varri-js 1.0.0

package/dist/vaRRI.min.js

@@ -0,0 +1,5 @@
+(function(wt){"use strict";const St="rri_linear",xt="structure_linear";let L=null,N=null,k=null,q=null;const y={sequence1:"lightblue",sequence2:"#F4BB44",seq1profileColor:"purple",seq2profileColor:"red",mutationColor:"Darkgreen",intermolecularHighlight:"red",backgroundHighlight:"red",subsequenceHighlight:"purple",basepair:"red"},S={items:[],nextId:1,label:"Highlight"},x={items:[],nextId:1,label:"Region highlight"},E={items:[],nextId:1,label:"Mutation"},Nn=S.items,kn=x.items,$n=E.items;function V(e){e.items.length=0,e.nextId=1}function K(e,t){const r=e.items.find(n=>n.id===t);if(!r)throw new Error(e.label+" with id "+t+" not found.");return r}function W(e,t){return e.items.map(t)}function Q(e,t,r){return t.id=e.nextId++,e.items.push(t),r(t)}function J(e,t){const r=e.items.findIndex(n=>n.id===t);return r===-1?!1:(e.items.splice(r,1),!0)}function Z(e){return{id:e.id,sequence:e.sequence,range:e.range.map(([t,r])=>[t,r]),color:e.color,alpha:e.alpha,rangeText:e.rangeText}}function Et(e){const t=String(e);if(t!=="1"&&t!=="2")throw new Error('Highlight sequence must be "1" or "2".');return t}function Rt(e,t){if(typeof e=="string"){const n=v(e,t?t.offset:void 0,t?t.length:void 0,t?t.id:void 0);if(!n||n.length===0)throw new Error("Highlight range must not be empty.");return{range:n,rangeText:e.trim()}}if(!Array.isArray(e)||e.length===0)throw new Error("Highlight range must not be empty.");const r=e.map((n,o)=>{if(!Array.isArray(n)||n.length!==2)throw new Error(`${t.id?t.id+": ":""} Invalid subsequence range ${n} at index ${o}. 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