vectra 0.12.2 → 0.12.3

package/lib/LocalIndex.js

@@ -0,0 +1,515 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.LocalIndex = void 0;
+const fs = __importStar(require("fs/promises"));
+const path = __importStar(require("path"));
+const uuid_1 = require("uuid");
+const ItemSelector_1 = require("./ItemSelector");
+const LocalDocument_1 = require("./LocalDocument");
+const wink_bm25_text_search_1 = __importDefault(require("wink-bm25-text-search"));
+const wink_nlp_1 = __importDefault(require("wink-nlp"));
+const wink_eng_lite_web_model_1 = __importDefault(require("wink-eng-lite-web-model"));
+/**
+ * Local vector index instance.
+ * @remarks
+ * This class is used to create, update, and query a local vector index.
+ * Each index is a folder on disk containing an index.json file and an optional set of metadata files.
+ */
+class LocalIndex {
+    /**
+     * Creates a new instance of LocalIndex.
+     * @param folderPath Path to the index folder.
+     * @param indexName Optional name of the index file. Defaults to index.json.
+     */
+    constructor(folderPath, indexName) {
+        this._folderPath = folderPath;
+        this._indexName = indexName || "index.json";
+    }
+    /**
+     * Path to the index folder.
+     */
+    get folderPath() {
+        return this._folderPath;
+    }
+    /**
+     * Optional name of the index file.
+     */
+    get indexName() {
+        return this._indexName;
+    }
+    /**
+     * Begins an update to the index.
+     * @remarks
+     * This method loads the index into memory and prepares it for updates.
+     */
+    beginUpdate() {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._update) {
+                throw new Error('Update already in progress');
+            }
+            yield this.loadIndexData();
+            this._update = structuredClone(this._data);
+        });
+    }
+    /**
+     * Cancels an update to the index.
+     * @remarks
+     * This method discards any changes made to the index since the update began.
+     */
+    cancelUpdate() {
+        this._update = undefined;
+    }
+    /**
+     * Creates a new index.
+     * @remarks
+     * This method creates a new folder on disk containing an index.json file.
+     * @param config Index configuration.
+     */
+    createIndex() {
+        return __awaiter(this, arguments, void 0, function* (config = { version: 1 }) {
+            var _a;
+            // Delete if exists
+            if (yield this.isIndexCreated()) {
+                if (config.deleteIfExists) {
+                    yield this.deleteIndex();
+                }
+                else {
+                    throw new Error('Index already exists');
+                }
+            }
+            try {
+                // Create folder for index
+                yield fs.mkdir(this._folderPath, { recursive: true });
+                // Initialize index.json file
+                this._data = {
+                    version: config.version,
+                    metadata_config: (_a = config.metadata_config) !== null && _a !== void 0 ? _a : {},
+                    items: []
+                };
+                yield fs.writeFile(path.join(this._folderPath, this._indexName), JSON.stringify(this._data));
+            }
+            catch (err) {
+                yield this.deleteIndex();
+                throw new Error('Error creating index');
+            }
+        });
+    }
+    /**
+     * Deletes the index.
+     * @remarks
+     * This method deletes the index folder from disk.
+     */
+    deleteIndex() {
+        this._data = undefined;
+        return fs.rm(this._folderPath, {
+            recursive: true,
+            maxRetries: 3
+        });
+    }
+    /**
+     * Deletes an item from the index.
+     * @param id ID of item to delete.
+     */
+    deleteItem(id) {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._update) {
+                const index = this._update.items.findIndex(i => i.id === id);
+                if (index >= 0) {
+                    this._update.items.splice(index, 1);
+                }
+            }
+            else {
+                yield this.beginUpdate();
+                const index = this._update.items.findIndex(i => i.id === id);
+                if (index >= 0) {
+                    this._update.items.splice(index, 1);
+                }
+                yield this.endUpdate();
+            }
+        });
+    }
+    /**
+     * Ends an update to the index.
+     * @remarks
+     * This method saves the index to disk.
+     */
+    endUpdate() {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (!this._update) {
+                throw new Error('No update in progress');
+            }
+            try {
+                // Save index
+                yield fs.writeFile(path.join(this._folderPath, this._indexName), JSON.stringify(this._update));
+                this._data = this._update;
+                this._update = undefined;
+            }
+            catch (err) {
+                throw new Error(`Error saving index: ${err.toString()}`);
+            }
+        });
+    }
+    /**
+     * Loads an index from disk and returns its stats.
+     * @returns Index stats.
+     */
+    getIndexStats() {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.loadIndexData();
+            return {
+                version: this._data.version,
+                metadata_config: this._data.metadata_config,
+                items: this._data.items.length
+            };
+        });
+    }
+    /**
+     * Returns an item from the index given its ID.
+     * @param id ID of the item to retrieve.
+     * @returns Item or undefined if not found.
+     */
+    getItem(id) {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.loadIndexData();
+            return this._data.items.find(i => i.id === id);
+        });
+    }
+    /**
+     * Adds an item to the index.
+     * @remarks
+     * A new update is started if one is not already in progress. If an item with the same ID
+     * already exists, an error will be thrown.
+     * @param item Item to insert.
+     * @returns Inserted item.
+     */
+    insertItem(item) {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._update) {
+                return yield this.addItemToUpdate(item, true);
+            }
+            else {
+                yield this.beginUpdate();
+                const newItem = yield this.addItemToUpdate(item, true);
+                yield this.endUpdate();
+                return newItem;
+            }
+        });
+    }
+    /**
+     * Adds a batch of items to the index.
+     * @remarks
+     * Batch update requires no update to be in progress. This is necessary so that if any one
+     * insert operation fails, the entire update can be safely cancelled. This prevents partial
+     * updates from being applied to the local index.
+     * @param items Items to insert.
+     * @returns Inserted items.
+     */
+    batchInsertItems(items) {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.beginUpdate();
+            try {
+                const newItems = [];
+                for (const item of items) {
+                    const newItem = yield this.addItemToUpdate(item, true);
+                    newItems.push(newItem);
+                }
+                yield this.endUpdate();
+                return newItems;
+            }
+            catch (e) {
+                // cancels this update to prevent partial batch updates. allows error to bubble up.
+                yield this.cancelUpdate();
+                throw e;
+            }
+        });
+    }
+    /**
+     * Returns true if the index exists.
+     */
+    isIndexCreated() {
+        return __awaiter(this, void 0, void 0, function* () {
+            try {
+                yield fs.access(path.join(this._folderPath, this.indexName));
+                return true;
+            }
+            catch (err) {
+                return false;
+            }
+        });
+    }
+    /**
+     * Returns all items in the index.
+     * @remarks
+     * This method loads the index into memory and returns all its items. A copy of the items
+     * array is returned so no modifications should be made to the array.
+     * @returns Array of all items in the index.
+     */
+    listItems() {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.loadIndexData();
+            return this._data.items.slice();
+        });
+    }
+    /**
+     * Returns all items in the index matching the filter.
+     * @remarks
+     * This method loads the index into memory and returns all its items matching the filter.
+     * @param filter Filter to apply.
+     * @returns Array of items matching the filter.
+     */
+    listItemsByMetadata(filter) {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.loadIndexData();
+            return this._data.items.filter(i => ItemSelector_1.ItemSelector.select(i.metadata, filter));
+        });
+    }
+    /**
+     * Finds the top k items in the index that are most similar to the vector.
+     * @remarks
+     * This method loads the index into memory and returns the top k items that are most similar.
+     * An optional filter can be applied to the metadata of the items.
+     * @param vector Vector to query against.
+     * @param query Query text used for BM25 keyword search.
+     * @param topK Number of items to return.
+     * @param filter Optional. Filter to apply.
+     * @returns Similar items to the vector that matche the supplied filter.
+     */
+    queryItems(vector, query, topK, filter, isBm25) {
+        return __awaiter(this, void 0, void 0, function* () {
+            yield this.loadIndexData();
+            // Filter items
+            let items = this._data.items;
+            if (filter) {
+                items = items.filter(i => ItemSelector_1.ItemSelector.select(i.metadata, filter));
+            }
+            // Calculate distances
+            const norm = ItemSelector_1.ItemSelector.normalize(vector);
+            const distances = [];
+            for (let i = 0; i < items.length; i++) {
+                const item = items[i];
+                const distance = ItemSelector_1.ItemSelector.normalizedCosineSimilarity(vector, norm, item.vector, item.norm);
+                distances.push({ index: i, distance: distance });
+            }
+            // Sort by distance DESCENDING
+            distances.sort((a, b) => b.distance - a.distance);
+            // Find top k
+            const top = distances.slice(0, topK).map(d => {
+                return {
+                    item: Object.assign({}, items[d.index]),
+                    score: d.distance
+                };
+            });
+            // Load external metadata
+            for (const item of top) {
+                if (item.item.metadataFile) {
+                    const metadataPath = path.join(this._folderPath, item.item.metadataFile);
+                    const metadata = yield fs.readFile(metadataPath);
+                    item.item.metadata = JSON.parse(metadata.toString());
+                }
+            }
+            //Peform bm25 search only if enabled. Avoid duplicate chunks, which are already selected during semantic search.
+            if (isBm25) {
+                const itemSet = new Set();
+                for (const item of top)
+                    itemSet.add(item.item.id);
+                this.setupbm25();
+                let currDoc;
+                let currDocTxt;
+                for (let i = 0; i < items.length; i++) {
+                    if (!itemSet.has(items[i].id)) {
+                        const item = items[i];
+                        currDoc = new LocalDocument_1.LocalDocument(this, item.metadata.documentId.toString(), '');
+                        currDocTxt = yield currDoc.loadText();
+                        const startPos = item.metadata.startPos;
+                        const endPos = item.metadata.endPos;
+                        const chunkText = currDocTxt.substring(Number(startPos), Number(endPos) + 1);
+                        this._bm25Engine.addDoc({ body: chunkText }, i);
+                    }
+                }
+                this._bm25Engine.consolidate();
+                var results = yield this.bm25Search(query, items, topK);
+                results.forEach((res) => {
+                    top.push({
+                        item: Object.assign({}, Object.assign(Object.assign({}, items[res[0]]), { metadata: Object.assign(Object.assign({}, items[res[0]].metadata), { isBm25: true }) })),
+                        score: res[1]
+                    });
+                });
+            }
+            return top;
+        });
+    }
+    /**
+     * Adds or replaces an item in the index.
+     * @remarks
+     * A new update is started if one is not already in progress. If an item with the same ID
+     * already exists, it will be replaced.
+     * @param item Item to insert or replace.
+     * @returns Upserted item.
+     */
+    upsertItem(item) {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._update) {
+                return yield this.addItemToUpdate(item, false);
+            }
+            else {
+                yield this.beginUpdate();
+                const newItem = yield this.addItemToUpdate(item, false);
+                yield this.endUpdate();
+                return newItem;
+            }
+        });
+    }
+    /**
+     * Ensures that the index has been loaded into memory.
+     */
+    loadIndexData() {
+        return __awaiter(this, void 0, void 0, function* () {
+            if (this._data) {
+                return;
+            }
+            if (!(yield this.isIndexCreated())) {
+                throw new Error('Index does not exist');
+            }
+            const data = yield fs.readFile(path.join(this._folderPath, this.indexName));
+            this._data = JSON.parse(data.toString());
+        });
+    }
+    addItemToUpdate(item, unique) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var _a;
+            // Ensure vector is provided
+            if (!item.vector) {
+                throw new Error('Vector is required');
+            }
+            // Ensure unique
+            const id = (_a = item.id) !== null && _a !== void 0 ? _a : (0, uuid_1.v4)();
+            if (unique) {
+                const existing = this._update.items.find(i => i.id === id);
+                if (existing) {
+                    throw new Error(`Item with id ${id} already exists`);
+                }
+            }
+            // Check for indexed metadata
+            let metadata = {};
+            let metadataFile;
+            if (this._update.metadata_config.indexed && this._update.metadata_config.indexed.length > 0 && item.metadata) {
+                // Copy only indexed metadata
+                for (const key of this._update.metadata_config.indexed) {
+                    if (item.metadata && item.metadata[key]) {
+                        metadata[key] = item.metadata[key];
+                    }
+                }
+                // Save remaining metadata to disk
+                metadataFile = `${(0, uuid_1.v4)()}.json`;
+                const metadataPath = path.join(this._folderPath, metadataFile);
+                yield fs.writeFile(metadataPath, JSON.stringify(item.metadata));
+            }
+            else if (item.metadata) {
+                metadata = item.metadata;
+            }
+            // Create new item
+            const newItem = {
+                id: id,
+                metadata: metadata,
+                vector: item.vector,
+                norm: ItemSelector_1.ItemSelector.normalize(item.vector)
+            };
+            if (metadataFile) {
+                newItem.metadataFile = metadataFile;
+            }
+            // Add item to index
+            if (!unique) {
+                const existing = this._update.items.find(i => i.id === id);
+                if (existing) {
+                    existing.metadata = newItem.metadata;
+                    existing.vector = newItem.vector;
+                    existing.metadataFile = newItem.metadataFile;
+                    return existing;
+                }
+                else {
+                    this._update.items.push(newItem);
+                    return newItem;
+                }
+            }
+            else {
+                this._update.items.push(newItem);
+                return newItem;
+            }
+        });
+    }
+    setupbm25() {
+        return __awaiter(this, void 0, void 0, function* () {
+            this._bm25Engine = (0, wink_bm25_text_search_1.default)();
+            const nlp = (0, wink_nlp_1.default)(wink_eng_lite_web_model_1.default);
+            const its = nlp.its;
+            const prepTask = function (text) {
+                const tokens = [];
+                nlp.readDoc(text)
+                    .tokens()
+                    // Use only words ignoring punctuations etc and from them remove stop words
+                    .filter((t) => (t.out(its.type) === 'word' && !t.out(its.stopWordFlag)))
+                    // Handle negation and extract stem of the word
+                    .each((t) => tokens.push((t.out(its.negationFlag)) ? '!' + t.out(its.stem) : t.out(its.stem)));
+                return tokens;
+            };
+            this._bm25Engine.defineConfig({ fldWeights: { body: 1 } });
+            // Step II: Define PrepTasks pipe.
+            this._bm25Engine.definePrepTasks([prepTask]);
+        });
+    }
+    bm25Search(searchQuery, items, topK) {
+        return __awaiter(this, void 0, void 0, function* () {
+            var query = searchQuery;
+            // `results` is an array of [ doc-id, score ], sorted by score
+            var results = this._bm25Engine.search(query);
+            return results.slice(0, topK);
+        });
+    }
+}
+exports.LocalIndex = LocalIndex;
+//# sourceMappingURL=LocalIndex.js.map

package/lib/LocalIndex.js.map

@@ -0,0 +1 @@
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package/lib/LocalIndex.spec.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=LocalIndex.spec.d.ts.map