EasyFlowQ 1.4.8__py3-none-any.whl

EasyFlowQ/FlowCal/README.md

@@ -0,0 +1,2 @@
+This is a adopted version of the FLowCal library. The orignal code is hosted on https://github.com/ym3141/FlowCal, a fork from https://github.com/taborlab/FlowCal.
+Please refer to the "ReadmeLicense" folder for the original readme and license files.

EasyFlowQ/FlowCal/ReadmeLicense/README.rst

@@ -0,0 +1,24 @@
+===========
+``FlowCal``
+===========
+``FlowCal`` is a library for processing and analyzing flow cytometry data in Python.
+It features:
+
+* Extraction of Flow Cytometry Standard (FCS) files into numpy array-like structures
+* Traditional and non-standard gating, including automatic density-based two-dimensional gating.
+* Traditional transformation functions, such as exponentiation.
+* Analysis of calibration beads data, standard curve generation, and transformation to absolute units (Molecules of Equivalent Fluorophore, MEF).
+* Plotting, including generation of histograms, density plots and scatter plots.
+* A user-fiendly Excel UI to gate, transform, plot, and generate statistics from a list of flow cytometry samples in a simple fashion.
+
+Documentation
+=============
+The official documentation can be found in https://flowcal.readthedocs.io. Here you will find installation instructions, tutorials, and more.
+
+Report Bugs
+===========
+The official way to report a bug is through the issue tracker on github (https://github.com/taborlab/FlowCal/issues). Try to be as explicit as possible when describing your issue. Ideally, a set of instructions to reproduce the error should be provided, together with the version of all the relevant packages you are using.
+
+Request Features
+================
+Features can also be requested through the issue tracker on github. Try to be as descriptive as possible about the desired feature.

EasyFlowQ/FlowCal/ReadmeLicense/license.txt

@@ -0,0 +1,21 @@
+The MIT License (MIT)
+
+Copyright (c) 2015 John Sexton, Brian Landry, Sebastian Castillo-Hair
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

EasyFlowQ/FlowCal/__init__.py

@@ -0,0 +1,17 @@
+"""
+`FlowCal`: Calibration and analysis of flow cytometry data.
+
+"""
+
+# Versions should comply with PEP440.  For a discussion on single-sourcing
+# the version across setup.py and the project code, see
+# https://packaging.python.org/en/latest/single_source_version.html
+__version__ = '1.3.0'
+
+from . import io
+# from . import excel_ui
+# from . import gate
+from . import transform
+# from . import mef
+from . import plot
+# from . import stats