BibexPy 2.0.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (171) hide show
  1. bibex_core/MergeDB.py +1189 -0
  2. bibex_core/__init__.py +13 -0
  3. bibex_core/modules/__init__.py +35 -0
  4. bibex_core/modules/api_utils.py +1172 -0
  5. bibex_core/modules/c1_utils.py +423 -0
  6. bibex_core/modules/file_utils.py +71 -0
  7. bibex_core/modules/ml_utils.py +332 -0
  8. bibex_core/modules/post_process.py +50 -0
  9. bibex_core/modules/stats_utils.py +216 -0
  10. bibex_core/scp2xlsx.py +235 -0
  11. bibex_core/wos2xlsx.py +159 -0
  12. bibex_core/xlsx2vos.py +185 -0
  13. bibexpy/__init__.py +9 -0
  14. bibexpy/__main__.py +6 -0
  15. bibexpy/_server/__init__.py +1 -0
  16. bibexpy/_server/config.py +92 -0
  17. bibexpy/_server/jobs/__init__.py +3 -0
  18. bibexpy/_server/jobs/runner.py +301 -0
  19. bibexpy/_server/main.py +211 -0
  20. bibexpy/_server/models/__init__.py +0 -0
  21. bibexpy/_server/models/project.py +25 -0
  22. bibexpy/_server/routers/__init__.py +0 -0
  23. bibexpy/_server/routers/audit.py +65 -0
  24. bibexpy/_server/routers/convert.py +101 -0
  25. bibexpy/_server/routers/disambiguate.py +177 -0
  26. bibexpy/_server/routers/downloads.py +26 -0
  27. bibexpy/_server/routers/enrich.py +42 -0
  28. bibexpy/_server/routers/export.py +116 -0
  29. bibexpy/_server/routers/export_folder.py +97 -0
  30. bibexpy/_server/routers/filter.py +131 -0
  31. bibexpy/_server/routers/jobs.py +72 -0
  32. bibexpy/_server/routers/merge.py +437 -0
  33. bibexpy/_server/routers/prepare.py +241 -0
  34. bibexpy/_server/routers/projects.py +49 -0
  35. bibexpy/_server/routers/quality.py +288 -0
  36. bibexpy/_server/routers/records.py +204 -0
  37. bibexpy/_server/routers/report.py +111 -0
  38. bibexpy/_server/routers/settings.py +383 -0
  39. bibexpy/_server/routers/system.py +209 -0
  40. bibexpy/_server/routers/tools.py +257 -0
  41. bibexpy/_server/routers/upload.py +110 -0
  42. bibexpy/_server/services/__init__.py +0 -0
  43. bibexpy/_server/services/analyses.py +364 -0
  44. bibexpy/_server/services/audit.py +340 -0
  45. bibexpy/_server/services/bibex_adapter.py +47 -0
  46. bibexpy/_server/services/bibtex_writer.py +104 -0
  47. bibexpy/_server/services/converter.py +205 -0
  48. bibexpy/_server/services/disambiguation/__init__.py +19 -0
  49. bibexpy/_server/services/disambiguation/blocking.py +581 -0
  50. bibexpy/_server/services/disambiguation/cache.py +47 -0
  51. bibexpy/_server/services/disambiguation/deepseek_client.py +203 -0
  52. bibexpy/_server/services/disambiguation/orcid.py +261 -0
  53. bibexpy/_server/services/disambiguation/pipeline.py +985 -0
  54. bibexpy/_server/services/disambiguation/similarity.py +91 -0
  55. bibexpy/_server/services/enricher.py +338 -0
  56. bibexpy/_server/services/exporter.py +112 -0
  57. bibexpy/_server/services/filter_engine.py +300 -0
  58. bibexpy/_server/services/merger.py +202 -0
  59. bibexpy/_server/services/methodology.py +102 -0
  60. bibexpy/_server/services/report_export.py +300 -0
  61. bibexpy/_server/services/ris_writer.py +62 -0
  62. bibexpy/_server/services/smart_merger.py +967 -0
  63. bibexpy/_server/services/storage.py +165 -0
  64. bibexpy/_web/404/index.html +1 -0
  65. bibexpy/_web/404.html +1 -0
  66. bibexpy/_web/_next/static/chunks/117-7ad5186126fa076d.js +2 -0
  67. bibexpy/_web/_next/static/chunks/156-75beffb8ae92a7f3.js +1 -0
  68. bibexpy/_web/_next/static/chunks/169-301c04fcec22686f.js +4 -0
  69. bibexpy/_web/_next/static/chunks/2-ecc1c36a5632ac61.js +1 -0
  70. bibexpy/_web/_next/static/chunks/244-be343e0f8aa00fb5.js +1 -0
  71. bibexpy/_web/_next/static/chunks/367-b7457c2b95f6932b.js +1 -0
  72. bibexpy/_web/_next/static/chunks/382-9cd163eed632e241.js +1 -0
  73. bibexpy/_web/_next/static/chunks/392-afa8bfa4c1a9893d.js +1 -0
  74. bibexpy/_web/_next/static/chunks/507-63607ded9f83c1aa.js +1 -0
  75. bibexpy/_web/_next/static/chunks/624-cae565632f47217d.js +1 -0
  76. bibexpy/_web/_next/static/chunks/739-a00c6b9c0f11813e.js +1 -0
  77. bibexpy/_web/_next/static/chunks/862-8e1bd5f93c082c02.js +1 -0
  78. bibexpy/_web/_next/static/chunks/app/_not-found/page-873ba59b5eb7c342.js +1 -0
  79. bibexpy/_web/_next/static/chunks/app/layout-0d5fc68ac8971a04.js +1 -0
  80. bibexpy/_web/_next/static/chunks/app/page-cf2bea5edc74459a.js +1 -0
  81. bibexpy/_web/_next/static/chunks/app/projects/[id]/convert/page-ab6dd645ae113b64.js +1 -0
  82. bibexpy/_web/_next/static/chunks/app/projects/[id]/disambiguate/page-dd98482cc47344e9.js +1 -0
  83. bibexpy/_web/_next/static/chunks/app/projects/[id]/enrich/page-4727e431468514e9.js +1 -0
  84. bibexpy/_web/_next/static/chunks/app/projects/[id]/export/page-f9005d164bb22cb0.js +1 -0
  85. bibexpy/_web/_next/static/chunks/app/projects/[id]/layout-07755fda55b3ae1f.js +1 -0
  86. bibexpy/_web/_next/static/chunks/app/projects/[id]/merge/page-45b95318ea7beccf.js +1 -0
  87. bibexpy/_web/_next/static/chunks/app/projects/[id]/records/page-bfad80457da9eb0b.js +1 -0
  88. bibexpy/_web/_next/static/chunks/app/projects/[id]/report/page-f05767e74158e995.js +1 -0
  89. bibexpy/_web/_next/static/chunks/app/projects/[id]/upload/page-8df78ca9cdecbcb8.js +1 -0
  90. bibexpy/_web/_next/static/chunks/app/projects/page-99960711ac6a13e9.js +1 -0
  91. bibexpy/_web/_next/static/chunks/app/settings/page-002df809d6c5a227.js +1 -0
  92. bibexpy/_web/_next/static/chunks/app/tools/page-27eee1c6a590859f.js +1 -0
  93. bibexpy/_web/_next/static/chunks/fd9d1056-f2718be92181f426.js +1 -0
  94. bibexpy/_web/_next/static/chunks/framework-f66176bb897dc684.js +1 -0
  95. bibexpy/_web/_next/static/chunks/main-app-d138a6e2f8c847f6.js +1 -0
  96. bibexpy/_web/_next/static/chunks/main-c4b9ddbf514503ef.js +1 -0
  97. bibexpy/_web/_next/static/chunks/pages/_app-72b849fbd24ac258.js +1 -0
  98. bibexpy/_web/_next/static/chunks/pages/_error-7ba65e1336b92748.js +1 -0
  99. bibexpy/_web/_next/static/chunks/polyfills-42372ed130431b0a.js +1 -0
  100. bibexpy/_web/_next/static/chunks/webpack-c81f7fd28659d64f.js +1 -0
  101. bibexpy/_web/_next/static/css/1c4638f3e39cf127.css +3 -0
  102. bibexpy/_web/_next/static/ypx2IQAkZiSaFiKWnzZGB/_buildManifest.js +1 -0
  103. bibexpy/_web/_next/static/ypx2IQAkZiSaFiKWnzZGB/_ssgManifest.js +1 -0
  104. bibexpy/_web/images/PROMPTS.md +83 -0
  105. bibexpy/_web/images/about-illustration.png +0 -0
  106. bibexpy/_web/images/authors/alperen-sahin.jpg +0 -0
  107. bibexpy/_web/images/authors/burak-can-kara.jpg +0 -0
  108. bibexpy/_web/images/authors/taskin-dirsehan.jpg +0 -0
  109. bibexpy/_web/images/bibexpy-logo-full.png +0 -0
  110. bibexpy/_web/images/bibexpy-logo-header.png +0 -0
  111. bibexpy/_web/images/bibexpy-logo-in.png +0 -0
  112. bibexpy/_web/images/bibexpy-logo.webp +0 -0
  113. bibexpy/_web/images/hero-illustration.png +0 -0
  114. bibexpy/_web/images/loader.gif +0 -0
  115. bibexpy/_web/images/workflow-diagram.png +0 -0
  116. bibexpy/_web/index.html +1 -0
  117. bibexpy/_web/index.txt +11 -0
  118. bibexpy/_web/projects/_/convert/index.html +1 -0
  119. bibexpy/_web/projects/_/convert/index.txt +12 -0
  120. bibexpy/_web/projects/_/disambiguate/index.html +1 -0
  121. bibexpy/_web/projects/_/disambiguate/index.txt +12 -0
  122. bibexpy/_web/projects/_/enrich/index.html +1 -0
  123. bibexpy/_web/projects/_/enrich/index.txt +12 -0
  124. bibexpy/_web/projects/_/export/index.html +1 -0
  125. bibexpy/_web/projects/_/export/index.txt +12 -0
  126. bibexpy/_web/projects/_/merge/index.html +1 -0
  127. bibexpy/_web/projects/_/merge/index.txt +12 -0
  128. bibexpy/_web/projects/_/records/index.html +1 -0
  129. bibexpy/_web/projects/_/records/index.txt +12 -0
  130. bibexpy/_web/projects/_/report/index.html +1 -0
  131. bibexpy/_web/projects/_/report/index.txt +12 -0
  132. bibexpy/_web/projects/_/upload/index.html +1 -0
  133. bibexpy/_web/projects/_/upload/index.txt +12 -0
  134. bibexpy/_web/projects/index.html +1 -0
  135. bibexpy/_web/projects/index.txt +11 -0
  136. bibexpy/_web/settings/index.html +1 -0
  137. bibexpy/_web/settings/index.txt +11 -0
  138. bibexpy/_web/tools/README.md +65 -0
  139. bibexpy/_web/tools/bibexcel.svg +6 -0
  140. bibexpy/_web/tools/bibliometrix.png +0 -0
  141. bibexpy/_web/tools/biblioshiny.svg +12 -0
  142. bibexpy/_web/tools/citavi.svg +6 -0
  143. bibexpy/_web/tools/citespace.svg +7 -0
  144. bibexpy/_web/tools/citnetexplorer.svg +8 -0
  145. bibexpy/_web/tools/endnote.svg +6 -0
  146. bibexpy/_web/tools/excel.svg +1 -0
  147. bibexpy/_web/tools/gephi.svg +66 -0
  148. bibexpy/_web/tools/histcite.svg +7 -0
  149. bibexpy/_web/tools/index.html +1 -0
  150. bibexpy/_web/tools/index.txt +11 -0
  151. bibexpy/_web/tools/jabref.svg +122 -0
  152. bibexpy/_web/tools/latex.svg +1 -0
  153. bibexpy/_web/tools/mendeley.svg +1 -0
  154. bibexpy/_web/tools/openrefine.svg +15 -0
  155. bibexpy/_web/tools/overleaf.svg +1 -0
  156. bibexpy/_web/tools/papers.svg +7 -0
  157. bibexpy/_web/tools/powerbi.svg +1 -0
  158. bibexpy/_web/tools/python.svg +1 -0
  159. bibexpy/_web/tools/r.svg +1 -0
  160. bibexpy/_web/tools/refworks.svg +5 -0
  161. bibexpy/_web/tools/scite.svg +5 -0
  162. bibexpy/_web/tools/tableau.svg +1 -0
  163. bibexpy/_web/tools/vosviewer.png +0 -0
  164. bibexpy/_web/tools/zotero.svg +1 -0
  165. bibexpy/cli.py +242 -0
  166. bibexpy-2.0.0.dist-info/METADATA +105 -0
  167. bibexpy-2.0.0.dist-info/RECORD +171 -0
  168. bibexpy-2.0.0.dist-info/WHEEL +5 -0
  169. bibexpy-2.0.0.dist-info/entry_points.txt +2 -0
  170. bibexpy-2.0.0.dist-info/licenses/LICENSE +674 -0
  171. bibexpy-2.0.0.dist-info/top_level.txt +2 -0
bibex_core/__init__.py ADDED
@@ -0,0 +1,13 @@
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+ """bibex_core — Çekirdek bibliometrik veri işleme modülleri.
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+
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+ Bu paket, orijinal BibexPy/Main klasöründeki modüllerin web v2 için yeniden
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+ ambalajlanmış halidir. Fonksiyon imzaları korunur; sadece import yolları
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+ düzeltilir.
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+ """
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+
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+ from . import scp2xlsx
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+ from . import wos2xlsx
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+ from . import xlsx2vos
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+ from . import MergeDB
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+
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+ __all__ = ["scp2xlsx", "wos2xlsx", "xlsx2vos", "MergeDB"]
@@ -0,0 +1,35 @@
1
+ from .api_utils import (
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+ extract_metadata,
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+ extract_metadata_from_scopus,
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+ extract_metadata_from_openalex,
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+ extract_metadata_from_crossref
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+ )
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+
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+ from .file_utils import (
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+ ensure_dir,
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+ find_files,
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+ find_data_folders,
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+ save_statistics,
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+ save_comprehensive_statistics
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+ )
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+
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+ from .stats_utils import (
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+ generate_detailed_statistics,
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+ generate_metadata_statistics,
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+ generate_metadata_comparison,
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+ compare_merge_methods
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+ )
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+
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+ from .post_process import (
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+ copy_cr_raw_to_cr,
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+ process_merged_files
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+ )
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+
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+ __all__ = [
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+ 'extract_metadata',
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+ 'extract_metadata_from_scopus',
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+ 'extract_metadata_from_openalex',
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+ 'extract_metadata_from_crossref',
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+ 'copy_cr_raw_to_cr',
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+ 'process_merged_files'
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+ ]