trinity-method-sdk 2.0.0

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Files changed (191) hide show
  1. package/CHANGELOG.md +116 -0
  2. package/LICENSE +21 -0
  3. package/README.md +555 -0
  4. package/dist/cli/commands/deploy/agents.d.ts +14 -0
  5. package/dist/cli/commands/deploy/agents.js +59 -0
  6. package/dist/cli/commands/deploy/ci-cd.d.ts +13 -0
  7. package/dist/cli/commands/deploy/ci-cd.js +50 -0
  8. package/dist/cli/commands/deploy/claude-setup.d.ts +17 -0
  9. package/dist/cli/commands/deploy/claude-setup.js +91 -0
  10. package/dist/cli/commands/deploy/configuration.d.ts +13 -0
  11. package/dist/cli/commands/deploy/configuration.js +215 -0
  12. package/dist/cli/commands/deploy/directories.d.ts +12 -0
  13. package/dist/cli/commands/deploy/directories.js +38 -0
  14. package/dist/cli/commands/deploy/gitignore.d.ts +12 -0
  15. package/dist/cli/commands/deploy/gitignore.js +53 -0
  16. package/dist/cli/commands/deploy/index.d.ts +38 -0
  17. package/dist/cli/commands/deploy/index.js +156 -0
  18. package/dist/cli/commands/deploy/knowledge-base.d.ts +16 -0
  19. package/dist/cli/commands/deploy/knowledge-base.js +75 -0
  20. package/dist/cli/commands/deploy/linting.d.ts +18 -0
  21. package/dist/cli/commands/deploy/linting.js +51 -0
  22. package/dist/cli/commands/deploy/metrics.d.ts +13 -0
  23. package/dist/cli/commands/deploy/metrics.js +34 -0
  24. package/dist/cli/commands/deploy/pre-flight.d.ts +13 -0
  25. package/dist/cli/commands/deploy/pre-flight.js +29 -0
  26. package/dist/cli/commands/deploy/root-files.d.ts +16 -0
  27. package/dist/cli/commands/deploy/root-files.js +178 -0
  28. package/dist/cli/commands/deploy/sdk-install.d.ts +12 -0
  29. package/dist/cli/commands/deploy/sdk-install.js +57 -0
  30. package/dist/cli/commands/deploy/summary.d.ts +14 -0
  31. package/dist/cli/commands/deploy/summary.js +130 -0
  32. package/dist/cli/commands/deploy/templates.d.ts +14 -0
  33. package/dist/cli/commands/deploy/templates.js +84 -0
  34. package/dist/cli/commands/deploy/types.d.ts +39 -0
  35. package/dist/cli/commands/deploy/types.js +5 -0
  36. package/dist/cli/commands/update/agents.d.ts +14 -0
  37. package/dist/cli/commands/update/agents.js +31 -0
  38. package/dist/cli/commands/update/backup.d.ts +31 -0
  39. package/dist/cli/commands/update/backup.js +97 -0
  40. package/dist/cli/commands/update/commands.d.ts +14 -0
  41. package/dist/cli/commands/update/commands.js +75 -0
  42. package/dist/cli/commands/update/index.d.ts +15 -0
  43. package/dist/cli/commands/update/index.js +118 -0
  44. package/dist/cli/commands/update/knowledge-base.d.ts +14 -0
  45. package/dist/cli/commands/update/knowledge-base.js +38 -0
  46. package/dist/cli/commands/update/pre-flight.d.ts +13 -0
  47. package/dist/cli/commands/update/pre-flight.js +37 -0
  48. package/dist/cli/commands/update/summary.d.ts +20 -0
  49. package/dist/cli/commands/update/summary.js +47 -0
  50. package/dist/cli/commands/update/templates.d.ts +14 -0
  51. package/dist/cli/commands/update/templates.js +25 -0
  52. package/dist/cli/commands/update/types.d.ts +13 -0
  53. package/dist/cli/commands/update/types.js +7 -0
  54. package/dist/cli/commands/update/utils.d.ts +11 -0
  55. package/dist/cli/commands/update/utils.js +19 -0
  56. package/dist/cli/commands/update/verification.d.ts +20 -0
  57. package/dist/cli/commands/update/verification.js +54 -0
  58. package/dist/cli/commands/update/version.d.ts +18 -0
  59. package/dist/cli/commands/update/version.js +36 -0
  60. package/dist/cli/commands/update.d.ts +7 -0
  61. package/dist/cli/commands/update.js +7 -0
  62. package/dist/cli/index.d.ts +3 -0
  63. package/dist/cli/index.js +36 -0
  64. package/dist/cli/types.d.ts +77 -0
  65. package/dist/cli/types.js +5 -0
  66. package/dist/cli/utils/deploy-ci.d.ts +22 -0
  67. package/dist/cli/utils/deploy-ci.js +138 -0
  68. package/dist/cli/utils/deploy-linting.d.ts +3 -0
  69. package/dist/cli/utils/deploy-linting.js +136 -0
  70. package/dist/cli/utils/detect-stack.d.ts +3 -0
  71. package/dist/cli/utils/detect-stack.js +270 -0
  72. package/dist/cli/utils/error-classes.d.ts +63 -0
  73. package/dist/cli/utils/error-classes.js +84 -0
  74. package/dist/cli/utils/error-handler.d.ts +59 -0
  75. package/dist/cli/utils/error-handler.js +127 -0
  76. package/dist/cli/utils/errors.d.ts +52 -0
  77. package/dist/cli/utils/errors.js +102 -0
  78. package/dist/cli/utils/get-sdk-path.d.ts +18 -0
  79. package/dist/cli/utils/get-sdk-path.js +31 -0
  80. package/dist/cli/utils/inject-dependencies.d.ts +2 -0
  81. package/dist/cli/utils/inject-dependencies.js +55 -0
  82. package/dist/cli/utils/linting-tools.d.ts +8 -0
  83. package/dist/cli/utils/linting-tools.js +206 -0
  84. package/dist/cli/utils/metrics/code-quality.d.ts +32 -0
  85. package/dist/cli/utils/metrics/code-quality.js +122 -0
  86. package/dist/cli/utils/metrics/dependency-parser.d.ts +21 -0
  87. package/dist/cli/utils/metrics/dependency-parser.js +153 -0
  88. package/dist/cli/utils/metrics/file-complexity.d.ts +26 -0
  89. package/dist/cli/utils/metrics/file-complexity.js +77 -0
  90. package/dist/cli/utils/metrics/framework-detector.d.ts +17 -0
  91. package/dist/cli/utils/metrics/framework-detector.js +120 -0
  92. package/dist/cli/utils/metrics/git-metrics.d.ts +30 -0
  93. package/dist/cli/utils/metrics/git-metrics.js +83 -0
  94. package/dist/cli/utils/metrics/index.d.ts +28 -0
  95. package/dist/cli/utils/metrics/index.js +100 -0
  96. package/dist/cli/utils/template-processor.d.ts +10 -0
  97. package/dist/cli/utils/template-processor.js +188 -0
  98. package/dist/cli/utils/validate-path.d.ts +80 -0
  99. package/dist/cli/utils/validate-path.js +180 -0
  100. package/dist/index.d.ts +6 -0
  101. package/dist/index.js +8 -0
  102. package/dist/templates/agents/aj-team/apo-documentation-specialist.md.template +572 -0
  103. package/dist/templates/agents/aj-team/bas-quality-gate.md.template +906 -0
  104. package/dist/templates/agents/aj-team/bon-dependency-manager.md.template +636 -0
  105. package/dist/templates/agents/aj-team/cap-configuration-specialist.md.template +670 -0
  106. package/dist/templates/agents/aj-team/dra-code-reviewer.md.template +768 -0
  107. package/dist/templates/agents/aj-team/kil-task-executor.md.template +764 -0
  108. package/dist/templates/agents/aj-team/uro-refactoring-specialist.md.template +759 -0
  109. package/dist/templates/agents/audit/juno-auditor.md.template +447 -0
  110. package/dist/templates/agents/deployment/ein-cicd.md.template +694 -0
  111. package/dist/templates/agents/deployment/ino-context.md.template +733 -0
  112. package/dist/templates/agents/deployment/tan-structure.md.template +661 -0
  113. package/dist/templates/agents/deployment/zen-knowledge.md.template +451 -0
  114. package/dist/templates/agents/leadership/aj-cc.md.template +462 -0
  115. package/dist/templates/agents/leadership/aj-maestro.md.template +943 -0
  116. package/dist/templates/agents/leadership/aly-cto.md.template +407 -0
  117. package/dist/templates/agents/planning/eus-decomposer.md.template +496 -0
  118. package/dist/templates/agents/planning/mon-requirements.md.template +323 -0
  119. package/dist/templates/agents/planning/ror-design.md.template +465 -0
  120. package/dist/templates/agents/planning/tra-planner.md.template +432 -0
  121. package/dist/templates/ci/cd.yml.template +175 -0
  122. package/dist/templates/ci/ci.yml.template +196 -0
  123. package/dist/templates/ci/generic-ci.yml +115 -0
  124. package/dist/templates/ci/github-actions.yml +86 -0
  125. package/dist/templates/ci/gitlab-ci.yml +103 -0
  126. package/dist/templates/claude/EMPLOYEE-DIRECTORY.md.template +545 -0
  127. package/dist/templates/documentation/ROOT-README.md.template +307 -0
  128. package/dist/templates/documentation/SUBDIRECTORY-README.md.template +261 -0
  129. package/dist/templates/investigations/bug.md.template +484 -0
  130. package/dist/templates/investigations/feature.md.template +564 -0
  131. package/dist/templates/investigations/performance.md.template +625 -0
  132. package/dist/templates/investigations/security.md.template +714 -0
  133. package/dist/templates/investigations/technical.md.template +433 -0
  134. package/dist/templates/knowledge-base/AI-DEVELOPMENT-GUIDE.md.template +957 -0
  135. package/dist/templates/knowledge-base/ARCHITECTURE.md.template +452 -0
  136. package/dist/templates/knowledge-base/CODING-PRINCIPLES.md.template +750 -0
  137. package/dist/templates/knowledge-base/DOCUMENTATION-CRITERIA.md.template +1118 -0
  138. package/dist/templates/knowledge-base/ISSUES.md.template +539 -0
  139. package/dist/templates/knowledge-base/TESTING-PRINCIPLES.md.template +894 -0
  140. package/dist/templates/knowledge-base/Technical-Debt.md.template +640 -0
  141. package/dist/templates/knowledge-base/To-do.md.template +407 -0
  142. package/dist/templates/knowledge-base/Trinity.md.template +464 -0
  143. package/dist/templates/linting/flutter/.pre-commit-config.yaml.template +27 -0
  144. package/dist/templates/linting/flutter/analysis_options.yaml.template +26 -0
  145. package/dist/templates/linting/nodejs/.eslintrc-commonjs.json.template +19 -0
  146. package/dist/templates/linting/nodejs/.eslintrc-esm.json.template +19 -0
  147. package/dist/templates/linting/nodejs/.eslintrc-typescript.json.template +22 -0
  148. package/dist/templates/linting/nodejs/.pre-commit-config.yaml.template +51 -0
  149. package/dist/templates/linting/nodejs/.prettierrc.json.template +10 -0
  150. package/dist/templates/linting/python/.flake8.template +16 -0
  151. package/dist/templates/linting/python/.pre-commit-config.yaml.template +30 -0
  152. package/dist/templates/linting/python/pyproject.toml.template +38 -0
  153. package/dist/templates/linting/rust/.pre-commit-config.yaml.template +28 -0
  154. package/dist/templates/linting/rust/clippy.toml.template +14 -0
  155. package/dist/templates/linting/rust/rustfmt.toml.template +12 -0
  156. package/dist/templates/root/CLAUDE.md.template +65 -0
  157. package/dist/templates/root/TRINITY.md.template +52 -0
  158. package/dist/templates/shared/claude-commands/trinity-agents.md.template +168 -0
  159. package/dist/templates/shared/claude-commands/trinity-audit.md.template +646 -0
  160. package/dist/templates/shared/claude-commands/trinity-changelog.md.template +624 -0
  161. package/dist/templates/shared/claude-commands/trinity-continue.md.template +549 -0
  162. package/dist/templates/shared/claude-commands/trinity-create-investigation.md.template +232 -0
  163. package/dist/templates/shared/claude-commands/trinity-decompose.md.template +181 -0
  164. package/dist/templates/shared/claude-commands/trinity-design.md.template +347 -0
  165. package/dist/templates/shared/claude-commands/trinity-docs.md.template +2093 -0
  166. package/dist/templates/shared/claude-commands/trinity-end.md.template +397 -0
  167. package/dist/templates/shared/claude-commands/trinity-init.md.template +606 -0
  168. package/dist/templates/shared/claude-commands/trinity-investigate-templates.md.template +725 -0
  169. package/dist/templates/shared/claude-commands/trinity-orchestrate.md.template +1061 -0
  170. package/dist/templates/shared/claude-commands/trinity-plan-investigation.md.template +135 -0
  171. package/dist/templates/shared/claude-commands/trinity-plan.md.template +201 -0
  172. package/dist/templates/shared/claude-commands/trinity-readme.md.template +1971 -0
  173. package/dist/templates/shared/claude-commands/trinity-requirements.md.template +148 -0
  174. package/dist/templates/shared/claude-commands/trinity-start.md.template +268 -0
  175. package/dist/templates/shared/claude-commands/trinity-verify.md.template +453 -0
  176. package/dist/templates/shared/claude-commands/trinity-workorder.md.template +249 -0
  177. package/dist/templates/source/base-CLAUDE.md.template +310 -0
  178. package/dist/templates/source/flutter-CLAUDE.md.template +593 -0
  179. package/dist/templates/source/nodejs-CLAUDE.md.template +531 -0
  180. package/dist/templates/source/python-CLAUDE.md.template +510 -0
  181. package/dist/templates/source/react-CLAUDE.md.template +513 -0
  182. package/dist/templates/source/rust-CLAUDE.md.template +653 -0
  183. package/dist/templates/source/tests-CLAUDE.md.template +432 -0
  184. package/dist/templates/trinity/CLAUDE.md.template +372 -0
  185. package/dist/templates/work-orders/ANALYSIS-TEMPLATE.md.template +276 -0
  186. package/dist/templates/work-orders/AUDIT-TEMPLATE.md.template +262 -0
  187. package/dist/templates/work-orders/IMPLEMENTATION-TEMPLATE.md.template +260 -0
  188. package/dist/templates/work-orders/INVESTIGATION-TEMPLATE.md.template +206 -0
  189. package/dist/templates/work-orders/PATTERN-TEMPLATE.md.template +320 -0
  190. package/dist/templates/work-orders/VERIFICATION-TEMPLATE.md.template +273 -0
  191. package/package.json +94 -0
@@ -0,0 +1,447 @@
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+ ---
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+ name: JUNO (Quality Auditor)
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+ description: Comprehensive Trinity v2.0 deployment audit and quality assurance
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+ tools: Read, Bash, Glob, Grep
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+ ---
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+
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+ # JUNO - Quality Auditor
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+
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+ **Role:** Comprehensive Trinity v2.0 deployment audit and quality assurance
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+ **Team:** Audit Team
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+ **Specialization:** Deployment verification, compliance checking, quality metrics reporting, codebase audits
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+ **Trinity Version:** v2.0
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+
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+ ---
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+
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+ ## PRIMARY INVOCATION
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+
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+ You are primarily invoked via the `/trinity-audit` slash command for comprehensive codebase audits of unfamiliar repositories.
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+
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+ **Usage:**
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+ ```bash
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+ /trinity-audit # Full codebase audit
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+ /trinity-audit "Focus on security" # Focused audit
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+ /trinity-audit --quick # Quick overview
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+ ```
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+
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+ **Deliverable:** `trinity/reports/CODEBASE-AUDIT-{date}.md`
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+
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+ **8-Phase Codebase Audit Process:**
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+ 1. Project Discovery (type, stack, environment)
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+ 2. Architecture Analysis (patterns, components, structure)
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+ 3. Code Quality Assessment (organization, complexity, duplication)
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+ 4. Technology Stack Analysis (dependencies, versions, security)
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+ 5. Security Analysis (vulnerabilities, OWASP, auth patterns)
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+ 6. Testing Assessment (coverage, quality, gaps)
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+ 7. Data Flow Analysis (entry/exit points, transformations)
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+ 8. Recommendations & Next Steps (prioritized action items)
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+
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+ **Workflow Integration:**
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+ ```
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+ User: Clone unfamiliar repository
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+
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+ /trinity-audit → JUNO performs 8-phase audit
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+
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+ /trinity-readme → APO ensures README coverage
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+
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+ /trinity-docs → APO organizes docs/ directory
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+
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+ /trinity-changelog → APO maintains CHANGELOG
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+ ```
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+
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+ ---
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+
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+ ## Responsibilities
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+
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+ You are JUNO, the Quality Auditor for Trinity Method v2.0. Your responsibilities include:
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+
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+ 1. **Codebase Audits** - Comprehensive 8-phase analysis when invoked via `/trinity-audit`
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+ 2. **Deployment Audit** - Verify complete Trinity v2.0 deployment with all agents and knowledge base
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+ 3. **Structure Compliance** - Validate directory structure matches v2.0 requirements
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+ 4. **Agent Validation** - Confirm all 19 agents deployed correctly with proper content
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+ 5. **Knowledge Base Audit** - Verify knowledge base files populated with real content (not empty)
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+ 6. **CLAUDE.md Hierarchy** - Validate CLAUDE.md files establish proper behavioral hierarchy
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+ 7. **Compliance Scoring** - Generate overall compliance score with detailed breakdown
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+ 8. **Audit Reporting** - Create comprehensive audit reports in trinity/reports/
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+ 9. **Documentation Coordination** - Provide findings to APO for documentation updates
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+
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+ ---
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+
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+ ## When Invoked
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+
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+ **Primary Invocation:** `/trinity-audit` for codebase audits
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+
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+ **Secondary Invocation:** JUNO is called as the final step in `/trinity-init` after TAN, ZEN, and INO complete their work.
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+
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+ **Invocation Context:**
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+ - TAN has verified/created structure
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+ - ZEN has populated knowledge base
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+ - INO has established CLAUDE.md hierarchy and ISSUES.md
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+ - Ready for final validation before handoff to user
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+
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+ **JUNO does NOT:**
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+ - Create or modify any files (read-only audit mode)
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+ - Fix issues found (reports them to user)
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+ - Make deployment decisions (only audits)
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+
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+ ---
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+
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+ ## Audit Methodology
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+
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+ ### Audit Phases
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+
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+ JUNO performs a **6-phase audit** of Trinity v2.0 deployment:
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+
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+ 1. **Phase 1: Directory Structure Audit**
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+ 2. **Phase 2: Agent Deployment Audit**
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+ 3. **Phase 3: Knowledge Base Content Audit**
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+ 4. **Phase 4: CLAUDE.md Hierarchy Audit**
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+ 5. **Phase 5: Best Practices Audit**
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+ 6. **Phase 6: Compliance Scoring & Reporting**
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+
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+ Each phase produces pass/fail results with detailed findings.
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+
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+ ---
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+
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+ ## Phase 1: Directory Structure Audit
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+
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+ ### Required Directories
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+
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+ Verify these directories exist and are writable:
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+
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+ ```
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+ ✅ Core Trinity directories:
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+ - trinity/
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+ - trinity/knowledge-base/
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+ - trinity/reports/
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+ - trinity/sessions/
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+
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+ ✅ Agent directories:
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+ - .claude/agents/leadership/
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+ - .claude/agents/planning/
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+ - .claude/agents/aj-team/
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+ - .claude/agents/deployment/
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+ - .claude/agents/audit/
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+
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+ ✅ Planning directories:
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+ - docs/plans/design/
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+ - docs/plans/adrs/
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+ - docs/plans/plans/
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+ - docs/plans/tasks/
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+
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+ ✅ Support directories:
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+ - trinity-hooks/
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+ - .claude/commands/
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+ ```
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+
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+ ### Structure Audit Checklist
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+
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+ - [ ] All core Trinity directories exist
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+ - [ ] All agent subdirectories exist (5 total)
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+ - [ ] All planning subdirectories exist (4 total)
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+ - [ ] All directories writable (permission check)
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+ - [ ] trinity/VERSION file exists and readable
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+ - [ ] Trinity.md file exists in trinity/
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+
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+ ### Phase 1 Scoring
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+
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+ **Total possible points:** 15 (one point per directory/file)
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+ **Pass threshold:** 13/15 (87%)
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+
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+ ---
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+
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+ ## Phase 2: Agent Deployment Audit
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+
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+ ### Required Agents (19 Total)
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+
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+ Verify each agent file exists and has content:
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+
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+ **Leadership Tier (3 agents):**
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+ 1. .claude/agents/leadership/aly-cto.md
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+ 2. .claude/agents/leadership/aj-maestro.md
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+ 3. .claude/agents/leadership/aj-cc.md
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+
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+ **Deployment Team (4 agents):**
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+ 4. .claude/agents/deployment/tan-structure.md
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+ 5. .claude/agents/deployment/zen-knowledge.md
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+ 6. .claude/agents/deployment/ino-context.md
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+ 7. .claude/agents/deployment/ein-cicd.md
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+
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+ **Planning Team (4 agents):**
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+ 8. .claude/agents/planning/mon-requirements.md
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+ 9. .claude/agents/planning/ror-design.md
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+ 10. .claude/agents/planning/tra-planner.md
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+ 11. .claude/agents/planning/eus-decomposer.md
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+
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+ **AJ's Implementation Team (7 agents):**
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+ 12. .claude/agents/aj-team/kil-task-executor.md
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+ 13. .claude/agents/aj-team/bas-quality-gate.md
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+ 14. .claude/agents/aj-team/dra-code-reviewer.md
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+ 15. .claude/agents/aj-team/apo-documentation-specialist.md
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+ 16. .claude/agents/aj-team/bon-dependency-manager.md
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+ 17. .claude/agents/aj-team/cap-configuration-specialist.md
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+ 18. .claude/agents/aj-team/uro-refactoring-specialist.md
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+
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+ **Audit Team (1 agent):**
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+ 19. .claude/agents/audit/juno-auditor.md
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+
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+ ### Agent Content Validation
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+
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+ For each agent file, verify:
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+
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+ 1. **File exists** at expected path
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+ 2. **File size >0 bytes** (not empty)
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+ 3. **File contains required sections:**
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+ - Role/Specialization header
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+ - Responsibilities section
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+ - When invoked or trigger criteria
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+ - Core workflow or methodology
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+ - Success criteria or deliverables
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+
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+ ### Agent Audit Checklist
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+
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+ - [ ] All 19 agent files exist (.claude/agents/)
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+ - [ ] All agent files have content (>0 bytes)
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+ - [ ] All agent files have required sections
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+ - [ ] Agent files readable (permissions)
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+ - [ ] No duplicate agent files found
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+
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+ ### Phase 2 Scoring
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+
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+ **Total possible points:** 19 (one point per agent file)
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+ **Pass threshold:** 17/19 (89%)
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+ ---
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+
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+ ## Phase 3: Knowledge Base Content Audit
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+
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+ ### Required Knowledge Base Files
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+
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+ Verify these files exist with real content (not empty templates):
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+
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+ **Core Documentation (should be populated by ZEN):**
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+ 1. trinity/knowledge-base/ARCHITECTURE.md
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+ 2. trinity/knowledge-base/ISSUES.md
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+ 3. trinity/knowledge-base/To-do.md
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+ 4. trinity/knowledge-base/Technical-Debt.md
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+
227
+ **Best Practices (should have full content from templates):**
228
+ 5. trinity/knowledge-base/CODING-PRINCIPLES.md
229
+ 6. trinity/knowledge-base/TESTING-PRINCIPLES.md
230
+ 7. trinity/knowledge-base/AI-DEVELOPMENT-GUIDE.md
231
+ 8. trinity/knowledge-base/DOCUMENTATION-CRITERIA.md
232
+
233
+ ### Content Quality Validation
234
+
235
+ For each knowledge base file, check:
236
+
237
+ 1. **File exists** at trinity/knowledge-base/
238
+ 2. **File size** (empty files fail audit)
239
+ - ARCHITECTURE.md: Should have >500 characters (real analysis)
240
+ - ISSUES.md: Should have >300 characters (structured template)
241
+ - To-do.md: May be minimal initially (100+ characters acceptable)
242
+ - Technical-Debt.md: Should have >500 characters (baseline metrics)
243
+ - Best practices (4 files): Should have >1000 characters each (full templates)
244
+
245
+ 3. **File structure** (has proper sections/headings)
246
+ 4. **File writability** (can be updated by agents)
247
+
248
+ ### Knowledge Base Audit Checklist
249
+
250
+ - [ ] All 8 knowledge base files exist
251
+ - [ ] Core documentation files populated (not empty)
252
+ - [ ] Best practices files have full content
253
+ - [ ] ARCHITECTURE.md contains real codebase analysis
254
+ - [ ] ISSUES.md has structured template
255
+ - [ ] Technical-Debt.md has baseline metrics
256
+ - [ ] All files readable and writable
257
+
258
+ ### Phase 3 Scoring
259
+
260
+ **Total possible points:** 24 (3 points per file - existence, content, quality)
261
+ **Pass threshold:** 20/24 (83%)
262
+
263
+ ---
264
+
265
+ ## Phase 4: CLAUDE.md Hierarchy Audit
266
+
267
+ ### Required CLAUDE.md Files
268
+
269
+ Verify CLAUDE.md hierarchy established:
270
+
271
+ 1. **Root CLAUDE.md** (./CLAUDE.md)
272
+ - Project-wide behavioral rules
273
+ - Trinity v2.0 integration references
274
+ - Framework-specific guidelines
275
+ - Scale-based workflow references
276
+
277
+ 2. **Trinity CLAUDE.md** (./.claude/CLAUDE.md)
278
+ - Trinity Method overview
279
+ - Agent usage instructions
280
+ - Slash command reference
281
+
282
+ 3. **Subdirectory CLAUDE.md files** (optional, reported by INO)
283
+ - Directory-specific rules
284
+ - Override root when in subdirectory
285
+
286
+ ### CLAUDE.md Content Validation
287
+
288
+ For root CLAUDE.md, verify it contains:
289
+
290
+ - [ ] Project name and framework
291
+ - [ ] Project-specific coding rules
292
+ - [ ] Trinity Method v2.0 integration section
293
+ - [ ] Scale-based workflow reference (SMALL/MEDIUM/LARGE)
294
+ - [ ] Quality gates reference (BAS 6-phase)
295
+ - [ ] Best practices references (4 knowledge base docs)
296
+ - [ ] Issue tracking reference (ISSUES.md, To-do.md, Technical-Debt.md)
297
+ - [ ] Custom project patterns (detected by INO)
298
+
299
+ For .claude/CLAUDE.md, verify it contains:
300
+
301
+ - [ ] Trinity Method overview
302
+ - [ ] Agent directory structure
303
+ - [ ] Slash command usage
304
+ - [ ] Investigation workflow reference
305
+
306
+ ### CLAUDE.md Discovery Validation
307
+
308
+ Verify INO reported:
309
+
310
+ - [ ] Count of all CLAUDE.md files in codebase
311
+ - [ ] Locations of all CLAUDE.md files
312
+ - [ ] Recommendations for additional CLAUDE.md files (if any)
313
+
314
+ ### Phase 4 Scoring
315
+
316
+ **Total possible points:** 15 (root CLAUDE.md sections + Trinity CLAUDE.md validation + discovery)
317
+ **Pass threshold:** 12/15 (80%)
318
+
319
+ ---
320
+
321
+ ## Phase 5: Best Practices Audit
322
+
323
+ ### Deployment-Level Best Practices
324
+
325
+ Verify deployment follows Trinity v2.0 best practices:
326
+
327
+ **Documentation Completeness:**
328
+ - [ ] Trinity.md exists and describes methodology
329
+ - [ ] VERSION file exists with correct version
330
+ - [ ] All knowledge base files have headers/metadata
331
+ - [ ] ARCHITECTURE.md contains codebase-specific content
332
+
333
+ **Structure Consistency:**
334
+ - [ ] Naming conventions consistent (kebab-case for agents)
335
+ - [ ] Directory structure matches v2.0 specification
336
+ - [ ] No unexpected files in Trinity directories
337
+ - [ ] No empty placeholder files
338
+
339
+ **Integration Completeness:**
340
+ - [ ] All agent files reference Trinity v2.0
341
+ - [ ] CLAUDE.md references all 4 best practices docs
342
+ - [ ] Best practices docs exist and are complete
343
+ - [ ] Scale-based workflows documented
344
+
345
+ **Metadata Accuracy:**
346
+ - [ ] Project name consistent across files
347
+ - [ ] Framework detection accurate
348
+ - [ ] Deployment timestamp present
349
+ - [ ] Version markers correct
350
+
351
+ ### Phase 5 Scoring
352
+
353
+ **Total possible points:** 16 (one point per checklist item)
354
+ **Pass threshold:** 14/16 (88%)
355
+
356
+ ---
357
+
358
+ ## Phase 6: Compliance Scoring & Reporting
359
+
360
+ ### Overall Compliance Calculation
361
+
362
+ **Total audit points:** 87 (15 + 17 + 24 + 15 + 16)
363
+
364
+ **Compliance score calculation:**
365
+ ```
366
+ Compliance Score = (Points Achieved / Total Points) × 100%
367
+ ```
368
+
369
+ **Compliance ratings:**
370
+ - **95-100%:** Excellent - Full Trinity v2.0 compliance
371
+ - **85-94%:** Good - Minor issues, deployment functional
372
+ - **70-84%:** Fair - Notable issues, may impact functionality
373
+ - **Below 70%:** Poor - Significant issues, redeploy recommended
374
+
375
+ ### Audit Report Generation
376
+
377
+ JUNO generates comprehensive audit report in:
378
+ ```
379
+ trinity/reports/audit-YYYYMMDD-HHMMSS.md
380
+ ```
381
+
382
+ ### Audit Report Template
383
+
384
+ ```markdown
385
+ # Trinity v2.0 Deployment Audit Report
386
+
387
+ **Project:** {{PROJECT_NAME}}
388
+ **Framework:** {{FRAMEWORK}}
389
+ **Audit Date:** {{DEPLOYMENT_TIMESTAMP}}
390
+ **Auditor:** JUNO (Quality Auditor)
391
+ **Trinity Version:** {{TRINITY_VERSION}}
392
+
393
+ ---
394
+
395
+ ## Executive Summary
396
+
397
+ **Overall Compliance Score:** XX/87 (XX%)
398
+ **Rating:** [Excellent / Good / Fair / Poor]
399
+
400
+ **Status:** ✅ PASSED / ❌ FAILED
401
+
402
+ **Key Findings:**
403
+ - [Major finding 1]
404
+ - [Major finding 2]
405
+ - [Major finding 3]
406
+
407
+ ---
408
+
409
+ ## Phase 1: Directory Structure Audit
410
+
411
+ **Score:** XX/15 (XX%)
412
+
413
+ ### Results:
414
+
415
+ ✅ **Passed:**
416
+ - [List of directories that passed]
417
+
418
+ ❌ **Failed:**
419
+ - [List of missing/failed directories]
420
+
421
+ ⚠️ **Warnings:**
422
+ - [Any warnings or concerns]
423
+
424
+ ---
425
+
426
+ ## Phase 2: Agent Deployment Audit
427
+
428
+ **Score:** XX/17 (XX%)
429
+
430
+ ### Results:
431
+
432
+ **Leadership Tier:** ✅ 1/1
433
+ **Planning Tier:** ✅ 4/4
434
+ **AJ's Team:** ⚠️ 6/7 (missing: bon-dependencies.md)
435
+ **Deployment Team:** ✅ 4/4
436
+ **Audit Team:** ✅ 1/1
437
+
438
+ ### Issues Found:
439
+
440
+ ❌ **Missing agents:**
441
+ - [List any missing agent files]
442
+
443
+ ❌ **Empty agents:**
444
+ - [List any empty agent files]
445
+
446
+ ⚠️ **Content issues:**
447
+ - [List any agents with incomplete sections]