tryassay 0.22.1 → 0.23.0

package/dist/cli.js

@@ -15,6 +15,7 @@ import { apiStartCommand } from './commands/api.js';
 import { generateCommand } from './commands/generate.js';
 import { runtimeCreateCommand } from './commands/create.js';
 import { demoCommand } from './commands/demo.js';
+import { suppressCommand, suppressionsListCommand, suppressionsClearCommand } from './commands/suppress.js';
 const program = new Command();
 program
     .name('assay')
@@ -93,6 +94,27 @@ program
     .option('--no-review', 'Skip interactive manifest review (CI mode)')
     .option('-y, --yes', 'Auto-confirm manifest without interactive prompt')
     .action(assessCommand);
+// ── Suppressions (False Positive Management) ─────────────────
+program
+    .command('suppress')
+    .description('Mark a claim as false positive for future runs')
+    .argument('<claim-id>', 'Claim ID from assessment output (8-char hex)')
+    .option('--reason <reason>', 'Why this is a false positive')
+    .option('--path <path>', 'Project path', '.')
+    .action(suppressCommand);
+const suppressions = program
+    .command('suppressions')
+    .description('Manage false positive suppressions');
+suppressions
+    .command('list')
+    .description('List all suppressed claims')
+    .option('--path <path>', 'Project path', '.')
+    .action(suppressionsListCommand);
+suppressions
+    .command('clear')
+    .description('Remove all suppressions')
+    .option('--path <path>', 'Project path', '.')
+    .action(suppressionsClearCommand);
 // ── Runtime (Verified Agent Runtime) ─────────────────────────
 const runtime = program
     .command('runtime')

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/commands/assess.js

@@ -1,6 +1,7 @@
 import { resolve, basename } from 'node:path';
 import { stat, mkdir, writeFile, readFile } from 'node:fs/promises';
 import { safeExecSync } from '../runtime/safe-executor.js';
+import { generateClaimId } from '../lib/claim-id.js';
 import { indexCodebase } from '../lib/codebase-indexer.js';
 import { extractIntent, flowToClaims } from '../lib/intent-extractor.js';
 import { loadSavedManifest, diffManifest, reviewManifest, saveManifest } from '../lib/intent-reviewer.js';
@@ -9,7 +10,9 @@ import { generateAssessmentReport } from '../lib/assessment-reporter.js';
 import { publishAssessment } from '../lib/publisher.js';
 import { getCatalogChecks } from '../runtime/check-catalog.js';
 import { CheckExecutor } from '../runtime/check-definitions.js';
-const OUTPUT_DIR = '.assay-assessment';
+import { migrateOutputDir } from '../lib/output-dir.js';
+import { loadOverrides } from '../lib/overrides.js';
+const OUTPUT_DIR = '.assay';
 const DEFAULT_API_URL = 'https://tryassay.ai';
 const DEFAULT_CONCURRENCY = 5;
 // ── Concurrency limiter ──────────────────────────────────────────────
@@ -199,9 +202,19 @@ export async function assessCommand(target, options) {
         domains: options.domain?.split(',').map(d => d.trim()),
         concurrency: parseInt(options.concurrency || String(DEFAULT_CONCURRENCY), 10),
     };
+    // Migrate legacy output directory if needed
+    const migration = await migrateOutputDir(path);
+    if (migration.message)
+        console.log(`  ${migration.message}`);
     // Create output directory structure
     const outputDir = resolve(path, OUTPUT_DIR);
     await mkdir(resolve(outputDir, 'verifications'), { recursive: true });
+    // Load suppression overrides
+    const overrides = await loadOverrides(path);
+    const suppressedIds = new Set(overrides.suppressions.map((s) => s.claimId));
+    if (suppressedIds.size > 0) {
+        console.log(`  ${suppressedIds.size} suppressed claim(s) loaded from .assay/overrides.json`);
+    }
     // Step 1: Index codebase
     console.log('[1/8] Indexing codebase...');
     const index = await indexCodebase(config.targetPath);
@@ -275,15 +288,27 @@ export async function assessCommand(target, options) {
     const allVerifications = flowResults.flatMap((r) => r.verifications);
     const allBugs = flowResults.flatMap((r) => r.bugs);
     const allClaims = flowResults.flatMap((r) => r.claims);
+    // Filter out suppressed claims from scoring
+    const activeVerifications = allVerifications.filter((v) => {
+        const flow = flowResults.find((r) => r.verifications.includes(v));
+        if (!flow)
+            return true;
+        const id = generateClaimId(flow.requirement.id, v.claim, v.evidence[0]?.file ?? '');
+        return !suppressedIds.has(id);
+    });
+    const suppressedCount = allVerifications.length - activeVerifications.length;
     const verdictCounts = {
-        pass: allVerifications.filter((v) => v.verdict === 'PASS').length,
-        partial: allVerifications.filter((v) => v.verdict === 'PARTIAL').length,
-        fail: allVerifications.filter((v) => v.verdict === 'FAIL').length,
-        na: allVerifications.filter((v) => v.verdict === 'N/A').length,
+        pass: activeVerifications.filter((v) => v.verdict === 'PASS').length,
+        partial: activeVerifications.filter((v) => v.verdict === 'PARTIAL').length,
+        fail: activeVerifications.filter((v) => v.verdict === 'FAIL').length,
+        na: activeVerifications.filter((v) => v.verdict === 'N/A').length,
     };
     console.log(`       \u2713 ${totalFlows} flows processed`);
     console.log(`       \u2713 ${allClaims.length} claims extracted`);
     console.log(`       \u2713 Verdicts: ${verdictCounts.pass} PASS, ${verdictCounts.partial} PARTIAL, ${verdictCounts.fail} FAIL, ${verdictCounts.na} N/A`);
+    if (suppressedCount > 0) {
+        console.log(`       ${suppressedCount} suppressed claim(s) excluded from scoring`);
+    }
     console.log(`       \u2713 ${allBugs.length} bugs found (FAIL + PARTIAL)`);
     console.log(`       \u2713 Tokens: ${totalInputTokens.toLocaleString()} in / ${totalOutputTokens.toLocaleString()} out`);
     // Write summary JSON for downstream consumption (report generation, publish)
@@ -322,7 +347,17 @@ export async function assessCommand(target, options) {
                 fail: r.verifications.filter((v) => v.verdict === 'FAIL').length,
                 na: r.verifications.filter((v) => v.verdict === 'N/A').length,
             },
+            claims: r.verifications.map((v) => ({
+                id: generateClaimId(r.requirement.id, v.claim, v.evidence[0]?.file ?? ''),
+                claim: v.claim,
+                verdict: v.verdict,
+                file: v.evidence[0]?.file ?? '',
+            })),
         })),
+        suppressions: {
+            count: suppressedCount,
+            ids: Array.from(suppressedIds),
+        },
         inputTokens: totalInputTokens,
         outputTokens: totalOutputTokens,
         completedAt: new Date().toISOString(),
@@ -346,7 +381,7 @@ export async function assessCommand(target, options) {
         }
         catch (err) {
             console.error(`\n  Publishing failed: ${err instanceof Error ? err.message : err}`);
-            console.log('  Results are still available locally in .assay-assessment/\n');
+            console.log('  Results are still available locally in .assay/\n');
         }
     }
     console.log(`\n\u2713 Assessment complete. Output: ${outputDir}`);

package/dist/commands/assess.js.map

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package/dist/commands/suppress.d.ts

@@ -0,0 +1,10 @@
+export declare function suppressCommand(claimId: string, opts: {
+    reason?: string;
+    path?: string;
+}): Promise<void>;
+export declare function suppressionsListCommand(opts: {
+    path?: string;
+}): Promise<void>;
+export declare function suppressionsClearCommand(opts: {
+    path?: string;
+}): Promise<void>;

package/dist/commands/suppress.js

@@ -0,0 +1,54 @@
+import { resolve } from 'node:path';
+import { readFile } from 'node:fs/promises';
+import { addSuppression, loadOverrides, saveOverrides } from '../lib/overrides.js';
+export async function suppressCommand(claimId, opts) {
+    const basePath = resolve(opts.path ?? '.');
+    const reason = opts.reason ?? 'Marked as false positive';
+    // Try to find the claim in the latest assessment
+    const summaryPath = resolve(basePath, '.assay', 'assessment-summary.json');
+    let file = '';
+    let claim = '';
+    try {
+        const summary = JSON.parse(await readFile(summaryPath, 'utf-8'));
+        for (const flow of summary.flowResults ?? []) {
+            for (const c of flow.claims ?? []) {
+                if (c.id === claimId) {
+                    file = c.file;
+                    claim = c.claim;
+                    break;
+                }
+            }
+            if (claim)
+                break;
+        }
+    }
+    catch {
+        // No summary available, proceed with just the ID
+    }
+    if (!claim) {
+        console.log(`Warning: Claim ${claimId} not found in latest assessment. Suppressing by ID only.`);
+    }
+    await addSuppression(basePath, { claimId, file, claim, reason });
+    console.log(`Suppressed claim ${claimId}${claim ? `: ${claim}` : ''}`);
+}
+export async function suppressionsListCommand(opts) {
+    const basePath = resolve(opts.path ?? '.');
+    const overrides = await loadOverrides(basePath);
+    if (overrides.suppressions.length === 0) {
+        console.log('No suppressions configured.');
+        return;
+    }
+    console.log(`${overrides.suppressions.length} suppression(s):\n`);
+    for (const s of overrides.suppressions) {
+        console.log(`  ${s.claimId}  ${s.claim || '(no claim text)'}`);
+        console.log(`    File: ${s.file || '(unknown)'}`);
+        console.log(`    Reason: ${s.reason}`);
+        console.log(`    Added: ${s.suppressedAt}\n`);
+    }
+}
+export async function suppressionsClearCommand(opts) {
+    const basePath = resolve(opts.path ?? '.');
+    await saveOverrides(basePath, { suppressions: [] });
+    console.log('All suppressions cleared.');
+}
+//# sourceMappingURL=suppress.js.map

package/dist/commands/suppress.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"suppress.js","sourceRoot":"","sources":["../../src/commands/suppress.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AAEnF,MAAM,CAAC,KAAK,UAAU,eAAe,CAAC,OAAe,EAAE,IAAwC;IAC7F,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,IAAI,GAAG,CAAC,CAAC;IAC3C,MAAM,MAAM,GAAG,IAAI,CAAC,MAAM,IAAI,0BAA0B,CAAC;IAEzD,iDAAiD;IACjD,MAAM,WAAW,GAAG,OAAO,CAAC,QAAQ,EAAE,QAAQ,EAAE,yBAAyB,CAAC,CAAC;IAC3E,IAAI,IAAI,GAAG,EAAE,CAAC;IACd,IAAI,KAAK,GAAG,EAAE,CAAC;IAEf,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,QAAQ,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC,CAAC;QACjE,KAAK,MAAM,IAAI,IAAI,OAAO,CAAC,WAAW,IAAI,EAAE,EAAE,CAAC;YAC7C,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,MAAM,IAAI,EAAE,EAAE,CAAC;gBAClC,IAAI,CAAC,CAAC,EAAE,KAAK,OAAO,EAAE,CAAC;oBACrB,IAAI,GAAG,CAAC,CAAC,IAAI,CAAC;oBACd,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC;oBAChB,MAAM;gBACR,CAAC;YACH,CAAC;YACD,IAAI,KAAK;gBAAE,MAAM;QACnB,CAAC;IACH,CAAC;IAAC,MAAM,CAAC;QACP,iDAAiD;IACnD,CAAC;IAED,IAAI,CAAC,KAAK,EAAE,CAAC;QACX,OAAO,CAAC,GAAG,CAAC,kBAAkB,OAAO,0DAA0D,CAAC,CAAC;IACnG,CAAC;IAED,MAAM,cAAc,CAAC,QAAQ,EAAE,EAAE,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,MAAM,EAAE,CAAC,CAAC;IACjE,OAAO,CAAC,GAAG,CAAC,oBAAoB,OAAO,GAAG,KAAK,CAAC,CAAC,CAAC,KAAK,KAAK,EAAE,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;AACzE,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,uBAAuB,CAAC,IAAuB;IACnE,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,IAAI,GAAG,CAAC,CAAC;IAC3C,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,QAAQ,CAAC,CAAC;IAEhD,IAAI,SAAS,CAAC,YAAY,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACxC,OAAO,CAAC,GAAG,CAAC,6BAA6B,CAAC,CAAC;QAC3C,OAAO;IACT,CAAC;IAED,OAAO,CAAC,GAAG,CAAC,GAAG,SAAS,CAAC,YAAY,CAAC,MAAM,oBAAoB,CAAC,CAAC;IAClE,KAAK,MAAM,CAAC,IAAI,SAAS,CAAC,YAAY,EAAE,CAAC;QACvC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC,KAAK,IAAI,iBAAiB,EAAE,CAAC,CAAC;QAC/D,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,IAAI,WAAW,EAAE,CAAC,CAAC;QAClD,OAAO,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC;QACvC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC,YAAY,IAAI,CAAC,CAAC;IAChD,CAAC;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,wBAAwB,CAAC,IAAuB;IACpE,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,IAAI,GAAG,CAAC,CAAC;IAC3C,MAAM,aAAa,CAAC,QAAQ,EAAE,EAAE,YAAY,EAAE,EAAE,EAAE,CAAC,CAAC;IACpD,OAAO,CAAC,GAAG,CAAC,2BAA2B,CAAC,CAAC;AAC3C,CAAC"}

package/dist/lib/__tests__/claim-id.test.d.ts

@@ -0,0 +1 @@
+export {};

package/dist/lib/__tests__/claim-id.test.js

@@ -0,0 +1,24 @@
+import { describe, it, expect } from 'vitest';
+import { generateClaimId } from '../claim-id.js';
+describe('generateClaimId', () => {
+    it('produces 8-char hex string', () => {
+        const id = generateClaimId('flow-1', 'Route requires auth', 'src/middleware.ts');
+        expect(id).toMatch(/^[a-f0-9]{8}$/);
+    });
+    it('is deterministic for same inputs', () => {
+        const a = generateClaimId('flow-1', 'Route requires auth', 'src/middleware.ts');
+        const b = generateClaimId('flow-1', 'Route requires auth', 'src/middleware.ts');
+        expect(a).toBe(b);
+    });
+    it('differs when claim text differs', () => {
+        const a = generateClaimId('flow-1', 'Route requires auth', 'src/middleware.ts');
+        const b = generateClaimId('flow-1', 'Route is public', 'src/middleware.ts');
+        expect(a).not.toBe(b);
+    });
+    it('differs when file differs', () => {
+        const a = generateClaimId('flow-1', 'Route requires auth', 'src/a.ts');
+        const b = generateClaimId('flow-1', 'Route requires auth', 'src/b.ts');
+        expect(a).not.toBe(b);
+    });
+});
+//# sourceMappingURL=claim-id.test.js.map

package/dist/lib/__tests__/claim-id.test.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"claim-id.test.js","sourceRoot":"","sources":["../../../src/lib/__tests__/claim-id.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,MAAM,EAAE,MAAM,QAAQ,CAAC;AAC9C,OAAO,EAAE,eAAe,EAAE,MAAM,gBAAgB,CAAC;AAEjD,QAAQ,CAAC,iBAAiB,EAAE,GAAG,EAAE;IAC/B,EAAE,CAAC,4BAA4B,EAAE,GAAG,EAAE;QACpC,MAAM,EAAE,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,mBAAmB,CAAC,CAAC;QACjF,MAAM,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,eAAe,CAAC,CAAC;IACtC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,kCAAkC,EAAE,GAAG,EAAE;QAC1C,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,mBAAmB,CAAC,CAAC;QAChF,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,mBAAmB,CAAC,CAAC;QAChF,MAAM,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,iCAAiC,EAAE,GAAG,EAAE;QACzC,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,mBAAmB,CAAC,CAAC;QAChF,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,iBAAiB,EAAE,mBAAmB,CAAC,CAAC;QAC5E,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACxB,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,2BAA2B,EAAE,GAAG,EAAE;QACnC,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,UAAU,CAAC,CAAC;QACvE,MAAM,CAAC,GAAG,eAAe,CAAC,QAAQ,EAAE,qBAAqB,EAAE,UAAU,CAAC,CAAC;QACvE,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACxB,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}

package/dist/lib/__tests__/output-dir-migration.test.d.ts

@@ -0,0 +1 @@
+export {};

package/dist/lib/__tests__/output-dir-migration.test.js

@@ -0,0 +1,33 @@
+import { describe, it, expect, beforeEach } from 'vitest';
+import { mkdtemp, mkdir, writeFile, readFile, stat } from 'node:fs/promises';
+import { join } from 'node:path';
+import { tmpdir } from 'node:os';
+import { migrateOutputDir } from '../output-dir.js';
+describe('migrateOutputDir', () => {
+    let tempDir;
+    beforeEach(async () => {
+        tempDir = await mkdtemp(join(tmpdir(), 'assay-test-'));
+    });
+    it('migrates .assay-assessment/ to .assay/ when only old dir exists', async () => {
+        const oldDir = join(tempDir, '.assay-assessment');
+        await mkdir(oldDir, { recursive: true });
+        await writeFile(join(oldDir, 'assessment-summary.json'), '{"test":true}');
+        const result = await migrateOutputDir(tempDir);
+        expect(result.migrated).toBe(true);
+        const content = await readFile(join(tempDir, '.assay', 'assessment-summary.json'), 'utf-8');
+        expect(JSON.parse(content)).toEqual({ test: true });
+        await expect(stat(oldDir)).rejects.toThrow();
+    });
+    it('does nothing when .assay/ already exists', async () => {
+        const newDir = join(tempDir, '.assay');
+        await mkdir(newDir, { recursive: true });
+        await writeFile(join(newDir, 'data.json'), '{"existing":true}');
+        const result = await migrateOutputDir(tempDir);
+        expect(result.migrated).toBe(false);
+    });
+    it('does nothing when neither directory exists', async () => {
+        const result = await migrateOutputDir(tempDir);
+        expect(result.migrated).toBe(false);
+    });
+});
+//# sourceMappingURL=output-dir-migration.test.js.map

package/dist/lib/__tests__/output-dir-migration.test.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"output-dir-migration.test.js","sourceRoot":"","sources":["../../../src/lib/__tests__/output-dir-migration.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,QAAQ,CAAC;AAC1D,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,QAAQ,EAAE,IAAI,EAAE,MAAM,kBAAkB,CAAC;AAC7E,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AACjC,OAAO,EAAE,gBAAgB,EAAE,MAAM,kBAAkB,CAAC;AAEpD,QAAQ,CAAC,kBAAkB,EAAE,GAAG,EAAE;IAChC,IAAI,OAAe,CAAC;IAEpB,UAAU,CAAC,KAAK,IAAI,EAAE;QACpB,OAAO,GAAG,MAAM,OAAO,CAAC,IAAI,CAAC,MAAM,EAAE,EAAE,aAAa,CAAC,CAAC,CAAC;IACzD,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,iEAAiE,EAAE,KAAK,IAAI,EAAE;QAC/E,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,EAAE,mBAAmB,CAAC,CAAC;QAClD,MAAM,KAAK,CAAC,MAAM,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QACzC,MAAM,SAAS,CAAC,IAAI,CAAC,MAAM,EAAE,yBAAyB,CAAC,EAAE,eAAe,CAAC,CAAC;QAC1E,MAAM,MAAM,GAAG,MAAM,gBAAgB,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACnC,MAAM,OAAO,GAAG,MAAM,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE,QAAQ,EAAE,yBAAyB,CAAC,EAAE,OAAO,CAAC,CAAC;QAC5F,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,EAAE,IAAI,EAAE,IAAI,EAAE,CAAC,CAAC;QACpD,MAAM,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,CAAC,OAAO,EAAE,CAAC;IAC/C,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,0CAA0C,EAAE,KAAK,IAAI,EAAE;QACxD,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACvC,MAAM,KAAK,CAAC,MAAM,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QACzC,MAAM,SAAS,CAAC,IAAI,CAAC,MAAM,EAAE,WAAW,CAAC,EAAE,mBAAmB,CAAC,CAAC;QAChE,MAAM,MAAM,GAAG,MAAM,gBAAgB,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACtC,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,4CAA4C,EAAE,KAAK,IAAI,EAAE;QAC1D,MAAM,MAAM,GAAG,MAAM,gBAAgB,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACtC,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}

package/dist/lib/__tests__/overrides.test.d.ts

@@ -0,0 +1 @@
+export {};

package/dist/lib/__tests__/overrides.test.js

@@ -0,0 +1,55 @@
+import { describe, it, expect, beforeEach } from 'vitest';
+import { mkdtemp, mkdir, writeFile } from 'node:fs/promises';
+import { join } from 'node:path';
+import { tmpdir } from 'node:os';
+import { loadOverrides, addSuppression } from '../overrides.js';
+describe('overrides', () => {
+    let tempDir;
+    let assayDir;
+    beforeEach(async () => {
+        tempDir = await mkdtemp(join(tmpdir(), 'assay-test-'));
+        assayDir = join(tempDir, '.assay');
+        await mkdir(assayDir, { recursive: true });
+    });
+    it('returns empty suppressions when no overrides file exists', async () => {
+        const overrides = await loadOverrides(tempDir);
+        expect(overrides.suppressions).toEqual([]);
+    });
+    it('loads existing overrides file', async () => {
+        const data = {
+            suppressions: [
+                {
+                    claimId: 'abc12345',
+                    file: 'a.ts',
+                    claim: 'test',
+                    reason: 'false positive',
+                    suppressedAt: '2026-01-01T00:00:00Z',
+                    suppressedBy: 'manual',
+                },
+            ],
+        };
+        await writeFile(join(assayDir, 'overrides.json'), JSON.stringify(data));
+        const overrides = await loadOverrides(tempDir);
+        expect(overrides.suppressions).toHaveLength(1);
+        expect(overrides.suppressions[0].claimId).toBe('abc12345');
+    });
+    it('adds a suppression and saves', async () => {
+        await addSuppression(tempDir, {
+            claimId: 'def67890',
+            file: 'src/route.ts',
+            claim: 'Route requires auth',
+            reason: 'Intentionally public',
+        });
+        const overrides = await loadOverrides(tempDir);
+        expect(overrides.suppressions).toHaveLength(1);
+        expect(overrides.suppressions[0].claimId).toBe('def67890');
+        expect(overrides.suppressions[0].suppressedBy).toBe('manual');
+    });
+    it('does not add duplicate suppressions', async () => {
+        await addSuppression(tempDir, { claimId: 'aaa11111', file: 'a.ts', claim: 'x', reason: 'y' });
+        await addSuppression(tempDir, { claimId: 'aaa11111', file: 'a.ts', claim: 'x', reason: 'z' });
+        const overrides = await loadOverrides(tempDir);
+        expect(overrides.suppressions).toHaveLength(1);
+    });
+});
+//# sourceMappingURL=overrides.test.js.map

package/dist/lib/__tests__/overrides.test.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"overrides.test.js","sourceRoot":"","sources":["../../../src/lib/__tests__/overrides.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,EAAE,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,QAAQ,CAAC;AAC1D,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,MAAM,kBAAkB,CAAC;AAC7D,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AACjC,OAAO,EAAE,aAAa,EAAiB,cAAc,EAAE,MAAM,iBAAiB,CAAC;AAE/E,QAAQ,CAAC,WAAW,EAAE,GAAG,EAAE;IACzB,IAAI,OAAe,CAAC;IACpB,IAAI,QAAgB,CAAC;IAErB,UAAU,CAAC,KAAK,IAAI,EAAE;QACpB,OAAO,GAAG,MAAM,OAAO,CAAC,IAAI,CAAC,MAAM,EAAE,EAAE,aAAa,CAAC,CAAC,CAAC;QACvD,QAAQ,GAAG,IAAI,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACnC,MAAM,KAAK,CAAC,QAAQ,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IAC7C,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,0DAA0D,EAAE,KAAK,IAAI,EAAE;QACxE,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IAC7C,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,+BAA+B,EAAE,KAAK,IAAI,EAAE;QAC7C,MAAM,IAAI,GAAG;YACX,YAAY,EAAE;gBACZ;oBACE,OAAO,EAAE,UAAU;oBACnB,IAAI,EAAE,MAAM;oBACZ,KAAK,EAAE,MAAM;oBACb,MAAM,EAAE,gBAAgB;oBACxB,YAAY,EAAE,sBAAsB;oBACpC,YAAY,EAAE,QAAQ;iBACvB;aACF;SACF,CAAC;QACF,MAAM,SAAS,CAAC,IAAI,CAAC,QAAQ,EAAE,gBAAgB,CAAC,EAAE,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC;QACxE,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;IAC7D,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,8BAA8B,EAAE,KAAK,IAAI,EAAE;QAC5C,MAAM,cAAc,CAAC,OAAO,EAAE;YAC5B,OAAO,EAAE,UAAU;YACnB,IAAI,EAAE,cAAc;YACpB,KAAK,EAAE,qBAAqB;YAC5B,MAAM,EAAE,sBAAsB;SAC/B,CAAC,CAAC;QACH,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;QAC3D,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;IAChE,CAAC,CAAC,CAAC;IAEH,EAAE,CAAC,qCAAqC,EAAE,KAAK,IAAI,EAAE;QACnD,MAAM,cAAc,CAAC,OAAO,EAAE,EAAE,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,CAAC;QAC9F,MAAM,cAAc,CAAC,OAAO,EAAE,EAAE,OAAO,EAAE,UAAU,EAAE,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,CAAC;QAC9F,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,OAAO,CAAC,CAAC;QAC/C,MAAM,CAAC,SAAS,CAAC,YAAY,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC;IACjD,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}

package/dist/lib/assessment-reporter.js

@@ -3,6 +3,7 @@ import { resolve } from 'node:path';
 import { randomUUID } from 'node:crypto';
 import { MODEL } from './anthropic.js';
 import { getProvider } from './llm-provider.js';
+import { generateClaimId } from './claim-id.js';
 // ── Severity ordering for sort ──────────────────────────────────────
 const SEVERITY_ORDER = {
     critical: 0,
@@ -38,6 +39,7 @@ function collectBugEntries(routeResults, severityMap) {
             entries.push({
                 bug,
                 severity: getBugSeverity(bug, severityMap),
+                flowId: route.requirement.id,
                 route: route.requirement.route,
                 domain: route.requirement.domain,
                 category: claim?.category ?? 'functionality',
@@ -79,10 +81,11 @@ function generateBugReport(entries, repoName, bugCounts) {
         for (const entry of sevEntries) {
             bugNumber++;
             const bugId = `BUG-${String(bugNumber).padStart(3, '0')}`;
+            const claimId = generateClaimId(entry.flowId, entry.bug.claim, entry.bug.evidence[0]?.file ?? '');
             const evidenceLines = entry.bug.evidence.length > 0
                 ? entry.bug.evidence.map((e) => `  - \`${e.file}${e.lineNumber ? ':' + e.lineNumber : ''}\` -- ${e.snippet}`)
                 : ['  - No specific file evidence'];
-            lines.push(`### ${bugId}: ${entry.bug.claim}`, `- **Route:** ${entry.route}`, `- **Domain:** ${entry.domain}`, `- **Category:** ${entry.category}`, `- **Verdict:** ${entry.bug.verdict}`, `- **Evidence:**`, ...evidenceLines, `- **Reasoning:** ${entry.bug.reasoning}`, ``);
+            lines.push(`### ${bugId} [ID: ${claimId}]: ${entry.bug.claim}`, `- **Route:** ${entry.route}`, `- **Domain:** ${entry.domain}`, `- **Category:** ${entry.category}`, `- **Verdict:** ${entry.bug.verdict}`, `- **Suppress:** \`npx tryassay suppress ${claimId}\``, `- **Evidence:**`, ...evidenceLines, `- **Reasoning:** ${entry.bug.reasoning}`, ``);
         }
     }
     if (entries.length === 0) {

package/dist/lib/assessment-reporter.js.map

@@ -1 +1 @@
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package/dist/lib/claim-id.d.ts

@@ -0,0 +1 @@
+export declare function generateClaimId(flowId: string, claimText: string, filePath: string): string;

package/dist/lib/claim-id.js

@@ -0,0 +1,6 @@
+import { createHash } from 'node:crypto';
+export function generateClaimId(flowId, claimText, filePath) {
+    const input = `${flowId}::${claimText}::${filePath}`;
+    return createHash('sha256').update(input).digest('hex').slice(0, 8);
+}
+//# sourceMappingURL=claim-id.js.map

package/dist/lib/claim-id.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"claim-id.js","sourceRoot":"","sources":["../../src/lib/claim-id.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAEzC,MAAM,UAAU,eAAe,CAAC,MAAc,EAAE,SAAiB,EAAE,QAAgB;IACjF,MAAM,KAAK,GAAG,GAAG,MAAM,KAAK,SAAS,KAAK,QAAQ,EAAE,CAAC;IACrD,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;AACtE,CAAC"}

package/dist/lib/intent-extractor.js

@@ -181,6 +181,11 @@ function normalizeGap(g) {
  */
 export function parseIntentResponse(rawText) {
     let jsonText = stripCodeFences(rawText);
+    // Strip any preamble text before the first JSON object
+    const firstBrace = jsonText.indexOf('{');
+    if (firstBrace > 0) {
+        jsonText = jsonText.slice(firstBrace);
+    }
     jsonText = closeUnclosedJson(jsonText);
     let parsed;
     try {

package/dist/lib/intent-extractor.js.map

@@ -1 +1 @@
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package/dist/lib/llm-provider.js

@@ -54,8 +54,8 @@ export class ClaudeCliProvider {
             '-p',
             '--output-format', 'json',
             '--model', opts.model,
-            '--max-turns', '1',
-            '--tools', '',
+            '--max-turns', '2',
+            '--allowedTools', '',
             '--no-session-persistence',
             '--system-prompt', opts.systemPrompt,
         ], opts.userPrompt, {
@@ -72,11 +72,40 @@ export class ClaudeCliProvider {
         let outputTokens = null;
         try {
             const parsed = JSON.parse(result.stdout);
-            // The JSON format has a "result" field with the text content
-            content = parsed.result ?? parsed.content ?? result.stdout;
-            if (parsed.usage) {
-                inputTokens = parsed.usage.input_tokens ?? null;
-                outputTokens = parsed.usage.output_tokens ?? null;
+            // Claude CLI --output-format json returns { type: "result", result: "text content", ... }
+            // Extract text content, handling various response shapes
+            if (typeof parsed.result === 'string') {
+                content = parsed.result;
+            }
+            else if (typeof parsed.content === 'string') {
+                content = parsed.content;
+            }
+            else if (Array.isArray(parsed.content)) {
+                // content may be an array of blocks like [{ type: "text", text: "..." }]
+                content = parsed.content
+                    .filter((b) => b.type === 'text')
+                    .map((b) => b.text)
+                    .join('');
+            }
+            else {
+                // Fallback: stringify the whole thing
+                content = result.stdout;
+            }
+            // Extract usage from either top-level or nested
+            const usage = parsed.usage ?? parsed.modelUsage;
+            if (usage) {
+                if (usage.input_tokens != null) {
+                    inputTokens = usage.input_tokens;
+                    outputTokens = usage.output_tokens ?? null;
+                }
+                else {
+                    // modelUsage format: { "model-name": { inputTokens, outputTokens } }
+                    const firstModel = Object.values(usage)[0];
+                    if (firstModel) {
+                        inputTokens = firstModel.inputTokens ?? null;
+                        outputTokens = firstModel.outputTokens ?? null;
+                    }
+                }
             }
         }
         catch {

package/dist/lib/llm-provider.js.map

@@ -1 +1 @@
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package/dist/lib/output-dir.d.ts

@@ -0,0 +1,4 @@
+export declare function migrateOutputDir(basePath: string): Promise<{
+    migrated: boolean;
+    message?: string;
+}>;

package/dist/lib/output-dir.js

@@ -0,0 +1,19 @@
+import { rename, stat } from 'node:fs/promises';
+import { join } from 'node:path';
+const OLD_DIR = '.assay-assessment';
+const NEW_DIR = '.assay';
+export async function migrateOutputDir(basePath) {
+    const oldPath = join(basePath, OLD_DIR);
+    const newPath = join(basePath, NEW_DIR);
+    const oldExists = await stat(oldPath).then(() => true).catch(() => false);
+    const newExists = await stat(newPath).then(() => true).catch(() => false);
+    if (oldExists && !newExists) {
+        await rename(oldPath, newPath);
+        return { migrated: true, message: `Migrated ${OLD_DIR}/ to ${NEW_DIR}/` };
+    }
+    if (oldExists && newExists) {
+        return { migrated: false, message: `Found both ${OLD_DIR}/ and ${NEW_DIR}/. Using ${NEW_DIR}/.` };
+    }
+    return { migrated: false };
+}
+//# sourceMappingURL=output-dir.js.map

package/dist/lib/output-dir.js.map

@@ -0,0 +1 @@
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package/dist/lib/overrides.d.ts

@@ -0,0 +1,9 @@
+import type { OverridesConfig } from '../types.js';
+export declare function loadOverrides(basePath: string): Promise<OverridesConfig>;
+export declare function saveOverrides(basePath: string, overrides: OverridesConfig): Promise<void>;
+export declare function addSuppression(basePath: string, entry: {
+    claimId: string;
+    file: string;
+    claim: string;
+    reason: string;
+}): Promise<void>;

package/dist/lib/overrides.js

@@ -0,0 +1,32 @@
+import { readFile, writeFile, mkdir } from 'node:fs/promises';
+import { join } from 'node:path';
+const ASSAY_DIR = '.assay';
+const OVERRIDES_FILE = 'overrides.json';
+export async function loadOverrides(basePath) {
+    const filePath = join(basePath, ASSAY_DIR, OVERRIDES_FILE);
+    try {
+        const content = await readFile(filePath, 'utf-8');
+        return JSON.parse(content);
+    }
+    catch {
+        return { suppressions: [] };
+    }
+}
+export async function saveOverrides(basePath, overrides) {
+    const dirPath = join(basePath, ASSAY_DIR);
+    await mkdir(dirPath, { recursive: true });
+    await writeFile(join(dirPath, OVERRIDES_FILE), JSON.stringify(overrides, null, 2));
+}
+export async function addSuppression(basePath, entry) {
+    const overrides = await loadOverrides(basePath);
+    const exists = overrides.suppressions.some((s) => s.claimId === entry.claimId);
+    if (exists)
+        return;
+    overrides.suppressions.push({
+        ...entry,
+        suppressedAt: new Date().toISOString(),
+        suppressedBy: 'manual',
+    });
+    await saveOverrides(basePath, overrides);
+}
+//# sourceMappingURL=overrides.js.map

package/dist/lib/overrides.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"overrides.js","sourceRoot":"","sources":["../../src/lib/overrides.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,kBAAkB,CAAC;AAC9D,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAGjC,MAAM,SAAS,GAAG,QAAQ,CAAC;AAC3B,MAAM,cAAc,GAAG,gBAAgB,CAAC;AAExC,MAAM,CAAC,KAAK,UAAU,aAAa,CAAC,QAAgB;IAClD,MAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,EAAE,SAAS,EAAE,cAAc,CAAC,CAAC;IAC3D,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,MAAM,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;QAClD,OAAO,IAAI,CAAC,KAAK,CAAC,OAAO,CAAoB,CAAC;IAChD,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,YAAY,EAAE,EAAE,EAAE,CAAC;IAC9B,CAAC;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,aAAa,CAAC,QAAgB,EAAE,SAA0B;IAC9E,MAAM,OAAO,GAAG,IAAI,CAAC,QAAQ,EAAE,SAAS,CAAC,CAAC;IAC1C,MAAM,KAAK,CAAC,OAAO,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IAC1C,MAAM,SAAS,CAAC,IAAI,CAAC,OAAO,EAAE,cAAc,CAAC,EAAE,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;AACrF,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,cAAc,CAClC,QAAgB,EAChB,KAAuE;IAEvE,MAAM,SAAS,GAAG,MAAM,aAAa,CAAC,QAAQ,CAAC,CAAC;IAChD,MAAM,MAAM,GAAG,SAAS,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,OAAO,KAAK,KAAK,CAAC,OAAO,CAAC,CAAC;IAC/E,IAAI,MAAM;QAAE,OAAO;IAEnB,SAAS,CAAC,YAAY,CAAC,IAAI,CAAC;QAC1B,GAAG,KAAK;QACR,YAAY,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;QACtC,YAAY,EAAE,QAAQ;KACvB,CAAC,CAAC;IAEH,MAAM,aAAa,CAAC,QAAQ,EAAE,SAAS,CAAC,CAAC;AAC3C,CAAC"}

package/dist/types.d.ts

@@ -35,6 +35,17 @@ export interface ExtractionResult {
     testableClaims: number;
     extractedAt: string;
 }
+export interface ClaimSuppression {
+    claimId: string;
+    file: string;
+    claim: string;
+    reason: string;
+    suppressedAt: string;
+    suppressedBy: 'manual' | 'pattern';
+}
+export interface OverridesConfig {
+    suppressions: ClaimSuppression[];
+}
 export type Verdict = 'PASS' | 'PARTIAL' | 'FAIL' | 'N/A';
 export interface Evidence {
     file: string;

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "tryassay",
-  "version": "0.22.1",
+  "version": "0.23.0",
   "description": "AI code verification CLI — find bugs that tests miss, linters ignore, and code review overlooks",
   "type": "module",
   "main": "./dist/index.js",
@@ -49,7 +49,8 @@
     "@upstash/ratelimit": "^2.0.8",
     "@upstash/redis": "^1.36.2",
     "commander": "^13.1.0",
-    "openai": "^6.22.0"
+    "openai": "^6.22.0",
+    "stripe": "^20.4.1"
   },
   "devDependencies": {
     "@types/node": "^22.0.0",