CytoTable 0.0.14__py3-none-any.whl → 0.0.16__py3-none-any.whl

cytotable/__init__.py

@@ -3,7 +3,19 @@ __init__.py for cytotable
 """
 
 # note: version data is maintained by poetry-dynamic-versioning (do not edit)
-__version__ = "0.0.14"
+__version__ = "0.0.16"
+
+# filter warnings about pkg_resources deprecation
+# note: these stem from cloudpathlib google cloud
+# dependencies.
+import warnings
+
+warnings.filterwarnings(
+    "ignore",
+    message=(".*pkg_resources is deprecated as an API.*"),
+    category=UserWarning,
+    module="google_crc32c.__config__",
+)
 
 from .convert import convert
 from .exceptions import (

cytotable/convert.py

@@ -1653,4 +1653,7 @@ def convert(  # pylint: disable=too-many-arguments,too-many-locals
             **kwargs,
         )
 
+    # cleanup Parsl executor and related
+    parsl.dfk().cleanup()
+
     return output

cytotable/utils.py

@@ -166,12 +166,6 @@ def _duckdb_reader() -> duckdb.DuckDBPyConnection:
         https://duckdb.org/docs/sql/configuration#configuration-reference
         */
         PRAGMA preserve_insertion_order=FALSE;
-
-        /*
-        Disable progress bar from displaying (defaults to TRUE)
-        See earlier documentation references above for more information.
-        */
-        SET enable_progress_bar=FALSE;
         """,
     )
 

{cytotable-0.0.14.dist-info → cytotable-0.0.16.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: CytoTable
-Version: 0.0.14
+Version: 0.0.16
 Summary: Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.
 License: BSD-3-Clause License
 Keywords: python,cellprofiler,single-cell-analysis,way-lab

cytotable-0.0.16.dist-info/RECORD

@@ -0,0 +1,11 @@
+cytotable/__init__.py,sha256=vmv5EJuGq_uT2rxWTNSQqFC9O2vrmc9veRIc1Q1nGkM,615
+cytotable/constants.py,sha256=w_AUm_fKKXeZjnZxbHf-dxq7NN7BkvCWbkGK24sfzLw,1872
+cytotable/convert.py,sha256=uvdUM5-_cQCuTYA2RtWoA1_ZuGFmMQZUayChTRUWd5A,62916
+cytotable/exceptions.py,sha256=NhkMswjCB0HeVHqlLXzBlyHunQIp_4eBFmyAPu0Nf30,482
+cytotable/presets.py,sha256=pWYyZsEP-C1zbMUjTMzcJxCeRHcVpAAI-gMV2Nx-6Zc,16459
+cytotable/sources.py,sha256=lScB3GPTIqDjl2Iea5zivjCEll9zYxJt1gIfj4WbCpQ,12959
+cytotable/utils.py,sha256=Odlgp_ggeKrHd18v-v9FRiksybEF4JxwzWCXTp9FQ-o,28738
+cytotable-0.0.16.dist-info/LICENSE,sha256=lPK3PtUMP-f1EOFMUr8h3FvuMh89x249Hvm4lchTsv0,1528
+cytotable-0.0.16.dist-info/METADATA,sha256=9rHyyCeCJJ5DZfHKXl4eQCggVv9_LOf0lBUwNCSwTUY,3866
+cytotable-0.0.16.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+cytotable-0.0.16.dist-info/RECORD,,

{cytotable-0.0.14.dist-info → cytotable-0.0.16.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.2
+Generator: poetry-core 2.1.3
 Root-Is-Purelib: true
 Tag: py3-none-any

cytotable-0.0.14.dist-info/RECORD

@@ -1,11 +0,0 @@
-cytotable/__init__.py,sha256=7T2LQKZ2c628lj90EOk1oAPF-L0IvHS43PXLfsp-_mc,316
-cytotable/constants.py,sha256=w_AUm_fKKXeZjnZxbHf-dxq7NN7BkvCWbkGK24sfzLw,1872
-cytotable/convert.py,sha256=-LR-BQDew04VyuV2wtU831AAVfmWKe0h-65E3UAzGe0,62848
-cytotable/exceptions.py,sha256=NhkMswjCB0HeVHqlLXzBlyHunQIp_4eBFmyAPu0Nf30,482
-cytotable/presets.py,sha256=pWYyZsEP-C1zbMUjTMzcJxCeRHcVpAAI-gMV2Nx-6Zc,16459
-cytotable/sources.py,sha256=lScB3GPTIqDjl2Iea5zivjCEll9zYxJt1gIfj4WbCpQ,12959
-cytotable/utils.py,sha256=nH5CBY8thWS6eJtl_SZ059GmcE4rUExZMWelVgjZvho,28937
-cytotable-0.0.14.dist-info/LICENSE,sha256=lPK3PtUMP-f1EOFMUr8h3FvuMh89x249Hvm4lchTsv0,1528
-cytotable-0.0.14.dist-info/METADATA,sha256=8Rb-JIBc63Vvu8SYjGIa-pwAf4rZbGck4hyHlmC8c9s,3866
-cytotable-0.0.14.dist-info/WHEEL,sha256=fGIA9gx4Qxk2KDKeNJCbOEwSrmLtjWCwzBz351GyrPQ,88
-cytotable-0.0.14.dist-info/RECORD,,