AutoStatLib 0.2.20__py3-none-any.whl → 0.2.21__py3-none-any.whl

AutoStatLib/AutoStatLib.py

@@ -30,8 +30,7 @@ class StatisticalAnalysis(StatisticalTests, NormalityTests, TextFormatting, Help
         self.verbose = verbose
         self.n_groups = len(self.groups_list)
         self.groups_name = [groups_name[i % len(groups_name)]
-                             for i in range(self.n_groups)] if groups_name else [f'Group {i+1}'
-                                                                                       for i in range(self.n_groups)]
+                             for i in range(self.n_groups)] if groups_name and groups_name != [''] else [f'Group {i+1}' for i in range(self.n_groups)]
 
         self.warning_flag_non_numeric_data = False
         self.summary = 'AutoStatLib v{}'.format(__version__)

AutoStatLib/StatPlots.py

@@ -168,9 +168,9 @@ class BaseStatPlot(Helpers):
                        linewidth=2,
                        widths=0.85,
                        vert=True,
-                       showmeans=True,
-                       showmedians=True,
-                       showextrema=True,
+                       showmeans=False,
+                       showmedians=False,
+                       showextrema=False,
                        points=200,
                        bw_method=0.5):
 
@@ -413,7 +413,7 @@ class BaseStatPlot(Helpers):
                         zorder=zorder - 1)
 
     def add_errorbar_sd(self, ax, x,
-                        capsize=8,
+                        capsize=4,
                         ecolor='r',
                         linewidth=2,
                         zorder=3):
@@ -424,10 +424,12 @@ class BaseStatPlot(Helpers):
                     capsize=capsize*self.figure_scale_factor,
                     ecolor=ecolor,
                     linewidth=linewidth*self.figure_scale_factor,
+                    elinewidth=linewidth*self.figure_scale_factor,
+                    capthick=linewidth*self.figure_scale_factor,
                     zorder=zorder)
 
     def add_errorbar_sem(self, ax, x,
-                         capsize=8,
+                         capsize=4,
                          ecolor='r',
                          linewidth=2,
                          zorder=3):
@@ -439,35 +441,40 @@ class BaseStatPlot(Helpers):
                     ecolor=ecolor,
                     linewidth=linewidth*self.figure_scale_factor,
                     elinewidth=linewidth*self.figure_scale_factor,
+                    capthick=linewidth*self.figure_scale_factor,
                     zorder=zorder)
 
     def add_mean_marker(self, ax, x,
                         marker='_',
                         markerfacecolor='#00000000',
                         markeredgecolor='r',
-                        markersize=16,
-                        markeredgewidth=1):
+                        markersize=20,
+                        linewidth=2,
+                        zorder=3):
         # Overlay mean marker
         ax.plot(x, self.mean[x],
                 marker=marker,
                 markerfacecolor=markerfacecolor,
                 markeredgecolor=markeredgecolor,
                 markersize=markersize*self.figure_scale_factor,
-                markeredgewidth=markeredgewidth*self.figure_scale_factor)
+                markeredgewidth=linewidth*self.figure_scale_factor,
+                zorder=zorder)
 
     def add_median_marker(self, ax, x,
-                          marker='x',
-                          markerfacecolor='#00000000',
+                          marker='o',
+                          markerfacecolor="#FFFFFFFF",
                           markeredgecolor='r',
-                          markersize=10,
-                          markeredgewidth=1):
+                          markersize=6,
+                          linewidth=2,
+                          zorder=4):
         # Overlay median marker
         ax.plot(x, self.median[x],
                 marker=marker,
                 markerfacecolor=markerfacecolor,
                 markeredgecolor=markeredgecolor,
                 markersize=markersize*self.figure_scale_factor,
-                markeredgewidth=markeredgewidth*self.figure_scale_factor)
+                markeredgewidth=linewidth*self.figure_scale_factor,
+                zorder=zorder)
 
     def add_significance_bars(self, ax,
                               linewidth=2,
@@ -628,19 +635,18 @@ class BaseStatPlot(Helpers):
 
 class BarStatPlot(BaseStatPlot):
 
-    def plot(self):
+    def plot(self, linewidth=1.8):
         fig, ax = self.setup_figure()
-        linewidth = 2
-
+        
         for x in range(len(self.data_groups)):
 
             # Create a bar for given group.
-            self.add_barplot(ax, x)
+            self.add_barplot(ax, x, linewidth=linewidth)
 
             # Overlay errbars, and markers.
-            self.add_median_marker(ax, x)
-            self.add_mean_marker(ax, x)
-            self.add_errorbar_sd(ax, x)
+            self.add_median_marker(ax, x, linewidth=linewidth)
+            self.add_mean_marker(ax, x, linewidth=linewidth)
+            self.add_errorbar_sd(ax, x, linewidth=linewidth)
 
         self.add_swarm(ax)
         self.add_significance_bars(ax, linewidth)
@@ -661,9 +667,8 @@ class ViolinStatPlot(BaseStatPlot):
         https://seaborn.pydata.org/archive/0.11/generated/seaborn.violinplot.html
     '''
 
-    def plot(self):
+    def plot(self, linewidth=1.8):
         fig, ax = self.setup_figure()
-        linewidth = 2
 
         for x in range(len(self.data_groups)):
 
@@ -671,9 +676,9 @@ class ViolinStatPlot(BaseStatPlot):
             self.add_violinplot(ax, x)
 
             # Overlay errbars and markers.
-            self.add_median_marker(ax, x)
-            self.add_mean_marker(ax, x)
-            # self.add_errorbar_sd(ax, x)
+            self.add_median_marker(ax, x, linewidth=linewidth)
+            self.add_mean_marker(ax, x, linewidth=linewidth)
+            self.add_errorbar_sd(ax, x, linewidth=linewidth)
 
         self.add_swarm(ax)
         self.add_significance_bars(ax, linewidth)
@@ -686,9 +691,8 @@ class ViolinStatPlot(BaseStatPlot):
 
 class BoxStatPlot(BaseStatPlot):
 
-    def plot(self):
+    def plot(self, linewidth=1.8):
         fig, ax = self.setup_figure()
-        linewidth = 2
 
         self.add_boxplot(ax)
         self.add_swarm(ax)
@@ -699,16 +703,15 @@ class BoxStatPlot(BaseStatPlot):
 
 class ScatterStatPlot(BaseStatPlot):
 
-    def plot(self):
+    def plot(self, linewidth=1.8):
         fig, ax = self.setup_figure()
-        linewidth = 2
 
         for x in range(len(self.data_groups)):
 
             # Overlay errbars, and markers.
-            self.add_median_marker(ax, x)
-            self.add_mean_marker(ax, x)
-            self.add_errorbar_sd(ax, x)
+            self.add_median_marker(ax, x, linewidth=linewidth)
+            self.add_mean_marker(ax, x, linewidth=linewidth)
+            self.add_errorbar_sd(ax, x, linewidth=linewidth)
 
         self.add_scatter(ax)
         self.add_significance_bars(ax, linewidth)
@@ -721,16 +724,15 @@ class ScatterStatPlot(BaseStatPlot):
 
 class SwarmStatPlot(BaseStatPlot):
 
-    def plot(self):
+    def plot(self, linewidth=1.8):
         fig, ax = self.setup_figure()
-        linewidth = 2
 
         for x in range(len(self.data_groups)):
 
             # Overlay errbars, and markers.
-            self.add_median_marker(ax, x)
-            self.add_mean_marker(ax, x)
-            self.add_errorbar_sd(ax, x)
+            self.add_median_marker(ax, x, linewidth=linewidth)
+            self.add_mean_marker(ax, x, linewidth=linewidth)
+            self.add_errorbar_sd(ax, x, linewidth=linewidth)
 
         self.add_swarm(ax)
         self.add_significance_bars(ax, linewidth)

AutoStatLib/_version.py

@@ -1,2 +1,2 @@
 # AutoStatLib package version:
-__version__ = "0.2.20"
+__version__ = "0.2.21"

AutoStatLib/text_formatting.py

@@ -92,7 +92,7 @@ class TextFormatting():
         if p is not None:
             if p < 0.0001:
                 return 4
-            if p < 0.001:
+            elif p < 0.001:
                 return 3
             elif p < 0.01:
                 return 2

{autostatlib-0.2.20.dist-info → autostatlib-0.2.21.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: AutoStatLib
-Version: 0.2.20
+Version: 0.2.21
 Summary: AutoStatLib - a simple statistical analysis tool
 Author: Stemonitis, SciWare LLC
 Author-email: konung-yaropolk <yaropolk1995@gmail.com>

autostatlib-0.2.21.dist-info/RECORD

@@ -0,0 +1,14 @@
+AutoStatLib/AutoStatLib.py,sha256=nJNBdw9pL5hKDpbuG6f5LvjjqUdm5KUcZ6VukFjYa8c,10423
+AutoStatLib/StatPlots.py,sha256=UzeScZyGeSq3Pxsxh0JkbAaM_pKBtOMcX76R9sRf4Wk,29161
+AutoStatLib/__init__.py,sha256=r7VdcL7F4UCRxEFh8WFBd9y61KavX_qt7fFbKjtjfjo,137
+AutoStatLib/__main__.py,sha256=0OIv5sqFNI-diyHFtYL6HPcYrOWdLiqYYOO_nxrHuTk,283
+AutoStatLib/_version.py,sha256=Kk1FtClQ_RuIovxiSUaax8UPfVvqGQGiZXeTkYxF94M,54
+AutoStatLib/helpers.py,sha256=UqIKVQXA6l2pffX6hVOzc_7VYbNxP5IwRE0uZbtvsBI,4006
+AutoStatLib/normality_tests.py,sha256=TYeKpfpJRzOHvDZucObuZhPktjiZpSZwh381eJ8ENC4,2381
+AutoStatLib/statistical_tests.py,sha256=9fqd9_1mvm9snLrrNq9Summ-olrPgA2F8siOy7a12Y4,7290
+AutoStatLib/text_formatting.py,sha256=Nb3sz33jVsmqXYaamnEOXY_SaxoqpQChc9KgoK5i1NE,3551
+autostatlib-0.2.21.dist-info/licenses/LICENSE,sha256=IMF9i4xIpgCADf0U-V1cuf9HBmqWQd3qtI3FSuyW4zE,26526
+autostatlib-0.2.21.dist-info/METADATA,sha256=c3pont51YFC4EXzPyyL9iRlIKRWxEGMa_1L2UsJ5CP8,36979
+autostatlib-0.2.21.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+autostatlib-0.2.21.dist-info/top_level.txt,sha256=BuHzVyE2andc7RwD_UPmDjLl9CUAyBH6WHZGjaIReUI,12
+autostatlib-0.2.21.dist-info/RECORD,,

autostatlib-0.2.20.dist-info/RECORD

@@ -1,14 +0,0 @@
-AutoStatLib/AutoStatLib.py,sha256=sFxGlWjXI5_qnJTFU6weaP2Uo2f755rPVsqSTyUnyXA,10486
-AutoStatLib/StatPlots.py,sha256=1kDy_FePmd9xOUfXDPE80ew7AY6EksqkJPjSORHz7Ls,28610
-AutoStatLib/__init__.py,sha256=r7VdcL7F4UCRxEFh8WFBd9y61KavX_qt7fFbKjtjfjo,137
-AutoStatLib/__main__.py,sha256=0OIv5sqFNI-diyHFtYL6HPcYrOWdLiqYYOO_nxrHuTk,283
-AutoStatLib/_version.py,sha256=gZe9zMvM0WabwWI4ZRzAVe07HF8Xqk1RX1TKeHoNLyU,54
-AutoStatLib/helpers.py,sha256=UqIKVQXA6l2pffX6hVOzc_7VYbNxP5IwRE0uZbtvsBI,4006
-AutoStatLib/normality_tests.py,sha256=TYeKpfpJRzOHvDZucObuZhPktjiZpSZwh381eJ8ENC4,2381
-AutoStatLib/statistical_tests.py,sha256=9fqd9_1mvm9snLrrNq9Summ-olrPgA2F8siOy7a12Y4,7290
-AutoStatLib/text_formatting.py,sha256=DyQnS3wCrmiPfCQhMcafAnfJIo433jmiOAB68CUVf8o,3549
-autostatlib-0.2.20.dist-info/licenses/LICENSE,sha256=IMF9i4xIpgCADf0U-V1cuf9HBmqWQd3qtI3FSuyW4zE,26526
-autostatlib-0.2.20.dist-info/METADATA,sha256=UUewtPqPTdYQgIzlJxib88k1j1SSdeAdQJFoMEfyHqk,36979
-autostatlib-0.2.20.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-autostatlib-0.2.20.dist-info/top_level.txt,sha256=BuHzVyE2andc7RwD_UPmDjLl9CUAyBH6WHZGjaIReUI,12
-autostatlib-0.2.20.dist-info/RECORD,,