volview 4.0.0

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Files changed (315) hide show
  1. package/.browserslistrc +4 -0
  2. package/.editorconfig +6 -0
  3. package/.env +6 -0
  4. package/.eslintrc.js +109 -0
  5. package/.gitattributes +1 -0
  6. package/.github/workflows/checks.yml +16 -0
  7. package/.github/workflows/publish.yml +52 -0
  8. package/.prettierignore +5 -0
  9. package/CONTRIBUTING.md +29 -0
  10. package/LICENSE +202 -0
  11. package/README.md +44 -0
  12. package/babel.config.js +3 -0
  13. package/documentation/config.js +15 -0
  14. package/documentation/content/KWVolViewLogo.png +0 -0
  15. package/documentation/content/KWVolViewLogo.svg +35 -0
  16. package/documentation/content/VolViewLogo.png +0 -0
  17. package/documentation/content/VolViewLogo.svg +22 -0
  18. package/documentation/content/doc/index.md +64 -0
  19. package/documentation/content/doc/loading_data.md +30 -0
  20. package/documentation/content/doc/mouse_controls.md +34 -0
  21. package/documentation/content/doc/quick_start_guide.md +75 -0
  22. package/documentation/content/doc/rendering.md +27 -0
  23. package/documentation/content/doc/state_files.md +18 -0
  24. package/documentation/content/doc/toolbar.md +20 -0
  25. package/documentation/content/doc/welcome_screen.md +23 -0
  26. package/documentation/content/gallery/01-volview-welcome-notes.jpg +0 -0
  27. package/documentation/content/gallery/01-volview-welcome.jpg +0 -0
  28. package/documentation/content/gallery/02-volview-about.jpg +0 -0
  29. package/documentation/content/gallery/02-volview-notifications.jpg +0 -0
  30. package/documentation/content/gallery/02-volview-settings.jpg +0 -0
  31. package/documentation/content/gallery/03-volview-sample-datasets.jpg +0 -0
  32. package/documentation/content/gallery/04-volview-active-data.jpg +0 -0
  33. package/documentation/content/gallery/05-volview-select-data-to-delete.jpg +0 -0
  34. package/documentation/content/gallery/06-volview-corner-annotation.jpg +0 -0
  35. package/documentation/content/gallery/07-volview-layout-notes.jpg +0 -0
  36. package/documentation/content/gallery/07-volview-layout.jpg +0 -0
  37. package/documentation/content/gallery/09-volview-layout-3DPrimary.jpg +0 -0
  38. package/documentation/content/gallery/10-volview-wl-pan-zoom-notes.jpg +0 -0
  39. package/documentation/content/gallery/10-volview-wl-pan-zoom.jpg +0 -0
  40. package/documentation/content/gallery/11-volview-paint-notes.jpg +0 -0
  41. package/documentation/content/gallery/11-volview-paint.jpg +0 -0
  42. package/documentation/content/gallery/12-volview-paint-options.jpg +0 -0
  43. package/documentation/content/gallery/13-volview-crop-notes.jpg +0 -0
  44. package/documentation/content/gallery/13-volview-crop.jpg +0 -0
  45. package/documentation/content/gallery/14-volview-ruler.jpg +0 -0
  46. package/documentation/content/gallery/15-volview-crosshairs.jpg +0 -0
  47. package/documentation/content/gallery/16-volview-rendering.jpg +0 -0
  48. package/documentation/content/gallery/17-volview-colormap-notes.jpg +0 -0
  49. package/documentation/content/gallery/17-volview-colormap.jpg +0 -0
  50. package/documentation/content/gallery/17-volview-opacity-notes.jpg +0 -0
  51. package/documentation/content/gallery/17-volview-opacity.jpg +0 -0
  52. package/documentation/content/gallery/17-volview-opacity2.jpg +0 -0
  53. package/documentation/content/gallery/18-volview-presets.jpg +0 -0
  54. package/documentation/content/gallery/19-volview-color.jpg +0 -0
  55. package/documentation/content/gallery/19-volview-color2.jpg +0 -0
  56. package/documentation/content/gallery/20-volview-lightfollowcamera0.jpg +0 -0
  57. package/documentation/content/gallery/20-volview-lightfollowcamera1.jpg +0 -0
  58. package/documentation/content/gallery/20-volview-lightfollowcamera2.jpg +0 -0
  59. package/documentation/content/gallery/20-volview-lightfollowcamera3.jpg +0 -0
  60. package/documentation/content/gallery/21-volview-hybrid-final.jpg +0 -0
  61. package/documentation/content/gallery/21-volview-hybrid0.0.jpg +0 -0
  62. package/documentation/content/gallery/21-volview-hybrid0.5.jpg +0 -0
  63. package/documentation/content/gallery/21-volview-hybrid1.0.jpg +0 -0
  64. package/documentation/content/gallery/LocalAmbientOcclusion.jpg +0 -0
  65. package/documentation/content/gallery/Notes.pptx +0 -0
  66. package/documentation/content/gallery/VolView-Overview.jpg +0 -0
  67. package/documentation/content/gallery/index.md +53 -0
  68. package/documentation/content/icon/favicon-16x16.png +0 -0
  69. package/documentation/content/icon/favicon-196x196.png +0 -0
  70. package/documentation/content/icon/favicon-32x32.png +0 -0
  71. package/documentation/content/icon/favicon-96x96.png +0 -0
  72. package/documentation/content/index.pug +43 -0
  73. package/documentation/content/logo.png +0 -0
  74. package/documentation/content/logo.svg +20 -0
  75. package/documentation/data/menu.yml +3 -0
  76. package/documentation/themes/navy/layout/partial/footer.swig +22 -0
  77. package/documentation/tpl/__en__ +31 -0
  78. package/documentation/tpl/__sidebar__ +11 -0
  79. package/package.json +96 -0
  80. package/patches/jsdom-global+3.0.2.patch +12 -0
  81. package/patches/vue-toastification+1.7.14.patch +41 -0
  82. package/patches/vuetify+2.6.10.patch +13 -0
  83. package/prettier.config.js +9 -0
  84. package/public/favicon.ico +0 -0
  85. package/public/global.css +20 -0
  86. package/public/index.html +28 -0
  87. package/public/pvm-sample.png +0 -0
  88. package/server/helper.py +147 -0
  89. package/server/host.js +134 -0
  90. package/server/serialize.js +111 -0
  91. package/server/serialize.py +203 -0
  92. package/server/server.py +84 -0
  93. package/server/test.py +17 -0
  94. package/src/assets/KitwareHeadAndNeck.jpg +0 -0
  95. package/src/assets/logo.png +0 -0
  96. package/src/assets/logo.svg +20 -0
  97. package/src/assets/samples/3DUS-Fetus.jpg +0 -0
  98. package/src/assets/samples/CTA-Head_and_Neck.jpg +0 -0
  99. package/src/assets/samples/MRA-Head_and_Neck.jpg +0 -0
  100. package/src/assets/samples/MRI-Cardiac.jpg +0 -0
  101. package/src/assets/samples/MRI-PROSTATEx.jpg +0 -0
  102. package/src/components/AboutBox.vue +157 -0
  103. package/src/components/AiModule.vue +60 -0
  104. package/src/components/AnnotationsModule.vue +37 -0
  105. package/src/components/App.vue +539 -0
  106. package/src/components/ColorFunctionSlider.vue +181 -0
  107. package/src/components/DataBrowser.vue +173 -0
  108. package/src/components/DragAndDrop.vue +107 -0
  109. package/src/components/GroupableItem.vue +30 -0
  110. package/src/components/ImageDataBrowser.vue +186 -0
  111. package/src/components/ImageListCard.vue +114 -0
  112. package/src/components/ItemGroup.vue +74 -0
  113. package/src/components/LabelmapList.vue +36 -0
  114. package/src/components/LayoutGrid.vue +96 -0
  115. package/src/components/MeasurementsList.vue +134 -0
  116. package/src/components/MessageCenter.vue +189 -0
  117. package/src/components/MessageItem.vue +83 -0
  118. package/src/components/MessageNotificationContent.vue +20 -0
  119. package/src/components/MessageNotifications.vue +84 -0
  120. package/src/components/ModelBrowser.vue +83 -0
  121. package/src/components/ModulePanel.vue +137 -0
  122. package/src/components/PaintControls.vue +174 -0
  123. package/src/components/PatientBrowser.vue +280 -0
  124. package/src/components/PatientStudyVolumeBrowser.vue +325 -0
  125. package/src/components/RenderingModule.vue +49 -0
  126. package/src/components/ResizableNavDrawer.vue +158 -0
  127. package/src/components/SampleDataBrowser.vue +198 -0
  128. package/src/components/SaveSession.vue +57 -0
  129. package/src/components/Settings.vue +35 -0
  130. package/src/components/SliceSlider.vue +182 -0
  131. package/src/components/SpleenModule.vue +101 -0
  132. package/src/components/ToolButton.vue +58 -0
  133. package/src/components/ToolStrip.vue +186 -0
  134. package/src/components/ViewOverlayGrid.vue +84 -0
  135. package/src/components/VolumePresets.vue +165 -0
  136. package/src/components/VolumeProperties.vue +171 -0
  137. package/src/components/VolumeRendering.vue +365 -0
  138. package/src/components/VtkThreeView.vue +512 -0
  139. package/src/components/VtkTwoView.vue +665 -0
  140. package/src/components/__tests__/ResizableNavDrawer.spec.js +32 -0
  141. package/src/components/__tests__/ToolButton.spec.js +46 -0
  142. package/src/components/icons/KitwareLogoIcon.vue +54 -0
  143. package/src/components/icons/VolViewFullLogo.vue +139 -0
  144. package/src/components/icons/VolViewLogo.vue +78 -0
  145. package/src/components/styles/utils.css +16 -0
  146. package/src/components/styles/vtk-view.css +116 -0
  147. package/src/components/tools/CropTool.vue +61 -0
  148. package/src/components/tools/CrosshairsTool.vue +93 -0
  149. package/src/components/tools/MouseManipulatorTool.vue +108 -0
  150. package/src/components/tools/PaintTool.vue +54 -0
  151. package/src/components/tools/PanTool.vue +35 -0
  152. package/src/components/tools/RulerTool.vue +202 -0
  153. package/src/components/tools/SliceScrollTool.vue +123 -0
  154. package/src/components/tools/WindowLevelTool.vue +191 -0
  155. package/src/components/tools/ZoomTool.vue +35 -0
  156. package/src/components/tools/crop/Crop2D.vue +367 -0
  157. package/src/components/tools/crop/Crop2DLineHandle.vue +103 -0
  158. package/src/components/tools/crop/Crop3D.vue +192 -0
  159. package/src/components/tools/crop/CropControls.vue +38 -0
  160. package/src/components/tools/crop/types.ts +12 -0
  161. package/src/components/tools/crosshairs/CrosshairSVG2D.vue +125 -0
  162. package/src/components/tools/crosshairs/CrosshairsWidget2D.vue +100 -0
  163. package/src/components/tools/paint/PaintWidget2D.vue +192 -0
  164. package/src/components/tools/ruler/RulerSVG2D.vue +181 -0
  165. package/src/components/tools/ruler/RulerWidget2D.vue +154 -0
  166. package/src/composables/__tests__/useDoubleRecord.spec.ts +57 -0
  167. package/src/composables/__tests__/useOrientationLabels.spec.ts +29 -0
  168. package/src/composables/isViewAnimating.ts +25 -0
  169. package/src/composables/manageVTKSubscription.ts +6 -0
  170. package/src/composables/onProxyManagerEvent.ts +50 -0
  171. package/src/composables/proxyManager.ts +13 -0
  172. package/src/composables/sync/__tests__/createPrimitiveSyncContext.spec.ts +41 -0
  173. package/src/composables/sync/__tests__/useWindowingSync.spec.ts +51 -0
  174. package/src/composables/sync/createPrimitiveSyncContext.ts +83 -0
  175. package/src/composables/sync/useWindowingSync.ts +48 -0
  176. package/src/composables/useAppLoadingNotifications.ts +73 -0
  177. package/src/composables/useCameraOrientation.ts +34 -0
  178. package/src/composables/useCurrentImage.ts +74 -0
  179. package/src/composables/useCurrentSlice.ts +43 -0
  180. package/src/composables/useDoubleRecord.ts +77 -0
  181. package/src/composables/useEventListener.ts +26 -0
  182. package/src/composables/useGlobalErrorHook.ts +18 -0
  183. package/src/composables/useMultiSelection.ts +29 -0
  184. package/src/composables/useOrientationLabels.ts +62 -0
  185. package/src/composables/usePanels.ts +42 -0
  186. package/src/composables/usePersistCameraConfig.ts +138 -0
  187. package/src/composables/useResizeObserver.ts +37 -0
  188. package/src/composables/useResizeToFit.ts +50 -0
  189. package/src/composables/useSceneBuilder.ts +96 -0
  190. package/src/composables/useToast.js +11 -0
  191. package/src/composables/useVTKCallback.ts +33 -0
  192. package/src/composables/useVTKWorldToDisplay.ts +141 -0
  193. package/src/composables/useViewProxy.ts +87 -0
  194. package/src/composables/useVolumeThumbnailing.ts +173 -0
  195. package/src/composables/useWebGLWatchdog.ts +32 -0
  196. package/src/composables/useWidgetManager.ts +41 -0
  197. package/src/config.ts +182 -0
  198. package/src/constants.ts +38 -0
  199. package/src/core/id.ts +18 -0
  200. package/src/core/provider.ts +31 -0
  201. package/src/core/proxies.ts +90 -0
  202. package/src/core/thumbnailers/__tests__/vtk-image.spec.ts +58 -0
  203. package/src/core/thumbnailers/index.ts +5 -0
  204. package/src/core/thumbnailers/volume-thumbnailer.ts +130 -0
  205. package/src/core/thumbnailers/vtk-image.ts +142 -0
  206. package/src/core/tools/__tests__/paint.spec.ts +101 -0
  207. package/src/core/tools/__tests__/ruler.spec.ts +73 -0
  208. package/src/core/tools/paint/brush.ts +20 -0
  209. package/src/core/tools/paint/ellipse-brush.ts +96 -0
  210. package/src/core/tools/paint/index.ts +141 -0
  211. package/src/core/tools/ruler.ts +149 -0
  212. package/src/global.d.ts +24 -0
  213. package/src/io/__tests__/io.spec.ts +26 -0
  214. package/src/io/dicom.ts +187 -0
  215. package/src/io/index.ts +11 -0
  216. package/src/io/io.ts +157 -0
  217. package/src/io/itk/itkConfig.js +8 -0
  218. package/src/io/itk-dicom/dicom.cpp +327 -0
  219. package/src/io/itk-dicom/web-build/dicom.js +16 -0
  220. package/src/io/itk-dicom/web-build/dicom.umd.js +21 -0
  221. package/src/io/itk-dicom/web-build/dicom.umd.wasm +0 -0
  222. package/src/io/itk-dicom/web-build/dicom.wasm +0 -0
  223. package/src/io/manifest.ts +30 -0
  224. package/src/io/readers.ts +36 -0
  225. package/src/io/state-file/index.ts +170 -0
  226. package/src/io/state-file/schema.ts +277 -0
  227. package/src/io/state-file/utils.ts +33 -0
  228. package/src/io/types.ts +4 -0
  229. package/src/io/vtk/async.reader.worker.ts +50 -0
  230. package/src/io/vtk/async.ts +58 -0
  231. package/src/io/vtk/async.writer.worker.ts +46 -0
  232. package/src/io/vtk/common.ts +30 -0
  233. package/src/io/zip.ts +31 -0
  234. package/src/main.js +66 -0
  235. package/src/main.ts +1 -0
  236. package/src/plugins/vuetify.js +25 -0
  237. package/src/shims-itk.d.ts +67 -0
  238. package/src/shims-misc.d.ts +4 -0
  239. package/src/shims-tsx.d.ts +13 -0
  240. package/src/shims-vtk.d.ts +1042 -0
  241. package/src/shims-vue.d.ts +5 -0
  242. package/src/store/__tests__/datasets.spec.ts +75 -0
  243. package/src/store/__tests__/messages.spec.ts +74 -0
  244. package/src/store/__tests__/rulers.spec.ts +77 -0
  245. package/src/store/__tests__/view-configs.spec.ts +37 -0
  246. package/src/store/datasets-dicom.ts +398 -0
  247. package/src/store/datasets-files.ts +35 -0
  248. package/src/store/datasets-images.ts +118 -0
  249. package/src/store/datasets-labelmaps.ts +136 -0
  250. package/src/store/datasets-models.ts +25 -0
  251. package/src/store/datasets.ts +341 -0
  252. package/src/store/messages.ts +144 -0
  253. package/src/store/tools/crop.ts +136 -0
  254. package/src/store/tools/crosshairs.ts +131 -0
  255. package/src/store/tools/index.ts +95 -0
  256. package/src/store/tools/paint.ts +191 -0
  257. package/src/store/tools/rulers.ts +305 -0
  258. package/src/store/tools/types.ts +54 -0
  259. package/src/store/view-configs/camera.ts +51 -0
  260. package/src/store/view-configs/common.ts +61 -0
  261. package/src/store/view-configs/slicing.ts +86 -0
  262. package/src/store/view-configs/types.ts +39 -0
  263. package/src/store/view-configs/volume-coloring.ts +193 -0
  264. package/src/store/view-configs/windowing.ts +69 -0
  265. package/src/store/view-configs.ts +78 -0
  266. package/src/store/views.ts +130 -0
  267. package/src/types/index.ts +16 -0
  268. package/src/types/layout.ts +10 -0
  269. package/src/types/lps.ts +40 -0
  270. package/src/types/views.ts +65 -0
  271. package/src/types/vtk-types.ts +29 -0
  272. package/src/utils/__tests__/lps.spec.ts +102 -0
  273. package/src/utils/color.ts +23 -0
  274. package/src/utils/errors.js +3 -0
  275. package/src/utils/fetch.ts +101 -0
  276. package/src/utils/hacks.ts +14 -0
  277. package/src/utils/index.ts +83 -0
  278. package/src/utils/lps.ts +129 -0
  279. package/src/utils/manipulators.ts +35 -0
  280. package/src/utils/promise-worker.ts +45 -0
  281. package/src/utils/vtk-helpers.ts +215 -0
  282. package/src/utils/workerHandler.js +42 -0
  283. package/src/vtk/ColorMaps.ts +72 -0
  284. package/src/vtk/CrosshairsWidget/behavior.ts +112 -0
  285. package/src/vtk/CrosshairsWidget/index.d.ts +22 -0
  286. package/src/vtk/CrosshairsWidget/index.js +73 -0
  287. package/src/vtk/CrosshairsWidget/state.ts +51 -0
  288. package/src/vtk/IJKSliceRepresentationProxy/index.d.ts +9 -0
  289. package/src/vtk/IJKSliceRepresentationProxy/index.js +59 -0
  290. package/src/vtk/LPSView2DProxy/index.d.ts +18 -0
  291. package/src/vtk/LPSView2DProxy/index.js +89 -0
  292. package/src/vtk/LPSView3DProxy/index.d.ts +16 -0
  293. package/src/vtk/LPSView3DProxy/index.js +78 -0
  294. package/src/vtk/LabelMap/index.d.ts +16 -0
  295. package/src/vtk/LabelMap/index.js +49 -0
  296. package/src/vtk/LabelMapSliceRepProxy/index.d.ts +6 -0
  297. package/src/vtk/LabelMapSliceRepProxy/index.js +104 -0
  298. package/src/vtk/MedicalColorPresets.json +1448 -0
  299. package/src/vtk/PaintBrushContextRepresentation/index.js +191 -0
  300. package/src/vtk/PaintWidget/behavior.ts +101 -0
  301. package/src/vtk/PaintWidget/index.d.ts +28 -0
  302. package/src/vtk/PaintWidget/index.js +56 -0
  303. package/src/vtk/PaintWidget/state.ts +41 -0
  304. package/src/vtk/PiecewiseWidget/index.js +203 -0
  305. package/src/vtk/RulerWidget/behavior.ts +185 -0
  306. package/src/vtk/RulerWidget/index.d.ts +25 -0
  307. package/src/vtk/RulerWidget/index.js +79 -0
  308. package/src/vtk/RulerWidget/state.ts +63 -0
  309. package/src/vtk/TreJsonConverter/index.js +150 -0
  310. package/src/vtk/proxy.js +66 -0
  311. package/src/vtk/proxyUtils.js +16 -0
  312. package/src/vtk/webvr-empty.js +1 -0
  313. package/tests/testUtils.js +12 -0
  314. package/tsconfig.json +46 -0
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