usearch 2.8.6 → 2.8.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CITATION.cff +1 -1
- package/CMakeLists.txt +3 -3
- package/CONTRIBUTING.md +3 -3
- package/Cargo.toml +1 -1
- package/Dockerfile +16 -0
- package/README.md +41 -38
- package/VERSION +1 -0
- package/binding.gyp +57 -8
- package/conanfile.py +1 -1
- package/include/usearch/index.hpp +1 -1
- package/include/usearch/index_plugins.hpp +27 -23
- package/package.json +4 -3
- package/setup.py +76 -15
- package/wasmer.toml +1 -1
- package/. npmignore +0 -14
- package/.gitignore +0 -95
- package/.vscode/launch.json +0 -181
- package/.vscode/settings.json +0 -180
- package/.vscode/tasks.json +0 -71
- package/Package.swift +0 -41
- package/csharp/.editorconfig +0 -361
- package/csharp/Cloud.Unum.USearch.sln +0 -34
- package/csharp/DEV_SETUP.md +0 -51
- package/csharp/Directory.Build.props +0 -29
- package/csharp/README.md +0 -74
- package/csharp/build_and_test.cmd +0 -31
- package/csharp/build_and_test.sh +0 -30
- package/csharp/nuget/nuget-package.props +0 -33
- package/csharp/pack.sh +0 -56
- package/csharp/src/Cloud.Unum.USearch.Tests/Cloud.Unum.USearch.Tests.csproj +0 -39
- package/csharp/src/Cloud.Unum.USearch.Tests/USearchIndexTests.cs +0 -1013
- package/csharp/src/Cloud.Unum.USearch.Tests/Usings.cs +0 -1
- package/docs/_static/custom.css +0 -26
- package/docs/_static/custom.js +0 -7
- package/docs/benchmarks.md +0 -245
- package/docs/benchmarks.rst +0 -5
- package/docs/c/index.rst +0 -11
- package/docs/c/reference.rst +0 -7
- package/docs/conf.dox +0 -2668
- package/docs/conf.py +0 -53
- package/docs/contributing.rst +0 -5
- package/docs/cpp/index.rst +0 -11
- package/docs/cpp/reference.rst +0 -17
- package/docs/csharp/index.rst +0 -6
- package/docs/format.md +0 -86
- package/docs/format.rst +0 -5
- package/docs/golang/index.rst +0 -6
- package/docs/index.rst +0 -33
- package/docs/java/index.rst +0 -11
- package/docs/java/reference.rst +0 -7
- package/docs/javascript/index.rst +0 -11
- package/docs/javascript/reference.rst +0 -12
- package/docs/python/index.rst +0 -11
- package/docs/python/reference.rst +0 -42
- package/docs/rust/index.rst +0 -6
- package/docs/swift/index.rst +0 -6
- package/docs/wolfram/index.rst +0 -6
- package/golang/README.md +0 -95
- package/golang/go.mod +0 -3
- package/golang/lib.go +0 -379
- package/golang/lib_test.go +0 -108
- package/java/README.md +0 -22
- package/java/cloud/unum/usearch/Index.java +0 -337
- package/java/cloud/unum/usearch/cloud_unum_usearch_Index.cpp +0 -197
- package/java/cloud/unum/usearch/cloud_unum_usearch_Index.h +0 -125
- package/java/test/IndexTest.java +0 -30
- package/objc/USearchObjective.mm +0 -299
- package/objc/include/USearchObjective.h +0 -154
- package/python/README.md +0 -292
- package/python/lib.cpp +0 -1216
- package/python/scripts/bench.ipynb +0 -193
- package/python/scripts/bench.py +0 -137
- package/python/scripts/bench_exact.py +0 -44
- package/python/scripts/cluster.ipynb +0 -160
- package/python/scripts/index_faiss.py +0 -100
- package/python/scripts/join.py +0 -155
- package/python/scripts/test_index.py +0 -247
- package/python/scripts/test_jit.py +0 -231
- package/python/scripts/test_sparse.py +0 -32
- package/python/scripts/test_tooling.py +0 -133
- package/python/usearch/__init__.py +0 -0
- package/python/usearch/client.py +0 -124
- package/python/usearch/eval.py +0 -470
- package/python/usearch/index.py +0 -1401
- package/python/usearch/io.py +0 -113
- package/python/usearch/numba.py +0 -121
- package/python/usearch/server.py +0 -137
- package/rust/README.md +0 -66
- package/rust/lib.cpp +0 -136
- package/rust/lib.hpp +0 -69
- package/rust/lib.rs +0 -610
- package/swift/Index+Sugar.swift +0 -153
- package/swift/README.md +0 -48
- package/swift/Test.swift +0 -37
- package/swift/USearch.swift +0 -8
- package/wasm/CMakeLists.txt +0 -7
- package/wasm/README.md +0 -13
- package/wasm/lib.cpp +0 -5
- package/wolfram/CMakeLists.txt +0 -18
- package/wolfram/README.md +0 -13
- package/wolfram/lib.cpp +0 -160
- package/wolfram/test.wls +0 -27
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const github_logo = `<a style="text-decoration:none;" class="Header-link" href="https://github.com/unum-cloud/usearch/" data-hotkey="g d" aria-label="Homepage " data-turbo="false" data-analytics-event="{"category":"Header","action":"go to dashboard","label":"icon:logo"}">
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<svg style="fill: var(--color-foreground-primary);" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 16 16" width="16" height="16"><path fill-rule="evenodd" d="M8 0C3.58 0 0 3.58 0 8c0 3.54 2.29 6.53 5.47 7.59.4.07.55-.17.55-.38 0-.19-.01-.82-.01-1.49-2.01.37-2.53-.49-2.69-.94-.09-.23-.48-.94-.82-1.13-.28-.15-.68-.52-.01-.53.63-.01 1.08.58 1.23.82.72 1.21 1.87.87 2.33.66.07-.52.28-.87.51-1.07-1.78-.2-3.64-.89-3.64-3.95 0-.87.31-1.59.82-2.15-.08-.2-.36-1.02.08-2.12 0 0 .67-.21 2.2.82.64-.18 1.32-.27 2-.27.68 0 1.36.09 2 .27 1.53-1.04 2.2-.82 2.2-.82.44 1.1.16 1.92.08 2.12.51.56.82 1.27.82 2.15 0 3.07-1.87 3.75-3.65 3.95.29.25.54.73.54 1.48 0 1.07-.01 1.93-.01 2.2 0 .21.15.46.55.38A8.013 8.013 0 0016 8c0-4.42-3.58-8-8-8z"></path></svg>
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</a>`
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$(".sidebar-brand-text").html("Unum · USearch<br/> <span style='font-size:0.8em'>$(VERSION)</span>" + github_logo)
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})
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# Benchmarking USearch
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## Hyper-parameters
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All major HNSW implementation share an identical list of hyper-parameters:
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- connectivity (often called `M`),
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- expansion on additions (often called `efConstruction`),
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- expansion on search (often called `ef`).
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The default values vary drastically.
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| Library | Connectivity | EF @ A | EF @ S |
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| :-------: | :----------: | :----: | :----: |
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| `hnswlib` | 16 | 200 | 10 |
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| `FAISS` | 32 | 40 | 16 |
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| `USearch` | 16 | 128 | 64 |
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Below are the performance numbers for a benchmark running on the 64 cores of AWS `c7g.metal` "Graviton 3"-based instances.
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The main columns are:
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- __Add__: Number of insertion Queries Per Second.
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- __Search__: Number search Queries Per Second.
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- __Recall @1__: How often does approximate search yield the exact best match?
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### Different "connectivity"
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| Vectors | Connectivity | EF @ A | EF @ S | __Add__, QPS | __Search__, QPS | __Recall @1__ |
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| :--------- | :----------: | :----: | :----: | :----------: | :-------------: | ------------: |
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| `f32` x256 | 16 | 128 | 64 | 75'640 | 131'654 | 99.3% |
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| `f32` x256 | 12 | 128 | 64 | 81'747 | 149'728 | 99.0% |
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| `f32` x256 | 32 | 128 | 64 | 64'368 | 104'050 | 99.4% |
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### Different "expansion factors"
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| Vectors | Connectivity | EF @ A | EF @ S | __Add__, QPS | __Search__, QPS | __Recall @1__ |
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| :--------- | :----------: | :----: | :----: | :----------: | :-------------: | ------------: |
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| `f32` x256 | 16 | 128 | 64 | 75'640 | 131'654 | 99.3% |
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| `f32` x256 | 16 | 64 | 32 | 128'644 | 228'422 | 97.2% |
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| `f32` x256 | 16 | 256 | 128 | 39'981 | 69'065 | 99.2% |
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### Different vectors "quantization"
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| Vectors | Connectivity | EF @ A | EF @ S | __Add__, QPS | __Search__, QPS | __Recall @1__ |
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| :----------- | :----------: | :----: | :----: | :----------: | :-------------: | ------------: |
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| `f32` x256 | 16 | 128 | 64 | 87'995 | 171'856 | 99.1% |
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| `f16` x256 | 16 | 128 | 64 | 87'270 | 153'788 | 98.4% |
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| `f16` x256 ✳️ | 16 | 128 | 64 | 71'454 | 132'673 | 98.4% |
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| `i8` x256 | 16 | 128 | 64 | 115'923 | 274'653 | 98.9% |
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As seen on the chart, for `f16` quantization, performance may differ depending on native hardware support for that numeric type.
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Also worth noting, 8-bit quantization results in almost no quantization loss and may perform better than `f16`.
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## Utilities
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Within this repository you will find two commonly used utilities:
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- `cpp/bench.cpp` the produces the `bench` binary for broad USearch benchmarks.
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- `python/bench.py` and `python/bench.ipynb` for interactive charts against FAISS.
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To achieve best highest results we suggest compiling locally for the target architecture.
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```sh
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cmake -B ./build_release \
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-DCMAKE_BUILD_TYPE=Release \
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-DUSEARCH_USE_OPENMP=1 \
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-DUSEARCH_USE_JEMALLOC=1 && \
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make -C ./build_release -j
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./build_release/bench --help
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```
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Which would print the following instructions.
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```txt
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SYNOPSIS
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./build_release/bench [--vectors <path>] [--queries <path>] [--neighbors <path>] [-b] [-j
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<integer>] [-c <integer>] [--expansion-add <integer>]
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[--expansion-search <integer>] [--native|--f16quant|--i8quant]
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[--ip|--l2sq|--cos|--haversine] [-h]
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OPTIONS
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--vectors <path>
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.fbin file path to construct the index
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--queries <path>
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.fbin file path to query the index
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--neighbors <path>
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.ibin file path with ground truth
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-b, --big Will switch to uint40_t for neighbors lists with over 4B entries
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-j, --threads <integer>
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Uses all available cores by default
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-c, --connectivity <integer>
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Index granularity
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--expansion-add <integer>
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--native Use raw templates instead of type-punned classes
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--f16quant Enable `f16_t` quantization
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--i8quant Enable `int8_t` quantization
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--ip Choose Inner Product metric
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--l2sq Choose L2 Euclidean metric
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--cos Choose Angular metric
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--haversine Choose Haversine metric
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-h, --help Print this help information on this tool and exit
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```
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Here is an example of running the C++ benchmark:
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```sh
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./build_release/bench \
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--vectors datasets/wiki_1M/base.1M.fbin \
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--queries datasets/wiki_1M/query.public.100K.fbin \
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--neighbors datasets/wiki_1M/groundtruth.public.100K.ibin
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./build_release/bench \
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--vectors datasets/t2i_1B/base.1B.fbin \
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--queries datasets/t2i_1B/query.public.100K.fbin \
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--neighbors datasets/t2i_1B/groundtruth.public.100K.ibin \
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--output datasets/t2i_1B/index.usearch \
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--cos
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```
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> Optional parameters include `connectivity`, `expansion_add`, `expansion_search`.
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For Python, jut open the Jupyter Notebook and start playing around.
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## Datasets
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BigANN benchmark is a good starting point, if you are searching for large collections of high-dimensional vectors.
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Those often come with precomputed ground-truth neighbors, which is handy for recall evaluation.
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| Dataset | Scalar Type | Dimensions | Metric | Size |
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| [Unum UForm Creative Captions][unum-cc-3m] | float32 | 256 | IP | 3 GB |
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| [Unum UForm Wiki][unum-wiki-1m] | float32 | 256 | IP | 1 GB |
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| [Yandex Text-to-Image Sample][unum-t2i] | float32 | 200 | Cos | 1 GB |
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| [Microsoft SPACEV][spacev] | int8 | 100 | L2 | 93 GB |
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| [Microsoft Turing-ANNS][turing] | float32 | 100 | L2 | 373 GB |
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| [Yandex Deep1B][deep] | float32 | 96 | L2 | 358 GB |
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| [Yandex Text-to-Image][t2i] | float32 | 200 | Cos | 750 GB |
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[unum-cc-3m]: https://huggingface.co/datasets/unum-cloud/ann-cc-3m
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[unum-wiki-1m]: https://huggingface.co/datasets/unum-cloud/ann-wiki-1m
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[unum-t2i]: https://huggingface.co/datasets/unum-cloud/ann-t2i-1m
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[spacev]: https://github.com/microsoft/SPTAG/tree/main/datasets/SPACEV1B
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[turing]: https://learning2hash.github.io/publications/microsoftturinganns1B/
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[t2i]: https://research.yandex.com/blog/benchmarks-for-billion-scale-similarity-search
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[deep]: https://research.yandex.com/blog/benchmarks-for-billion-scale-similarity-search
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[laion]: https://laion.ai/blog/laion-5b/#download-the-data
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### Unum UForm Wiki
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wget -nc https://huggingface.co/datasets/unum-cloud/ann-wiki-1m/resolve/main/base.1M.fbin -P datasets/wiki_1M/ &&
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wget -nc https://huggingface.co/datasets/unum-cloud/ann-wiki-1m/resolve/main/groundtruth.public.100K.ibin -P datasets/wiki_1M/
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```
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### Yandex Text-to-Image
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```sh
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-
mkdir -p datasets/t2i_1B/ && \
|
|
178
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/T2I/base.1B.fbin -P datasets/t2i_1B/ &&
|
|
179
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/T2I/base.1M.fbin -P datasets/t2i_1B/ &&
|
|
180
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/T2I/query.public.100K.fbin -P datasets/t2i_1B/ &&
|
|
181
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/T2I/groundtruth.public.100K.ibin -P datasets/t2i_1B/
|
|
182
|
-
```
|
|
183
|
-
|
|
184
|
-
### Yandex Deep1B
|
|
185
|
-
|
|
186
|
-
```sh
|
|
187
|
-
mkdir -p datasets/deep_1B/ && \
|
|
188
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/DEEP/base.1B.fbin -P datasets/deep_1B/ &&
|
|
189
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/DEEP/base.10M.fbin -P datasets/deep_1B/ &&
|
|
190
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/DEEP/query.public.10K.fbin -P datasets/deep_1B/ &&
|
|
191
|
-
wget -nc https://storage.yandexcloud.net/yandex-research/ann-datasets/DEEP/groundtruth.public.10K.ibin -P datasets/deep_1B/
|
|
192
|
-
```
|
|
193
|
-
|
|
194
|
-
### Arxiv with E5
|
|
195
|
-
|
|
196
|
-
```sh
|
|
197
|
-
mkdir -p datasets/arxiv_2M/ && \
|
|
198
|
-
wget -nc https://huggingface.co/datasets/unum-cloud/ann-arxiv-2m/resolve/main/abstract.e5-base-v2.fbin -P datasets/arxiv_2M/ &&
|
|
199
|
-
wget -nc https://huggingface.co/datasets/unum-cloud/ann-arxiv-2m/resolve/main/title.e5-base-v2.fbin -P datasets/arxiv_2M/
|
|
200
|
-
```
|
|
201
|
-
|
|
202
|
-
## Profiling
|
|
203
|
-
|
|
204
|
-
With `perf`:
|
|
205
|
-
|
|
206
|
-
```sh
|
|
207
|
-
# Pass environment variables with `-E`, and `-d` for details
|
|
208
|
-
sudo -E perf stat -d ./build_release/bench ...
|
|
209
|
-
sudo -E perf mem -d ./build_release/bench ...
|
|
210
|
-
# Sample on-CPU functions for the specified command, at 1 Kilo Hertz:
|
|
211
|
-
sudo -E perf record -F 1000 ./build_release/bench ...
|
|
212
|
-
perf record -d -e arm_spe// -- ./build_release/bench ..
|
|
213
|
-
```
|
|
214
|
-
|
|
215
|
-
### Caches
|
|
216
|
-
|
|
217
|
-
```sh
|
|
218
|
-
sudo perf stat -e 'faults,dTLB-loads,dTLB-load-misses,cache-misses,cache-references' ./build_release/bench ...
|
|
219
|
-
```
|
|
220
|
-
|
|
221
|
-
Typical output on a 1M vectors dataset is:
|
|
222
|
-
|
|
223
|
-
```txt
|
|
224
|
-
255426 faults
|
|
225
|
-
305988813388 dTLB-loads
|
|
226
|
-
8845723783 dTLB-load-misses # 2.89% of all dTLB cache accesses
|
|
227
|
-
20094264206 cache-misses # 6.567 % of all cache refs
|
|
228
|
-
305988812745 cache-references
|
|
229
|
-
|
|
230
|
-
8.285148010 seconds time elapsed
|
|
231
|
-
|
|
232
|
-
500.705967000 seconds user
|
|
233
|
-
1.371118000 seconds sys
|
|
234
|
-
```
|
|
235
|
-
|
|
236
|
-
If you notice problems and the stalls are closer to 90%, it might be a good reason to consider enabling Huge Pages and tuning allocations alignment.
|
|
237
|
-
To enable Huge Pages:
|
|
238
|
-
|
|
239
|
-
```sh
|
|
240
|
-
sudo cat /proc/sys/vm/nr_hugepages
|
|
241
|
-
sudo sysctl -w vm.nr_hugepages=2048
|
|
242
|
-
sudo reboot
|
|
243
|
-
sudo cat /proc/sys/vm/nr_hugepages
|
|
244
|
-
```
|
|
245
|
-
|
package/docs/benchmarks.rst
DELETED
package/docs/c/index.rst
DELETED