vemora 0.1.0-alpha.8

package/dist/commands/ask.d.ts

@@ -0,0 +1,14 @@
+export interface AskOptions {
+    /** Number of code chunks to retrieve (default: 5) */
+    topK?: number;
+    /** Force keyword/BM25 search, skip embeddings */
+    keyword?: boolean;
+    /** Use hybrid vector+BM25 search */
+    hybrid?: boolean;
+    /** Max tokens for retrieved context (default: 6000) */
+    budget?: number;
+    /** Print the retrieved context before the answer */
+    showContext?: boolean;
+}
+export declare function runAsk(rootDir: string, question: string, options?: AskOptions): Promise<void>;
+//# sourceMappingURL=ask.d.ts.map

package/dist/commands/ask.d.ts.map

@@ -0,0 +1 @@
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package/dist/commands/ask.js

@@ -0,0 +1,136 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.runAsk = runAsk;
+const chalk_1 = __importDefault(require("chalk"));
+const ora_1 = __importDefault(require("ora"));
+const config_1 = require("../core/config");
+const factory_1 = require("../embeddings/factory");
+const factory_2 = require("../llm/factory");
+const bm25_1 = require("../search/bm25");
+const hybrid_1 = require("../search/hybrid");
+const vector_1 = require("../search/vector");
+const cache_1 = require("../storage/cache");
+const knowledge_1 = require("../storage/knowledge");
+const repository_1 = require("../storage/repository");
+const summaries_1 = require("../storage/summaries");
+const tokenizer_1 = require("../utils/tokenizer");
+const context_1 = require("./context");
+const SYSTEM_PROMPT = "You are an expert software engineer assistant. " +
+    "Answer the user's question accurately and concisely based on the code context provided. " +
+    "Reference specific files and symbols when relevant. " +
+    "If the context does not contain enough information to answer, say so clearly.";
+async function runAsk(rootDir, question, options = {}) {
+    const config = (0, config_1.loadConfig)(rootDir);
+    if (!config.summarization) {
+        console.error(chalk_1.default.red('No LLM configured. Add a "summarization" block to .vemora/config.json.\n\n' +
+            "  Example for Ollama:\n" +
+            '    "summarization": { "provider": "ollama", "model": "qwen2.5-coder:14b" }\n\n' +
+            "  Example for OpenAI:\n" +
+            '    "summarization": { "provider": "openai", "model": "gpt-4o-mini" }'));
+        process.exit(1);
+    }
+    const repo = new repository_1.RepositoryStorage(rootDir);
+    const cacheStorage = new cache_1.EmbeddingCacheStorage(config.projectId);
+    const summaryStorage = new summaries_1.SummaryStorage(rootDir);
+    const topK = options.topK ?? 5;
+    const budget = options.budget ?? 6000;
+    const chunks = repo.loadChunks();
+    const symbols = repo.loadSymbols();
+    const depGraph = repo.loadDeps();
+    const callGraph = repo.loadCallGraph();
+    const fileSummaries = summaryStorage.hasFileSummaries()
+        ? summaryStorage.loadFileSummaries()
+        : {};
+    const projectSummary = summaryStorage.loadProjectSummary();
+    const knowledgeEntries = new knowledge_1.KnowledgeStorage(rootDir).load();
+    if (chunks.length === 0) {
+        console.error(chalk_1.default.red("No index found. Run `vemora index` first."));
+        process.exit(1);
+    }
+    // ── Retrieve context ──────────────────────────────────────────────────────
+    let results = [];
+    const forceKeyword = options.keyword || config.embedding.provider === "none";
+    if (forceKeyword && !options.hybrid) {
+        results = (0, bm25_1.computeBM25Scores)(question, chunks, symbols, topK);
+    }
+    else {
+        const spinner = (0, ora_1.default)("Retrieving context...").start();
+        try {
+            const cache = cacheStorage.load();
+            const cachedCount = cache
+                ? (cache.chunkIds?.length ??
+                    Object.keys(cache.embeddings ?? {}).length)
+                : 0;
+            if (!cache || cachedCount === 0) {
+                spinner.warn("No embeddings found — falling back to keyword search.");
+                results = (0, bm25_1.computeBM25Scores)(question, chunks, symbols, topK);
+            }
+            else {
+                const provider = (0, factory_1.createEmbeddingProvider)(config.embedding);
+                const [queryEmbedding] = await provider.embed([question]);
+                if (options.hybrid) {
+                    results = await (0, hybrid_1.hybridSearch)(question, queryEmbedding, chunks, cache, symbols, { topK });
+                }
+                else {
+                    results = (0, vector_1.vectorSearch)(queryEmbedding, chunks, cache, symbols, topK);
+                    if (results.length === 0) {
+                        results = (0, bm25_1.computeBM25Scores)(question, chunks, symbols, topK);
+                    }
+                }
+                spinner.succeed("Context retrieved");
+            }
+        }
+        catch (err) {
+            spinner.fail(`Search failed: ${err.message}`);
+            results = (0, bm25_1.computeBM25Scores)(question, chunks, symbols, topK);
+        }
+    }
+    results = (0, tokenizer_1.applyTokenBudget)(results, budget);
+    // ── Build context string ──────────────────────────────────────────────────
+    const contextFormat = config.display?.format === "terse" ? "terse" : "plain";
+    const contextStr = (0, context_1.generateContextString)(config, results, depGraph, callGraph, fileSummaries, projectSummary?.overview ?? null, { query: question, format: contextFormat }, rootDir, chunks, knowledgeEntries);
+    if (options.showContext) {
+        console.log(chalk_1.default.gray("─── Retrieved Context ──────────────────────────"));
+        console.log(chalk_1.default.gray(contextStr));
+        console.log(chalk_1.default.gray("────────────────────────────────────────────────\n"));
+    }
+    // ── Call LLM ──────────────────────────────────────────────────────────────
+    const llmConfig = {
+        ...config.summarization,
+        model: config.summarization.model ?? "gpt-4o-mini",
+    };
+    const llm = (0, factory_2.createLLMProvider)(llmConfig);
+    console.log(chalk_1.default.gray(`\n[${llm.name} · ${llmConfig.model}]\n`));
+    let tokensWritten = 0;
+    try {
+        const response = await llm.chat([
+            {
+                role: "system",
+                content: `${SYSTEM_PROMPT}\n\n${contextStr}`,
+            },
+            { role: "user", content: question },
+        ], {
+            stream: true,
+            onToken: (token) => {
+                process.stdout.write(token);
+                tokensWritten++;
+            },
+        });
+        // Fallback: if provider doesn't support streaming, print the full response.
+        if (tokensWritten === 0 && response.content) {
+            process.stdout.write(response.content);
+        }
+        process.stdout.write("\n");
+        if (response.usage) {
+            console.log(chalk_1.default.gray(`\n[${response.usage.promptTokens} prompt + ${response.usage.completionTokens} completion tokens]`));
+        }
+    }
+    catch (err) {
+        console.error(chalk_1.default.red("\nLLM error:"), err.message);
+        process.exit(1);
+    }
+}
+//# sourceMappingURL=ask.js.map

package/dist/commands/ask.js.map

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package/dist/commands/audit.d.ts

@@ -0,0 +1,17 @@
+export type AuditType = "security" | "performance" | "bugs";
+export interface AuditOptions {
+    /** Audit types to run (default: all three) */
+    types?: AuditType[];
+    /** Only audit files changed since this git ref (e.g. HEAD~5, main) */
+    since?: string;
+    /** Max context tokens per step (default: 5000) */
+    budget?: number;
+    /** Force keyword search */
+    keyword?: boolean;
+    /** Output format */
+    output?: "terminal" | "json" | "markdown";
+    /** Save critical/high findings as knowledge entries */
+    save?: boolean;
+}
+export declare function runAudit(rootDir: string, options?: AuditOptions): Promise<void>;
+//# sourceMappingURL=audit.d.ts.map

package/dist/commands/audit.d.ts.map

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package/dist/commands/audit.js

@@ -0,0 +1,408 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.runAudit = runAudit;
+const chalk_1 = __importDefault(require("chalk"));
+const child_process_1 = require("child_process");
+const ora_1 = __importDefault(require("ora"));
+const config_1 = require("../core/config");
+const factory_1 = require("../llm/factory");
+const bm25_1 = require("../search/bm25");
+const cache_1 = require("../storage/cache");
+const knowledge_1 = require("../storage/knowledge");
+const repository_1 = require("../storage/repository");
+const summaries_1 = require("../storage/summaries");
+const tokenizer_1 = require("../utils/tokenizer");
+const context_1 = require("./context");
+// ─── Checklists ───────────────────────────────────────────────────────────────
+const CHECKLISTS = {
+    security: [
+        "SQL/NoSQL injection: user input concatenated into queries without parameterization",
+        "Command injection: user input passed to exec/spawn/eval",
+        "Path traversal: user input used in file paths without normalization",
+        "XSS: unescaped user input rendered as HTML",
+        "Hardcoded secrets: API keys, passwords, tokens, private keys in source",
+        "Weak cryptography: MD5, SHA1, DES, ECB mode, hardcoded IV/salt",
+        "Missing authentication: endpoints or functions that should verify identity but don't",
+        "Missing authorization: auth checks that don't verify permissions/roles",
+        "Insecure deserialization: eval() or JSON.parse() on untrusted external input",
+        "Sensitive data in logs: passwords, tokens, PII written to logs",
+        "Open redirects: user-controlled URLs used in redirects without allowlist",
+        "CSRF: state-changing operations (POST/PUT/DELETE) without CSRF protection",
+        "Insecure direct object reference: IDs used to fetch resources without ownership check",
+        "Prototype pollution: merging user objects without sanitization",
+    ],
+    performance: [
+        "N+1 queries: database or API calls inside loops",
+        "Missing await: async functions called without await, especially inside loops",
+        "Synchronous I/O: readFileSync/writeFileSync in request handlers or hot paths",
+        "Unbounded data loading: fetching all records without pagination or limits",
+        "Memory accumulation: arrays, maps, or caches that grow without eviction",
+        "Redundant computation: expensive operations (regex, sort, parse) repeated unnecessarily",
+        "Blocking event loop: CPU-intensive synchronous code in async context",
+        "Unnecessary serialization: JSON.stringify/parse in tight loops",
+        "Missing memoization: pure functions called repeatedly with same args",
+        "Large object copies: unnecessary deep clones or full object spreads",
+        "Unindexed lookups: linear search (Array.find, filter) over large collections that could use a Map",
+        "Repeated DOM/tree traversal in loops (if applicable)",
+    ],
+    bugs: [
+        "Null/undefined dereference: accessing properties without null checks",
+        "Unhandled promise rejections: .then() without .catch(), missing try/catch around await",
+        "Missing error handling: no error path in critical operations (network, disk, parse)",
+        "Off-by-one: array indexing with length instead of length-1, loop bounds",
+        "Race conditions: shared mutable state accessed across concurrent async operations",
+        "Type coercion: == instead of ===, implicit conversions causing unexpected behavior",
+        "Infinite loops: while/for loops missing a guaranteed exit condition",
+        "Resource leaks: file handles, sockets, DB connections not closed in error paths",
+        "Dead code: unreachable branches, unused variables that suggest logic errors",
+        "Incorrect error propagation: errors swallowed in catch blocks (empty catch, console.log only)",
+        "Mutating function arguments: modifying caller's objects unexpectedly",
+        "Integer overflow / float precision: arithmetic on large numbers without guards",
+    ],
+};
+// ─── Prompts ──────────────────────────────────────────────────────────────────
+function buildAuditPlannerPrompt(types, fileCount) {
+    const checklistSections = types
+        .map((t) => `### ${t.toUpperCase()}\n${CHECKLISTS[t].map((c) => `- ${c}`).join("\n")}`)
+        .join("\n\n");
+    return (`You are an expert code auditor.\n` +
+        `Create a systematic audit plan covering ALL ${fileCount} listed files.\n\n` +
+        `Audit focus:\n${checklistSections}\n\n` +
+        `Rules:\n` +
+        `- Group 2-5 related files per step (by directory or responsibility).\n` +
+        `- Each step's description must name the specific checklist items to verify.\n` +
+        `- Cover EVERY file — no file may be skipped.\n` +
+        `- Keep steps ≤ 20 total.\n\n` +
+        `Return ONLY valid JSON — no markdown fences, no explanation:\n` +
+        `{ "steps": [{ "id": 1, "files": ["src/path.ts"], "description": "<what to check and why>" }] }`);
+}
+const AUDIT_EXECUTOR_PROMPT = `You are an expert code auditor.\n` +
+    `Analyze the provided code carefully for the issues described.\n\n` +
+    `Return ONLY valid JSON — no markdown, no explanation:\n` +
+    `{ "findings": [{ "severity": "critical|high|medium|low|info", "category": "<issue type>", "file": "<relative path>", "line": <number or null>, "description": "<what the issue is and why it matters>", "recommendation": "<specific fix>" }] }\n\n` +
+    `If no issues found, return: { "findings": [] }\n` +
+    `Severity guide: critical=exploitable/data loss, high=significant risk, medium=should fix, low=minor, info=note.`;
+// ─── Git helpers ──────────────────────────────────────────────────────────────
+function getChangedFiles(since, rootDir) {
+    const result = (0, child_process_1.spawnSync)("git", ["diff", "--name-only", since, "--", "."], { cwd: rootDir, encoding: "utf-8" });
+    if (result.status !== 0 || !result.stdout?.trim())
+        return [];
+    return result.stdout
+        .trim()
+        .split("\n")
+        .filter(Boolean);
+}
+// ─── Finding helpers ──────────────────────────────────────────────────────────
+function parseFindings(raw) {
+    const text = raw.trim();
+    const jsonStr = text.startsWith("```")
+        ? text.replace(/^```(?:json)?\n?/, "").replace(/\n?```$/, "")
+        : text;
+    try {
+        const parsed = JSON.parse(jsonStr);
+        return Array.isArray(parsed.findings) ? parsed.findings : [];
+    }
+    catch {
+        // Fallback: try to find any JSON object in the response
+        const match = jsonStr.match(/\{[\s\S]*\}/);
+        if (match) {
+            try {
+                const parsed = JSON.parse(match[0]);
+                return Array.isArray(parsed.findings) ? parsed.findings : [];
+            }
+            catch {
+                return [];
+            }
+        }
+        return [];
+    }
+}
+function deduplicateFindings(findings) {
+    const seen = new Set();
+    return findings.filter((f) => {
+        const key = `${f.file}:${f.line ?? ""}:${f.category}:${f.description.slice(0, 60)}`;
+        if (seen.has(key))
+            return false;
+        seen.add(key);
+        return true;
+    });
+}
+const SEVERITY_ORDER = {
+    critical: 0,
+    high: 1,
+    medium: 2,
+    low: 3,
+    info: 4,
+};
+function sortFindings(findings) {
+    return [...findings].sort((a, b) => (SEVERITY_ORDER[a.severity] ?? 5) - (SEVERITY_ORDER[b.severity] ?? 5));
+}
+// ─── Report formatters ────────────────────────────────────────────────────────
+const SEVERITY_STYLE = {
+    critical: (s) => chalk_1.default.bgRed.white.bold(s),
+    high: (s) => chalk_1.default.red.bold(s),
+    medium: (s) => chalk_1.default.yellow(s),
+    low: (s) => chalk_1.default.gray(s),
+    info: (s) => chalk_1.default.dim(s),
+};
+function formatTerminal(findings, types, auditedFiles) {
+    const counts = {
+        critical: 0,
+        high: 0,
+        medium: 0,
+        low: 0,
+        info: 0,
+    };
+    for (const f of findings)
+        counts[f.severity] = (counts[f.severity] ?? 0) + 1;
+    const typeLabel = types.join(" + ");
+    console.log(chalk_1.default.bold.cyan(`\n── Audit Report [${typeLabel}] ─────────────────────────────`));
+    console.log(chalk_1.default.gray(`   ${auditedFiles} file(s) analysed · ${findings.length} finding(s)\n`));
+    if (findings.length === 0) {
+        console.log(chalk_1.default.green("  No issues found.\n"));
+    }
+    else {
+        for (const f of findings) {
+            const severityBadge = SEVERITY_STYLE[f.severity](`[${f.severity.toUpperCase()}]`);
+            const location = f.line ? `${f.file}:${f.line}` : f.file;
+            console.log(`${severityBadge} ${chalk_1.default.bold(f.category)}  ${chalk_1.default.gray(location)}`);
+            console.log(`  ${f.description}`);
+            console.log(chalk_1.default.green(`  → ${f.recommendation}`));
+            console.log();
+        }
+    }
+    const summary = ["critical", "high", "medium", "low", "info"]
+        .map((s) => {
+        const n = counts[s];
+        if (n === 0)
+            return null;
+        return SEVERITY_STYLE[s](`${n} ${s}`);
+    })
+        .filter(Boolean)
+        .join(chalk_1.default.gray(" · "));
+    console.log(chalk_1.default.bold.cyan("─────────────────────────────────────────────────────────"));
+    console.log(`  ${summary || chalk_1.default.green("0 issues")}`);
+    console.log();
+}
+function formatMarkdown(findings, types, auditedFiles) {
+    const lines = [
+        `# Audit Report — ${types.join(", ")}`,
+        "",
+        `**Files analysed:** ${auditedFiles}  **Findings:** ${findings.length}`,
+        "",
+    ];
+    if (findings.length === 0) {
+        lines.push("No issues found.");
+        return lines.join("\n");
+    }
+    const bySeverity = {};
+    for (const f of findings) {
+        (bySeverity[f.severity] ??= []).push(f);
+    }
+    for (const sev of ["critical", "high", "medium", "low", "info"]) {
+        const group = bySeverity[sev];
+        if (!group?.length)
+            continue;
+        lines.push(`## ${sev.charAt(0).toUpperCase() + sev.slice(1)} (${group.length})`);
+        lines.push("");
+        for (const f of group) {
+            const loc = f.line ? `\`${f.file}:${f.line}\`` : `\`${f.file}\``;
+            lines.push(`### ${f.category} — ${loc}`);
+            lines.push(`**Issue:** ${f.description}`);
+            lines.push(`**Fix:** ${f.recommendation}`);
+            lines.push("");
+        }
+    }
+    return lines.join("\n");
+}
+// ─── Main command ─────────────────────────────────────────────────────────────
+async function runAudit(rootDir, options = {}) {
+    const config = (0, config_1.loadConfig)(rootDir);
+    if (!config.summarization) {
+        console.error(chalk_1.default.red('No LLM configured. Add a "summarization" block to .vemora/config.json.'));
+        process.exit(1);
+    }
+    const types = options.types ?? ["security", "performance", "bugs"];
+    const budget = options.budget ?? 5000;
+    const plannerConfig = config.planner ?? config.summarization;
+    const executorConfig = config.summarization;
+    const planner = (0, factory_1.createLLMProvider)(plannerConfig);
+    const executor = (0, factory_1.createLLMProvider)(executorConfig);
+    const sameLLM = plannerConfig.provider === executorConfig.provider &&
+        plannerConfig.model === executorConfig.model;
+    console.log(chalk_1.default.bold.cyan("\n[vemora audit]"));
+    console.log(chalk_1.default.gray(`  Types:    ${types.join(", ")}`));
+    console.log(chalk_1.default.gray(`  Planner:  ${planner.name} · ${plannerConfig.model}${sameLLM ? " (also executor)" : ""}`));
+    if (!sameLLM) {
+        console.log(chalk_1.default.gray(`  Executor: ${executor.name} · ${executorConfig.model}`));
+    }
+    // ── Load index data ────────────────────────────────────────────────────────
+    const repo = new repository_1.RepositoryStorage(rootDir);
+    const cacheStorage = new cache_1.EmbeddingCacheStorage(config.projectId);
+    const summaryStorage = new summaries_1.SummaryStorage(rootDir);
+    const chunks = repo.loadChunks();
+    if (chunks.length === 0) {
+        console.error(chalk_1.default.red("No index found. Run `vemora index` first."));
+        process.exit(1);
+    }
+    const symbols = repo.loadSymbols();
+    const depGraph = repo.loadDeps();
+    const callGraph = repo.loadCallGraph();
+    const fileSummaries = summaryStorage.hasFileSummaries()
+        ? summaryStorage.loadFileSummaries()
+        : {};
+    const projectOverview = summaryStorage.loadProjectSummary()?.overview ?? null;
+    const knowledgeEntries = new knowledge_1.KnowledgeStorage(rootDir).load();
+    // ── Determine file scope ───────────────────────────────────────────────────
+    let targetFiles = Object.keys(Object.keys(fileSummaries).length > 0
+        ? fileSummaries
+        : repo.loadFiles());
+    if (options.since) {
+        const changed = getChangedFiles(options.since, rootDir);
+        if (changed.length === 0) {
+            console.log(chalk_1.default.yellow(`  No changed files since ${options.since}.`));
+            return;
+        }
+        // Keep only indexed files that appear in the diff
+        const changedSet = new Set(changed);
+        targetFiles = targetFiles.filter((f) => changedSet.has(f));
+        if (targetFiles.length === 0) {
+            console.log(chalk_1.default.yellow("  No indexed files in the diff — nothing to audit."));
+            return;
+        }
+        console.log(chalk_1.default.gray(`  Scope:    ${changed.length} changed file(s) since ${options.since}`));
+    }
+    console.log(chalk_1.default.gray(`  Files:    ${targetFiles.length}`));
+    console.log();
+    // ── Build planner context (summaries + file list, no raw code) ─────────────
+    const fileListSection = targetFiles
+        .map((f) => {
+        const summary = fileSummaries[f]?.summary;
+        return summary ? `${f} — ${summary}` : f;
+    })
+        .join("\n");
+    const plannerContext = `# Project: ${config.projectName}\n\n` +
+        (projectOverview ? `## Overview\n${projectOverview}\n\n` : "") +
+        `## Files to audit (${targetFiles.length})\n${fileListSection}`;
+    // ── Phase 1: generate audit plan ───────────────────────────────────────────
+    const planSpinner = (0, ora_1.default)("Generating audit plan...").start();
+    let steps = [];
+    try {
+        const plannerResponse = await planner.chat([
+            {
+                role: "system",
+                content: buildAuditPlannerPrompt(types, targetFiles.length),
+            },
+            {
+                role: "user",
+                content: `Generate the audit plan for this project:\n\n${plannerContext}`,
+            },
+        ], { model: plannerConfig.model, temperature: 0.1 });
+        const raw = plannerResponse.content.trim();
+        const jsonStr = raw.startsWith("```")
+            ? raw.replace(/^```(?:json)?\n?/, "").replace(/\n?```$/, "")
+            : raw;
+        const plan = JSON.parse(jsonStr);
+        steps = plan.steps ?? [];
+        if (steps.length === 0)
+            throw new Error("Plan has no steps");
+        planSpinner.succeed(`Audit plan ready — ${steps.length} step${steps.length !== 1 ? "s" : ""}`);
+    }
+    catch (err) {
+        planSpinner.fail(`Planning failed: ${err.message}`);
+        process.exit(1);
+    }
+    // ── Phase 2: execute steps in parallel waves of 3 ─────────────────────────
+    const allFindings = [];
+    const contextCache = new Map();
+    const WAVE_SIZE = 3;
+    for (let i = 0; i < steps.length; i += WAVE_SIZE) {
+        const wave = steps.slice(i, i + WAVE_SIZE);
+        const waveLabel = `[${i + 1}-${Math.min(i + WAVE_SIZE, steps.length)}/${steps.length}]`;
+        const waveSpinner = (0, ora_1.default)(`${waveLabel} ${wave.map((s) => s.description.slice(0, 40)).join(" | ")}...`).start();
+        const waveResults = await Promise.all(wave.map(async (step) => {
+            // Context retrieval with deduplication
+            const cacheKey = JSON.stringify([...step.files].sort());
+            let contextStr = contextCache.get(cacheKey);
+            if (!contextStr) {
+                // Targeted retrieval: pull chunks for these exact files
+                const fileSet = new Set(step.files);
+                let results = chunks
+                    .filter((c) => fileSet.has(c.file))
+                    .map((chunk) => ({
+                    chunk,
+                    score: 1,
+                    symbol: chunk.symbol ? symbols[chunk.symbol] : undefined,
+                }));
+                // Fallback to keyword search if targeted retrieval is empty
+                if (results.length === 0) {
+                    results = (0, bm25_1.computeBM25Scores)(step.description, chunks, symbols, 10);
+                }
+                results = (0, tokenizer_1.applyTokenBudget)(results, budget);
+                contextStr = (0, context_1.generateContextString)(config, results, depGraph, callGraph, fileSummaries, projectOverview, { query: step.description, format: "plain" }, rootDir, chunks, knowledgeEntries);
+                contextCache.set(cacheKey, contextStr);
+            }
+            try {
+                const response = await executor.chat([
+                    {
+                        role: "system",
+                        content: `${AUDIT_EXECUTOR_PROMPT}\n\n${contextStr}`,
+                    },
+                    {
+                        role: "user",
+                        content: `Audit these files: ${step.files.join(", ")}\n\n` +
+                            `Focus on: ${step.description}`,
+                    },
+                ], { model: executorConfig.model, temperature: 0.1 });
+                return parseFindings(response.content);
+            }
+            catch {
+                return [];
+            }
+        }));
+        for (const findings of waveResults) {
+            allFindings.push(...findings);
+        }
+        const waveCount = waveResults.flat().length;
+        waveSpinner.succeed(`${waveLabel} done — ${waveCount} finding${waveCount !== 1 ? "s" : ""}`);
+    }
+    // ── Phase 3: aggregate, deduplicate, sort ─────────────────────────────────
+    const finalFindings = sortFindings(deduplicateFindings(allFindings));
+    // ── Phase 4: output ────────────────────────────────────────────────────────
+    const outputFormat = options.output ?? "terminal";
+    if (outputFormat === "json") {
+        console.log(JSON.stringify({ findings: finalFindings }, null, 2));
+    }
+    else if (outputFormat === "markdown") {
+        console.log(formatMarkdown(finalFindings, types, targetFiles.length));
+    }
+    else {
+        formatTerminal(finalFindings, types, targetFiles.length);
+    }
+    // ── Phase 5: optionally save critical/high findings as knowledge ───────────
+    if (options.save) {
+        const important = finalFindings.filter((f) => f.severity === "critical" || f.severity === "high");
+        if (important.length > 0) {
+            const knowledge = new knowledge_1.KnowledgeStorage(rootDir);
+            const entries = knowledge.load();
+            for (const f of important) {
+                entries.push({
+                    id: Math.random().toString(36).slice(2),
+                    category: "gotcha",
+                    title: `[${f.severity.toUpperCase()}] ${f.category} — ${f.file}`,
+                    body: `${f.description}\n\nRecommendation: ${f.recommendation}`,
+                    relatedFiles: [f.file],
+                    createdAt: new Date().toISOString(),
+                    createdBy: `llm:${executorConfig.model}`,
+                    confidence: f.severity === "critical" ? "high" : "medium",
+                });
+            }
+            knowledge.save(entries);
+            console.log(chalk_1.default.green(`  ${important.length} critical/high finding(s) saved to knowledge store.`));
+        }
+    }
+}
+//# sourceMappingURL=audit.js.map

package/dist/commands/audit.js.map

@@ -0,0 +1 @@
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package/dist/commands/brief.d.ts

@@ -0,0 +1,14 @@
+export interface BriefOptions {
+    /** Include all knowledge entries, not only high-confidence ones. */
+    all?: boolean;
+}
+/**
+ * Prints a compact session primer (~L0 + L1 in mempalace terms):
+ *   - Project overview (from vemora summarize)
+ *   - High-confidence knowledge entries
+ *
+ * Designed to be run at the start of an LLM session to re-establish context
+ * without loading the full index. Optimised for minimal token use.
+ */
+export declare function runBrief(rootDir: string, options?: BriefOptions): Promise<void>;
+//# sourceMappingURL=brief.d.ts.map

package/dist/commands/brief.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"brief.d.ts","sourceRoot":"","sources":["../../src/commands/brief.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,YAAY;IAC3B,oEAAoE;IACpE,GAAG,CAAC,EAAE,OAAO,CAAC;CACf;AAED;;;;;;;GAOG;AACH,wBAAsB,QAAQ,CAC5B,OAAO,EAAE,MAAM,EACf,OAAO,GAAE,YAAiB,GACzB,OAAO,CAAC,IAAI,CAAC,CAmEf"}