GANDLF 0.1.4.dev20250708__py3-none-any.whl → 0.1.5.dev20250709__py3-none-any.whl

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Files changed (8) hide show
  1. GANDLF/metrics/segmentation_panoptica.py +4 -0
  2. GANDLF/version.py +1 -1
  3. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/METADATA +1 -1
  4. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/RECORD +8 -8
  5. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/WHEEL +0 -0
  6. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/entry_points.txt +0 -0
  7. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/licenses/LICENSE +0 -0
  8. {gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/top_level.txt +0 -0
GANDLF/metrics/segmentation_panoptica.py CHANGED
@@ -1,4 +1,5 @@
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  from pathlib import Path
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+ import os
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  from typing import Optional
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  import numpy as np
@@ -19,12 +20,15 @@ def generate_instance_segmentation(
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  prediction (np.ndarray): The input prediction containing objects.
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  label_path (str): The path to the reference label.
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  target (np.ndarray): The input target containing objects.
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+ parameters (dict): The GaNDLF parameters from which panoptica config is to be extracted.
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  panoptica_config_path (str): The path to the Panoptica configuration file.
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  Returns:
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  dict: The evaluation results.
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  """
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+ os.environ["PANOPTICA_CITATION_REMINDER"] = "False"
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+
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  # the parameters dict takes precedence over the panoptica_config_path
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  evaluator = parameters.get("panoptica_config", None)
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  if evaluator is None:
GANDLF/version.py CHANGED
@@ -1 +1 @@
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- __version__ = "0.1.4-dev20250708"
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+ __version__ = "0.1.5-dev20250709"
{gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: GANDLF
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- Version: 0.1.4.dev20250708
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+ Version: 0.1.5.dev20250709
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  Summary: PyTorch-based framework that handles segmentation/regression/classification using various DL architectures for medical imaging.
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  Author: MLCommons
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  Author-email: gandlf@mlcommons.org
{gandlf-0.1.4.dev20250708.dist-info → gandlf-0.1.5.dev20250709.dist-info}/RECORD RENAMED
@@ -5,7 +5,7 @@ GANDLF/logger.py,sha256=oamQ1SOTTpAnC8vQ67o211Q6_bExGg_hAuqlHGlJfAI,2951
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  GANDLF/logging_config.yaml,sha256=9XxRxAKtLn5ehT1khpR8wEiJGW64sx1lylAspM5KaWk,1337
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  GANDLF/parseConfig.py,sha256=jO-ybIPxLw23OWDvFdTukbft0ZM8UOofGnoL2C5CEps,754
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  GANDLF/training_manager.py,sha256=AZlf-fl7KAwZgyre8-0M5lAyma6NvtiGX6XT51AJdxU,11436
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- GANDLF/version.py,sha256=Vp_tNj87oFMUfhq8bFWjKKyDLtA1MUtjZq0tQppA5Vk,34
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+ GANDLF/version.py,sha256=mnOEOwW-y5mRKKq51jXVfaB7yp_oCF4ajPpScc4Y6eM,34
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  GANDLF/anonymize/__init__.py,sha256=Nxig-jM-a-aKlK09PNi1zhNulEpLTyjnsY_oGQKdjhQ,1953
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  GANDLF/anonymize/convert_to_nifti.py,sha256=MOfSDncFGJGb-EQP9sFGn0yuKpX010Ioi2KNwttaex8,1339
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  GANDLF/cli/__init__.py,sha256=F05eyL2HKyWkHczRZuPE_Z2Yg685P9ARYxTwz6njGeQ,784
@@ -111,7 +111,7 @@ GANDLF/metrics/metric_calculators.py,sha256=c-NAl84yniTWjMKePBlf0TsCIJnYHODplt8H
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  GANDLF/metrics/panoptica_config_brats.yaml,sha256=mTGSQuJoENuy84gZd2tHV0Dfl7GX5nIeE_46q5Vczx4,2685
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  GANDLF/metrics/regression.py,sha256=Ca58jo9OL1GdjB2ZvQCcrKWz9F67iY5rcbnQxT-LpcU,4584
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  GANDLF/metrics/segmentation.py,sha256=zqWEI6LuphFM0Nsm0sG2XeqAxpNJnoK1Z9q4FJt58c8,25645
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- GANDLF/metrics/segmentation_panoptica.py,sha256=fr9FDlXWXj0hesl6Fz_8EGyDgLvFUoHoCACjk3H3V3k,1434
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+ GANDLF/metrics/segmentation_panoptica.py,sha256=TNphTIU4C3e-hu62sDpRDW_h6_za9g_7TgEjEgaRclE,1598
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  GANDLF/metrics/synthesis.py,sha256=IfYit-R0O5ZUfmsWfLD6BqcLjjoEiotx0lUdsXWlbao,6730
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  GANDLF/models/MSDNet.py,sha256=mzBkw_kQigSDTxaR7tojhdI4ECIQ65i_qiCrNaZmBHI,3442
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  GANDLF/models/__init__.py,sha256=3SwskWonRW1AduPe6CYQWucU8ZBkkfJUpEF34I0NWP0,4286
@@ -182,9 +182,9 @@ GANDLF/utils/parameter_processing.py,sha256=DA7ZEsizWWLJZnCxBnDNh1NyA-bw5oirOvod
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  GANDLF/utils/pred_target_processors.py,sha256=aatXJ6jdJaNAHa_tPzHfC1gOQrPYJLtg-cYeUFvkM_s,2701
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  GANDLF/utils/tensor.py,sha256=AOwNTQfw9mnsomGwOF2Q_rdDS1WANlIatB0hhZN0gSg,21504
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  GANDLF/utils/write_parse.py,sha256=HROxskhet-uIdUJmz16z_7p9r0mf8hWsqQFygwZ8ap0,9202
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- gandlf-0.1.4.dev20250708.dist-info/licenses/LICENSE,sha256=GlZPAfA4eckod8IVayhBXkqCpESXf6cc9BGli_Jwims,11357
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- gandlf-0.1.4.dev20250708.dist-info/METADATA,sha256=ZiyoehdFd6nJ77jG_UXPG519t_rnNdupcTyR08H8wBs,9904
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- gandlf-0.1.4.dev20250708.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- gandlf-0.1.4.dev20250708.dist-info/entry_points.txt,sha256=agwocNI7Upi-sFDe1rMl71dGN8YhCBB7WJmtBHRF4jg,902
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- gandlf-0.1.4.dev20250708.dist-info/top_level.txt,sha256=i5D9wEbQhl085_9Lx2m7x-9Zu6nlx1tjYYbuSihG09E,7
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- gandlf-0.1.4.dev20250708.dist-info/RECORD,,
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+ gandlf-0.1.5.dev20250709.dist-info/licenses/LICENSE,sha256=GlZPAfA4eckod8IVayhBXkqCpESXf6cc9BGli_Jwims,11357
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+ gandlf-0.1.5.dev20250709.dist-info/METADATA,sha256=2E8SDmCeaQXUSBljeHCx3ciqkoDvBlQ-Rw_CPcD_eN4,9904
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+ gandlf-0.1.5.dev20250709.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ gandlf-0.1.5.dev20250709.dist-info/entry_points.txt,sha256=agwocNI7Upi-sFDe1rMl71dGN8YhCBB7WJmtBHRF4jg,902
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+ gandlf-0.1.5.dev20250709.dist-info/top_level.txt,sha256=i5D9wEbQhl085_9Lx2m7x-9Zu6nlx1tjYYbuSihG09E,7
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+ gandlf-0.1.5.dev20250709.dist-info/RECORD,,