whale-code 6.5.6 → 6.5.7

package/dist/cli/services/tools/agent-tools.js

@@ -9,7 +9,7 @@ import { dirname, join } from "path";
 import { MEMORY_FILE, COMMANDS_DIR } from "../paths.js";
 import { runSubagent, runSubagentBackground } from "../subagent.js";
 import { createTurnContext, getTurnNumber } from "../telemetry.js";
-import { runAgentTeam, runAutoTeam } from "../team-lead.js";
+import { startAgentTeam, getRunningTeam } from "../team-lead.js";
 import { readAgentOutput, stopBackgroundAgent } from "../background-processes.js";
 import { readProcessOutput, killProcess } from "../background-processes.js";
 import { getGlobalEmitter } from "../agent-events.js";
@@ -185,7 +185,7 @@ export function skillTool(input) {
   if (!template) {
     return {
       success: false,
-      output: `Skill not found: ${skillName}. Available locations:\n  .whale/commands/${skillName}.md\n  ~/.whale/commands/${skillName}.md\n\nBuilt-in skills: commit, review, review-pr`
+      output: `Skill not found: ${skillName}. Available locations:\n  .whale/commands/${skillName}.md\n  ~/.whale/commands/${skillName}.md\n\nBuilt-in skills: commit, review, review-pr, verify`
     };
   }
 
@@ -318,6 +318,33 @@ export async function taskOutput(input) {
     output: "task_id is required"
   };
 
+  // Check if it's a running team (team-xxx prefix)
+  if (taskId.startsWith("team-")) {
+    const lead = getRunningTeam(taskId);
+    if (!lead) {
+      taskOutputDedup.delete(taskId);
+      return {
+        success: true,
+        output: `Team ${taskId} completed or not found.`
+      };
+    }
+    const snap = lead.getSnapshot();
+    if (!snap) return {
+      success: false,
+      output: `Team ${taskId} has no state.`
+    };
+
+    // Compact summary — verbose team state handled by TeamPanel in LiveArea
+    const done = snap.progress.completed;
+    const total = snap.progress.total;
+    const elapsed = (snap.elapsedMs / 1000).toFixed(0);
+    const output = `Team "${snap.teamName}" — ${done}/${total} tasks (${snap.progress.percentComplete}%) · ${elapsed}s`;
+    return snap.status === "active" ? dedupTaskOutput(taskId, output) : {
+      success: true,
+      output
+    };
+  }
+
   // Check if it's a background agent (agent-xxx prefix)
   if (taskId.startsWith("agent-")) {
     const agentResult = readAgentOutput(taskId);
@@ -419,6 +446,36 @@ export function taskStop(input) {
     output: "task_id is required"
   };
 
+  // Check if it's a team (team-xxx or team-xxx/teammate-yyy)
+  if (taskId.startsWith("team-")) {
+    const slashIdx = taskId.indexOf("/");
+    const teamId = slashIdx > 0 ? taskId.slice(0, slashIdx) : taskId;
+    const teammateId = slashIdx > 0 ? taskId.slice(slashIdx + 1) : undefined;
+    const lead = getRunningTeam(teamId);
+    if (!lead) return {
+      success: false,
+      output: `Team not found or already completed: ${teamId}`
+    };
+    if (teammateId) {
+      const killed = lead.stopTeammate(teammateId);
+      if (!killed) return {
+        success: false,
+        output: `Teammate not found or already finished: ${teammateId}`
+      };
+      const snap = lead.getSnapshot();
+      const remaining = snap?.teammates.filter(t => t.alive).length ?? 0;
+      return {
+        success: true,
+        output: `Killed teammate ${teammateId}. ${remaining} still running.`
+      };
+    }
+    lead.stop();
+    return {
+      success: true,
+      output: `Team ${teamId} stopped. All teammates killed.`
+    };
+  }
+
   // Check if it's a background agent
   if (taskId.startsWith("agent-")) {
     const result = stopBackgroundAgent(taskId);
@@ -437,7 +494,7 @@ export function taskStop(input) {
 }
 
 // ============================================================================
-// TEAM CREATE
+// TEAM CREATE — non-blocking, returns team_id for polling
 // ============================================================================
 
 export async function teamCreateTool(input, signal) {
@@ -461,8 +518,6 @@ export async function teamCreateTool(input, signal) {
       output: "tasks array is required and must not be empty"
     };
   }
-
-  // Validate task count vs teammate count
   if (tasksInput.length < teammateCount) {
     return {
       success: false,
@@ -476,31 +531,23 @@ export async function teamCreateTool(input, signal) {
     tasks: tasksInput
   };
   try {
-    const result = await runAgentTeam(config, signal);
-
-    // Build summary output
-    const lines = [`## Team: ${name}`, `Status: ${result.success ? "SUCCESS" : "PARTIAL"}`, `Duration: ${(result.durationMs / 1000).toFixed(1)}s`, `Tokens: ${result.tokensUsed.input} in, ${result.tokensUsed.output} out`, "", "### Task Results"];
-    for (const task of result.taskResults) {
-      const icon = task.status === "completed" ? "[done]" : "[fail]";
-      lines.push(`${icon} ${task.description}`);
-      if (task.result) {
-        lines.push(`    ${task.result.slice(0, 200)}${task.result.length > 200 ? "..." : ""}`);
-      }
-    }
+    const {
+      teamId
+    } = await startAgentTeam(config, signal);
     return {
-      success: result.success,
-      output: lines.join("\n")
+      success: true,
+      output: [`## Team Started: ${name}`, `task_id: ${teamId}`, `Teammates: ${teammateCount}`, `Tasks: ${tasksInput.length}`, "", "Team is running in the background.", `Use task_output with task_id="${teamId}" to check progress.`, `Use task_stop with task_id="${teamId}" to kill the team, or task_id="${teamId}/<teammate_id>" to kill a specific teammate.`].join("\n")
     };
   } catch (err) {
     return {
       success: false,
-      output: `Team failed: ${err.message || err}`
+      output: `Team failed to start: ${err.message || err}`
     };
   }
 }
 
 // ============================================================================
-// TEAM AUTO — auto-decompose + parallel execution + review
+// TEAM AUTO — non-blocking auto-decompose + parallel execution
 // ============================================================================
 
 export async function teamAutoTool(input, signal) {
@@ -512,33 +559,53 @@ export async function teamAutoTool(input, signal) {
   const maxTeammates = input.max_teammates || 4;
   const model = input.model || "sonnet";
   const workingDirectory = input.working_directory || process.cwd();
-  const review = input.review !== false;
   try {
-    const result = await runAutoTeam(task, {
-      maxTeammates,
-      model,
-      workingDirectory,
-      review,
-      signal
+    // Decompose is fast (haiku call), do it synchronously
+    const {
+      decomposeTask,
+      sanitizePrompts
+    } = await import("../task-decomposer.js");
+    const decomposition = await decomposeTask(task, {
+      maxCells: maxTeammates,
+      workingDirectory
     });
-    const lines = [`## Auto Team`, `Status: ${result.success ? "SUCCESS" : "PARTIAL"}`, `Duration: ${(result.durationMs / 1000).toFixed(1)}s`, `Tokens: ${result.tokensUsed.input} in, ${result.tokensUsed.output} out`];
-    if (result.warnings?.length) {
-      lines.push("", "### Warnings");
-      for (const w of result.warnings) lines.push(`- ${w}`);
-    }
-    lines.push("", "### Task Results");
-    for (const t of result.taskResults) {
-      const icon = t.status === "completed" ? "[done]" : "[fail]";
-      lines.push(`${icon} ${t.description.slice(0, 120)}`);
-      if (t.result) {
-        lines.push(`    ${t.result.slice(0, 200)}${t.result.length > 200 ? "..." : ""}`);
-      }
+    const warnings = sanitizePrompts(decomposition.sub_tasks);
+
+    // Map sub-tasks to TeamConfig
+    const {
+      readFileSync,
+      statSync
+    } = await import("fs");
+    const {
+      join
+    } = await import("path");
+    const tasks = decomposition.sub_tasks.map(st => {
+      const files = extractFilePaths(st.prompt);
+      return {
+        description: st.prompt,
+        files
+      };
+    });
+    const config = {
+      name: decomposition.summary.slice(0, 60) || "Auto Team",
+      teammateCount: tasks.length,
+      model,
+      tasks
+    };
+    const {
+      teamId
+    } = await startAgentTeam(config, signal);
+    const lines = [`## Auto Team Started`, `team_id: ${teamId}`, `Decomposed into ${tasks.length} sub-tasks:`];
+    for (const t of tasks) {
+      lines.push(`- ${t.description.slice(0, 100)}`);
     }
-    if (result.review) {
-      lines.push("", "### Review", result.review);
+    if (warnings.length > 0) {
+      lines.push("", "### Warnings");
+      for (const w of warnings) lines.push(`- ${w}`);
     }
+    lines.push("", `Team is running in the background. Use task_output with task_id="${teamId}" to check progress.`, `Use task_stop with task_id="${teamId}" to stop, or task_id="${teamId}/<teammate_id>" for individual.`);
     return {
-      success: result.success,
+      success: true,
       output: lines.join("\n")
     };
   } catch (err) {
@@ -548,4 +615,10 @@ export async function teamAutoTool(input, signal) {
     };
   }
 }
+
+/** Extract file paths mentioned in a sub-task prompt. */
+function extractFilePaths(prompt) {
+  const matches = prompt.match(/(?:^|\s)((?:src|lib|app|pages|components|test|spec|public)\/[\w./-]+)/gm);
+  return matches ? [...new Set(matches.map(m => m.trim()))] : [];
+}
 //# sourceMappingURL=agent-tools.js.map

package/dist/cli/services/tools/agent-tools.js.map

@@ -1 +1 @@
-{"version":3,"file":"agent-tools.js","names":["readFileSync","existsSync","dirname","join","MEMORY_FILE","COMMANDS_DIR","runSubagent","runSubagentBackground","createTurnContext","getTurnNumber","runAgentTeam","runAutoTeam","readAgentOutput","stopBackgroundAgent","readProcessOutput","killProcess","getGlobalEmitter","executeLSP","debugLog","setPermissionMode","getPermissionMode","getModel","setModel","configTool","input","setting","value","success","output","result","error","model","includes","message","memPath","content","length","slice","askUser","question","options","emitter","emit","optionLines","map","o","i","label","description","lspTool","operation","skillTool","skillName","skill","args","split","filter","Boolean","localPath","process","cwd","globalPath","thisFileDir","URL","import","meta","url","pathname","builtinPaths","template","source","candidates","p","path","src","startsWith","endIdx","indexOf","trim","expanded","replace","RegExp","getParentTraceContext","ctx","traceId","spanId","conversationId","turnNumber","userId","userEmail","taskTool","signal","prompt","subagent_type","runInBackground","run_in_background","maxTurns","max_turns","agentName","name","teamName","team_name","mode","agentId","outputFile","parentTraceContext","err","taskOutputDedup","Map","TASK_OUTPUT_DEDUP_LIMIT","simpleHash","s","h","charCodeAt","taskOutput","taskId","task_id","block","timeout","Math","min","agentResult","status","start","Date","now","Promise","r","setTimeout","updated","delete","final","dedupTaskOutput","statusIcon","lines","push","exitCode","undefined","newOutput","newErrors","hash","prev","get","count","set","entry","taskStop","teamCreateTool","teammateCount","teammate_count","tasksInput","tasks","config","durationMs","toFixed","tokensUsed","task","taskResults","icon","teamAutoTool","maxTeammates","max_teammates","workingDirectory","working_directory","review","warnings","w","t"],"sources":["../../../../src/cli/services/tools/agent-tools.ts"],"sourcesContent":["/**\n * Agent Tools — task, team_create, task_output, task_stop, config, ask_user, lsp, skill\n *\n * Extracted from local-tools.ts for single-responsibility.\n */\n\nimport { readFileSync, existsSync } from \"fs\";\nimport { dirname, join } from \"path\";\nimport { MEMORY_FILE, COMMANDS_DIR } from \"../paths.js\";\nimport {\n  runSubagent,\n  runSubagentBackground,\n  type SubagentType,\n  type ParentTraceContext,\n} from \"../subagent.js\";\nimport {\n  createTurnContext,\n  getTurnNumber,\n} from \"../telemetry.js\";\nimport {\n  runAgentTeam,\n  runAutoTeam,\n  type TeamConfig,\n} from \"../team-lead.js\";\nimport { readAgentOutput, stopBackgroundAgent } from \"../background-processes.js\";\nimport { readProcessOutput, killProcess } from \"../background-processes.js\";\nimport { getGlobalEmitter } from \"../agent-events.js\";\nimport { executeLSP } from \"../lsp-manager.js\";\nimport { debugLog } from \"../debug-log.js\";\nimport { setPermissionMode, getPermissionMode } from \"../permission-modes.js\";\nimport { getModel, setModel } from \"../model-manager.js\";\nimport { ToolResult } from \"../../../shared/types.js\";\n\n// ============================================================================\n// CONFIG TOOL\n// ============================================================================\n\nexport function configTool(input: Record<string, unknown>): ToolResult {\n  const setting = input.setting as string;\n  const value = input.value as string | undefined;\n\n  switch (setting) {\n    case \"model\": {\n      if (!value) return { success: true, output: `Current model: ${getModel()}` };\n      const result = setModel(value);\n      if (!result.success) {\n        return { success: false, output: result.error || `Unknown model: ${value}` };\n      }\n      return { success: true, output: `Model set to: ${result.model}` };\n    }\n\n    case \"mode\":\n    case \"permission_mode\": {\n      if (!value) return { success: true, output: `Current mode: ${getPermissionMode()}` };\n      if (![\"default\", \"plan\", \"yolo\"].includes(value)) {\n        return { success: false, output: `Invalid mode: ${value}. Use: default, plan, yolo` };\n      }\n      const result = setPermissionMode(value as \"default\" | \"plan\" | \"yolo\");\n      return { success: result.success, output: result.message };\n    }\n\n    case \"memory\": {\n      if (!value) {\n        const memPath = MEMORY_FILE;\n        if (!existsSync(memPath)) return { success: true, output: \"No memory file found.\" };\n        const content = readFileSync(memPath, \"utf-8\");\n        return { success: true, output: `Memory (${content.length} chars):\\n${content.slice(0, 20_000)}` };\n      }\n      return { success: false, output: \"Use read_file/write_file to edit memory directly.\" };\n    }\n\n    default:\n      return { success: false, output: `Unknown setting: ${setting}. Available: model, mode, memory` };\n  }\n}\n\n// ============================================================================\n// ASK USER\n// ============================================================================\n\nexport function askUser(input: Record<string, unknown>): ToolResult {\n  const question = input.question as string;\n  const options = input.options as Array<{ label: string; description: string }>;\n\n  if (!question) return { success: false, output: \"question is required\" };\n  if (!options || options.length < 2) return { success: false, output: \"at least 2 options required\" };\n\n  // Emit the question via the global event emitter for the UI to render\n  const emitter = getGlobalEmitter();\n  if (emitter) {\n    emitter.emit(\"ask_user\", { question, options });\n  }\n\n  // Format question as text for the model to see in the response\n  const optionLines = options.map((o, i) => `  ${i + 1}. **${o.label}** — ${o.description}`).join(\"\\n\");\n  return {\n    success: true,\n    output: `Question presented to user:\\n${question}\\n\\nOptions:\\n${optionLines}\\n\\n(Waiting for user response...)`,\n  };\n}\n\n// ============================================================================\n// LSP TOOL\n// ============================================================================\n\nexport async function lspTool(input: Record<string, unknown>): Promise<ToolResult> {\n  const operation = input.operation as string;\n  if (!operation) return { success: false, output: \"operation is required\" };\n  return await executeLSP(operation, input);\n}\n\n// ============================================================================\n// SKILL TOOL\n// ============================================================================\n\nexport function skillTool(input: Record<string, unknown>): ToolResult {\n  const skillName = input.skill as string;\n  if (!skillName) return { success: false, output: \"skill name is required\" };\n\n  const args = ((input.args as string) || \"\").split(/\\s+/).filter(Boolean);\n\n  // Resolution order:\n  // 1. .whale/commands/{skill}.md (project-local)\n  // 2. ~/.whale/commands/{skill}.md (user global)\n  // 3. Built-in skills bundled with package\n\n  const localPath = join(process.cwd(), \".whale\", \"commands\", `${skillName}.md`);\n  const globalPath = join(COMMANDS_DIR, `${skillName}.md`);\n  // Built-in skills: check both dist/ and src/ locations\n  const thisFileDir = dirname(new URL(import.meta.url).pathname);\n  const builtinPaths = [\n    join(thisFileDir, \"..\", \"builtin-skills\", `${skillName}.md`),           // dist/cli/services/tools/../builtin-skills/\n    join(thisFileDir, \"..\", \"..\", \"..\", \"..\", \"src\", \"cli\", \"services\", \"builtin-skills\", `${skillName}.md`), // src/ from dist/\n  ];\n\n  let template: string | null = null;\n  let source = \"\";\n\n  // Check local -> global -> builtin (multiple paths)\n  const candidates: Array<[string, string]> = [\n    [localPath, \"local\"],\n    [globalPath, \"global\"],\n    ...builtinPaths.map(p => [p, \"builtin\"] as [string, string]),\n  ];\n  for (const [path, src] of candidates) {\n    if (existsSync(path)) {\n      try {\n        let content = readFileSync(path, \"utf-8\");\n        // Strip frontmatter\n        if (content.startsWith(\"---\")) {\n          const endIdx = content.indexOf(\"---\", 3);\n          if (endIdx !== -1) {\n            content = content.slice(endIdx + 3).trim();\n          }\n        }\n        template = content;\n        source = src;\n        break;\n      } catch { /* skip */ }\n    }\n  }\n\n  if (!template) {\n    return {\n      success: false,\n      output: `Skill not found: ${skillName}. Available locations:\\n  .whale/commands/${skillName}.md\\n  ~/.whale/commands/${skillName}.md\\n\\nBuilt-in skills: commit, review, review-pr`,\n    };\n  }\n\n  // Expand arguments ($1, $2, $ARGS)\n  let expanded = template;\n  for (let i = 0; i < args.length; i++) {\n    expanded = expanded.replace(new RegExp(`\\\\$${i + 1}`, \"g\"), args[i]);\n  }\n  expanded = expanded.replace(/\\$ARGS/g, args.join(\" \"));\n  expanded = expanded.replace(/\\$\\d+/g, \"\"); // Clean up unused\n\n  return {\n    success: true,\n    output: `[Skill: ${skillName} (${source})]\\n\\n${expanded.trim()}`,\n  };\n}\n\n// ============================================================================\n// TASK TOOL — subagent execution\n// ============================================================================\n\n/** Create parent trace context for subagent hierarchy */\nfunction getParentTraceContext(): ParentTraceContext {\n  const ctx = createTurnContext();\n  return {\n    traceId: ctx.traceId!,\n    spanId: ctx.spanId!,\n    conversationId: ctx.conversationId,\n    turnNumber: getTurnNumber(),\n    userId: ctx.userId,\n    userEmail: ctx.userEmail,\n  };\n}\n\nexport async function taskTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const prompt = input.prompt as string;\n  const subagent_type = input.subagent_type as SubagentType;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"haiku\";\n  const runInBackground = input.run_in_background as boolean | undefined;\n  const maxTurns = input.max_turns as number | undefined;\n  const agentName = input.name as string | undefined;\n  const teamName = input.team_name as string | undefined;\n  const mode = input.mode as string | undefined;\n\n  if (!prompt) return { success: false, output: \"prompt is required\" };\n  if (!subagent_type) return { success: false, output: \"subagent_type is required\" };\n\n  // Apply permission mode for subagent if specified\n  if (mode) {\n    setPermissionMode(mode as \"default\" | \"plan\" | \"yolo\");\n    // Note: mode resets are handled by subagent isolation\n  }\n\n  debugLog(\"tools\", `task: ${agentName || subagent_type}`, { model, maxTurns, teamName, mode });\n\n  try {\n    // Background mode: start agent, return output file path immediately\n    if (runInBackground) {\n      const { agentId, outputFile } = await runSubagentBackground({\n        prompt,\n        subagent_type,\n        model,\n        max_turns: maxTurns,\n        name: agentName,\n        run_in_background: true,\n        parentTraceContext: getParentTraceContext(),\n      });\n\n      return {\n        success: true,\n        output: `Background agent started.\\n  agent_id: ${agentId}\\n  output_file: ${outputFile}\\n\\nUse task_output with task_id=\"${agentId}\" to check progress.`,\n      };\n    }\n\n    // Foreground mode: run agent synchronously\n    const result = await runSubagent({\n      prompt,\n      subagent_type,\n      model,\n      max_turns: maxTurns,\n      name: agentName,\n      parentTraceContext: getParentTraceContext(),\n      signal,\n    });\n\n    return {\n      success: result.success,\n      output: result.output,\n    };\n  } catch (err: any) {\n    return {\n      success: false,\n      output: `Task failed: ${err.message || err}`,\n    };\n  }\n}\n\n// ============================================================================\n// TASK OUTPUT / TASK STOP\n// ============================================================================\n\n/**\n * Tracks consecutive identical outputs per task to detect polling loops.\n * Key: taskId, Value: { hash of last output, consecutive count }\n */\nconst taskOutputDedup = new Map<string, { hash: number; count: number }>();\nconst TASK_OUTPUT_DEDUP_LIMIT = 3; // After 3 identical results, warn the model\n\nfunction simpleHash(s: string): number {\n  let h = 0;\n  for (let i = 0; i < s.length; i++) {\n    h = ((h << 5) - h + s.charCodeAt(i)) | 0;\n  }\n  return h;\n}\n\nexport async function taskOutput(input: Record<string, unknown>): Promise<ToolResult> {\n  const taskId = input.task_id as string;\n  const block = (input.block as boolean) ?? true;\n  const timeout = Math.min((input.timeout as number) || 30000, 120000);\n\n  if (!taskId) return { success: false, output: \"task_id is required\" };\n\n  // Check if it's a background agent (agent-xxx prefix)\n  if (taskId.startsWith(\"agent-\")) {\n    const agentResult = readAgentOutput(taskId);\n    if (!agentResult) return { success: false, output: `Agent not found: ${taskId}. Use list_shells to see available tasks.` };\n\n    // If blocking and still running, poll until done or timeout\n    if (block && agentResult.status === \"running\") {\n      const start = Date.now();\n      while (Date.now() - start < timeout) {\n        await new Promise(r => setTimeout(r, 1000));\n        const updated = readAgentOutput(taskId);\n        if (updated && updated.status !== \"running\") {\n          // Agent finished — clear dedup tracker\n          taskOutputDedup.delete(taskId);\n          return { success: true, output: updated.output };\n        }\n      }\n      const final = readAgentOutput(taskId);\n      const output = `${final?.output || \"\"}\\n(timed out waiting — agent may still be running)`.trim();\n\n      // Track repeated identical output to detect polling loops\n      return dedupTaskOutput(taskId, output);\n    }\n\n    // Agent already done — clear dedup tracker\n    if (agentResult.status !== \"running\") {\n      taskOutputDedup.delete(taskId);\n    }\n    return { success: true, output: agentResult.output };\n  }\n\n  // Fall back to shell process output (bash_output behavior)\n  const result = readProcessOutput(taskId, {});\n  if (\"error\" in result) return { success: false, output: result.error };\n\n  const statusIcon = result.status === \"running\" ? \"\\u25CF\" : result.status === \"completed\" ? \"\\u2713\" : \"\\u2715\";\n  const lines: string[] = [];\n  lines.push(`${statusIcon} Task ${taskId} — ${result.status}`);\n  if (result.exitCode !== undefined) lines.push(`  Exit code: ${result.exitCode}`);\n  if (result.newOutput) { lines.push(`  Output:`); lines.push(result.newOutput); }\n  if (result.newErrors) { lines.push(`  Errors:`); lines.push(result.newErrors); }\n  if (!result.newOutput && !result.newErrors) lines.push(\"  (no new output since last check)\");\n\n  const output = lines.join(\"\\n\");\n  return result.status === \"running\" ? dedupTaskOutput(taskId, output) : { success: true, output };\n}\n\n/**\n * Check for repeated identical output from a running task.\n * After TASK_OUTPUT_DEDUP_LIMIT identical results, append a warning\n * telling the model to stop polling and do other work instead.\n */\nfunction dedupTaskOutput(taskId: string, output: string): ToolResult {\n  const hash = simpleHash(output);\n  const prev = taskOutputDedup.get(taskId);\n\n  if (prev && prev.hash === hash) {\n    prev.count++;\n  } else {\n    taskOutputDedup.set(taskId, { hash, count: 1 });\n  }\n\n  const entry = taskOutputDedup.get(taskId)!;\n  if (entry.count >= TASK_OUTPUT_DEDUP_LIMIT) {\n    return {\n      success: true,\n      output: output + `\\n\\n⚠️ POLLING LOOP DETECTED: You have checked this task ${entry.count} times with identical output. The task is still running — STOP polling and move on to other work. The result will be available when the task completes.`,\n    };\n  }\n\n  return { success: true, output };\n}\n\nexport function taskStop(input: Record<string, unknown>): ToolResult {\n  const taskId = input.task_id as string;\n  if (!taskId) return { success: false, output: \"task_id is required\" };\n\n  // Check if it's a background agent\n  if (taskId.startsWith(\"agent-\")) {\n    const result = stopBackgroundAgent(taskId);\n    return { success: result.success, output: result.message };\n  }\n\n  // Fall back to shell kill\n  const result = killProcess(taskId);\n  return { success: result.success, output: result.message };\n}\n\n// ============================================================================\n// TEAM CREATE\n// ============================================================================\n\nexport async function teamCreateTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const name = input.name as string;\n  const teammateCount = input.teammate_count as number;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"sonnet\";\n  const tasksInput = input.tasks as Array<{\n    description: string;\n    model?: string;\n    files?: string[];\n    dependencies?: string[];\n  }>;\n\n  if (!name) return { success: false, output: \"name is required\" };\n  if (!teammateCount || teammateCount < 1) {\n    return { success: false, output: \"teammate_count must be at least 1\" };\n  }\n  if (!tasksInput || tasksInput.length === 0) {\n    return { success: false, output: \"tasks array is required and must not be empty\" };\n  }\n\n  // Validate task count vs teammate count\n  if (tasksInput.length < teammateCount) {\n    return {\n      success: false,\n      output: `Not enough tasks (${tasksInput.length}) for ${teammateCount} teammates. Add more tasks or reduce teammates.`,\n    };\n  }\n\n  const config: TeamConfig = {\n    name,\n    teammateCount,\n    model,\n    tasks: tasksInput,\n  };\n\n  try {\n    const result = await runAgentTeam(config, signal);\n\n    // Build summary output\n    const lines: string[] = [\n      `## Team: ${name}`,\n      `Status: ${result.success ? \"SUCCESS\" : \"PARTIAL\"}`,\n      `Duration: ${(result.durationMs / 1000).toFixed(1)}s`,\n      `Tokens: ${result.tokensUsed.input} in, ${result.tokensUsed.output} out`,\n      \"\",\n      \"### Task Results\",\n    ];\n\n    for (const task of result.taskResults) {\n      const icon = task.status === \"completed\" ? \"[done]\" : \"[fail]\";\n      lines.push(`${icon} ${task.description}`);\n      if (task.result) {\n        lines.push(`    ${task.result.slice(0, 200)}${task.result.length > 200 ? \"...\" : \"\"}`);\n      }\n    }\n\n    return {\n      success: result.success,\n      output: lines.join(\"\\n\"),\n    };\n  } catch (err: any) {\n    return {\n      success: false,\n      output: `Team failed: ${err.message || err}`,\n    };\n  }\n}\n\n// ============================================================================\n// TEAM AUTO — auto-decompose + parallel execution + review\n// ============================================================================\n\nexport async function teamAutoTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const task = input.task as string;\n  if (!task) return { success: false, output: \"task is required\" };\n\n  const maxTeammates = (input.max_teammates as number) || 4;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"sonnet\";\n  const workingDirectory = (input.working_directory as string) || process.cwd();\n  const review = input.review !== false;\n\n  try {\n    const result = await runAutoTeam(task, {\n      maxTeammates,\n      model,\n      workingDirectory,\n      review,\n      signal,\n    });\n\n    const lines: string[] = [\n      `## Auto Team`,\n      `Status: ${result.success ? \"SUCCESS\" : \"PARTIAL\"}`,\n      `Duration: ${(result.durationMs / 1000).toFixed(1)}s`,\n      `Tokens: ${result.tokensUsed.input} in, ${result.tokensUsed.output} out`,\n    ];\n\n    if (result.warnings?.length) {\n      lines.push(\"\", \"### Warnings\");\n      for (const w of result.warnings) lines.push(`- ${w}`);\n    }\n\n    lines.push(\"\", \"### Task Results\");\n    for (const t of result.taskResults) {\n      const icon = t.status === \"completed\" ? \"[done]\" : \"[fail]\";\n      lines.push(`${icon} ${t.description.slice(0, 120)}`);\n      if (t.result) {\n        lines.push(`    ${t.result.slice(0, 200)}${t.result.length > 200 ? \"...\" : \"\"}`);\n      }\n    }\n\n    if (result.review) {\n      lines.push(\"\", \"### Review\", result.review);\n    }\n\n    return { success: result.success, output: lines.join(\"\\n\") };\n  } catch (err: any) {\n    return { success: false, output: 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Use: default, plan, yolo` };\n      }\n      const result = setPermissionMode(value as \"default\" | \"plan\" | \"yolo\");\n      return { success: result.success, output: result.message };\n    }\n\n    case \"memory\": {\n      if (!value) {\n        const memPath = MEMORY_FILE;\n        if (!existsSync(memPath)) return { success: true, output: \"No memory file found.\" };\n        const content = readFileSync(memPath, \"utf-8\");\n        return { success: true, output: `Memory (${content.length} chars):\\n${content.slice(0, 20_000)}` };\n      }\n      return { success: false, output: \"Use read_file/write_file to edit memory directly.\" };\n    }\n\n    default:\n      return { success: false, output: `Unknown setting: ${setting}. Available: model, mode, memory` };\n  }\n}\n\n// ============================================================================\n// ASK USER\n// ============================================================================\n\nexport function askUser(input: Record<string, unknown>): ToolResult {\n  const question = input.question as string;\n  const options = input.options as Array<{ label: string; description: string }>;\n\n  if (!question) return { success: false, output: \"question is required\" };\n  if (!options || options.length < 2) return { success: false, output: \"at least 2 options required\" };\n\n  // Emit the question via the global event emitter for the UI to render\n  const emitter = getGlobalEmitter();\n  if (emitter) {\n    emitter.emit(\"ask_user\", { question, options });\n  }\n\n  // Format question as text for the model to see in the response\n  const optionLines = options.map((o, i) => `  ${i + 1}. **${o.label}** — ${o.description}`).join(\"\\n\");\n  return {\n    success: true,\n    output: `Question presented to user:\\n${question}\\n\\nOptions:\\n${optionLines}\\n\\n(Waiting for user response...)`,\n  };\n}\n\n// ============================================================================\n// LSP TOOL\n// ============================================================================\n\nexport async function lspTool(input: Record<string, unknown>): Promise<ToolResult> {\n  const operation = input.operation as string;\n  if (!operation) return { success: false, output: \"operation is required\" };\n  return await executeLSP(operation, input);\n}\n\n// ============================================================================\n// SKILL TOOL\n// ============================================================================\n\nexport function skillTool(input: Record<string, unknown>): ToolResult {\n  const skillName = input.skill as string;\n  if (!skillName) return { success: false, output: \"skill name is required\" };\n\n  const args = ((input.args as string) || \"\").split(/\\s+/).filter(Boolean);\n\n  // Resolution order:\n  // 1. .whale/commands/{skill}.md (project-local)\n  // 2. ~/.whale/commands/{skill}.md (user global)\n  // 3. Built-in skills bundled with package\n\n  const localPath = join(process.cwd(), \".whale\", \"commands\", `${skillName}.md`);\n  const globalPath = join(COMMANDS_DIR, `${skillName}.md`);\n  // Built-in skills: check both dist/ and src/ locations\n  const thisFileDir = dirname(new URL(import.meta.url).pathname);\n  const builtinPaths = [\n    join(thisFileDir, \"..\", \"builtin-skills\", `${skillName}.md`),           // dist/cli/services/tools/../builtin-skills/\n    join(thisFileDir, \"..\", \"..\", \"..\", \"..\", \"src\", \"cli\", \"services\", \"builtin-skills\", `${skillName}.md`), // src/ from dist/\n  ];\n\n  let template: string | null = null;\n  let source = \"\";\n\n  // Check local -> global -> builtin (multiple paths)\n  const candidates: Array<[string, string]> = [\n    [localPath, \"local\"],\n    [globalPath, \"global\"],\n    ...builtinPaths.map(p => [p, \"builtin\"] as [string, string]),\n  ];\n  for (const [path, src] of candidates) {\n    if (existsSync(path)) {\n      try {\n        let content = readFileSync(path, \"utf-8\");\n        // Strip frontmatter\n        if (content.startsWith(\"---\")) {\n          const endIdx = content.indexOf(\"---\", 3);\n          if (endIdx !== -1) {\n            content = content.slice(endIdx + 3).trim();\n          }\n        }\n        template = content;\n        source = src;\n        break;\n      } catch { /* skip */ }\n    }\n  }\n\n  if (!template) {\n    return {\n      success: false,\n      output: `Skill not found: ${skillName}. Available locations:\\n  .whale/commands/${skillName}.md\\n  ~/.whale/commands/${skillName}.md\\n\\nBuilt-in skills: commit, review, review-pr, verify`,\n    };\n  }\n\n  // Expand arguments ($1, $2, $ARGS)\n  let expanded = template;\n  for (let i = 0; i < args.length; i++) {\n    expanded = expanded.replace(new RegExp(`\\\\$${i + 1}`, \"g\"), args[i]);\n  }\n  expanded = expanded.replace(/\\$ARGS/g, args.join(\" \"));\n  expanded = expanded.replace(/\\$\\d+/g, \"\"); // Clean up unused\n\n  return {\n    success: true,\n    output: `[Skill: ${skillName} (${source})]\\n\\n${expanded.trim()}`,\n  };\n}\n\n// ============================================================================\n// TASK TOOL — subagent execution\n// ============================================================================\n\n/** Create parent trace context for subagent hierarchy */\nfunction getParentTraceContext(): ParentTraceContext {\n  const ctx = createTurnContext();\n  return {\n    traceId: ctx.traceId!,\n    spanId: ctx.spanId!,\n    conversationId: ctx.conversationId,\n    turnNumber: getTurnNumber(),\n    userId: ctx.userId,\n    userEmail: ctx.userEmail,\n  };\n}\n\nexport async function taskTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const prompt = input.prompt as string;\n  const subagent_type = input.subagent_type as SubagentType;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"haiku\";\n  const runInBackground = input.run_in_background as boolean | undefined;\n  const maxTurns = input.max_turns as number | undefined;\n  const agentName = input.name as string | undefined;\n  const teamName = input.team_name as string | undefined;\n  const mode = input.mode as string | undefined;\n\n  if (!prompt) return { success: false, output: \"prompt is required\" };\n  if (!subagent_type) return { success: false, output: \"subagent_type is required\" };\n\n  // Apply permission mode for subagent if specified\n  if (mode) {\n    setPermissionMode(mode as \"default\" | \"plan\" | \"yolo\");\n    // Note: mode resets are handled by subagent isolation\n  }\n\n  debugLog(\"tools\", `task: ${agentName || subagent_type}`, { model, maxTurns, teamName, mode });\n\n  try {\n    // Background mode: start agent, return output file path immediately\n    if (runInBackground) {\n      const { agentId, outputFile } = await runSubagentBackground({\n        prompt,\n        subagent_type,\n        model,\n        max_turns: maxTurns,\n        name: agentName,\n        run_in_background: true,\n        parentTraceContext: getParentTraceContext(),\n      });\n\n      return {\n        success: true,\n        output: `Background agent started.\\n  agent_id: ${agentId}\\n  output_file: ${outputFile}\\n\\nUse task_output with task_id=\"${agentId}\" to check progress.`,\n      };\n    }\n\n    // Foreground mode: run agent synchronously\n    const result = await runSubagent({\n      prompt,\n      subagent_type,\n      model,\n      max_turns: maxTurns,\n      name: agentName,\n      parentTraceContext: getParentTraceContext(),\n      signal,\n    });\n\n    return {\n      success: result.success,\n      output: result.output,\n    };\n  } catch (err: any) {\n    return {\n      success: false,\n      output: `Task failed: ${err.message || err}`,\n    };\n  }\n}\n\n// ============================================================================\n// TASK OUTPUT / TASK STOP\n// ============================================================================\n\n/**\n * Tracks consecutive identical outputs per task to detect polling loops.\n * Key: taskId, Value: { hash of last output, consecutive count }\n */\nconst taskOutputDedup = new Map<string, { hash: number; count: number }>();\nconst TASK_OUTPUT_DEDUP_LIMIT = 3; // After 3 identical results, warn the model\n\nfunction simpleHash(s: string): number {\n  let h = 0;\n  for (let i = 0; i < s.length; i++) {\n    h = ((h << 5) - h + s.charCodeAt(i)) | 0;\n  }\n  return h;\n}\n\nexport async function taskOutput(input: Record<string, unknown>): Promise<ToolResult> {\n  const taskId = input.task_id as string;\n  const block = (input.block as boolean) ?? true;\n  const timeout = Math.min((input.timeout as number) || 30000, 120000);\n\n  if (!taskId) return { success: false, output: \"task_id is required\" };\n\n  // Check if it's a running team (team-xxx prefix)\n  if (taskId.startsWith(\"team-\")) {\n    const lead = getRunningTeam(taskId);\n    if (!lead) {\n      taskOutputDedup.delete(taskId);\n      return { success: true, output: `Team ${taskId} completed or not found.` };\n    }\n    const snap = lead.getSnapshot();\n    if (!snap) return { success: false, output: `Team ${taskId} has no state.` };\n\n    // Compact summary — verbose team state handled by TeamPanel in LiveArea\n    const done = snap.progress.completed;\n    const total = snap.progress.total;\n    const elapsed = (snap.elapsedMs / 1000).toFixed(0);\n    const output = `Team \"${snap.teamName}\" — ${done}/${total} tasks (${snap.progress.percentComplete}%) · ${elapsed}s`;\n    return snap.status === \"active\" ? dedupTaskOutput(taskId, output) : { success: true, output };\n  }\n\n  // Check if it's a background agent (agent-xxx prefix)\n  if (taskId.startsWith(\"agent-\")) {\n    const agentResult = readAgentOutput(taskId);\n    if (!agentResult) return { success: false, output: `Agent not found: ${taskId}. Use list_shells to see available tasks.` };\n\n    // If blocking and still running, poll until done or timeout\n    if (block && agentResult.status === \"running\") {\n      const start = Date.now();\n      while (Date.now() - start < timeout) {\n        await new Promise(r => setTimeout(r, 1000));\n        const updated = readAgentOutput(taskId);\n        if (updated && updated.status !== \"running\") {\n          // Agent finished — clear dedup tracker\n          taskOutputDedup.delete(taskId);\n          return { success: true, output: updated.output };\n        }\n      }\n      const final = readAgentOutput(taskId);\n      const output = `${final?.output || \"\"}\\n(timed out waiting — agent may still be running)`.trim();\n\n      // Track repeated identical output to detect polling loops\n      return dedupTaskOutput(taskId, output);\n    }\n\n    // Agent already done — clear dedup tracker\n    if (agentResult.status !== \"running\") {\n      taskOutputDedup.delete(taskId);\n    }\n    return { success: true, output: agentResult.output };\n  }\n\n  // Fall back to shell process output (bash_output behavior)\n  const result = readProcessOutput(taskId, {});\n  if (\"error\" in result) return { success: false, output: result.error };\n\n  const statusIcon = result.status === \"running\" ? \"\\u25CF\" : result.status === \"completed\" ? \"\\u2713\" : \"\\u2715\";\n  const lines: string[] = [];\n  lines.push(`${statusIcon} Task ${taskId} — ${result.status}`);\n  if (result.exitCode !== undefined) lines.push(`  Exit code: ${result.exitCode}`);\n  if (result.newOutput) { lines.push(`  Output:`); lines.push(result.newOutput); }\n  if (result.newErrors) { lines.push(`  Errors:`); lines.push(result.newErrors); }\n  if (!result.newOutput && !result.newErrors) lines.push(\"  (no new output since last check)\");\n\n  const output = lines.join(\"\\n\");\n  return result.status === \"running\" ? dedupTaskOutput(taskId, output) : { success: true, output };\n}\n\n/**\n * Check for repeated identical output from a running task.\n * After TASK_OUTPUT_DEDUP_LIMIT identical results, append a warning\n * telling the model to stop polling and do other work instead.\n */\nfunction dedupTaskOutput(taskId: string, output: string): ToolResult {\n  const hash = simpleHash(output);\n  const prev = taskOutputDedup.get(taskId);\n\n  if (prev && prev.hash === hash) {\n    prev.count++;\n  } else {\n    taskOutputDedup.set(taskId, { hash, count: 1 });\n  }\n\n  const entry = taskOutputDedup.get(taskId)!;\n  if (entry.count >= TASK_OUTPUT_DEDUP_LIMIT) {\n    return {\n      success: true,\n      output: output + `\\n\\n⚠️ POLLING LOOP DETECTED: You have checked this task ${entry.count} times with identical output. The task is still running — STOP polling and move on to other work. The result will be available when the task completes.`,\n    };\n  }\n\n  return { success: true, output };\n}\n\nexport function taskStop(input: Record<string, unknown>): ToolResult {\n  const taskId = input.task_id as string;\n  if (!taskId) return { success: false, output: \"task_id is required\" };\n\n  // Check if it's a team (team-xxx or team-xxx/teammate-yyy)\n  if (taskId.startsWith(\"team-\")) {\n    const slashIdx = taskId.indexOf(\"/\");\n    const teamId = slashIdx > 0 ? taskId.slice(0, slashIdx) : taskId;\n    const teammateId = slashIdx > 0 ? taskId.slice(slashIdx + 1) : undefined;\n\n    const lead = getRunningTeam(teamId);\n    if (!lead) return { success: false, output: `Team not found or already completed: ${teamId}` };\n\n    if (teammateId) {\n      const killed = lead.stopTeammate(teammateId);\n      if (!killed) return { success: false, output: `Teammate not found or already finished: ${teammateId}` };\n      const snap = lead.getSnapshot();\n      const remaining = snap?.teammates.filter(t => t.alive).length ?? 0;\n      return { success: true, output: `Killed teammate ${teammateId}. ${remaining} still running.` };\n    }\n\n    lead.stop();\n    return { success: true, output: `Team ${teamId} stopped. All teammates killed.` };\n  }\n\n  // Check if it's a background agent\n  if (taskId.startsWith(\"agent-\")) {\n    const result = stopBackgroundAgent(taskId);\n    return { success: result.success, output: result.message };\n  }\n\n  // Fall back to shell kill\n  const result = killProcess(taskId);\n  return { success: result.success, output: result.message };\n}\n\n// ============================================================================\n// TEAM CREATE — non-blocking, returns team_id for polling\n// ============================================================================\n\nexport async function teamCreateTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const name = input.name as string;\n  const teammateCount = input.teammate_count as number;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"sonnet\";\n  const tasksInput = input.tasks as Array<{\n    description: string;\n    model?: string;\n    files?: string[];\n    dependencies?: string[];\n  }>;\n\n  if (!name) return { success: false, output: \"name is required\" };\n  if (!teammateCount || teammateCount < 1) {\n    return { success: false, output: \"teammate_count must be at least 1\" };\n  }\n  if (!tasksInput || tasksInput.length === 0) {\n    return { success: false, output: \"tasks array is required and must not be empty\" };\n  }\n\n  if (tasksInput.length < teammateCount) {\n    return {\n      success: false,\n      output: `Not enough tasks (${tasksInput.length}) for ${teammateCount} teammates. Add more tasks or reduce teammates.`,\n    };\n  }\n\n  const config: TeamConfig = {\n    name,\n    teammateCount,\n    model,\n    tasks: tasksInput,\n  };\n\n  try {\n    const { teamId } = await startAgentTeam(config, signal);\n\n    return {\n      success: true,\n      output: [\n        `## Team Started: ${name}`,\n        `task_id: ${teamId}`,\n        `Teammates: ${teammateCount}`,\n        `Tasks: ${tasksInput.length}`,\n        \"\",\n        \"Team is running in the background.\",\n        `Use task_output with task_id=\"${teamId}\" to check progress.`,\n        `Use task_stop with task_id=\"${teamId}\" to kill the team, or task_id=\"${teamId}/<teammate_id>\" to kill a specific teammate.`,\n      ].join(\"\\n\"),\n    };\n  } catch (err: any) {\n    return { success: false, output: `Team failed to start: ${err.message || err}` };\n  }\n}\n\n// ============================================================================\n// TEAM AUTO — non-blocking auto-decompose + parallel execution\n// ============================================================================\n\nexport async function teamAutoTool(input: Record<string, unknown>, signal?: AbortSignal): Promise<ToolResult> {\n  const task = input.task as string;\n  if (!task) return { success: false, output: \"task is required\" };\n\n  const maxTeammates = (input.max_teammates as number) || 4;\n  const model = (input.model as \"sonnet\" | \"opus\" | \"haiku\") || \"sonnet\";\n  const workingDirectory = (input.working_directory as string) || process.cwd();\n\n  try {\n    // Decompose is fast (haiku call), do it synchronously\n    const { decomposeTask, sanitizePrompts } = await import(\"../task-decomposer.js\");\n\n    const decomposition = await decomposeTask(task, {\n      maxCells: maxTeammates,\n      workingDirectory,\n    });\n\n    const warnings = sanitizePrompts(decomposition.sub_tasks);\n\n    // Map sub-tasks to TeamConfig\n    const { readFileSync, statSync } = await import(\"fs\");\n    const { join } = await import(\"path\");\n\n    const tasks = decomposition.sub_tasks.map((st) => {\n      const files = extractFilePaths(st.prompt);\n      return { description: st.prompt, files };\n    });\n\n    const config: TeamConfig = {\n      name: decomposition.summary.slice(0, 60) || \"Auto Team\",\n      teammateCount: tasks.length,\n      model,\n      tasks,\n    };\n\n    const { teamId } = await startAgentTeam(config, signal);\n\n    const lines: string[] = [\n      `## Auto Team Started`,\n      `team_id: ${teamId}`,\n      `Decomposed into ${tasks.length} sub-tasks:`,\n    ];\n\n    for (const t of tasks) {\n      lines.push(`- ${t.description.slice(0, 100)}`);\n    }\n\n    if (warnings.length > 0) {\n      lines.push(\"\", \"### Warnings\");\n      for (const w of warnings) lines.push(`- ${w}`);\n    }\n\n    lines.push(\n      \"\",\n      `Team is running in the background. Use task_output with task_id=\"${teamId}\" to check progress.`,\n      `Use task_stop with task_id=\"${teamId}\" to stop, or task_id=\"${teamId}/<teammate_id>\" for individual.`,\n    );\n\n    return { success: true, output: lines.join(\"\\n\") };\n  } catch (err: any) {\n    return { success: false, output: `Auto team failed: ${err.message || err}` };\n  }\n}\n\n/** Extract file paths mentioned in a sub-task prompt. */\nfunction extractFilePaths(prompt: string): string[] {\n  const matches = prompt.match(/(?:^|\\s)((?:src|lib|app|pages|components|test|spec|public)\\/[\\w./-]+)/gm);\n  return matches ? 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package/dist/cli/services/tools/file-ops-notebook.d.ts

@@ -0,0 +1,9 @@
+/**
+ * File Operations — NotebookEdit, ListDirectory, SearchFiles, SearchContent
+ * Split from file-ops.ts for single-responsibility.
+ */
+import { ToolResult } from "../../../shared/types.js";
+export declare function notebookEdit(input: Record<string, unknown>): ToolResult;
+export declare function listDirectory(input: Record<string, unknown>): ToolResult;
+export declare function searchFiles(input: Record<string, unknown>): ToolResult;
+export declare function searchContent(input: Record<string, unknown>): ToolResult;

package/dist/cli/services/tools/file-ops-notebook.js

@@ -0,0 +1,186 @@
+/**
+ * File Operations — NotebookEdit, ListDirectory, SearchFiles, SearchContent
+ * Split from file-ops.ts for single-responsibility.
+ */
+
+import { readFileSync, writeFileSync, existsSync, readdirSync } from "fs";
+import { execSync } from "child_process";
+import { resolvePath, invalidateCache } from "./file-ops-read.js";
+
+// ============================================================================
+// NOTEBOOK EDIT
+// ============================================================================
+
+export function notebookEdit(input) {
+  const path = resolvePath(input.notebook_path);
+  const newSource = input.new_source || "";
+  const cellType = input.cell_type || "code";
+  const editMode = input.edit_mode || "replace";
+  const cellId = input.cell_id;
+  if (!existsSync(path)) return {
+    success: false,
+    output: `Notebook not found: ${path}`
+  };
+  invalidateCache(path); // Invalidate read cache before notebook edit
+
+  let notebook;
+  try {
+    notebook = JSON.parse(readFileSync(path, "utf-8"));
+  } catch (err) {
+    return {
+      success: false,
+      output: `Failed to parse notebook: ${err}`
+    };
+  }
+  const cells = notebook.cells || [];
+
+  // Find cell by ID or numeric index
+  let cellIndex = -1;
+  if (cellId !== undefined) {
+    cellIndex = cells.findIndex(c => c.id === cellId);
+    if (cellIndex === -1) {
+      const idx = parseInt(cellId, 10);
+      if (!isNaN(idx) && idx >= 0 && idx < cells.length) cellIndex = idx;
+    }
+  }
+
+  // Split source into notebook-format lines (each line ends with \n except last)
+  const sourceLines = newSource.split("\n").map((line, i, arr) => i < arr.length - 1 ? line + "\n" : line);
+  switch (editMode) {
+    case "replace":
+      {
+        if (cellIndex < 0) return {
+          success: false,
+          output: `Cell not found: ${cellId}`
+        };
+        cells[cellIndex].source = sourceLines;
+        if (cellType) cells[cellIndex].cell_type = cellType;
+        break;
+      }
+    case "insert":
+      {
+        const newCell = {
+          cell_type: cellType,
+          source: sourceLines,
+          metadata: {}
+        };
+        if (cellType === "code") {
+          newCell.execution_count = null;
+          newCell.outputs = [];
+        }
+        if (cellIndex >= 0) {
+          cells.splice(cellIndex + 1, 0, newCell);
+        } else {
+          cells.push(newCell);
+        }
+        break;
+      }
+    case "delete":
+      {
+        if (cellIndex < 0) return {
+          success: false,
+          output: `Cell not found: ${cellId}`
+        };
+        cells.splice(cellIndex, 1);
+        break;
+      }
+    default:
+      return {
+        success: false,
+        output: `Unknown edit_mode: ${editMode}`
+      };
+  }
+  notebook.cells = cells;
+  writeFileSync(path, JSON.stringify(notebook, null, 1), "utf-8");
+  return {
+    success: true,
+    output: `Notebook ${editMode}d cell in ${path} (${cells.length} cells total)`
+  };
+}
+
+// ============================================================================
+// LIST DIRECTORY
+// ============================================================================
+
+export function listDirectory(input) {
+  const path = resolvePath(input.path);
+  const recursive = input.recursive ?? false;
+  if (!existsSync(path)) return {
+    success: false,
+    output: `Directory not found: ${path}`
+  };
+  if (recursive) {
+    try {
+      const escapedPath = path.replace(/'/g, "'\\''");
+      const output = execSync(`find '${escapedPath}' -maxdepth 4 -not -path '*/.*' 2>/dev/null | head -200`, {
+        encoding: "utf-8",
+        timeout: 5000
+      });
+      return {
+        success: true,
+        output: output.trim() || "(empty)"
+      };
+    } catch {
+      return {
+        success: false,
+        output: "Failed to list directory recursively"
+      };
+    }
+  }
+  const entries = readdirSync(path, {
+    withFileTypes: true
+  });
+  const lines = entries.map(e => `${e.isDirectory() ? "[dir]  " : "       "}${e.name}`);
+  return {
+    success: true,
+    output: lines.join("\n") || "(empty directory)"
+  };
+}
+
+// ============================================================================
+// SEARCH FILES / SEARCH CONTENT (legacy)
+// ============================================================================
+
+export function searchFiles(input) {
+  const pattern = input.pattern.replace(/'/g, "'\\''");
+  const path = resolvePath(input.path).replace(/'/g, "'\\''");
+  try {
+    const output = execSync(`find '${path}' -name '${pattern}' -type f -not -path '*/.*' 2>/dev/null | head -100`, {
+      encoding: "utf-8",
+      timeout: 10000
+    });
+    return {
+      success: true,
+      output: output.trim() || "No files found"
+    };
+  } catch {
+    return {
+      success: false,
+      output: "Search failed"
+    };
+  }
+}
+export function searchContent(input) {
+  const query = input.query;
+  const path = resolvePath(input.path);
+  const filePattern = input.file_pattern;
+  let cmd = `grep -rn '${query.replace(/'/g, "'\\''")}' '${path.replace(/'/g, "'\\''")}'`;
+  if (filePattern) cmd += ` --include='${filePattern.replace(/'/g, "'\\''")}'`;
+  cmd += " 2>/dev/null | head -50";
+  try {
+    const output = execSync(cmd, {
+      encoding: "utf-8",
+      timeout: 10000
+    });
+    return {
+      success: true,
+      output: output.trim() || "No matches found"
+    };
+  } catch {
+    return {
+      success: true,
+      output: "No matches found"
+    };
+  }
+}
+//# sourceMappingURL=file-ops-notebook.js.map