ECOv003-L2T-STARS 1.4.1__py3-none-any.whl → 1.5.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- ECOv003_L2T_STARS/ECOv003_DL.py +5 -5
- ECOv003_L2T_STARS/L2T_STARS.py +30 -28
- ECOv003_L2T_STARS/Manifest.toml +206 -192
- ECOv003_L2T_STARS/constants.py +37 -25
- ECOv003_L2T_STARS/generate_L2T_STARS_runconfig.py +5 -5
- ECOv003_L2T_STARS/generate_NDVI_fine_image.py +2 -2
- ECOv003_L2T_STARS/generate_STARS_inputs.py +3 -3
- ECOv003_L2T_STARS/generate_albedo_fine_image.py +2 -2
- ECOv003_L2T_STARS/main.py +14 -14
- ECOv003_L2T_STARS/process_STARS_product.py +6 -5
- ECOv003_L2T_STARS/retrieve_STARS_sources.py +4 -5
- ECOv003_L2T_STARS/version.txt +1 -1
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/METADATA +2 -2
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/RECORD +18 -18
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/WHEEL +0 -0
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/entry_points.txt +0 -0
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/licenses/LICENSE +0 -0
- {ecov003_l2t_stars-1.4.1.dist-info → ecov003_l2t_stars-1.5.0.dist-info}/top_level.txt +0 -0
ECOv003_L2T_STARS/constants.py
CHANGED
@@ -4,36 +4,48 @@ from os.path import join, abspath, dirname
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L2T_STARS_TEMPLATE = join(abspath(dirname(__file__)), "ECOv003_L2T_STARS.xml")
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# Default directories and parameters for the L2T_STARS processing.
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WORKING_DIRECTORY = "." # Current directory
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BUILD = "0700" # Default build ID
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PRIMARY_VARIABLE = "NDVI" # Primary variable of interest
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OUTPUT_DIRECTORY = "L2T_STARS_output"
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STARS_SOURCES_DIRECTORY = "L2T_STARS_SOURCES"
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STARS_INDICES_DIRECTORY = "L2T_STARS_INDICES"
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STARS_MODEL_DIRECTORY = "L2T_STARS_MODEL"
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STARS_PRODUCTS_DIRECTORY = "STARS_products"
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HLS_DOWNLOAD_DIRECTORY = "HLS2_download"
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LANDSAT_DOWNLOAD_DIRECTORY = "HLS2_download" # Redundant but kept for clarity
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HLS_PRODUCTS_DIRECTORY = "HLS2_products"
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VIIRS_DOWNLOAD_DIRECTORY = "VIIRS_download"
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VIIRS_PRODUCTS_DIRECTORY = "VIIRS_products"
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VIIRS_MOSAIC_DIRECTORY = "VIIRS_mosaic"
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GEOS5FP_DOWNLOAD_DIRECTORY = "GEOS5FP_download"
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GEOS5FP_PRODUCTS_DIRECTORY = "GEOS5FP_products"
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VNP09GA_PRODUCTS_DIRECTORY = "VNP09GA_products"
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VNP43NRT_PRODUCTS_DIRECTORY = "VNP43NRT_products"
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STARS_DOWNSAMPLED_DIRECTORY = "DOWNSAMPLED_products"
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# environment behavior
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INITIALIZE_JULIA = False # Flag to initialize Julia environment
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# Processing parameters
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VIIRS_GIVEUP_DAYS = 4 # Number of days to give up waiting for VIIRS data
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SPINUP_DAYS = 7 # Spin-up period for time-series analysis
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TARGET_RESOLUTION = 70 # Target output resolution in meters
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NDVI_RESOLUTION = 490 # NDVI coarse resolution in meters
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ALBEDO_RESOLUTION = 980 # Albedo coarse resolution in meters
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USE_SPATIAL = False # Flag for using spatial interpolation (currently unused)
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USE_VNP43NRT = True # Flag for using VNP43NRT VIIRS product
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CALIBRATE_FINE = False # Flag for calibrating fine resolution data to coarse
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THREADS = "auto" # Number of threads to use, 'auto' for automatic detection
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WORKERS = 4 # Number of worker processes for parallel processing
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OVERWRITE = False # Flag to overwrite existing files
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SOURCES_ONLY = False # Flag to only process sources without further analysis
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REMOVE_INPUT_STAGING = True # Flag to remove input staging files after processing
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# Product short and long names
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L2T_STARS_SHORT_NAME = "ECO_L2T_STARS"
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L2T_STARS_LONG_NAME = "ECOSTRESS Tiled Auxiliary NDVI and Albedo L2 Global 70 m"
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# prior and posterior model state behavior
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REMOVE_PRIOR = True
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REMOVE_POSTERIOR = True
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@@ -98,7 +98,7 @@ def generate_L2T_STARS_runconfig(
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# Set default values for other parameters if not provided
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if build is None:
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build =
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build = BUILD
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if working_directory is None:
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working_directory = "."
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@@ -155,11 +155,11 @@ def generate_L2T_STARS_runconfig(
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# Resolve absolute paths for various directories if not already defined
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working_directory = abspath(expanduser(working_directory))
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if sources_directory is None:
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sources_directory = join(working_directory,
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sources_directory = join(working_directory, STARS_SOURCES_DIRECTORY)
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if indices_directory is None:
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indices_directory = join(working_directory,
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indices_directory = join(working_directory, STARS_INDICES_DIRECTORY)
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if model_directory is None:
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model_directory = join(working_directory,
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model_directory = join(working_directory, STARS_MODEL_DIRECTORY)
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# Determine executable path; fall back to just the name if not found in PATH
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if executable_filename is None:
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# Define output and log file paths
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if output_directory is None:
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output_directory = join(working_directory,
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output_directory = join(working_directory, OUTPUT_DIRECTORY)
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output_directory = abspath(expanduser(output_directory))
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if log_filename is None:
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log_filename = join(working_directory, "log", f"{granule_ID}.log")
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@@ -4,12 +4,12 @@ import numpy as np
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import rasters as rt
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from rasters import Raster
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from harmonized_landsat_sentinel import
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from harmonized_landsat_sentinel import HLS2Connection
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def generate_NDVI_fine_image(
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date_UTC: Union[date, str],
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tile: str,
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HLS_connection:
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HLS_connection: HLS2Connection) -> Raster:
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"""
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Generates a fine-resolution NDVI image from HLS data.
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@@ -6,7 +6,7 @@ import logging
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import colored_logging as cl
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from rasters import Raster, RasterGeometry
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from harmonized_landsat_sentinel import
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from harmonized_landsat_sentinel import HLS2Connection
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from ECOv003_exit_codes import AuxiliaryLatency
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@@ -36,7 +36,7 @@ def generate_STARS_inputs(
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NDVI_coarse_geometry: RasterGeometry,
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albedo_coarse_geometry: RasterGeometry,
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downsampled_directory: str,
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HLS_connection:
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HLS_connection: HLS2Connection,
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NDVI_VIIRS_connection: VIIRSDownloaderNDVI,
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albedo_VIIRS_connection: VIIRSDownloaderAlbedo,
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calibrate_fine: bool = False,
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NDVI_fine_directory (str): Directory for staging fine NDVI images.
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albedo_coarse_directory (str): Directory for staging coarse albedo images.
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albedo_fine_directory (str): Directory for staging fine albedo images.
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HLS_connection (
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HLS_connection (HLS2Connection): An initialized HLS data connection object.
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NDVI_VIIRS_connection (VIIRSDownloaderNDVI): An initialized VIIRS NDVI downloader.
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albedo_VIIRS_connection (VIIRSDownloaderAlbedo): An initialized VIIRS albedo downloader.
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calibrate_fine (bool, optional): If True, calibrate fine images to coarse images.
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import rasters as rt
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from rasters import Raster
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from harmonized_landsat_sentinel import
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from harmonized_landsat_sentinel import HLS2Connection
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def generate_albedo_fine_image(
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date_UTC: Union[date, str],
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tile: str,
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HLS_connection:
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HLS_connection: HLS2Connection) -> Raster:
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"""
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Generates a fine-resolution albedo image from HLS data.
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ECOv003_L2T_STARS/main.py
CHANGED
@@ -46,36 +46,36 @@ def main():
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parser.add_argument(
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"--spinup-days",
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type=int,
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default=
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help=f"Number of days for the VIIRS time-series spin-up. Defaults to {
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default=SPINUP_DAYS,
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help=f"Number of days for the VIIRS time-series spin-up. Defaults to {SPINUP_DAYS} days.",
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metavar="DAYS"
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)
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parser.add_argument(
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"--target-resolution",
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type=int,
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default=
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help=f"Desired output product resolution in meters. Defaults to {
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default=TARGET_RESOLUTION,
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help=f"Desired output product resolution in meters. Defaults to {TARGET_RESOLUTION}m.",
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metavar="METERS"
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)
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parser.add_argument(
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"--ndvi-resolution",
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type=int,
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default=
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help=f"Resolution of coarse NDVI data in meters. Defaults to {
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default=NDVI_RESOLUTION,
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help=f"Resolution of coarse NDVI data in meters. Defaults to {NDVI_RESOLUTION}m.",
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metavar="METERS"
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)
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parser.add_argument(
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"--albedo-resolution",
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type=int,
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default=
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help=f"Resolution of coarse albedo data in meters. Defaults to {
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default=ALBEDO_RESOLUTION,
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help=f"Resolution of coarse albedo data in meters. Defaults to {ALBEDO_RESOLUTION}m.",
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metavar="METERS"
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)
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parser.add_argument(
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"--use-vnp43nrt",
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action="store_true",
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default=
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help=f"Use VNP43NRT for VIIRS products. Defaults to {'True' if
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default=USE_VNP43NRT,
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help=f"Use VNP43NRT for VIIRS products. Defaults to {'True' if USE_VNP43NRT else 'False'}.",
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)
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parser.add_argument(
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"--no-vnp43nrt",
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parser.add_argument(
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"--calibrate-fine",
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action="store_true",
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default=
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help=f"Calibrate fine resolution HLS data to coarse resolution VIIRS data. Defaults to {'True' if
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default=CALIBRATE_FINE,
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help=f"Calibrate fine resolution HLS data to coarse resolution VIIRS data. Defaults to {'True' if CALIBRATE_FINE else 'False'}.",
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parser.add_argument(
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"--sources-only",
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"--no-remove-prior",
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action="store_false",
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dest="remove_prior",
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default=
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default=REMOVE_PRIOR,
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help="Do NOT remove prior intermediate files after use.",
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)
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parser.add_argument(
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"--no-remove-posterior",
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action="store_false",
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dest="remove_posterior",
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default=
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default=REMOVE_POSTERIOR,
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help="Do NOT remove posterior intermediate files after product generation.",
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)
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parser.add_argument(
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from harmonized_landsat_sentinel import
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from harmonized_landsat_sentinel import HLS2Connection
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from ECOv003_granules import L2TSTARS, NDVI_COLORMAP, ALBEDO_COLORMAP
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from ECOv003_exit_codes import BlankOutput
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from .constants import *
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from .VIIRS import VIIRSDownloaderNDVI, VIIRSDownloaderAlbedo
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from .generate_model_state_tile_date_directory import generate_model_state_tile_date_directory
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from .generate_STARS_inputs import generate_STARS_inputs
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L2T_STARS_browse_filename: str,
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metadata: dict,
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prior: Prior,
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HLS_connection:
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HLS_connection: HLS2Connection,
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NDVI_VIIRS_connection: VIIRSDownloaderNDVI,
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albedo_VIIRS_connection: VIIRSDownloaderAlbedo,
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using_prior: bool = False,
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calibrate_fine: bool = False,
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remove_input_staging: bool = True,
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remove_prior: bool =
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remove_posterior: bool =
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remove_prior: bool = REMOVE_PRIOR,
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remove_posterior: bool = REMOVE_POSTERIOR,
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initialize_julia: bool = False,
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threads: Union[int, str] = "auto",
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num_workers: int = 4,
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L2T_STARS_browse_filename (str): Final path for the browse image.
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metadata (dict): Dictionary containing product metadata.
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prior (Prior): An object containing information about the prior product.
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HLS_connection (
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HLS_connection (HLS2Connection): An initialized HLS data connection object.
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NDVI_VIIRS_connection (VIIRSDownloaderNDVI): An initialized VIIRS NDVI downloader.
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albedo_VIIRS_connection (VIIRSDownloaderAlbedo): An initialized VIIRS albedo downloader.
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using_prior (bool, optional): If True, use the prior product in fusion. Defaults to False.
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from harmonized_landsat_sentinel import
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from harmonized_landsat_sentinel import HLS2Connection
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HLSTileNotAvailable,
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HLS_end_date: date,
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VIIRS_start_date: date,
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VIIRS_end_date: date,
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HLS_connection:
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VIIRS_connection: VNP43NRT
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):
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HLS_connection: HLS2Connection,
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VIIRS_connection: VNP43NRT):
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"""
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Retrieves necessary Harmonized Landsat Sentinel (HLS) and VIIRS source data.
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HLS_end_date (date): The end date for HLS data retrieval.
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VIIRS_start_date (date): The start date for VIIRS data retrieval.
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VIIRS_end_date (date): The end date for VIIRS data retrieval.
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HLS_connection (
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HLS_connection (HLS2Connection): An initialized HLS data connection object.
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VIIRS_connection (VNP43NRT): An initialized VIIRS data connection object
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(can be VNP43NRT, VNP43IA4, or VNP43MA3).
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ECOv003_L2T_STARS/version.txt
CHANGED
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1.5.0
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Metadata-Version: 2.4
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Name: ECOv003-L2T-STARS
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Version: 1.
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Version: 1.5.0
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Summary: ECOSTRESS Collection 3 JPL STARS Data Fusion Product Generating Executable (PGE)
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Author-email: "Gregory H. Halverson" <gregory.h.halverson@jpl.nasa.gov>
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Project-URL: Homepage, https://github.com/ECOSTRESS-Collection-3/ECOv003-L2T-STARS
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Requires-Dist: ECOv003-exit-codes>=1.1.0
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Requires-Dist: GEOS5FP
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Requires-Dist: h5py
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Requires-Dist: harmonized-landsat-sentinel>=
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Requires-Dist: harmonized-landsat-sentinel>=2.0.0
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Requires-Dist: matplotlib
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Requires-Dist: modland
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Requires-Dist: numpy
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@@ -1,21 +1,21 @@
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ECOv003_L2T_STARS/ECOv003_DL.py,sha256=
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ECOv003_L2T_STARS/ECOv003_DL.py,sha256=QEjs6PpQr14-_AtdbK45yE7jv147SwxUmPWLdTp_wAo,24550
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ECOv003_L2T_STARS/ECOv003_DL.xml,sha256=TQxOlTJHnjcRf9RiAGVJe2mIS-ks6WL32Ze33z0_kxA,2032
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ECOv003_L2T_STARS/ECOv003_L2T_STARS.xml,sha256=Sg6GJx5PO1TVMIpGCDb4gatcShLRa6yBMwxwHKAWNKw,2084
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ECOv003_L2T_STARS/L2TSTARSConfig.py,sha256=pH5WAzjfUdlam8Ngi2hxmT8Sect5bi2D6cP9HbpM_Tw,8849
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ECOv003_L2T_STARS/L2T_STARS.py,sha256=
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ECOv003_L2T_STARS/Manifest.toml,sha256=
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ECOv003_L2T_STARS/L2T_STARS.py,sha256=MNh8OiWKjg6SdhZmGARISv23R4JSzRkVriGkVRrxYoo,24637
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ECOv003_L2T_STARS/Manifest.toml,sha256=pj6osNOWzlL8-wtY4MDdp7rbWvDxCH-LgoXfBdZKRT0,84454
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ECOv003_L2T_STARS/Project.toml,sha256=9-grsavASN_a3dNHcG4vc6-iulhK6Gdmmh1VkKRxnGM,471
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ECOv003_L2T_STARS/__init__.py,sha256=fdYigR4HXHd-NYUCafBD4GTqXUQV5LK337bJVN556fA,91
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ECOv003_L2T_STARS/calibrate_fine_to_coarse.py,sha256=2YQHo0hO5EuvGt6TOF_1WypiqNDAR5gjvs0cYe9F_vQ,2345
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ECOv003_L2T_STARS/cksum.py,sha256=Cw3FHD39Osrb4c9Dc1jSUB1SZaxIJsWHqsNVeWwYokA,1823
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ECOv003_L2T_STARS/constants.py,sha256=-
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ECOv003_L2T_STARS/constants.py,sha256=-JRey6bpnzvwepQBoDzARZ6DJOZSdueTfkfkuBkig_0,2393
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ECOv003_L2T_STARS/exceptions.py,sha256=ypahdRaZVMIoQrHUIZXiwzDNeLaCH46rUAfs_8MHKBE,48
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ECOv003_L2T_STARS/generate_L2T_STARS_runconfig.py,sha256=
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ECOv003_L2T_STARS/generate_L2T_STARS_runconfig.py,sha256=yTRBcjfcePnvaZjol3HMPqK_SmuVHMQPXK2VYfE3ef4,11102
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ECOv003_L2T_STARS/generate_NDVI_coarse_image.py,sha256=9XBBV1FFqjxkEFnr61xr9R2tnHQAlx2XN9KzLN8RApc,1215
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ECOv003_L2T_STARS/generate_NDVI_fine_image.py,sha256=
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ECOv003_L2T_STARS/generate_STARS_inputs.py,sha256=
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ECOv003_L2T_STARS/generate_NDVI_fine_image.py,sha256=lLh_BHhO6seJdeg3FKaVRzoKXKuWQK80nbxPPkGnFVE,933
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ECOv003_L2T_STARS/generate_STARS_inputs.py,sha256=k4pMRRlvJCExmsjA_9SGSG6sTi4pejdCL1OIkxli47E,11156
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ECOv003_L2T_STARS/generate_albedo_coarse_image.py,sha256=nBOKiWVsRnQ2TeOktWVfZbwVy9cOCa2QeP_8H0QDWrA,1162
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ECOv003_L2T_STARS/generate_albedo_fine_image.py,sha256=
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ECOv003_L2T_STARS/generate_albedo_fine_image.py,sha256=u5VLj5HxBtpXxciy4VA1u9He7eLsLpiouQqWi25exVg,945
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ECOv003_L2T_STARS/generate_downsampled_filename.py,sha256=rAAEYehfME6G6k0KkJgj4H9itmQNh-vVTIXauFiTHtk,675
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ECOv003_L2T_STARS/generate_filename.py,sha256=XppMoRiKBG1Rf-uWu95UCO1klK6uv5GdK9pvg3gDmnk,1359
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ECOv003_L2T_STARS/generate_input_staging_directory.py,sha256=TlFKYliu6BbfDGLlwD0nlt0AZzDwKWeEgeTtzmicElY,800
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@@ -24,15 +24,15 @@ ECOv003_L2T_STARS/generate_output_directory.py,sha256=Dr1zX6ljYzxFgC9XkocYBiF5aM
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ECOv003_L2T_STARS/instantiate_STARSDataFusion_jl.py,sha256=B-N_tlSBY7DQ2gZK6mPtJ8WL8XCXA_edMDEOu2xldcs,1437
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ECOv003_L2T_STARS/load_prior.py,sha256=e26JqLhcr2V5FW_02qduUbRlEZc6pTf3jIAAT5Sog0s,11125
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ECOv003_L2T_STARS/login.py,sha256=zInQL33NibC8fNGzLw9qk0MDay71KYk87V-UsV-gkwA,1945
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ECOv003_L2T_STARS/main.py,sha256=
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ECOv003_L2T_STARS/main.py,sha256=FjLTfN6tk-CaVBDwT5OlYxc8m-0bQZbniXx-6881MhA,6055
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ECOv003_L2T_STARS/prior.py,sha256=fLE54pBIOG6sCas1G60nhn8LcHa2AqZ_eSY_J-MB4eM,2867
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ECOv003_L2T_STARS/process_ECOSTRESS_data_fusion_distributed_bias.jl,sha256=OuMd-Y_zNQJStecIPRwz9_5N5Loh8JVmkhBLFu1nlNs,16089
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ECOv003_L2T_STARS/process_STARS_product.py,sha256=
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ECOv003_L2T_STARS/process_STARS_product.py,sha256=yg8m8DaH76doKIRCl_9kd-rXGqfi_JCZHF23NoxatMI,21948
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ECOv003_L2T_STARS/process_julia_data_fusion.py,sha256=lpChy2WJBQAvaJXa3PJFLwItQzlRqj1Z13EBaQLB40s,5341
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ECOv003_L2T_STARS/retrieve_STARS_sources.py,sha256=
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ECOv003_L2T_STARS/retrieve_STARS_sources.py,sha256=jP4IXJK4XSYj4Yp0zfWIrYXTbHfGBvge0h2yEznIPNY,3802
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ECOv003_L2T_STARS/runconfig.py,sha256=TLaB3w6Y0qEZPqMa-YXuUzKSACrdpKmrozUNLh70aQw,1519
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ECOv003_L2T_STARS/version.py,sha256=CcCeNt2pNqb8AQ_vHLUbLJciE8hxTMeGmN79vAYObYQ,354
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ECOv003_L2T_STARS/version.txt,sha256=
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ECOv003_L2T_STARS/version.txt,sha256=H03AltWPfSHjh1ZxrubymxIKuEIY-kfbLLU7yetbTaw,5
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ECOv003_L2T_STARS/BRDF/BRDF.py,sha256=41MCtcddMEd8cmW2K9wWyg71nkKjnom3Z64KX5NMehg,1532
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ECOv003_L2T_STARS/BRDF/SZA.py,sha256=_J5ybmrg8ASVglXp4OvSoVutkDVeSxDBygfTe848sww,2529
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ECOv003_L2T_STARS/BRDF/__init__.py,sha256=7HYw9eTuudpkgtpXAjFN1CpPjr6R9JsnW3bLtNBdRSM,20
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@@ -63,9 +63,9 @@ ECOv003_L2T_STARS/daterange/__init__.py,sha256=54kYb9tmsm5twxMqjJKeD__5kGkNDz3Pp
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ECOv003_L2T_STARS/daterange/daterange.py,sha256=EHa2Xt9fiJ1gbX7aa_QV_br1rAXjg3pHrLSRasOsOhM,959
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ECOv003_L2T_STARS/timer/__init__.py,sha256=I_MQKp_aamBLUzZv0psEbRgs6GZLOJd4mmJ7bli0Ikc,21
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ECOv003_L2T_STARS/timer/timer.py,sha256=tn5e3NQmsh55Jp9Fstjf-8KJW4F8UIJs-d_ZLooFYE8,1610
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ecov003_l2t_stars-1.
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ecov003_l2t_stars-1.
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ecov003_l2t_stars-1.
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ecov003_l2t_stars-1.
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ecov003_l2t_stars-1.
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ecov003_l2t_stars-1.5.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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ecov003_l2t_stars-1.5.0.dist-info/METADATA,sha256=77RjSIXBPK4I-_mYfeOAksUrf3h7J8B-ZZDULpp0UgQ,13283
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ecov003_l2t_stars-1.5.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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ecov003_l2t_stars-1.5.0.dist-info/entry_points.txt,sha256=EVVKltKsqXBc94JIu4IjVrMP0DPqaNEdQoAgcZOApQQ,106
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ecov003_l2t_stars-1.5.0.dist-info/top_level.txt,sha256=lRivA5MjbrabH4sv-LUstMGaLZ865wRQPpz9Kh6-plg,18
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ecov003_l2t_stars-1.5.0.dist-info/RECORD,,
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