wiki-graph-core 0.4.0 → 0.4.1

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Files changed (30) hide show
  1. package/data/help/commands/library-predicate.jinja +2 -2
  2. package/data/help/commands/library.jinja +12 -10
  3. package/data/help/commands/predicate.jinja +1 -1
  4. package/data/help/topics/library.jinja +8 -5
  5. package/data/help/topics/uri.jinja +2 -0
  6. package/dist/gc.cjs.map +1 -1
  7. package/dist/index.cjs +114 -39
  8. package/dist/index.cjs.map +1 -1
  9. package/dist/index.d.cts +9 -2
  10. package/dist/index.d.ts +1 -1
  11. package/dist/index.js +4 -0
  12. package/dist/index.js.map +1 -1
  13. package/dist/library/index.d.ts +2 -2
  14. package/dist/library/membership.js +18 -5
  15. package/dist/library/membership.js.map +1 -1
  16. package/dist/library/query.d.ts +4 -2
  17. package/dist/library/query.js +44 -0
  18. package/dist/library/query.js.map +1 -1
  19. package/dist/library/registry.d.ts +2 -1
  20. package/dist/library/registry.js +10 -0
  21. package/dist/library/registry.js.map +1 -1
  22. package/dist/maintenance/upgrade.js +15 -19
  23. package/dist/maintenance/upgrade.js.map +1 -1
  24. package/dist/retrieval/query/archive-view/helper/sort.js +1 -1
  25. package/dist/retrieval/query/archive-view/helper/sort.js.map +1 -1
  26. package/dist/storage/schema-upgrade/index.d.ts +7 -2
  27. package/dist/storage/schema-upgrade/index.js +26 -14
  28. package/dist/storage/schema-upgrade/index.js.map +1 -1
  29. package/dist/worker.cjs.map +1 -1
  30. package/package.json +1 -1
package/dist/storage/schema-upgrade/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"sources":["../../../src/storage/schema-upgrade/index.ts"],"sourcesContent":["import { randomUUID } from \"crypto\";\nimport { mkdtemp, rename, rm, stat, writeFile } from \"fs/promises\";\nimport { tmpdir } from \"os\";\nimport { dirname, join, resolve } from \"path\";\n\nimport { Database } from \"../../document/database.js\";\nimport { ensureChapterKeys } from \"../../document/chapter/toc.js\";\nimport type { MutableTocFile } from \"../../document/chapter/tree.js\";\nimport { ensureWikiGraphHomeSchemaCurrent } from \"../../document/home-schema-upgrade.js\";\nimport {\n resolveWikiGraphHomeDirectoryPath,\n resolveWikiGraphStagingDirectoryPath,\n} from \"../../runtime/common/wiki-graph/dir.js\";\nimport {\n SEARCH_INDEX_DATABASE_PATH,\n WIKG_MANIFEST_PATH,\n} from \"../wikg/archive/constants.js\";\nimport { parseWikgManifest } from \"../wikg/archive/manifest.js\";\nimport { normalizeArchivePath } from \"../wikg/archive/paths.js\";\nimport {\n openIndexedArchive,\n readArchiveEntryText,\n} from \"../wikg/archive/zip.js\";\nimport { writeWikgArchiveWithOverlays } from \"../wikg/archive/write.js\";\nimport { createArchiveKey } from \"../wikg/wikg-coordinator/archive-key.js\";\nimport { tocFileSchema, type TocFile } from \"../../text/source/toc.js\";\n\nexport {\n ensureWikiGraphHomeSchemaCurrent,\n readWikiGraphHomeSchemaVersion,\n} from \"../../document/home-schema-upgrade.js\";\n\nexport const CURRENT_ARCHIVE_SCHEMA_VERSION = 2;\nconst LOCK_STALE_TIMEOUT_MS = 5 * 60 * 1000;\n\nexport async function ensureWikiGraphArchiveSchemaCurrent(\n archivePath: string,\n): Promise<void> {\n const schemaVersion = await readWikiGraphArchiveSchemaVersion(archivePath);\n\n if (schemaVersion > CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `Unsupported Wiki Graph archive schema version: ${schemaVersion}.`,\n );\n }\n if (schemaVersion < CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `This Wiki Graph archive uses schema v${schemaVersion} and must be upgraded before use.\\nRun: wg maintenance upgrade ${archivePath}`,\n );\n }\n}\n\nexport async function readWikiGraphArchiveSchemaVersion(\n archivePath: string,\n): Promise<number> {\n const { entries, zipFile } = await openIndexedArchive(resolve(archivePath));\n\n try {\n const manifestEntry = entries.find(\n (entry) => normalizeArchivePath(entry.fileName) === WIKG_MANIFEST_PATH,\n );\n\n if (manifestEntry === undefined) {\n throw new Error(`Missing WIKG manifest: ${WIKG_MANIFEST_PATH}.`);\n }\n\n return parseWikgManifest(\n await readArchiveEntryText(resolve(archivePath), manifestEntry),\n ).schemaVersion;\n } finally {\n zipFile.close();\n }\n}\n\nexport async function upgradeWikiGraphArchiveSchema(\n archivePath: string,\n): Promise<void> {\n const resolvedArchivePath = resolve(archivePath);\n const schemaVersion =\n await readWikiGraphArchiveSchemaVersion(resolvedArchivePath);\n\n if (schemaVersion === CURRENT_ARCHIVE_SCHEMA_VERSION) {\n return;\n }\n\n if (schemaVersion > CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `Unsupported Wiki Graph archive schema version: ${schemaVersion}.`,\n );\n }\n\n await ensureWikiGraphHomeSchemaCurrent();\n\n const archiveKey = createArchiveKey(resolvedArchivePath);\n await assertArchiveUpgradeSafe(archiveKey);\n\n const temporaryPath = join(\n dirname(resolvedArchivePath),\n `.${getArchiveBasename(resolvedArchivePath)}.${process.pid}.${randomUUID()}.upgrade.tmp`,\n );\n const temporaryDirectories: string[] = [];\n\n try {\n const tocOverlay = await createChapterTocUpgradeOverlay(\n resolvedArchivePath,\n temporaryDirectories,\n );\n await writeWikgArchiveWithOverlays(\n resolvedArchivePath,\n temporaryPath,\n [\n {\n entryPath: SEARCH_INDEX_DATABASE_PATH,\n kind: \"deleted\",\n },\n ...(tocOverlay === undefined ? [] : [tocOverlay]),\n ],\n { preserveMutationToken: true },\n );\n await rename(temporaryPath, resolvedArchivePath);\n await cleanupArchiveDerivedData(archiveKey);\n } finally {\n await Promise.all(\n temporaryDirectories.map(async (path) => {\n await deletePathIfExists(path);\n }),\n );\n }\n}\n\nasync function createChapterTocUpgradeOverlay(\n archivePath: string,\n temporaryDirectories: string[],\n): Promise<\n | {\n readonly entryPath: \"toc.json\";\n readonly kind: \"file\";\n readonly workspacePath: string;\n }\n | undefined\n> {\n const { entries, zipFile } = await openIndexedArchive(archivePath);\n\n try {\n const tocEntry = entries.find(\n (entry) => normalizeArchivePath(entry.fileName) === \"toc.json\",\n );\n\n if (tocEntry === undefined) {\n return undefined;\n }\n\n const tocText = await readArchiveEntryText(archivePath, tocEntry);\n let toc: TocFile;\n\n try {\n const parsed = tocFileSchema.safeParse(JSON.parse(tocText));\n if (!parsed.success) {\n return undefined;\n }\n toc = parsed.data;\n } catch {\n return undefined;\n }\n\n const mutableToc = JSON.parse(JSON.stringify(toc)) as MutableTocFile;\n if (!ensureChapterKeys(mutableToc.items)) {\n return undefined;\n }\n\n const temporaryDirectory = await mkdtemp(\n join(tmpdir(), \"wikigraph-toc-upgrade-\"),\n );\n temporaryDirectories.push(temporaryDirectory);\n const workspacePath = join(temporaryDirectory, \"toc.json\");\n await writeFile(\n workspacePath,\n `${JSON.stringify(mutableToc, null, 2)}\\n`,\n \"utf8\",\n );\n\n return {\n entryPath: \"toc.json\",\n kind: \"file\",\n workspacePath,\n };\n } finally {\n zipFile.close();\n }\n}\n\nasync function cleanupArchiveDerivedData(archiveKey: string): Promise<void> {\n const cacheDirectoryPath = join(resolveWikiGraphHomeDirectoryPath(), \"cache\");\n await deletePathIfExists(join(cacheDirectoryPath, \"search-sessions.sqlite\"));\n await deletePathIfExists(\n join(cacheDirectoryPath, \"continuation-cursors.sqlite\"),\n );\n\n const stagingDatabasePath = join(\n resolveWikiGraphStagingDirectoryPath(),\n \"staging.sqlite\",\n );\n if (await pathExists(stagingDatabasePath)) {\n await removeArchiveSearchIndexOverlays(stagingDatabasePath, archiveKey);\n }\n}\n\nasync function assertArchiveUpgradeSafe(archiveKey: string): Promise<void> {\n const stagingDatabasePath = join(\n resolveWikiGraphStagingDirectoryPath(),\n \"staging.sqlite\",\n );\n\n if (!(await pathExists(stagingDatabasePath))) {\n return;\n }\n\n const database = await Database.open(stagingDatabasePath, \"\", {\n readonly: true,\n });\n\n try {\n for (const tableName of [\n \"archive_owners\",\n \"entry_locks\",\n \"entry_sqlite_leases\",\n \"archive_commit_locks\",\n ]) {\n if (!(await tableExists(database, tableName))) {\n continue;\n }\n\n const rows = await database.queryAll(\n `\n SELECT owner_pid, heartbeat_at\n FROM ${tableName}\n WHERE archive_key = ?\n `,\n [archiveKey],\n (row) => ({\n heartbeatAt: Number(row.heartbeat_at),\n ownerPid: Number(row.owner_pid),\n }),\n );\n\n if (rows.some((row) => isActiveLock(row.ownerPid, row.heartbeatAt))) {\n throw new Error(\n `Cannot upgrade archive with active coordinator state: ${archiveKey}.`,\n );\n }\n }\n\n if (await tableExists(database, \"entry_overlays\")) {\n const overlays = await database.queryAll(\n `\n SELECT entry_path\n FROM entry_overlays\n WHERE archive_key = ?\n `,\n [archiveKey],\n (row) => String(row.entry_path),\n );\n\n const problematicOverlay = overlays.find(\n (entryPath) => entryPath !== SEARCH_INDEX_DATABASE_PATH,\n );\n if (problematicOverlay !== undefined) {\n throw new Error(\n `Cannot upgrade archive with non-derived overlay state: ${archiveKey}.`,\n );\n }\n }\n } finally {\n await database.close();\n }\n}\n\nasync function removeArchiveSearchIndexOverlays(\n stagingDatabasePath: string,\n archiveKey?: string,\n): Promise<void> {\n const database = await Database.open(stagingDatabasePath);\n\n try {\n if (!(await tableExists(database, \"entry_overlays\"))) {\n return;\n }\n\n const whereClause =\n archiveKey === undefined\n ? \"WHERE entry_path = ?\"\n : \"WHERE archive_key = ? AND entry_path = ?\";\n const parameters =\n archiveKey === undefined\n ? [SEARCH_INDEX_DATABASE_PATH]\n : [archiveKey, SEARCH_INDEX_DATABASE_PATH];\n const overlays = await database.queryAll(\n `\n SELECT archive_key, workspace_path\n FROM entry_overlays\n ${whereClause}\n `,\n parameters,\n (row) => ({\n archiveKey: String(row.archive_key),\n workspacePath:\n row.workspace_path === null ? undefined : String(row.workspace_path),\n }),\n );\n\n for (const overlay of overlays) {\n if (overlay.workspacePath !== undefined) {\n await deletePathIfExists(overlay.workspacePath);\n }\n }\n\n await database.run(\n `\n DELETE FROM entry_overlays\n ${whereClause}\n `,\n parameters,\n );\n } finally {\n await database.close();\n }\n}\n\nasync function tableExists(\n database: Database,\n tableName: string,\n): Promise<boolean> {\n const row = await database.queryOne(\n `\n SELECT 1 AS present\n FROM sqlite_master\n WHERE type = 'table' AND name = ?\n `,\n [tableName],\n () => true,\n );\n\n return row === true;\n}\n\nfunction isActiveLock(ownerPid: number, heartbeatAt: number): boolean {\n return (\n Date.now() - heartbeatAt <= LOCK_STALE_TIMEOUT_MS &&\n isProcessAlive(ownerPid)\n );\n}\n\nfunction isProcessAlive(pid: number): boolean {\n try {\n process.kill(pid, 0);\n return true;\n } catch {\n return false;\n }\n}\n\nasync function deletePathIfExists(path: string): Promise<void> {\n await rm(path, { force: true, recursive: true });\n}\n\nasync function pathExists(path: string): Promise<boolean> {\n try {\n await stat(path);\n return true;\n } catch {\n return false;\n }\n}\n\nfunction getArchiveBasename(archivePath: string): string {\n return archivePath.split(/[\\\\/]/u).pop() ?? 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+ {"version":3,"sources":["../../../src/storage/schema-upgrade/index.ts"],"sourcesContent":["import { randomUUID } from \"crypto\";\nimport { mkdtemp, rename, rm, stat, writeFile } from \"fs/promises\";\nimport { tmpdir } from \"os\";\nimport { dirname, join, resolve } from \"path\";\n\nimport { Database } from \"../../document/database.js\";\nimport { ensureChapterKeys } from \"../../document/chapter/toc.js\";\nimport type { MutableTocFile } from \"../../document/chapter/tree.js\";\nimport { ensureWikiGraphHomeSchemaCurrent } from \"../../document/home-schema-upgrade.js\";\nimport {\n resolveWikiGraphHomeDirectoryPath,\n resolveWikiGraphStagingDirectoryPath,\n} from \"../../runtime/common/wiki-graph/dir.js\";\nimport {\n SEARCH_INDEX_DATABASE_PATH,\n WIKG_MANIFEST_PATH,\n} from \"../wikg/archive/constants.js\";\nimport { parseWikgManifest } from \"../wikg/archive/manifest.js\";\nimport { normalizeArchivePath } from \"../wikg/archive/paths.js\";\nimport {\n openIndexedArchive,\n readArchiveEntryText,\n} from \"../wikg/archive/zip.js\";\nimport { writeWikgArchiveWithOverlays } from \"../wikg/archive/write.js\";\nimport { createArchiveKey } from \"../wikg/wikg-coordinator/archive-key.js\";\nimport { tocFileSchema, type TocFile } from \"../../text/source/toc.js\";\n\nexport {\n ensureWikiGraphHomeSchemaCurrent,\n readWikiGraphHomeSchemaVersion,\n} from \"../../document/home-schema-upgrade.js\";\n\nexport const CURRENT_ARCHIVE_SCHEMA_VERSION = 2;\nconst LOCK_STALE_TIMEOUT_MS = 5 * 60 * 1000;\n\nexport interface WikiGraphArchiveSchemaUpgradeResult {\n readonly changed: boolean;\n readonly repairedToc: boolean;\n readonly schemaChanged: boolean;\n}\n\nexport async function ensureWikiGraphArchiveSchemaCurrent(\n archivePath: string,\n): Promise<void> {\n const schemaVersion = await readWikiGraphArchiveSchemaVersion(archivePath);\n\n if (schemaVersion > CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `Unsupported Wiki Graph archive schema version: ${schemaVersion}.`,\n );\n }\n if (schemaVersion < CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `This Wiki Graph archive uses schema v${schemaVersion} and must be upgraded before use.\\nRun: wg maintenance upgrade ${archivePath}`,\n );\n }\n}\n\nexport async function readWikiGraphArchiveSchemaVersion(\n archivePath: string,\n): Promise<number> {\n const { entries, zipFile } = await openIndexedArchive(resolve(archivePath));\n\n try {\n const manifestEntry = entries.find(\n (entry) => normalizeArchivePath(entry.fileName) === WIKG_MANIFEST_PATH,\n );\n\n if (manifestEntry === undefined) {\n throw new Error(`Missing WIKG manifest: ${WIKG_MANIFEST_PATH}.`);\n }\n\n return parseWikgManifest(\n await readArchiveEntryText(resolve(archivePath), manifestEntry),\n ).schemaVersion;\n } finally {\n zipFile.close();\n }\n}\n\nexport async function upgradeWikiGraphArchiveSchema(\n archivePath: string,\n): Promise<WikiGraphArchiveSchemaUpgradeResult> {\n const resolvedArchivePath = resolve(archivePath);\n const schemaVersion =\n await readWikiGraphArchiveSchemaVersion(resolvedArchivePath);\n\n if (schemaVersion > CURRENT_ARCHIVE_SCHEMA_VERSION) {\n throw new Error(\n `Unsupported Wiki Graph archive schema version: ${schemaVersion}.`,\n );\n }\n\n const temporaryDirectories: string[] = [];\n\n try {\n const tocOverlay = await createChapterTocUpgradeOverlay(\n resolvedArchivePath,\n temporaryDirectories,\n );\n const schemaChanged = schemaVersion < CURRENT_ARCHIVE_SCHEMA_VERSION;\n\n if (!schemaChanged && tocOverlay === undefined) {\n return {\n changed: false,\n repairedToc: false,\n schemaChanged: false,\n };\n }\n\n await ensureWikiGraphHomeSchemaCurrent();\n\n const archiveKey = createArchiveKey(resolvedArchivePath);\n await assertArchiveUpgradeSafe(archiveKey);\n\n const temporaryPath = join(\n dirname(resolvedArchivePath),\n `.${getArchiveBasename(resolvedArchivePath)}.${process.pid}.${randomUUID()}.upgrade.tmp`,\n );\n\n await writeWikgArchiveWithOverlays(\n resolvedArchivePath,\n temporaryPath,\n [\n ...(schemaChanged\n ? 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[] : [tocOverlay]),\n ],\n { preserveMutationToken: true },\n );\n await rename(temporaryPath, resolvedArchivePath);\n await cleanupArchiveDerivedData(archiveKey);\n\n return {\n changed: true,\n repairedToc: tocOverlay !== undefined,\n schemaChanged,\n };\n } finally {\n await Promise.all(\n temporaryDirectories.map(async (path) => {\n await deletePathIfExists(path);\n }),\n );\n }\n}\n\nasync function createChapterTocUpgradeOverlay(\n archivePath: string,\n temporaryDirectories: string[],\n): Promise<\n | {\n readonly entryPath: \"toc.json\";\n readonly kind: \"file\";\n readonly workspacePath: string;\n }\n | undefined\n> {\n const { entries, zipFile } = await openIndexedArchive(archivePath);\n\n try {\n const tocEntry = entries.find(\n (entry) => normalizeArchivePath(entry.fileName) === \"toc.json\",\n );\n\n if (tocEntry === undefined) {\n return undefined;\n }\n\n const tocText = await readArchiveEntryText(archivePath, tocEntry);\n let toc: TocFile;\n\n try {\n const parsed = tocFileSchema.safeParse(JSON.parse(tocText));\n if (!parsed.success) {\n return undefined;\n }\n toc = parsed.data;\n } catch {\n return undefined;\n }\n\n const mutableToc = JSON.parse(JSON.stringify(toc)) as MutableTocFile;\n if (!ensureChapterKeys(mutableToc.items)) {\n return undefined;\n }\n\n const temporaryDirectory = await mkdtemp(\n join(tmpdir(), \"wikigraph-toc-upgrade-\"),\n );\n temporaryDirectories.push(temporaryDirectory);\n const workspacePath = join(temporaryDirectory, \"toc.json\");\n await writeFile(\n workspacePath,\n `${JSON.stringify(mutableToc, null, 2)}\\n`,\n \"utf8\",\n );\n\n return {\n entryPath: \"toc.json\",\n kind: \"file\",\n workspacePath,\n };\n } finally {\n zipFile.close();\n }\n}\n\nasync function cleanupArchiveDerivedData(archiveKey: string): Promise<void> {\n const cacheDirectoryPath = join(resolveWikiGraphHomeDirectoryPath(), \"cache\");\n await deletePathIfExists(join(cacheDirectoryPath, \"search-sessions.sqlite\"));\n await deletePathIfExists(\n join(cacheDirectoryPath, \"continuation-cursors.sqlite\"),\n );\n\n const stagingDatabasePath = join(\n resolveWikiGraphStagingDirectoryPath(),\n \"staging.sqlite\",\n );\n if (await pathExists(stagingDatabasePath)) {\n await removeArchiveSearchIndexOverlays(stagingDatabasePath, archiveKey);\n }\n}\n\nasync function assertArchiveUpgradeSafe(archiveKey: string): Promise<void> {\n const stagingDatabasePath = join(\n resolveWikiGraphStagingDirectoryPath(),\n \"staging.sqlite\",\n );\n\n if (!(await pathExists(stagingDatabasePath))) {\n return;\n }\n\n const database = await Database.open(stagingDatabasePath, \"\", {\n readonly: true,\n });\n\n try {\n for (const tableName of [\n \"archive_owners\",\n \"entry_locks\",\n \"entry_sqlite_leases\",\n \"archive_commit_locks\",\n ]) {\n if (!(await tableExists(database, tableName))) {\n continue;\n }\n\n const rows = await database.queryAll(\n `\n SELECT owner_pid, heartbeat_at\n FROM ${tableName}\n WHERE archive_key = ?\n `,\n [archiveKey],\n (row) => ({\n heartbeatAt: Number(row.heartbeat_at),\n ownerPid: Number(row.owner_pid),\n }),\n );\n\n if (rows.some((row) => isActiveLock(row.ownerPid, row.heartbeatAt))) {\n throw new Error(\n `Cannot upgrade archive with active coordinator state: ${archiveKey}.`,\n );\n }\n }\n\n if (await tableExists(database, \"entry_overlays\")) {\n const overlays = await database.queryAll(\n `\n SELECT entry_path\n FROM entry_overlays\n WHERE archive_key = ?\n `,\n [archiveKey],\n (row) => String(row.entry_path),\n );\n\n const problematicOverlay = overlays.find(\n (entryPath) => entryPath !== SEARCH_INDEX_DATABASE_PATH,\n );\n if (problematicOverlay !== undefined) {\n throw new Error(\n `Cannot upgrade archive with non-derived overlay state: ${archiveKey}.`,\n );\n }\n }\n } finally {\n await database.close();\n }\n}\n\nasync function removeArchiveSearchIndexOverlays(\n stagingDatabasePath: string,\n archiveKey?: string,\n): Promise<void> {\n const database = await Database.open(stagingDatabasePath);\n\n try {\n if (!(await tableExists(database, \"entry_overlays\"))) {\n return;\n }\n\n const whereClause =\n archiveKey === undefined\n ? \"WHERE entry_path = ?\"\n : \"WHERE archive_key = ? 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