CUQIpy 1.1.1.post0.dev88__py3-none-any.whl → 1.1.1.post0.dev90__py3-none-any.whl

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Files changed (7) hide show
  1. {CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/METADATA +1 -1
  2. {CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/RECORD +7 -7
  3. cuqi/_version.py +3 -3
  4. cuqi/experimental/mcmc/_gibbs.py +6 -2
  5. {CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/LICENSE +0 -0
  6. {CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/WHEEL +0 -0
  7. {CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/top_level.txt +0 -0
{CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: CUQIpy
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- Version: 1.1.1.post0.dev88
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+ Version: 1.1.1.post0.dev90
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  Summary: Computational Uncertainty Quantification for Inverse problems in Python
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  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
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  License: Apache License
{CUQIpy-1.1.1.post0.dev88.dist-info → CUQIpy-1.1.1.post0.dev90.dist-info}/RECORD RENAMED
@@ -1,6 +1,6 @@
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  cuqi/__init__.py,sha256=LsGilhl-hBLEn6Glt8S_l0OJzAA1sKit_rui8h-D-p0,488
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  cuqi/_messages.py,sha256=fzEBrZT2kbmfecBBPm7spVu7yHdxGARQB4QzXhJbCJ0,415
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- cuqi/_version.py,sha256=e_QZVDs4Ghsydhv_8hA8XZc-XAwhd-C2wDPTDYDbhSg,509
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+ cuqi/_version.py,sha256=T4zJHk9GS-Zo_rUrR4df7lzaYMb3K6uUw1dTyP6i5F8,509
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  cuqi/config.py,sha256=wcYvz19wkeKW2EKCGIKJiTpWt5kdaxyt4imyRkvtTRA,526
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  cuqi/diagnostics.py,sha256=5OrbJeqpynqRXOe5MtOKKhe7EAVdOEpHIqHnlMW9G_c,3029
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  cuqi/array/__init__.py,sha256=-EeiaiWGNsE3twRS4dD814BIlfxEsNkTCZUc5gjOXb0,30
@@ -39,7 +39,7 @@ cuqi/experimental/mcmc/_conjugate.py,sha256=VNPQkGity0mposcqxrx4UIeXm35EvJvZED4p
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  cuqi/experimental/mcmc/_conjugate_approx.py,sha256=uEnY2ea9su5ivcNagyRAwpQP2gBY98sXU7N0y5hTADo,3653
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  cuqi/experimental/mcmc/_cwmh.py,sha256=BQE7-4kbiC32TJ38rlVtfSQieoKBK5GDca3HCqHJ7zE,7135
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  cuqi/experimental/mcmc/_direct.py,sha256=9pQS_2Qk2-ybt6m8WTfPoKetcxQ00WaTRN85-Z0FrBY,777
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- cuqi/experimental/mcmc/_gibbs.py,sha256=_y1YO2t7sTM6UkJVTr6UFkkc0_IhOOyscp6V-6sEf9o,12646
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+ cuqi/experimental/mcmc/_gibbs.py,sha256=a_Zr007F233R6A3CJ_0zlQppsQrVuX8-oWCbNJWJxmA,12745
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  cuqi/experimental/mcmc/_hmc.py,sha256=h63KT0jYq86H541hQzhHHzuLEn7vrRE_2r1o1mTEcZo,19261
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  cuqi/experimental/mcmc/_langevin_algorithm.py,sha256=GKC_mlix3si_3J8E6I58ozh3ErB0XPmHMjV7sFyKLEQ,8200
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  cuqi/experimental/mcmc/_laplace_approximation.py,sha256=rdiE3cMQFq6FLQcOQwPpuGIxrTAp3aoGPxMDSdeopV0,5688
@@ -85,8 +85,8 @@ cuqi/testproblem/_testproblem.py,sha256=x769LwwRdJdzIiZkcQUGb_5-vynNTNALXWKato7s
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  cuqi/utilities/__init__.py,sha256=H7xpJe2UinjZftKvE2JuXtTi4DqtkR6uIezStAXwfGg,428
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  cuqi/utilities/_get_python_variable_name.py,sha256=QwlBVj2koJRA8s8pWd554p7-ElcI7HUwY32HknaR92E,1827
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  cuqi/utilities/_utilities.py,sha256=Jc4knn80vLoA7kgw9FzXwKVFGaNBOXiA9kgvltZU3Ao,11777
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- CUQIpy-1.1.1.post0.dev88.dist-info/LICENSE,sha256=kJWRPrtRoQoZGXyyvu50Uc91X6_0XRaVfT0YZssicys,10799
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- CUQIpy-1.1.1.post0.dev88.dist-info/METADATA,sha256=8v_xUJk5_49u7a_Bj5juCvOZijz2UTO8oIUnqUGJnuI,18410
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- CUQIpy-1.1.1.post0.dev88.dist-info/WHEEL,sha256=cVxcB9AmuTcXqmwrtPhNK88dr7IR_b6qagTj0UvIEbY,91
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- CUQIpy-1.1.1.post0.dev88.dist-info/top_level.txt,sha256=AgmgMc6TKfPPqbjV0kvAoCBN334i_Lwwojc7HE3ZwD0,5
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- CUQIpy-1.1.1.post0.dev88.dist-info/RECORD,,
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+ CUQIpy-1.1.1.post0.dev90.dist-info/LICENSE,sha256=kJWRPrtRoQoZGXyyvu50Uc91X6_0XRaVfT0YZssicys,10799
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+ CUQIpy-1.1.1.post0.dev90.dist-info/METADATA,sha256=-Bz6Ib4nK13LCqO_7m0g81twfiggb13wfVF37W0Kqo4,18410
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+ CUQIpy-1.1.1.post0.dev90.dist-info/WHEEL,sha256=cVxcB9AmuTcXqmwrtPhNK88dr7IR_b6qagTj0UvIEbY,91
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+ CUQIpy-1.1.1.post0.dev90.dist-info/top_level.txt,sha256=AgmgMc6TKfPPqbjV0kvAoCBN334i_Lwwojc7HE3ZwD0,5
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+ CUQIpy-1.1.1.post0.dev90.dist-info/RECORD,,
cuqi/_version.py CHANGED
@@ -8,11 +8,11 @@ import json
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  version_json = '''
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  {
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- "date": "2024-09-12T22:06:24+0200",
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+ "date": "2024-09-13T08:36:06+0200",
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  "dirty": false,
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  "error": null,
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- "full-revisionid": "f2fb34068f8c84bf37b3e4049a8a77391d3c432e",
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- "version": "1.1.1.post0.dev88"
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+ "full-revisionid": "22a43b19a36622c11b96970eff2e8ab6776a7142",
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+ "version": "1.1.1.post0.dev90"
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  }
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  ''' # END VERSION_JSON
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cuqi/experimental/mcmc/_gibbs.py CHANGED
@@ -66,7 +66,7 @@ class HybridGibbs:
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  import numpy as np
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  # Model and data
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- A, y_obs, probinfo = cuqi.testproblem.Deconvolution1D(phantom='square').get_components()
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+ A, y_obs, probinfo = cuqi.testproblem.Deconvolution1D(phantom='sinc').get_components()
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  n = A.domain_dim
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  # Define distributions
@@ -90,7 +90,11 @@ class HybridGibbs:
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  sampler = cuqi.experimental.mcmc.HybridGibbs(posterior, sampling_strategy)
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  # Run sampler
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- samples = sampler.sample(Ns=1000, Nb=200)
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+ sampler.warmup(200)
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+ sampler.sample(1000)
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+
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+ # Get samples removing burn-in
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+ samples = sampler.get_samples().burnthin(200)
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  # Plot results
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  samples['x'].plot_ci(exact=probinfo.exactSolution)