, advance time by the time_step
-        self.time = end_time
-        self.steps += 1
-
-    def get_next_event_time(self) -> TimeT | None:
-        """Returns the time of the next scheduled event."""
-        if not self.event_queue:
-            return None
-        return self.event_queue[0][0]
-
-    def add(self, agent: Agent, schedule_now: bool = True) -> None:
-        """Add an Agent object to the schedule and optionally schedule its first event.
-
-        Args:
-            agent: An Agent to be added to the schedule. Must have a step() method.
-            schedule_now: If True, schedules the first event for the agent immediately.
-        """
-        super().add(agent)  # Call the add method from BaseScheduler
-
-        if schedule_now:
-            # Schedule the first event immediately
-            self.schedule_event(self.time, agent)

{mesa-2.2.3.dist-info → mesa-2.3.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.3
 Name: Mesa
-Version: 2.2.3
+Version: 2.3.0
 Summary: Agent-based modeling (ABM) in Python
 Project-URL: homepage, https://github.com/projectmesa/mesa
 Project-URL: repository, https://github.com/projectmesa/mesa
@@ -16,6 +16,8 @@ Classifier: Operating System :: OS Independent
 Classifier: Programming Language :: Python :: 3 :: Only
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
 Classifier: Topic :: Scientific/Engineering
 Classifier: Topic :: Scientific/Engineering :: Artificial Intelligence
 Classifier: Topic :: Scientific/Engineering :: Artificial Life
@@ -32,6 +34,7 @@ Requires-Dist: tqdm
 Provides-Extra: dev
 Requires-Dist: coverage; extra == 'dev'
 Requires-Dist: pytest-cov; extra == 'dev'
+Requires-Dist: pytest-mock; extra == 'dev'
 Requires-Dist: pytest>=4.6; extra == 'dev'
 Requires-Dist: ruff~=0.1.1; extra == 'dev'
 Requires-Dist: sphinx; extra == 'dev'
@@ -46,12 +49,12 @@ Description-Content-Type: text/markdown
 
 # Mesa: Agent-based modeling in Python
 
-[![PyPi](https://img.shields.io/pypi/v/mesa.svg)](https://pypi.python.org/pypi/Mesa)
-[![GitHub Actions build status](https://github.com/projectmesa/mesa/workflows/build/badge.svg)](https://github.com/projectmesa/mesa/actions)
-[![Coverage status](https://codecov.io/gh/projectmesa/mesa/branch/main/graph/badge.svg)](https://codecov.io/gh/projectmesa/mesa)
-[![code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black)
-[![chat](https://img.shields.io/matrix/project-mesa:matrix.org?label=chat&logo=Matrix)](https://matrix.to/#/#project-mesa:matrix.org)
-[![Hatch project](https://img.shields.io/badge/%F0%9F%A5%9A-Hatch-4051b5.svg)](https://github.com/pypa/hatch)
+| | |
+| --- | --- |
+| CI/CD | [![GitHub Actions build status](https://github.com/projectmesa/mesa/workflows/build/badge.svg)](https://github.com/projectmesa/mesa/actions) [![Coverage status](https://codecov.io/gh/projectmesa/mesa/branch/main/graph/badge.svg)](https://codecov.io/gh/projectmesa/mesa) |
+| Package | [![PyPI - Version](https://img.shields.io/pypi/v/mesa.svg?logo=pypi&label=PyPI&logoColor=gold)](https://pypi.org/project/Mesa/) [![PyPI - Downloads](https://img.shields.io/pypi/dm/mesa.svg?color=blue&label=Downloads&logo=pypi&logoColor=gold)](https://pypi.org/project/Mesa/) [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/mesa.svg?logo=python&label=Python&logoColor=gold)](https://pypi.org/project/Mesa/) |
+| Meta | [![linting - Ruff](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/ruff/main/assets/badge/v2.json)](https://github.com/astral-sh/ruff) [![code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black) [![Hatch project](https://img.shields.io/badge/%F0%9F%A5%9A-Hatch-4051b5.svg)](https://github.com/pypa/hatch) |
+| Chat | [![chat](https://img.shields.io/matrix/project-mesa:matrix.org?label=chat&logo=Matrix)](https://matrix.to/#/#project-mesa:matrix.org) |
 
 Mesa allows users to quickly create agent-based models using built-in
 core components (such as spatial grids and agent schedulers) or
@@ -160,7 +163,7 @@ If you would like to add a feature, please reach out via [ticket](https://github
 join a dev session (see [Mesa discussions](https://github.com/projectmesa/mesa/discussions)). A feature is most likely
 to be added if you build it!
 
-Don't forget to checkout the [Contributors guide](https://github.com/projectmesa/mesa/blob/main/CONTRIBUTING.rst).
+Don't forget to checkout the [Contributors guide](https://github.com/projectmesa/mesa/blob/main/CONTRIBUTING.md).
 
 ## Citing Mesa
 

mesa-2.3.0.dist-info/RECORD

@@ -0,0 +1,45 @@
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+mesa-2.3.0.dist-info/RECORD,,

{mesa-2.2.3.dist-info → mesa-2.3.0.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: hatchling 1.21.0
+Generator: hatchling 1.24.2
 Root-Is-Purelib: true
 Tag: py3-none-any

mesa-2.2.3.dist-info/RECORD

@@ -1,31 +0,0 @@
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-mesa/agent.py,sha256=tyRUsZTRGEiv8GLEZJ77eH75N0OYyy8DQ3eBFqgRyK8,13047
-mesa/batchrunner.py,sha256=2A1_FbFlSCkDm8xfv1ZamFiBE4VYce8sKP5SR_CledE,6087
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