vxrn 1.13.1 → 1.13.3

package/dist/utils/patches.mjs

@@ -1,7 +1,9 @@
 import { transformSWC } from "@vxrn/compiler";
 import { transformFlowBabel } from "@vxrn/vite-flow";
+import Glob from "fast-glob";
 import findNodeModules from "find-node-modules";
 import FSExtra from "fs-extra";
+import { realpathSync } from "node:fs";
 import { join } from "node:path";
 import { rename } from "node:fs/promises";
 import semver from "semver";
@@ -42,18 +44,35 @@ async function readPatchStats(nodeModulesDir) {
 async function writePatchStats(nodeModulesDir, stats) {
   await FSExtra.writeJSON(join(nodeModulesDir, STATS_FILE), stats);
 }
+function moduleToPnpmStorePattern(moduleName) {
+  return moduleName.replace("/", "+");
+}
 async function applyDependencyPatches(patches, {
   root = process.cwd()
 } = {}) {
-  const nodeModulesDirs = findNodeModules({
+  const patchModuleNames = [...new Set(patches.map(p => p.module))],
+    nodeModulesDirs = findNodeModules({
       cwd: root
     }).flatMap(relativePath => {
       const dir = join(root, relativePath),
-        pnpmDir = join(dir, ".pnpm", "node_modules");
-      return FSExtra.existsSync(pnpmDir) ? [dir, pnpmDir] : [dir];
+        dirs = [dir],
+        pnpmBase = join(dir, ".pnpm");
+      if (!FSExtra.existsSync(pnpmBase)) return dirs;
+      const pnpmHoistedDir = join(pnpmBase, "node_modules");
+      FSExtra.existsSync(pnpmHoistedDir) && dirs.push(pnpmHoistedDir);
+      for (const moduleName of patchModuleNames) {
+        const storePattern = moduleToPnpmStorePattern(moduleName),
+          storeMatches = Glob.sync(`${storePattern}@*/node_modules`, {
+            cwd: pnpmBase,
+            onlyDirectories: !0
+          });
+        for (const match of storeMatches) dirs.push(join(pnpmBase, match));
+      }
+      return dirs;
     }),
     results = /* @__PURE__ */new Map(),
-    transformWarnedModules = /* @__PURE__ */new Set();
+    transformWarnedModules = /* @__PURE__ */new Set(),
+    patchedRealPaths = /* @__PURE__ */new Set();
   await Promise.all(nodeModulesDirs.map(async nodeModulesDir => {
     const patchStats = await readPatchStats(nodeModulesDir);
     let statsChanged = !1;
@@ -61,6 +80,15 @@ async function applyDependencyPatches(patches, {
       try {
         const nodeModuleDir = join(nodeModulesDir, patch.module);
         if (!FSExtra.existsSync(nodeModuleDir)) return;
+        let realModuleDir;
+        try {
+          realModuleDir = realpathSync(nodeModuleDir);
+        } catch {
+          return;
+        }
+        const dedupKey = `${patches.indexOf(patch)}\0${realModuleDir}`;
+        if (patchedRealPaths.has(dedupKey)) return;
+        patchedRealPaths.add(dedupKey);
         const version = patch.patchFiles.version;
         if (typeof version == "string") {
           const pkgJSON = await FSExtra.readJSON(join(nodeModuleDir, "package.json"));
@@ -175,5 +203,5 @@ async function atomicWriteFile(filePath, contents) {
   const tempPath = filePath + ".vxrn.tmp." + process.pid + "." + Date.now();
   await FSExtra.writeFile(tempPath, contents), await rename(tempPath, filePath);
 }
-export { applyBuiltInPatches, applyDependencyPatches, bailIfExists, bailIfUnchanged };
+export { applyBuiltInPatches, applyDependencyPatches, bailIfExists, bailIfUnchanged, moduleToPnpmStorePattern };
 //# sourceMappingURL=patches.mjs.map

package/dist/utils/patches.mjs.map

@@ -1 +1 @@
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package/dist/utils/patches.native.js

@@ -1,7 +1,9 @@
 import { transformSWC } from "@vxrn/compiler";
 import { transformFlowBabel } from "@vxrn/vite-flow";
+import Glob from "fast-glob";
 import findNodeModules from "find-node-modules";
 import FSExtra from "fs-extra";
+import { realpathSync } from "fs";
 import { join } from "path";
 import { rename } from "fs/promises";
 import semver from "semver";
@@ -138,19 +140,68 @@ async function readPatchStats(nodeModulesDir) {
 async function writePatchStats(nodeModulesDir, stats) {
   await FSExtra.writeJSON(join(nodeModulesDir, STATS_FILE), stats);
 }
+function moduleToPnpmStorePattern(moduleName) {
+  return moduleName.replace("/", "+");
+}
 async function applyDependencyPatches(patches) {
   var {
       root = process.cwd()
     } = arguments.length > 1 && arguments[1] !== void 0 ? arguments[1] : {},
+    patchModuleNames = [...new Set(patches.map(function (p) {
+      return p.module;
+    }))],
     nodeModulesDirs = findNodeModules({
       cwd: root
     }).flatMap(function (relativePath) {
       var dir = join(root, relativePath),
-        pnpmDir = join(dir, ".pnpm", "node_modules");
-      return FSExtra.existsSync(pnpmDir) ? [dir, pnpmDir] : [dir];
+        dirs = [dir],
+        pnpmBase = join(dir, ".pnpm");
+      if (!FSExtra.existsSync(pnpmBase)) return dirs;
+      var pnpmHoistedDir = join(pnpmBase, "node_modules");
+      FSExtra.existsSync(pnpmHoistedDir) && dirs.push(pnpmHoistedDir);
+      var _iteratorNormalCompletion2 = !0,
+        _didIteratorError2 = !1,
+        _iteratorError2 = void 0;
+      try {
+        for (var _iterator2 = patchModuleNames[Symbol.iterator](), _step2; !(_iteratorNormalCompletion2 = (_step2 = _iterator2.next()).done); _iteratorNormalCompletion2 = !0) {
+          var moduleName = _step2.value,
+            storePattern = moduleToPnpmStorePattern(moduleName),
+            storeMatches = Glob.sync(`${storePattern}@*/node_modules`, {
+              cwd: pnpmBase,
+              onlyDirectories: !0
+            }),
+            _iteratorNormalCompletion1 = !0,
+            _didIteratorError1 = !1,
+            _iteratorError1 = void 0;
+          try {
+            for (var _iterator1 = storeMatches[Symbol.iterator](), _step1; !(_iteratorNormalCompletion1 = (_step1 = _iterator1.next()).done); _iteratorNormalCompletion1 = !0) {
+              var match = _step1.value;
+              dirs.push(join(pnpmBase, match));
+            }
+          } catch (err) {
+            _didIteratorError1 = !0, _iteratorError1 = err;
+          } finally {
+            try {
+              !_iteratorNormalCompletion1 && _iterator1.return != null && _iterator1.return();
+            } finally {
+              if (_didIteratorError1) throw _iteratorError1;
+            }
+          }
+        }
+      } catch (err) {
+        _didIteratorError2 = !0, _iteratorError2 = err;
+      } finally {
+        try {
+          !_iteratorNormalCompletion2 && _iterator2.return != null && _iterator2.return();
+        } finally {
+          if (_didIteratorError2) throw _iteratorError2;
+        }
+      }
+      return dirs;
     }),
     results = /* @__PURE__ */new Map(),
-    transformWarnedModules = /* @__PURE__ */new Set();
+    transformWarnedModules = /* @__PURE__ */new Set(),
+    patchedRealPaths = /* @__PURE__ */new Set();
   await Promise.all(nodeModulesDirs.map(async function (nodeModulesDir) {
     var patchStats = await readPatchStats(nodeModulesDir),
       statsChanged = !1;
@@ -158,6 +209,16 @@ async function applyDependencyPatches(patches) {
       try {
         var nodeModuleDir = join(nodeModulesDir, patch.module);
         if (!FSExtra.existsSync(nodeModuleDir)) return;
+        var realModuleDir;
+        try {
+          realModuleDir = realpathSync(nodeModuleDir);
+        } catch {
+          return;
+        }
+        var patchIdx = patches.indexOf(patch),
+          dedupKey = `${patchIdx}\0${realModuleDir}`;
+        if (patchedRealPaths.has(dedupKey)) return;
+        patchedRealPaths.add(dedupKey);
         var version = patch.patchFiles.version;
         if (typeof version == "string") {
           var pkgJSON = await FSExtra.readJSON(join(nodeModuleDir, "package.json"));
@@ -330,5 +391,5 @@ async function atomicWriteFile(filePath, contents) {
   var tempPath = filePath + ".vxrn.tmp." + process.pid + "." + Date.now();
   await FSExtra.writeFile(tempPath, contents), await rename(tempPath, filePath);
 }
-export { applyBuiltInPatches, applyDependencyPatches, bailIfExists, bailIfUnchanged };
+export { applyBuiltInPatches, applyDependencyPatches, bailIfExists, bailIfUnchanged, moduleToPnpmStorePattern };
 //# sourceMappingURL=patches.native.js.map

package/dist/utils/patches.native.js.map

@@ -1 +1 @@
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package/dist/utils/patches.test.mjs

@@ -0,0 +1,140 @@
+import FSExtra from "fs-extra";
+import { join } from "node:path";
+import { mkdtemp, rm, symlink } from "node:fs/promises";
+import { tmpdir } from "node:os";
+import { afterEach, beforeEach, describe, expect, it, vi } from "vitest";
+import { applyDependencyPatches, moduleToPnpmStorePattern } from "./patches.mjs";
+vi.mock("@vxrn/compiler", () => ({
+  transformSWC: vi.fn()
+}));
+vi.mock("@vxrn/vite-flow", () => ({
+  transformFlowBabel: vi.fn()
+}));
+function makePkg(name, version, extras) {
+  return JSON.stringify({
+    name,
+    version,
+    ...extras
+  }, null, 2);
+}
+describe("moduleToPnpmStorePattern", () => {
+  it("converts scoped package names", () => {
+    expect(moduleToPnpmStorePattern("@react-navigation/core")).toBe("@react-navigation+core");
+  }), it("converts other scoped packages", () => {
+    expect(moduleToPnpmStorePattern("@expo/cli")).toBe("@expo+cli");
+  }), it("passes through unscoped packages unchanged", () => {
+    expect(moduleToPnpmStorePattern("react-native-web")).toBe("react-native-web");
+  });
+});
+describe("applyDependencyPatches", () => {
+  let tmpDir;
+  beforeEach(async () => {
+    tmpDir = await mkdtemp(join(tmpdir(), "vxrn-patch-test-"));
+  }), afterEach(async () => {
+    await rm(tmpDir, {
+      recursive: !0,
+      force: !0
+    });
+  });
+  async function setupAndPatch(opts) {
+    const nmDir = join(tmpDir, "node_modules");
+    return await FSExtra.ensureDir(nmDir), await opts.setupFs(nmDir), await applyDependencyPatches(opts.patches, {
+      root: tmpDir
+    }), nmDir;
+  }
+  it("discovers packages in pnpm content-addressable store (non-hoisted)", async () => {
+    const nmDir = await setupAndPatch({
+        patches: [{
+          module: "@react-navigation/core",
+          patchFiles: {
+            "package.json": contents => {
+              if (!contents) return;
+              const pkg = JSON.parse(contents);
+              return pkg.exports = pkg.exports || {}, pkg.exports["./lib/module/NavigationBuilderContext"] = "./lib/module/NavigationBuilderContext.js", JSON.stringify(pkg, null, 2);
+            }
+          }
+        }],
+        setupFs: async nm => {
+          const storePkgDir = join(nm, ".pnpm", "@react-navigation+core@7.16.1_react@19.0.0", "node_modules", "@react-navigation", "core");
+          await FSExtra.ensureDir(storePkgDir), await FSExtra.writeFile(join(storePkgDir, "package.json"), makePkg("@react-navigation/core", "7.16.1"));
+        }
+      }),
+      patchedPkg = await FSExtra.readJSON(join(nmDir, ".pnpm", "@react-navigation+core@7.16.1_react@19.0.0", "node_modules", "@react-navigation", "core", "package.json"));
+    expect(patchedPkg.exports["./lib/module/NavigationBuilderContext"]).toBe("./lib/module/NavigationBuilderContext.js");
+  }), it("deduplicates symlink and store entry pointing to same files", async () => {
+    let patchCallCount = 0;
+    await setupAndPatch({
+      patches: [{
+        module: "test-pkg",
+        patchFiles: {
+          "index.js": contents => (patchCallCount++, (contents || "") + `
+// patched`)
+        }
+      }],
+      setupFs: async nm => {
+        const storeDir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(storeDir), await FSExtra.writeFile(join(storeDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(storeDir, "index.js"), "module.exports = {}");
+        const symlinkTarget = join(nm, "test-pkg");
+        await symlink(storeDir, symlinkTarget, "dir");
+        const pnpmHoisted = join(nm, ".pnpm", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(join(nm, ".pnpm", "node_modules")), await symlink(storeDir, pnpmHoisted, "dir");
+      }
+    }), expect(patchCallCount).toBe(1);
+  }), it("patches flat node_modules (non-pnpm regression)", async () => {
+    const nmDir = await setupAndPatch({
+        patches: [{
+          module: "test-pkg",
+          patchFiles: {
+            "index.js": contents => (contents || "") + `
+// patched`
+          }
+        }],
+        setupFs: async nm => {
+          const pkgDir = join(nm, "test-pkg");
+          await FSExtra.ensureDir(pkgDir), await FSExtra.writeFile(join(pkgDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(pkgDir, "index.js"), "module.exports = {}");
+        }
+      }),
+      content = await FSExtra.readFile(join(nmDir, "test-pkg", "index.js"), "utf-8");
+    expect(content).toContain("// patched");
+  }), it("respects version constraints across multiple store versions", async () => {
+    await setupAndPatch({
+      patches: [{
+        module: "test-pkg",
+        patchFiles: {
+          version: "1.*",
+          "index.js": () => "// v1 patched"
+        }
+      }],
+      setupFs: async nm => {
+        const v1Dir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(v1Dir), await FSExtra.writeFile(join(v1Dir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(v1Dir, "index.js"), 'module.exports = "v1"');
+        const v2Dir = join(nm, ".pnpm", "test-pkg@2.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(v2Dir), await FSExtra.writeFile(join(v2Dir, "package.json"), makePkg("test-pkg", "2.0.0")), await FSExtra.writeFile(join(v2Dir, "index.js"), 'module.exports = "v2"');
+      }
+    });
+    const nmDir = join(tmpDir, "node_modules"),
+      v1Content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(v1Content).toBe("// v1 patched");
+    const v2Content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@2.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(v2Content).toBe('module.exports = "v2"');
+  }), it("deduplicates when hoisted symlink and store entry coexist", async () => {
+    let patchCallCount = 0;
+    const nmDir = await setupAndPatch({
+      patches: [{
+        module: "test-pkg",
+        patchFiles: {
+          "index.js": contents => (patchCallCount++, (contents || "") + `
+// marker`)
+        }
+      }],
+      setupFs: async nm => {
+        const storeDir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(storeDir), await FSExtra.writeFile(join(storeDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(storeDir, "index.js"), "module.exports = {}"), await FSExtra.ensureDir(join(nm, ".pnpm", "node_modules")), await symlink(storeDir, join(nm, ".pnpm", "node_modules", "test-pkg"), "dir");
+      }
+    });
+    expect(patchCallCount).toBe(1);
+    const content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(content).toContain("// marker");
+  });
+});
+//# sourceMappingURL=patches.test.mjs.map

package/dist/utils/patches.test.mjs.map

@@ -0,0 +1 @@
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package/dist/utils/patches.test.native.js

@@ -0,0 +1,158 @@
+import FSExtra from "fs-extra";
+import { join } from "path";
+import { mkdtemp, rm, symlink } from "fs/promises";
+import { tmpdir } from "os";
+import { afterEach, beforeEach, describe, expect, it, vi } from "vitest";
+import { applyDependencyPatches, moduleToPnpmStorePattern } from "./patches.native.js";
+vi.mock("@vxrn/compiler", function () {
+  return {
+    transformSWC: vi.fn()
+  };
+});
+vi.mock("@vxrn/vite-flow", function () {
+  return {
+    transformFlowBabel: vi.fn()
+  };
+});
+function makePkg(name, version, extras) {
+  return JSON.stringify({
+    name,
+    version,
+    ...extras
+  }, null, 2);
+}
+describe("moduleToPnpmStorePattern", function () {
+  it("converts scoped package names", function () {
+    expect(moduleToPnpmStorePattern("@react-navigation/core")).toBe("@react-navigation+core");
+  }), it("converts other scoped packages", function () {
+    expect(moduleToPnpmStorePattern("@expo/cli")).toBe("@expo+cli");
+  }), it("passes through unscoped packages unchanged", function () {
+    expect(moduleToPnpmStorePattern("react-native-web")).toBe("react-native-web");
+  });
+});
+describe("applyDependencyPatches", function () {
+  var tmpDir;
+  beforeEach(async function () {
+    tmpDir = await mkdtemp(join(tmpdir(), "vxrn-patch-test-"));
+  }), afterEach(async function () {
+    await rm(tmpDir, {
+      recursive: !0,
+      force: !0
+    });
+  });
+  async function setupAndPatch(opts) {
+    var nmDir = join(tmpDir, "node_modules");
+    return await FSExtra.ensureDir(nmDir), await opts.setupFs(nmDir), await applyDependencyPatches(opts.patches, {
+      root: tmpDir
+    }), nmDir;
+  }
+  it("discovers packages in pnpm content-addressable store (non-hoisted)", async function () {
+    var patches = [{
+        module: "@react-navigation/core",
+        patchFiles: {
+          "package.json": function (contents) {
+            if (contents) {
+              var pkg = JSON.parse(contents);
+              return pkg.exports = pkg.exports || {}, pkg.exports["./lib/module/NavigationBuilderContext"] = "./lib/module/NavigationBuilderContext.js", JSON.stringify(pkg, null, 2);
+            }
+          }
+        }
+      }],
+      nmDir = await setupAndPatch({
+        patches,
+        setupFs: async function (nm) {
+          var storePkgDir = join(nm, ".pnpm", "@react-navigation+core@7.16.1_react@19.0.0", "node_modules", "@react-navigation", "core");
+          await FSExtra.ensureDir(storePkgDir), await FSExtra.writeFile(join(storePkgDir, "package.json"), makePkg("@react-navigation/core", "7.16.1"));
+        }
+      }),
+      patchedPkg = await FSExtra.readJSON(join(nmDir, ".pnpm", "@react-navigation+core@7.16.1_react@19.0.0", "node_modules", "@react-navigation", "core", "package.json"));
+    expect(patchedPkg.exports["./lib/module/NavigationBuilderContext"]).toBe("./lib/module/NavigationBuilderContext.js");
+  }), it("deduplicates symlink and store entry pointing to same files", async function () {
+    var patchCallCount = 0,
+      patches = [{
+        module: "test-pkg",
+        patchFiles: {
+          "index.js": function (contents) {
+            return patchCallCount++, (contents || "") + `
+// patched`;
+          }
+        }
+      }];
+    await setupAndPatch({
+      patches,
+      setupFs: async function (nm) {
+        var storeDir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(storeDir), await FSExtra.writeFile(join(storeDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(storeDir, "index.js"), "module.exports = {}");
+        var symlinkTarget = join(nm, "test-pkg");
+        await symlink(storeDir, symlinkTarget, "dir");
+        var pnpmHoisted = join(nm, ".pnpm", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(join(nm, ".pnpm", "node_modules")), await symlink(storeDir, pnpmHoisted, "dir");
+      }
+    }), expect(patchCallCount).toBe(1);
+  }), it("patches flat node_modules (non-pnpm regression)", async function () {
+    var patches = [{
+        module: "test-pkg",
+        patchFiles: {
+          "index.js": function (contents) {
+            return (contents || "") + `
+// patched`;
+          }
+        }
+      }],
+      nmDir = await setupAndPatch({
+        patches,
+        setupFs: async function (nm) {
+          var pkgDir = join(nm, "test-pkg");
+          await FSExtra.ensureDir(pkgDir), await FSExtra.writeFile(join(pkgDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(pkgDir, "index.js"), "module.exports = {}");
+        }
+      }),
+      content = await FSExtra.readFile(join(nmDir, "test-pkg", "index.js"), "utf-8");
+    expect(content).toContain("// patched");
+  }), it("respects version constraints across multiple store versions", async function () {
+    var patches = [{
+      module: "test-pkg",
+      patchFiles: {
+        version: "1.*",
+        "index.js": function () {
+          return "// v1 patched";
+        }
+      }
+    }];
+    await setupAndPatch({
+      patches,
+      setupFs: async function (nm) {
+        var v1Dir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(v1Dir), await FSExtra.writeFile(join(v1Dir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(v1Dir, "index.js"), 'module.exports = "v1"');
+        var v2Dir = join(nm, ".pnpm", "test-pkg@2.0.0", "node_modules", "test-pkg");
+        await FSExtra.ensureDir(v2Dir), await FSExtra.writeFile(join(v2Dir, "package.json"), makePkg("test-pkg", "2.0.0")), await FSExtra.writeFile(join(v2Dir, "index.js"), 'module.exports = "v2"');
+      }
+    });
+    var nmDir = join(tmpDir, "node_modules"),
+      v1Content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(v1Content).toBe("// v1 patched");
+    var v2Content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@2.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(v2Content).toBe('module.exports = "v2"');
+  }), it("deduplicates when hoisted symlink and store entry coexist", async function () {
+    var patchCallCount = 0,
+      patches = [{
+        module: "test-pkg",
+        patchFiles: {
+          "index.js": function (contents) {
+            return patchCallCount++, (contents || "") + `
+// marker`;
+          }
+        }
+      }],
+      nmDir = await setupAndPatch({
+        patches,
+        setupFs: async function (nm) {
+          var storeDir = join(nm, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg");
+          await FSExtra.ensureDir(storeDir), await FSExtra.writeFile(join(storeDir, "package.json"), makePkg("test-pkg", "1.0.0")), await FSExtra.writeFile(join(storeDir, "index.js"), "module.exports = {}"), await FSExtra.ensureDir(join(nm, ".pnpm", "node_modules")), await symlink(storeDir, join(nm, ".pnpm", "node_modules", "test-pkg"), "dir");
+        }
+      });
+    expect(patchCallCount).toBe(1);
+    var content = await FSExtra.readFile(join(nmDir, ".pnpm", "test-pkg@1.0.0", "node_modules", "test-pkg", "index.js"), "utf-8");
+    expect(content).toContain("// marker");
+  });
+});
+//# sourceMappingURL=patches.test.native.js.map

package/dist/utils/patches.test.native.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "vxrn",
-  "version": "1.13.1",
+  "version": "1.13.3",
   "sideEffects": false,
   "type": "module",
   "exports": {
@@ -59,16 +59,16 @@
     "@expo/config-plugins": "~55.0.6",
     "@hono/node-server": "^1.19.10",
     "@react-native/dev-middleware": "^0.83.4",
-    "@vxrn/compiler": "1.13.1",
-    "@vxrn/debug": "1.13.1",
-    "@vxrn/query-string": "1.13.1",
-    "@vxrn/resolve": "1.13.1",
-    "@vxrn/safe-area": "1.13.1",
-    "@vxrn/url-parse": "1.13.1",
-    "@vxrn/utils": "1.13.1",
-    "@vxrn/vendor": "1.13.1",
-    "@vxrn/vite-flow": "1.13.1",
-    "@vxrn/vite-plugin-metro": "1.13.1",
+    "@vxrn/compiler": "1.13.3",
+    "@vxrn/debug": "1.13.3",
+    "@vxrn/query-string": "1.13.3",
+    "@vxrn/resolve": "1.13.3",
+    "@vxrn/safe-area": "1.13.3",
+    "@vxrn/url-parse": "1.13.3",
+    "@vxrn/utils": "1.13.3",
+    "@vxrn/vendor": "1.13.3",
+    "@vxrn/vite-flow": "1.13.3",
+    "@vxrn/vite-plugin-metro": "1.13.3",
     "citty": "^0.1.6",
     "dotenv": "^17.2.1",
     "dotenv-expand": "^12.0.2",

package/src/utils/patches.test.ts

@@ -0,0 +1,274 @@
+import FSExtra from 'fs-extra'
+import { join } from 'node:path'
+import { mkdtemp, rm, symlink } from 'node:fs/promises'
+import { tmpdir } from 'node:os'
+import { afterEach, beforeEach, describe, expect, it, vi } from 'vitest'
+
+// mock heavy deps that aren't needed for patch resolution tests
+vi.mock('@vxrn/compiler', () => ({ transformSWC: vi.fn() }))
+vi.mock('@vxrn/vite-flow', () => ({ transformFlowBabel: vi.fn() }))
+
+import {
+  type DepPatch,
+  applyDependencyPatches,
+  moduleToPnpmStorePattern,
+} from './patches'
+
+// helper to create a minimal package.json
+function makePkg(name: string, version: string, extras?: Record<string, any>) {
+  return JSON.stringify({ name, version, ...extras }, null, 2)
+}
+
+describe('moduleToPnpmStorePattern', () => {
+  it('converts scoped package names', () => {
+    expect(moduleToPnpmStorePattern('@react-navigation/core')).toBe(
+      '@react-navigation+core'
+    )
+  })
+
+  it('converts other scoped packages', () => {
+    expect(moduleToPnpmStorePattern('@expo/cli')).toBe('@expo+cli')
+  })
+
+  it('passes through unscoped packages unchanged', () => {
+    expect(moduleToPnpmStorePattern('react-native-web')).toBe('react-native-web')
+  })
+})
+
+describe('applyDependencyPatches', () => {
+  let tmpDir: string
+
+  beforeEach(async () => {
+    tmpDir = await mkdtemp(join(tmpdir(), 'vxrn-patch-test-'))
+  })
+
+  afterEach(async () => {
+    await rm(tmpDir, { recursive: true, force: true })
+  })
+
+  // helper to set up node_modules structure and run patches
+  async function setupAndPatch(opts: {
+    patches: DepPatch[]
+    setupFs: (nmDir: string) => Promise<void>
+  }) {
+    const nmDir = join(tmpDir, 'node_modules')
+    await FSExtra.ensureDir(nmDir)
+    await opts.setupFs(nmDir)
+    await applyDependencyPatches(opts.patches, { root: tmpDir })
+    return nmDir
+  }
+
+  it('discovers packages in pnpm content-addressable store (non-hoisted)', async () => {
+    const patches: DepPatch[] = [
+      {
+        module: '@react-navigation/core',
+        patchFiles: {
+          'package.json': (contents) => {
+            if (!contents) return
+            const pkg = JSON.parse(contents)
+            pkg.exports = pkg.exports || {}
+            pkg.exports['./lib/module/NavigationBuilderContext'] =
+              './lib/module/NavigationBuilderContext.js'
+            return JSON.stringify(pkg, null, 2)
+          },
+        },
+      },
+    ]
+
+    const nmDir = await setupAndPatch({
+      patches,
+      setupFs: async (nm) => {
+        // create pnpm store entry (package NOT hoisted to top-level or .pnpm/node_modules)
+        const storePkgDir = join(
+          nm,
+          '.pnpm',
+          '@react-navigation+core@7.16.1_react@19.0.0',
+          'node_modules',
+          '@react-navigation',
+          'core'
+        )
+        await FSExtra.ensureDir(storePkgDir)
+        await FSExtra.writeFile(
+          join(storePkgDir, 'package.json'),
+          makePkg('@react-navigation/core', '7.16.1')
+        )
+      },
+    })
+
+    // verify the patch was applied in the store
+    const patchedPkg = await FSExtra.readJSON(
+      join(
+        nmDir,
+        '.pnpm',
+        '@react-navigation+core@7.16.1_react@19.0.0',
+        'node_modules',
+        '@react-navigation',
+        'core',
+        'package.json'
+      )
+    )
+    expect(patchedPkg.exports['./lib/module/NavigationBuilderContext']).toBe(
+      './lib/module/NavigationBuilderContext.js'
+    )
+  })
+
+  it('deduplicates symlink and store entry pointing to same files', async () => {
+    let patchCallCount = 0
+
+    const patches: DepPatch[] = [
+      {
+        module: 'test-pkg',
+        patchFiles: {
+          'index.js': (contents) => {
+            patchCallCount++
+            return (contents || '') + '\n// patched'
+          },
+        },
+      },
+    ]
+
+    await setupAndPatch({
+      patches,
+      setupFs: async (nm) => {
+        // create the real package in pnpm store
+        const storeDir = join(nm, '.pnpm', 'test-pkg@1.0.0', 'node_modules', 'test-pkg')
+        await FSExtra.ensureDir(storeDir)
+        await FSExtra.writeFile(
+          join(storeDir, 'package.json'),
+          makePkg('test-pkg', '1.0.0')
+        )
+        await FSExtra.writeFile(join(storeDir, 'index.js'), 'module.exports = {}')
+
+        // create symlink at top-level node_modules (like pnpm does when hoisted)
+        const symlinkTarget = join(nm, 'test-pkg')
+        await symlink(storeDir, symlinkTarget, 'dir')
+
+        // also create .pnpm/node_modules hoisted symlink
+        const pnpmHoisted = join(nm, '.pnpm', 'node_modules', 'test-pkg')
+        await FSExtra.ensureDir(join(nm, '.pnpm', 'node_modules'))
+        await symlink(storeDir, pnpmHoisted, 'dir')
+      },
+    })
+
+    // the non-idempotent patch should have been called exactly once due to dedup
+    expect(patchCallCount).toBe(1)
+  })
+
+  it('patches flat node_modules (non-pnpm regression)', async () => {
+    const patches: DepPatch[] = [
+      {
+        module: 'test-pkg',
+        patchFiles: {
+          'index.js': (contents) => {
+            return (contents || '') + '\n// patched'
+          },
+        },
+      },
+    ]
+
+    const nmDir = await setupAndPatch({
+      patches,
+      setupFs: async (nm) => {
+        // standard flat node_modules layout, no .pnpm
+        const pkgDir = join(nm, 'test-pkg')
+        await FSExtra.ensureDir(pkgDir)
+        await FSExtra.writeFile(
+          join(pkgDir, 'package.json'),
+          makePkg('test-pkg', '1.0.0')
+        )
+        await FSExtra.writeFile(join(pkgDir, 'index.js'), 'module.exports = {}')
+      },
+    })
+
+    const content = await FSExtra.readFile(join(nmDir, 'test-pkg', 'index.js'), 'utf-8')
+    expect(content).toContain('// patched')
+  })
+
+  it('respects version constraints across multiple store versions', async () => {
+    const patches: DepPatch[] = [
+      {
+        module: 'test-pkg',
+        patchFiles: {
+          version: '1.*',
+          'index.js': () => '// v1 patched',
+        },
+      },
+    ]
+
+    await setupAndPatch({
+      patches,
+      setupFs: async (nm) => {
+        // v1 store entry
+        const v1Dir = join(nm, '.pnpm', 'test-pkg@1.0.0', 'node_modules', 'test-pkg')
+        await FSExtra.ensureDir(v1Dir)
+        await FSExtra.writeFile(join(v1Dir, 'package.json'), makePkg('test-pkg', '1.0.0'))
+        await FSExtra.writeFile(join(v1Dir, 'index.js'), 'module.exports = "v1"')
+
+        // v2 store entry
+        const v2Dir = join(nm, '.pnpm', 'test-pkg@2.0.0', 'node_modules', 'test-pkg')
+        await FSExtra.ensureDir(v2Dir)
+        await FSExtra.writeFile(join(v2Dir, 'package.json'), makePkg('test-pkg', '2.0.0'))
+        await FSExtra.writeFile(join(v2Dir, 'index.js'), 'module.exports = "v2"')
+      },
+    })
+
+    const nmDir = join(tmpDir, 'node_modules')
+
+    // v1 should be patched
+    const v1Content = await FSExtra.readFile(
+      join(nmDir, '.pnpm', 'test-pkg@1.0.0', 'node_modules', 'test-pkg', 'index.js'),
+      'utf-8'
+    )
+    expect(v1Content).toBe('// v1 patched')
+
+    // v2 should NOT be patched
+    const v2Content = await FSExtra.readFile(
+      join(nmDir, '.pnpm', 'test-pkg@2.0.0', 'node_modules', 'test-pkg', 'index.js'),
+      'utf-8'
+    )
+    expect(v2Content).toBe('module.exports = "v2"')
+  })
+
+  it('deduplicates when hoisted symlink and store entry coexist', async () => {
+    let patchCallCount = 0
+
+    const patches: DepPatch[] = [
+      {
+        module: 'test-pkg',
+        patchFiles: {
+          'index.js': (contents) => {
+            patchCallCount++
+            return (contents || '') + '\n// marker'
+          },
+        },
+      },
+    ]
+
+    const nmDir = await setupAndPatch({
+      patches,
+      setupFs: async (nm) => {
+        // real package in store
+        const storeDir = join(nm, '.pnpm', 'test-pkg@1.0.0', 'node_modules', 'test-pkg')
+        await FSExtra.ensureDir(storeDir)
+        await FSExtra.writeFile(
+          join(storeDir, 'package.json'),
+          makePkg('test-pkg', '1.0.0')
+        )
+        await FSExtra.writeFile(join(storeDir, 'index.js'), 'module.exports = {}')
+
+        // hoisted symlink in .pnpm/node_modules
+        await FSExtra.ensureDir(join(nm, '.pnpm', 'node_modules'))
+        await symlink(storeDir, join(nm, '.pnpm', 'node_modules', 'test-pkg'), 'dir')
+      },
+    })
+
+    expect(patchCallCount).toBe(1)
+
+    // verify the file was actually patched
+    const content = await FSExtra.readFile(
+      join(nmDir, '.pnpm', 'test-pkg@1.0.0', 'node_modules', 'test-pkg', 'index.js'),
+      'utf-8'
+    )
+    expect(content).toContain('// marker')
+  })
+})

package/src/utils/patches.ts

@@ -1,7 +1,9 @@
 import { transformSWC } from '@vxrn/compiler'
 import { transformFlowBabel } from '@vxrn/vite-flow'
+import Glob from 'fast-glob'
 import findNodeModules from 'find-node-modules'
 import FSExtra from 'fs-extra'
+import { realpathSync } from 'node:fs'
 import { join } from 'node:path'
 import { rename } from 'node:fs/promises'
 import semver from 'semver'
@@ -93,22 +95,58 @@ async function writePatchStats(nodeModulesDir: string, stats: PatchStats) {
 
 type PatchResult = 'applied' | 'ok' | 'skipped'
 
+/**
+ * Convert a module name to a pnpm content-addressable store glob pattern.
+ * Scoped packages: @scope/name -> @scope+name
+ * Unscoped packages pass through unchanged.
+ */
+export function moduleToPnpmStorePattern(moduleName: string): string {
+  return moduleName.replace('/', '+')
+}
+
 export async function applyDependencyPatches(
   patches: DepPatch[],
   { root = process.cwd() }: { root?: string } = {}
 ) {
+  // collect unique module names for pnpm store globbing
+  const patchModuleNames = [...new Set(patches.map((p) => p.module))]
+
   const nodeModulesDirs = findNodeModules({ cwd: root }).flatMap((relativePath) => {
     const dir = join(root, relativePath)
+    const dirs = [dir]
+
+    const pnpmBase = join(dir, '.pnpm')
+    if (!FSExtra.existsSync(pnpmBase)) return dirs
+
     // pnpm hoists transitive deps into .pnpm/node_modules/ (symlinks to store)
-    // so we need to patch there too
-    const pnpmDir = join(dir, '.pnpm', 'node_modules')
-    return FSExtra.existsSync(pnpmDir) ? [dir, pnpmDir] : [dir]
+    const pnpmHoistedDir = join(pnpmBase, 'node_modules')
+    if (FSExtra.existsSync(pnpmHoistedDir)) {
+      dirs.push(pnpmHoistedDir)
+    }
+
+    // pnpm content-addressable store: scan for store entries matching our patch modules
+    // handles cases where packages aren't hoisted (strict mode, peer dep conflicts, hoist=false)
+    for (const moduleName of patchModuleNames) {
+      const storePattern = moduleToPnpmStorePattern(moduleName)
+      const storeMatches = Glob.sync(`${storePattern}@*/node_modules`, {
+        cwd: pnpmBase,
+        onlyDirectories: true,
+      })
+      for (const match of storeMatches) {
+        dirs.push(join(pnpmBase, match))
+      }
+    }
+
+    return dirs
   })
 
   // track results per module
   const results = new Map<string, PatchResult>()
   // track modules that already warned about transform failures (to avoid spam)
   const transformWarnedModules = new Set<string>()
+  // track real paths per (patch index, real dir) to prevent double-patching
+  // when symlinks and store entries resolve to the same physical files
+  const patchedRealPaths = new Set<string>()
 
   await Promise.all(
     nodeModulesDirs.map(async (nodeModulesDir) => {
@@ -123,6 +161,19 @@ export async function applyDependencyPatches(
 
             if (!FSExtra.existsSync(nodeModuleDir)) return
 
+            // deduplicate by real path to avoid patching the same files twice
+            // (multiple symlinks/paths can resolve to the same pnpm store entry)
+            let realModuleDir: string
+            try {
+              realModuleDir = realpathSync(nodeModuleDir)
+            } catch {
+              return
+            }
+            const patchIdx = patches.indexOf(patch)
+            const dedupKey = `${patchIdx}\0${realModuleDir}`
+            if (patchedRealPaths.has(dedupKey)) return
+            patchedRealPaths.add(dedupKey)
+
             const version = patch.patchFiles.version
             if (typeof version === 'string') {
               const pkgJSON = await FSExtra.readJSON(join(nodeModuleDir, 'package.json'))

package/types/utils/patches.d.ts

@@ -13,6 +13,12 @@ export declare function bailIfUnchanged(obj1: any, obj2: any): void;
 export declare function bailIfExists(haystack: string, needle: string): void;
 export type SimpleDepPatchObject = Record<string, DepPatch['patchFiles']>;
 export declare function applyBuiltInPatches(options: Pick<VXRNOptionsFilled, 'root'>, extraPatches?: SimpleDepPatchObject): Promise<void>;
+/**
+ * Convert a module name to a pnpm content-addressable store glob pattern.
+ * Scoped packages: @scope/name -> @scope+name
+ * Unscoped packages pass through unchanged.
+ */
+export declare function moduleToPnpmStorePattern(moduleName: string): string;
 export declare function applyDependencyPatches(patches: DepPatch[], { root }?: {
     root?: string;
 }): Promise<void>;

package/types/utils/patches.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"patches.d.ts","sourceRoot":"","sources":["../../src/utils/patches.ts"],"names":[],"mappings":"AAOA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAA;AAInE,KAAK,UAAU,GAAG,KAAK,GAAG,MAAM,GAAG,KAAK,CAAA;AAExC,MAAM,MAAM,eAAe,GACvB,CAAC,CAAC,QAAQ,CAAC,EAAE,MAAM,KAAK,IAAI,GAAG,MAAM,GAAG,OAAO,CAAC,IAAI,GAAG,MAAM,CAAC,CAAC,GAC/D,MAAM,GACN,UAAU,EAAE,CAAA;AAEhB,MAAM,MAAM,QAAQ,GAAG;IACrB,MAAM,EAAE,MAAM,CAAA;IACd,UAAU,EAAE;QAAE,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG;QACjC,CAAC,GAAG,EAAE,MAAM,GAAG,eAAe,CAAA;KAC/B,CAAA;CACF,CAAA;AAID,wBAAgB,eAAe,CAAC,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,QAInD;AAED,wBAAgB,YAAY,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,QAI5D;AAED,MAAM,MAAM,oBAAoB,GAAG,MAAM,CAAC,MAAM,EAAE,QAAQ,CAAC,YAAY,CAAC,CAAC,CAAA;AAEzE,wBAAsB,mBAAmB,CACvC,OAAO,EAAE,IAAI,CAAC,iBAAiB,EAAE,MAAM,CAAC,EACxC,YAAY,CAAC,EAAE,oBAAoB,iBA2BpC;AAyBD,wBAAsB,sBAAsB,CAC1C,OAAO,EAAE,QAAQ,EAAE,EACnB,EAAE,IAAoB,EAAE,GAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAA;CAAO,iBAmOjD"}
+{"version":3,"file":"patches.d.ts","sourceRoot":"","sources":["../../src/utils/patches.ts"],"names":[],"mappings":"AASA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAA;AAInE,KAAK,UAAU,GAAG,KAAK,GAAG,MAAM,GAAG,KAAK,CAAA;AAExC,MAAM,MAAM,eAAe,GACvB,CAAC,CAAC,QAAQ,CAAC,EAAE,MAAM,KAAK,IAAI,GAAG,MAAM,GAAG,OAAO,CAAC,IAAI,GAAG,MAAM,CAAC,CAAC,GAC/D,MAAM,GACN,UAAU,EAAE,CAAA;AAEhB,MAAM,MAAM,QAAQ,GAAG;IACrB,MAAM,EAAE,MAAM,CAAA;IACd,UAAU,EAAE;QAAE,OAAO,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG;QACjC,CAAC,GAAG,EAAE,MAAM,GAAG,eAAe,CAAA;KAC/B,CAAA;CACF,CAAA;AAID,wBAAgB,eAAe,CAAC,IAAI,EAAE,GAAG,EAAE,IAAI,EAAE,GAAG,QAInD;AAED,wBAAgB,YAAY,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,QAI5D;AAED,MAAM,MAAM,oBAAoB,GAAG,MAAM,CAAC,MAAM,EAAE,QAAQ,CAAC,YAAY,CAAC,CAAC,CAAA;AAEzE,wBAAsB,mBAAmB,CACvC,OAAO,EAAE,IAAI,CAAC,iBAAiB,EAAE,MAAM,CAAC,EACxC,YAAY,CAAC,EAAE,oBAAoB,iBA2BpC;AAyBD;;;;GAIG;AACH,wBAAgB,wBAAwB,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAEnE;AAED,wBAAsB,sBAAsB,CAC1C,OAAO,EAAE,QAAQ,EAAE,EACnB,EAAE,IAAoB,EAAE,GAAE;IAAE,IAAI,CAAC,EAAE,MAAM,CAAA;CAAO,iBA2QjD"}

package/types/utils/patches.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=patches.test.d.ts.map

package/types/utils/patches.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"patches.test.d.ts","sourceRoot":"","sources":["../../src/utils/patches.test.ts"],"names":[],"mappings":""}