AMR 2.1.1.9215__py3-none-any.whl → 2.1.1.9217__py3-none-any.whl

AMR/datasets.py

@@ -39,7 +39,10 @@ except metadata.PackageNotFoundError:
     python_amr_version = ''
 
 # R package version of AMR
-r_amr_version = robjects.r(f'as.character(packageVersion("AMR", lib.loc = "{r_lib_path}"))')[0]
+r_amr_version = robjects.r(f'as.character(packageVersion("AMR", lib.loc = "{r_amr_lib_path}"))')
+
+print(python_amr_version)
+print(r_amr_version)
 
 # Compare R and Python package versions
 if r_amr_version != python_amr_version:

{amr-2.1.1.9215.dist-info → amr-2.1.1.9217.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: AMR
-Version: 2.1.1.9215
+Version: 2.1.1.9217
 Summary: A Python wrapper for the AMR R package
 Home-page: https://github.com/msberends/AMR
 Author: Matthijs Berends
@@ -27,11 +27,25 @@ Dynamic: requires-python
 Dynamic: summary
 
 
-The `AMR` package for R is a powerful tool for antimicrobial resistance (AMR) analysis. It provides extensive features for handling microbial and antimicrobial data. However, for those who work primarily in Python, we now have a more intuitive option available: the [`AMR` Python Package Index](https://pypi.org/project/AMR/).
+The `AMR` package for R is a powerful tool for antimicrobial resistance (AMR) analysis. It provides extensive features for handling microbial and antimicrobial data. However, for those who work primarily in Python, we now have a more intuitive option available: the [`AMR` Python package](https://pypi.org/project/AMR/).
 
-This Python package is a wrapper round the `AMR` R package. It uses the `rpy2` package internally. Despite the need to have R installed, Python users can now easily work with AMR data directly through Python code.
+This Python package is a wrapper around the `AMR` R package. It uses the `rpy2` package internally. Despite the need to have R installed, Python users can now easily work with AMR data directly through Python code.
 
-# Install
+# Prerequisites
+
+This package was only tested with a [virtual environment (venv)](https://docs.python.org/3/library/venv.html). You can set up such an environment by running:
+
+```python
+# linux and macOS:
+python -m venv /path/to/new/virtual/environment
+
+# Windows:
+python -m venv C:\path\to\new\virtual\environment
+```
+
+Then you can [activate the environment](https://docs.python.org/3/library/venv.html#how-venvs-work), after which the venv is ready to work with.
+
+# Install AMR
 
 1. Since the Python package is available on the official [Python Package Index](https://pypi.org/project/AMR/), you can just run:
 

amr-2.1.1.9217.dist-info/RECORD

@@ -0,0 +1,7 @@
+AMR/__init__.py,sha256=CqpcLv7M6mte09zdHYPzBuHJQeFAqJ4s2uN_rExYfoM,7730
+AMR/datasets.py,sha256=Fc9Ogxehhthw2T7qVc758zWdYkkztDYyWH4RRMwekcI,2667
+AMR/functions.py,sha256=91Tl9Jh6sbu-1xUvlst9VyQB5HJOe6ZCNhjtPpnLuik,46722
+amr-2.1.1.9217.dist-info/METADATA,sha256=64FVyOEFl6EKExaSln9mBpLYxv7h6uniz0IbYcophPg,10095
+amr-2.1.1.9217.dist-info/WHEEL,sha256=beeZ86-EfXScwlR_HKu4SllMC9wUEj_8Z_4FJ3egI2w,91
+amr-2.1.1.9217.dist-info/top_level.txt,sha256=7K6Mq_X_OHdXOzQM5y06VUadXjYkze6yzufL1d7_6xc,4
+amr-2.1.1.9217.dist-info/RECORD,,

{amr-2.1.1.9215.dist-info → amr-2.1.1.9217.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (76.0.0)
+Generator: setuptools (76.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

amr-2.1.1.9215.dist-info/RECORD

@@ -1,7 +0,0 @@
-AMR/__init__.py,sha256=CqpcLv7M6mte09zdHYPzBuHJQeFAqJ4s2uN_rExYfoM,7730
-AMR/datasets.py,sha256=KCofsafX_KV40DRUsKXefedJ1hErDnoGhFRXZcW-tSY,2618
-AMR/functions.py,sha256=91Tl9Jh6sbu-1xUvlst9VyQB5HJOe6ZCNhjtPpnLuik,46722
-amr-2.1.1.9215.dist-info/METADATA,sha256=3bhg93ipTx_0X1RsrA-jb9VfCoB1lZ7tAxEqQeay46E,9630
-amr-2.1.1.9215.dist-info/WHEEL,sha256=52BFRY2Up02UkjOa29eZOS2VxUrpPORXg1pkohGGUS8,91
-amr-2.1.1.9215.dist-info/top_level.txt,sha256=7K6Mq_X_OHdXOzQM5y06VUadXjYkze6yzufL1d7_6xc,4
-amr-2.1.1.9215.dist-info/RECORD,,