trace-to-skill 0.1.77 → 0.1.78

package/README.md

@@ -59,7 +59,7 @@ Use it when you need to:
 - **Harden agent instructions:** run `trace-to-skill lint-agents .` to catch missing `AGENTS.md`, conflicting tool instructions, missing includes, nested instruction drift, encoding issues, and risky MCP config.
 - **Protect agent context:** run `trace-to-skill guard-github-event "$GITHUB_EVENT_PATH"` before feeding issue, PR, comment, discussion, check-run, or commit text into an agent.
 - **Prevent unsafe patch overwrites:** run `trace-to-skill guard-patch ./change.patch --root .` before applying generated patches so `*** Add File` cannot silently replace an existing file or symlink target.
-- **Audit local Codex session history:** run `trace-to-skill session-audit ~/.codex --format json` to summarize rollout JSONL sizes, huge lines, parse errors, state files, short `session_index.jsonl` evidence, bloated transcript-like sidebar titles, and recoverable unindexed thread ids without publishing private transcripts.
+- **Audit local Codex session history:** run `trace-to-skill session-audit ~/.codex --format json` to summarize rollout JSONL sizes, huge lines, parse errors, state files, short `session_index.jsonl` evidence, bloated transcript-like sidebar titles, subagent lifecycle signals, and recoverable unindexed thread ids without publishing private transcripts.
 - **Preflight sensitive paths before agent runs:** run `trace-to-skill sensitive-audit . --format json` to find `.env`, private keys, package auth files, cloud credentials, local databases, signing files, and secret manifests by filename/path without reading file contents. Add `--format ignore --ignore-target codexignore` to generate a reviewable `.codexignore` candidate without mutating the repo.
 - **Preflight language-server readiness:** run `trace-to-skill lsp-audit . --format json` to detect repo languages, missing LSP commands, install hints, and evidence files before asking Codex for symbol-aware edits.
 - **Audit Codex config drift:** run `trace-to-skill config-audit ~/.codex --format json` to summarize legacy profile config, model pins, Speed/Fast service-tier persistence drift, sandbox/approval posture, Windows elevated sandbox mode, missing permission profiles, plugin cache drift, and MCP approval sprawl.
@@ -503,7 +503,7 @@ jobs:
       issues: write
     steps:
       - uses: actions/checkout@v5
-      - uses: grnbtqdbyx-create/trace-to-skill@v0.1.77
+      - uses: grnbtqdbyx-create/trace-to-skill@v0.1.78
         with:
           mode: all
           doctor-threshold: "85"
@@ -552,7 +552,7 @@ Composite action usage:
 
 ```yaml
 - id: trace-to-skill
-  uses: grnbtqdbyx-create/trace-to-skill@v0.1.77
+  uses: grnbtqdbyx-create/trace-to-skill@v0.1.78
   with:
     mode: all
     doctor-threshold: "85"
@@ -594,7 +594,7 @@ Action outputs:
 
 By default, generated reports are also appended to the GitHub Actions Job Summary. Set `job-summary: "false"` to disable that UI output.
 
-Tagged Action releases build and run the CLI from `$GITHUB_ACTION_PATH`, so a workflow pinned to a release tag such as `@v0.1.77` executes that release's checked-out source instead of pulling the default branch at runtime.
+Tagged Action releases build and run the CLI from `$GITHUB_ACTION_PATH`, so a workflow pinned to a release tag such as `@v0.1.78` executes that release's checked-out source instead of pulling the default branch at runtime.
 
 ## Codex Skill
 

package/dist/src/index.d.ts

@@ -26,7 +26,7 @@ export { redactTargets, redactText } from "./redact.js";
 export { renderAgentsRules, renderCodexIssueReport, renderComparison, renderDoctorMarkdown, renderDoctorPrComment, renderMarkdown, renderPrComment, renderSarif, renderSkill } from "./report.js";
 export { renderScorecardMarkdown, renderScorecardPrComment, runScorecard } from "./scorecard.js";
 export { auditCodexSessions, renderSessionAuditMarkdown } from "./sessionAudit.js";
-export type { SessionAuditFile, SessionAuditFinding, SessionAuditOptions, SessionAuditResult, SessionAuditSeverity, SessionAuditStateFile, SessionAuditStatus } from "./sessionAudit.js";
+export type { SessionAuditFile, SessionAuditFinding, SessionAuditOptions, SessionAuditResult, SessionAuditSeverity, SessionAuditStateFile, SessionAuditStatus, SessionAuditSubagentSignal, SessionAuditSubagentSignalKind } from "./sessionAudit.js";
 export { auditSensitivePaths, buildSensitiveIgnoreFiles, normalizeSensitiveIgnoreTarget, renderSensitiveAuditMarkdown, renderSensitiveIgnoreFile } from "./sensitiveAudit.js";
 export type { SensitiveAuditFinding, SensitiveAuditFindingKind, SensitiveAuditResult, SensitiveAuditSeverity, SensitiveAuditStatus, SensitiveIgnoreFile, SensitiveIgnoreTarget } from "./sensitiveAudit.js";
 export { buildUsageEvidence, buildUsageEvidenceFromInputs, renderUsageEvidenceMarkdown } from "./usageEvidence.js";

package/dist/src/sessionAudit.d.ts

@@ -1,5 +1,6 @@
 export type SessionAuditStatus = "pass" | "warn" | "fail";
 export type SessionAuditSeverity = "warning" | "error";
+export type SessionAuditSubagentSignalKind = "spawn_agent" | "wait_agent" | "close_agent" | "thread_spawn_edges" | "agent_thread_limit" | "stale_subagent_ui" | "child_recent_thread" | "compaction_lost_subagents" | "no_agents_completed" | "subagent_notification";
 export interface SessionAuditOptions {
     largeFileBytes?: number;
     hugeLineBytes?: number;
@@ -30,10 +31,16 @@ export interface SessionAuditStateFile {
 }
 export interface SessionAuditFinding {
     severity: SessionAuditSeverity;
-    kind: "large_rollout" | "huge_jsonl_line" | "json_parse_error" | "short_session_index" | "unindexed_rollout_thread" | "bloated_index_title" | "state_file_present";
+    kind: "large_rollout" | "huge_jsonl_line" | "json_parse_error" | "short_session_index" | "unindexed_rollout_thread" | "bloated_index_title" | "subagent_lifecycle_signal" | "state_file_present";
     path?: string;
     message: string;
 }
+export interface SessionAuditSubagentSignal {
+    path: string;
+    kind: SessionAuditSubagentSignalKind;
+    count: number;
+    note: string;
+}
 export interface SessionAuditThread {
     id: string;
     path: string;
@@ -70,10 +77,13 @@ export interface SessionAuditResult {
         indexedThreads: number;
         unindexedRolloutThreads: number;
         bloatedIndexTitles: number;
+        subagentSignalFiles: number;
+        subagentSignals: number;
         projectRoots: number;
     };
     files: SessionAuditFile[];
     threads: SessionAuditThread[];
+    subagentSignals: SessionAuditSubagentSignal[];
     stateFiles: SessionAuditStateFile[];
     findings: SessionAuditFinding[];
 }

package/dist/src/sessionAudit.js

@@ -22,8 +22,9 @@ export async function auditCodexSessions(target = defaultCodexHome(), options =
     const sessionIndex = files.find((file) => path.basename(file.path) === "session_index.jsonl");
     const indexEntries = sessionIndex ? await readSessionIndex(path.join(root, sessionIndex.path)) : new Map();
     const threads = buildThreads(files, indexEntries);
+    const subagentSignals = buildSubagentSignals(files);
     const stateFiles = await Promise.all(discovered.stateFiles.map((file) => stateFileInfo(file, root)));
-    const findings = buildFindings(files, threads, stateFiles, thresholds);
+    const findings = buildFindings(files, threads, subagentSignals, stateFiles, thresholds);
     const rolloutFiles = files.filter((file) => path.basename(file.path).startsWith("rollout-")).length;
     const projectKeys = new Set(threads.map((thread) => thread.cwdHash).filter(Boolean));
     const summary = {
@@ -38,6 +39,8 @@ export async function auditCodexSessions(target = defaultCodexHome(), options =
         indexedThreads: threads.filter((thread) => thread.indexed).length,
         unindexedRolloutThreads: threads.filter((thread) => !thread.indexed).length,
         bloatedIndexTitles: threads.filter((thread) => (thread.indexTitleSignals?.length ?? 0) > 0).length,
+        subagentSignalFiles: new Set(subagentSignals.map((signal) => signal.path)).size,
+        subagentSignals: subagentSignals.reduce((sum, signal) => sum + signal.count, 0),
         projectRoots: projectKeys.size
     };
     return {
@@ -48,6 +51,7 @@ export async function auditCodexSessions(target = defaultCodexHome(), options =
         summary,
         files: files.sort((a, b) => b.sizeBytes - a.sizeBytes),
         threads,
+        subagentSignals,
         stateFiles,
         findings
     };
@@ -69,6 +73,8 @@ export function renderSessionAuditMarkdown(result) {
         `Indexed threads: ${result.summary.indexedThreads}`,
         `Unindexed rollout threads: ${result.summary.unindexedRolloutThreads}`,
         `Bloated index titles: ${result.summary.bloatedIndexTitles}`,
+        `Subagent lifecycle signal files: ${result.summary.subagentSignalFiles}`,
+        `Subagent lifecycle signals: ${result.summary.subagentSignals}`,
         ""
     ];
     if (result.findings.length > 0) {
@@ -105,6 +111,24 @@ export function renderSessionAuditMarkdown(result) {
         lines.push("");
         lines.push("This table intentionally avoids printing full workspace paths. `cwdHash` is a short hash of the original path so related threads can be grouped without exposing local directories.", "");
     }
+    lines.push("## Subagent Lifecycle Signals", "");
+    if (result.subagentSignals.length === 0) {
+        lines.push("No subagent lifecycle signals found in rollout JSONL files.", "");
+    }
+    else {
+        lines.push("| File | Signal | Count | Note |");
+        lines.push("| --- | --- | ---: | --- |");
+        for (const signal of result.subagentSignals.slice(0, 25)) {
+            lines.push([
+                `\`${signal.path}\``,
+                `\`${signal.kind}\``,
+                `${signal.count}`,
+                signal.note
+            ].map(escapeCell).join(" | ").replace(/^/, "| ").replace(/$/, " |"));
+        }
+        lines.push("");
+        lines.push("This section prints only coarse signal names and counts, not raw private transcript lines.", "");
+    }
     lines.push("## Largest JSONL Files", "");
     const largest = result.files.slice(0, 10);
     if (largest.length === 0) {
@@ -212,7 +236,7 @@ async function stateFileInfo(filePath, root) {
         present: true
     };
 }
-function buildFindings(files, threads, stateFiles, thresholds) {
+function buildFindings(files, threads, subagentSignals, stateFiles, thresholds) {
     const findings = [];
     const rolloutFiles = files.filter((file) => path.basename(file.path).startsWith("rollout-"));
     const sessionIndex = files.find((file) => path.basename(file.path) === "session_index.jsonl");
@@ -268,6 +292,14 @@ function buildFindings(files, threads, stateFiles, thresholds) {
             message: `Thread ${thread.id} has a risky session_index title (${thread.indexTitleBytes ?? 0} bytes; ${(thread.indexTitleSignals ?? []).join(", ")}). Large transcript-like titles can make Desktop sidebar/search caches hide or mis-render otherwise recoverable threads.`
         });
     }
+    for (const signal of subagentSignals.filter((item) => isSubagentWarningSignal(item.kind)).slice(0, 10)) {
+        findings.push({
+            severity: "warning",
+            kind: "subagent_lifecycle_signal",
+            path: signal.path,
+            message: `${signal.kind} appeared ${signal.count} time(s). ${signal.note}`
+        });
+    }
     for (const stateFile of stateFiles.filter((file) => file.path.endsWith(".sqlite"))) {
         findings.push({
             severity: "warning",
@@ -278,6 +310,24 @@ function buildFindings(files, threads, stateFiles, thresholds) {
     }
     return findings;
 }
+function buildSubagentSignals(files) {
+    const signals = [];
+    for (const file of files) {
+        for (const kind of SUBAGENT_SIGNAL_KINDS) {
+            const count = file.signalCounts[kind] ?? 0;
+            if (count === 0) {
+                continue;
+            }
+            signals.push({
+                path: file.path,
+                kind,
+                count,
+                note: SUBAGENT_SIGNAL_NOTES[kind]
+            });
+        }
+    }
+    return signals.sort((a, b) => a.path.localeCompare(b.path) || a.kind.localeCompare(b.kind));
+}
 async function readSessionIndex(filePath) {
     const entries = new Map();
     const input = createReadStream(filePath, { encoding: "utf8" });
@@ -360,7 +410,17 @@ function countRawSignals(line, signalCounts) {
         ["tool_call", /tool_call/g],
         ["thread_resume", /thread\/resume/g],
         ["thread_goal", /thread\/goal\/get|thread_goals/g],
-        ["item_not_found", /Item not found in turn state/g]
+        ["item_not_found", /Item not found in turn state/g],
+        ["spawn_agent", /\bspawn_agent\b/g],
+        ["wait_agent", /\bwait_agent\b/g],
+        ["close_agent", /\bclose_agent\b/g],
+        ["thread_spawn_edges", /\bthread_spawn_edges\b|\bspawn edges?\b/gi],
+        ["agent_thread_limit", /\bagent thread limit reached\b|\bagents\.max_threads\b|\bspawn quota\b/gi],
+        ["stale_subagent_ui", /\b(stale|orphan(?:ed)?|zombie)\s+subagents?\b|\bSubagents panel\b.{0,120}\b(stale|visible|shows?|listed)\b/gi],
+        ["child_recent_thread", /\bsubagent child threads?\b.{0,160}\b(top-level|recent conversations?|sidebar)\b/gi],
+        ["compaction_lost_subagents", /\bsubagents?\b.{0,160}\b(compaction|compact(?:ed|ion)?|not aware|forgot|cannot list)\b/gi],
+        ["no_agents_completed", /\bNo agents completed yet\b/g],
+        ["subagent_notification", /<subagent_notification>|\bsubagent notification\b/gi]
     ]) {
         const matches = line.match(pattern);
         if (matches) {
@@ -368,6 +428,33 @@ function countRawSignals(line, signalCounts) {
         }
     }
 }
+const SUBAGENT_SIGNAL_KINDS = [
+    "spawn_agent",
+    "wait_agent",
+    "close_agent",
+    "thread_spawn_edges",
+    "agent_thread_limit",
+    "stale_subagent_ui",
+    "child_recent_thread",
+    "compaction_lost_subagents",
+    "no_agents_completed",
+    "subagent_notification"
+];
+const SUBAGENT_SIGNAL_NOTES = {
+    spawn_agent: "Subagent spawn attempts are present; compare with wait/close and quota evidence.",
+    wait_agent: "Subagent wait/readback calls are present; stale waits can diverge from UI state.",
+    close_agent: "Subagent close calls are present; check for not_found, pending, or still-visible cards.",
+    thread_spawn_edges: "Persisted spawn-edge evidence is present; include status counts when filing lifecycle bugs.",
+    agent_thread_limit: "Spawn quota or agent thread limit evidence is present.",
+    stale_subagent_ui: "Stale or still-visible subagent UI/cache evidence is present.",
+    child_recent_thread: "Child subagent threads may be surfacing as recent/top-level conversations.",
+    compaction_lost_subagents: "Compaction or resume may have hidden prior subagent ids from the parent.",
+    no_agents_completed: "Parent/readback reported no completed agents despite subagent activity.",
+    subagent_notification: "Subagent notification events are present; compare them with wait_agent results."
+};
+function isSubagentWarningSignal(kind) {
+    return kind !== "spawn_agent" && kind !== "wait_agent";
+}
 function countParsedRecord(parsed, recordTypes, signalCounts) {
     if (!parsed || typeof parsed !== "object") {
         return;

package/dist/src/sessionAudit.js.map

@@ -1 +1 @@
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package/docs/CODEX_ISSUE_MAP.md

@@ -38,7 +38,7 @@ npx trace-to-skill lsp-audit . --format json
 | App connector auth cache and stale link regressions | `401 Reauthentication required`, `refresh token was revoked`, stale `link_*`, `isAccessible: false`, `codex_apps_tools` or `codex_app_directory` cache regeneration keeps broken connector state | `codex_connector_auth_cache` | `trace-to-skill codex-report ./runs` or `trace-to-skill demo connector-auth-cache` |
 | MCP discovery and config-scope mismatches | CLI `/mcp` works but VS Code/Desktop has no `mcp__*` tools, project `.codex/config.toml` ignored, `codex mcp get` says `No MCP server named`, WSL opens Windows `config.toml`, `CODEX_HOME` differs | `codex_mcp_discovery_mismatch` | `trace-to-skill codex-report ./runs` or `trace-to-skill demo mcp-discovery-mismatch` |
 | Terminal output and scrollback integrity failures | scrollback lines disappear, streaming output overwrites older visible transcript, complete numbered lines are missing, `missing_count`, `tmux_scrollback_repro.sh`, viewport snaps to bottom, transcript mode cannot recover output | `codex_terminal_output_integrity` | `trace-to-skill codex-report ./runs` or `trace-to-skill demo terminal-output-integrity` |
-| Subagent lifecycle and state reconciliation failures | completed/closed subagents remain visible, stale `thread_spawn_edges`, `agent thread limit reached`, `close_agent` hangs or returns `not_found`, child threads crowd recent conversations, compaction loses prior subagent IDs, forked review inherits parent context | `codex_subagent_lifecycle` | `trace-to-skill codex-report ./runs` or `trace-to-skill demo subagent-lifecycle` |
+| Subagent lifecycle and state reconciliation failures | completed/closed subagents remain visible, stale `thread_spawn_edges`, `agent thread limit reached`, `close_agent` hangs or returns `not_found`, child threads crowd recent conversations, compaction loses prior subagent IDs, forked review inherits parent context | `codex_subagent_lifecycle` plus session subagent signals | `trace-to-skill session-audit ~/.codex --format json` for local history signals, then `trace-to-skill codex-report ./runs` for redacted traces |
 | Approval persistence and MCP approval friction | `Approve for this session` is not remembered, command approval cache misses, repeated file-change approvals, `approval_policy = "never"` still prompts for MCP tools, per-tool approval configs explode | `codex_approval_friction` | `trace-to-skill codex-report ./runs` |
 | Config and Preferences drift | legacy `profile` / `[profiles.*]`, `configVersionConflict`, Preferences `Unable to save`, stale model pin, Speed/Fast resets to Standard despite persisted `service_tier`, missing `default_permissions` profile, enabled plugin cache missing, Windows elevated sandbox mode | `sandbox_permission`, `codex_plugin_runtime`, `codex_approval_friction` | `trace-to-skill config-audit ~/.codex --format json` |
 | Bundled plugin cache and marketplace drift | Computer Use unavailable, Browser/Chrome plugin unavailable, generated runtime marketplace omits bundled plugins, missing `.mcp.json` or `plugin.json`, helper app not installed, `CODEX_HOME` points at another runtime | `codex_plugin_runtime`, `codex_mcp_runtime` | `trace-to-skill plugin-audit ~/.codex --app /Applications/Codex.app --format json` |
@@ -80,7 +80,7 @@ npx trace-to-skill lsp-audit . --format json
 - Include connector/plugin name and id, installed plugin root, exact Codex Apps tool name, 401/reauth text, `link_*` id before and after reconnect/cache regeneration, `isAccessible` state, redacted `codex_apps_tools`/`codex_app_directory` metadata, ChatGPT app page state, and external MCP workaround result for connector auth-cache regressions.
 - Include effective `CODEX_HOME`, config files considered, redacted MCP sections, trust/profile/default-permissions state, `codex mcp list/get`, CLI-versus-Desktop/VS Code comparison, loaded config path/log lines, WSL/remote/SSH state, and restart/reload/new-conversation results for MCP discovery mismatches.
 - Include terminal emulator/version, shell, WSL/SSH/tmux/Zellij state, streaming state, exact scroll action, viewport snap behavior, first missing or duplicated line id, raw log/transcript proof, terminal capture, numbered-line harness/control output, terminal dimensions/scrollback settings, and `/resume` or transcript recovery behavior for terminal-output integrity reports.
-- Include root thread id, subagent ids/nicknames/roles, spawn/close/list commands, `close_agent` results, `list_agents` or `/agents` output, `thread_spawn_edges` status counts, `agents.max_threads` or registry quota evidence, recent-list/sidebar behavior, child-thread archive/top-level status, last-progress or halt reason, MCP server state for subagents, compaction/resume timing, redacted UI evidence, restart/reload behavior, and whether stale agents are UI-only or still block spawns for subagent-lifecycle reports.
+- Include root thread id, subagent ids/nicknames/roles, spawn/close/list commands, `close_agent` results, `list_agents` or `/agents` output, `thread_spawn_edges` status counts, `agents.max_threads` or registry quota evidence, recent-list/sidebar behavior, child-thread archive/top-level status, last-progress or halt reason, MCP server state for subagents, compaction/resume timing, redacted UI evidence, restart/reload behavior, and whether stale agents are UI-only or still block spawns for subagent-lifecycle reports. Attach `session-audit` when local rollout JSONL can summarize those signals without posting transcripts.
 - Include selected approval scope, displayed vs executed command, MCP server/tool names, visible args, repeated prompt count, and config snippets for approval-friction reports.
 - Include `config-audit` output for Preferences/config, Speed/Fast persistence, sandbox, model-pin, MCP approval, and plugin-cache reports.
 - Include `plugin-audit` output, plugin name/version, cache path, helper path, manifest path, runtime marketplace, app-bundle marketplace, native pipe env vars, settings/plugin-list errors, and restart behavior for plugin runtime failures.

package/docs/DISCOVERY.md

@@ -29,7 +29,7 @@ This page is written for maintainers, search engines, package indexes, and AI re
 - Codex MCP tools are visible in `tools/list` but fail at runtime because approval is cancelled, elicitation is unsupported in exec mode, namespace or `serverName` metadata is dropped, routed names become `unsupported call`, or stdio transport closes.
 - Codex MCP servers work in CLI or one config scope but are absent in VS Code, Desktop, WSL, remote, project-local, or older-conversation sessions because the effective config path, `CODEX_HOME`, trust/profile state, or tool exposure differs.
 - Codex terminal output or scrollback becomes unreliable because streamed lines disappear, get overwritten, truncate, duplicate, misalign, snap to the bottom, or only survive in logs/transcripts.
-- Codex subagents become hard to trust because completed or closed agents remain visible, stale spawn edges stay open, child threads crowd the recent list, spawn quota is exhausted, or compaction loses prior subagent IDs.
+- Codex subagents become hard to trust because completed or closed agents remain visible, stale spawn edges stay open, child threads crowd the recent list, spawn quota is exhausted, or compaction loses prior subagent IDs; `session-audit` can summarize local subagent lifecycle signal counts without exposing transcripts.
 - Codex approval flow repeatedly prompts after `Approve for this session`, forgets a safe approval scope, or forces large trusted MCP servers into noisy per-tool approval configs.
 - Codex config drift makes Preferences unable to save, keeps legacy `profile` / `[profiles.*]` config after migration, pins an unavailable model, resets Speed/Fast to Standard despite persisted `service_tier`, points `default_permissions` at a missing profile, enables Windows elevated sandbox mode, or references plugin cache entries that are missing on disk.
 - Codex Desktop file tree, folder icon, floating file panel, or built-in file preview disappears, goes stale, or cannot be revealed by `View > Toggle File Tree`.
@@ -143,7 +143,7 @@ npx trace-to-skill suggest ./runs --target agents-md
 
 ## Related Keywords
 
-Codex, OpenAI Codex, Codex issue report, OpenAI triage, Codex LSP, Codex language server, lsp-audit, language-server readiness, typescript-language-server, pyright-langserver, gopls, rust-analyzer, sourcekit-lsp, clangd, Codex diagnostics bundle, privacy-preserving support bundle, workspace checkpoint, pre-agent checkpoint, Codex undo, Codex rewind, untracked file restore, sensitive path audit, sensitive-audit, agentignore, .agentignore, agentignore generator, codexignore, .codexignore, codexignore generator, aiexclude, .aiexclude, .gitignore candidates, exclude sensitive files, Codex plugin audit, Computer Use unavailable, Codex Browser plugin unavailable, bundled marketplace mismatch, generated runtime marketplace, plugin manifest missing, CODEX_HOME mismatch, Codex CLI, Codex sandbox, Windows sandbox, Codex config audit, Codex config.toml, Codex global state, .codex-global-state.json, Codex Speed reset, Codex Fast resets to Standard, service_tier fast, default-service-tier priority, has-user-changed-service-tier, Codex Preferences unable to save, configVersionConflict, default_permissions missing profile, Codex Windows helper path, Codex WindowsApps, Codex rg Access Denied, Codex ripgrep, CodexSandboxUsers, LocalCache Local OpenAI Codex bin, node_repl spawn setup refresh, Codex approval friction, Approve for this session, Allow for this session, approval_policy never, MCP approval prompts, default_tools_approval_mode, Playwright MCP approvals, Chrome DevTools MCP approvals, Codex auth, token_exchange_failed, Codex connectivity, stream disconnected, Codex connector auth cache, Codex Apps stale link, codex_apps_tools, codex_app_directory, Reauthentication required, refresh token revoked, isAccessible false, link_ connector, Codex deeplink, Codex OAuth callback, codex://oauth_callback, Unable to find Electron app, Error launching app, type=click&tag, AppUserModelID, DelegateExecute, codex app path, Codex remote compact, responses/compact, /compact timeout, tcp_user_timeout, stream_idle_timeout_ms, Codex remote control, Codex mobile, Waiting for desktop, Directory Unavailable, stale listener, Codex terminal output, Codex scrollback, Codex terminal history, terminal output integrity, missing_count, missing_examples, tmux_scrollback_repro.sh, line_truncation_repro.md, Windows Terminal scrollback, transcript mode, Codex subagent lifecycle, stale subagents, close_agent, thread_spawn_edges, agent thread limit reached, agents.max_threads, list_agents, /agents, subagent child threads, fork_context, unbiased review, subagent recent conversations, Codex MCP runtime, MCP unsupported call, mcp__node_repl__js, MCP namespace serverName, MCP Transport closed, StdioServerTransport, Codex plugin runtime, Computer Use native pipe path unavailable, SKY_CUA_NATIVE_PIPE_DIRECTORY, Plugin loading failed, plugin/list unknown variant vertical, Codex Browser plugin, Codex Computer Use, Codex Chrome plugin, stale plugin cache, codex plugin add, Codex file tree, Toggle File Tree, missing folder icon, floating file panel stale, file preview fails, workspace navigation, Codex project history disappeared, Codex project threads hidden, Codex session index repair, unindexed rollout thread, codex resume thread id, Codex latest-turn drift, Codex replies to earlier messages, stale prompt response, ignoring latest message, previous prompt, auto compaction forgets edits, raw tool payload leak, write_stdin session_id, Codex latency regression, GPT-5.5 Fast slow, Codex too slow, thinking stalls, Codex thinking hang, Codex stuck thinking, Codex Working stuck, no streamed follow-up, first response_item delayed, responses_http time.idle, model_client.stream_responses_api, turn/start, task_started, Codex Copy as Markdown missing, Codex Pasted text.txt, Codex long pasted prompt attachment, Codex clipboard export, Codex paste as text, Codex generated attachment preview edit, Codex goal ignores attachment, pasted-text-attachments.json, fileAttachments promptRaw composer.getText, pre-first-token latency, search/read latency, runtime scheduling latency, Codex resume, Codex session audit, Codex history audit, Codex history map, Codex session index, session_index.jsonl, Codex session state, rollout JSONL, logs_2.sqlite, codex-tui.log, sandbox.log, thread_goals, state_5.sqlite, goals_1.sqlite, archived chats, Codex token burn, Codex usage evidence, Codex rate-limit evidence, Codex usage drain, Codex usage reset, Codex weekly reset drift, reset_at changed, deterministic reset, rate limit reset, write_stdin polling, cached input tokens, compaction tax, background process polling, Codex process audit, PowerShell polling, powershell.exe Get-CimInstance Win32_Process, Win32_PerfFormattedData_PerfProc_Process, chat_processes.json stale entries, Codex resource leak, Codex performance, high CPU, high GPU, shell-snapshot, Code Helper Renderer, Codex tool-call integrity, apply_patch, apply_patch Add File overwrite, patch guard, guard-patch, Add File symlink, tool_call_id, failed revert changes, patch safety, Codex quota, usage limit, rate limits, sensitive files, Codex privacy, .env, private keys, credential files, AGENTS.md, SKILL.md, Claude Code, Cursor, Copilot coding agent, Gemini CLI, MCP, Model Context Protocol, prompt injection, agent evals, AI code review, open-source maintainers, trace redaction, SARIF, GitHub Actions.
+Codex, OpenAI Codex, Codex issue report, OpenAI triage, Codex LSP, Codex language server, lsp-audit, language-server readiness, typescript-language-server, pyright-langserver, gopls, rust-analyzer, sourcekit-lsp, clangd, Codex diagnostics bundle, privacy-preserving support bundle, workspace checkpoint, pre-agent checkpoint, Codex undo, Codex rewind, untracked file restore, sensitive path audit, sensitive-audit, agentignore, .agentignore, agentignore generator, codexignore, .codexignore, codexignore generator, aiexclude, .aiexclude, .gitignore candidates, exclude sensitive files, Codex plugin audit, Computer Use unavailable, Codex Browser plugin unavailable, bundled marketplace mismatch, generated runtime marketplace, plugin manifest missing, CODEX_HOME mismatch, Codex CLI, Codex sandbox, Windows sandbox, Codex config audit, Codex config.toml, Codex global state, .codex-global-state.json, Codex Speed reset, Codex Fast resets to Standard, service_tier fast, default-service-tier priority, has-user-changed-service-tier, Codex Preferences unable to save, configVersionConflict, default_permissions missing profile, Codex Windows helper path, Codex WindowsApps, Codex rg Access Denied, Codex ripgrep, CodexSandboxUsers, LocalCache Local OpenAI Codex bin, node_repl spawn setup refresh, Codex approval friction, Approve for this session, Allow for this session, approval_policy never, MCP approval prompts, default_tools_approval_mode, Playwright MCP approvals, Chrome DevTools MCP approvals, Codex auth, token_exchange_failed, Codex connectivity, stream disconnected, Codex connector auth cache, Codex Apps stale link, codex_apps_tools, codex_app_directory, Reauthentication required, refresh token revoked, isAccessible false, link_ connector, Codex deeplink, Codex OAuth callback, codex://oauth_callback, Unable to find Electron app, Error launching app, type=click&tag, AppUserModelID, DelegateExecute, codex app path, Codex remote compact, responses/compact, /compact timeout, tcp_user_timeout, stream_idle_timeout_ms, Codex remote control, Codex mobile, Waiting for desktop, Directory Unavailable, stale listener, Codex terminal output, Codex scrollback, Codex terminal history, terminal output integrity, missing_count, missing_examples, tmux_scrollback_repro.sh, line_truncation_repro.md, Windows Terminal scrollback, transcript mode, Codex subagent lifecycle, Codex subagent audit, stale subagents, close_agent, wait_agent, spawn_agent, thread_spawn_edges, agent thread limit reached, agents.max_threads, list_agents, /agents, subagent child threads, fork_context, unbiased review, subagent recent conversations, Codex MCP runtime, MCP unsupported call, mcp__node_repl__js, MCP namespace serverName, MCP Transport closed, StdioServerTransport, Codex plugin runtime, Computer Use native pipe path unavailable, SKY_CUA_NATIVE_PIPE_DIRECTORY, Plugin loading failed, plugin/list unknown variant vertical, Codex Browser plugin, Codex Computer Use, Codex Chrome plugin, stale plugin cache, codex plugin add, Codex file tree, Toggle File Tree, missing folder icon, floating file panel stale, file preview fails, workspace navigation, Codex project history disappeared, Codex project threads hidden, Codex session index repair, unindexed rollout thread, codex resume thread id, Codex latest-turn drift, Codex replies to earlier messages, stale prompt response, ignoring latest message, previous prompt, auto compaction forgets edits, raw tool payload leak, write_stdin session_id, Codex latency regression, GPT-5.5 Fast slow, Codex too slow, thinking stalls, Codex thinking hang, Codex stuck thinking, Codex Working stuck, no streamed follow-up, first response_item delayed, responses_http time.idle, model_client.stream_responses_api, turn/start, task_started, Codex Copy as Markdown missing, Codex Pasted text.txt, Codex long pasted prompt attachment, Codex clipboard export, Codex paste as text, Codex generated attachment preview edit, Codex goal ignores attachment, pasted-text-attachments.json, fileAttachments promptRaw composer.getText, pre-first-token latency, search/read latency, runtime scheduling latency, Codex resume, Codex session audit, Codex history audit, Codex history map, Codex session index, session_index.jsonl, Codex session state, rollout JSONL, logs_2.sqlite, codex-tui.log, sandbox.log, thread_goals, state_5.sqlite, goals_1.sqlite, archived chats, Codex token burn, Codex usage evidence, Codex rate-limit evidence, Codex usage drain, Codex usage reset, Codex weekly reset drift, reset_at changed, deterministic reset, rate limit reset, write_stdin polling, cached input tokens, compaction tax, background process polling, Codex process audit, PowerShell polling, powershell.exe Get-CimInstance Win32_Process, Win32_PerfFormattedData_PerfProc_Process, chat_processes.json stale entries, Codex resource leak, Codex performance, high CPU, high GPU, shell-snapshot, Code Helper Renderer, Codex tool-call integrity, apply_patch, apply_patch Add File overwrite, patch guard, guard-patch, Add File symlink, tool_call_id, failed revert changes, patch safety, Codex quota, usage limit, rate limits, sensitive files, Codex privacy, .env, private keys, credential files, AGENTS.md, SKILL.md, Claude Code, Cursor, Copilot coding agent, Gemini CLI, MCP, Model Context Protocol, prompt injection, agent evals, AI code review, open-source maintainers, trace redaction, SARIF, GitHub Actions.
 
 ## Non-Goals
 

package/docs/OPENAI_OSS_BRIEF.md

@@ -3,7 +3,7 @@
 | Field | Value |
 | --- | --- |
 | Repository | https://github.com/grnbtqdbyx-create/trace-to-skill |
-| Package | trace-to-skill@0.1.77 |
+| Package | trace-to-skill@0.1.78 |
 | License | Apache-2.0 |
 | Codex readiness | ready (100/100) |
 | Benchmark | pass, 33 cases |
@@ -27,7 +27,7 @@ API credits would power optional maintainer workflows on top of the local determ
 ## Evidence
 
 - Public repository: https://github.com/grnbtqdbyx-create/trace-to-skill
-- One-command package: npx trace-to-skill@0.1.77
+- One-command package: npx trace-to-skill@0.1.78
 - Open-source license: Apache-2.0
 - Codex readiness doctor: ready, 100/100, 0 failed checks.
 - Public fixture benchmark: pass, 33 cases.

package/docs/USE_CASES.md

@@ -54,7 +54,7 @@ What it proves:
 Recommended CI surface:
 
 ```yaml
-- uses: grnbtqdbyx-create/trace-to-skill@v0.1.77
+- uses: grnbtqdbyx-create/trace-to-skill@v0.1.78
   with:
     mode: all
     doctor-threshold: "85"
@@ -234,7 +234,7 @@ npx trace-to-skill diagnostics-bundle ~/.codex --output codex-diagnostics
 
 This catches signals such as `codex resume` picker hangs, `codex resume <id>` working while the picker freezes, project pages/search/sidebar hiding threads that still exist on disk, transcript-like `session_index.jsonl` titles that can poison sidebar/search caches, large `rollout-*.jsonl` histories, high JSONL line and `response_item` / `event_msg` / `function_call` counts, large `input_image` payloads, slow `thread/resume` and `thread/goal/get` timings, `Could not load archived chats`, resume compression dropping the last 3-5 turns, `state_5.sqlite` / `goals_1.sqlite` migration mismatches, `no such table: thread_goals`, stale `projectless-thread-ids`, and `thread-workspace-root-hints` reverting after restart.
 
-`session-audit` is local and read-only: it reports rollout JSONL size, line count, largest line size, parse errors, session index line count, title byte/signal counts, state-file presence, recoverable thread ids, `codex resume <id>` commands, and common session signals so users can attach a privacy-preserving summary to OpenAI/Codex issues instead of posting transcripts. Full workspace paths are not printed in the thread table; related projects are grouped by basename plus a short path hash.
+`session-audit` is local and read-only: it reports rollout JSONL size, line count, largest line size, parse errors, session index line count, title byte/signal counts, subagent lifecycle signal counts, state-file presence, recoverable thread ids, `codex resume <id>` commands, and common session signals so users can attach a privacy-preserving summary to OpenAI/Codex issues instead of posting transcripts. Full workspace paths are not printed in the thread table; related projects are grouped by basename plus a short path hash.
 
 For mixed resume, crash, config, plugin, or history issues, `diagnostics-bundle` writes the session, config, and plugin reports together with a checklist of files not to attach publicly.
 

package/llms.txt

@@ -25,7 +25,7 @@ Runtime: Node.js 20+
 - Codex MCP runtime failures such as cancelled non-interactive approvals, `request_user_input is not supported in exec mode`, dropped namespace or `serverName` metadata, `unsupported call: mcp__...__...`, and closed `StdioServerTransport` sessions
 - Codex MCP discovery and config-scope mismatches where CLI `/mcp` works but VS Code, Desktop, WSL, project `.codex/config.toml`, `CODEX_HOME`, or an older conversation exposes no `mcp__*` tools
 - Codex terminal output and scrollback integrity failures where streamed lines disappear, get overwritten, truncate, duplicate, misalign, snap to the bottom, or only survive in raw logs/transcripts
-- Codex subagent lifecycle failures where completed or closed agents remain visible, `thread_spawn_edges` drift, child threads crowd the recent list, `agent thread limit reached` blocks spawns, or compaction loses prior subagent IDs
+- Codex subagent lifecycle failures where completed or closed agents remain visible, `thread_spawn_edges` drift, child threads crowd the recent list, `agent thread limit reached` blocks spawns, or compaction loses prior subagent IDs; `session-audit` can summarize local subagent signal counts without exposing transcripts
 - Codex resume and session-state failures such as frozen resume pickers, large rollout JSONL histories, short `session_index.jsonl`, transcript-like sidebar title chunks, sluggish Desktop thread rendering, dropped recent context after resume, archived chat loading failures, and `state_5.sqlite` / `goals_1.sqlite` migration drift
 - Codex file tree and workspace navigation UI failures such as `View > Toggle File Tree` doing nothing, missing folder icons, stale floating file panels, and built-in preview failures
 - Codex Thinking or Working hangs after accepted turns, successful local tools, or open Responses streams with no streamed assistant follow-up
@@ -109,7 +109,7 @@ npx trace-to-skill init --comment --sarif
 ## GitHub Action
 
 ```yaml
-- uses: grnbtqdbyx-create/trace-to-skill@v0.1.77
+- uses: grnbtqdbyx-create/trace-to-skill@v0.1.78
   with:
     mode: all
     doctor-threshold: "85"

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "trace-to-skill",
-  "version": "0.1.77",
+  "version": "0.1.78",
   "description": "Turn failed AI coding-agent runs into reusable AGENTS.md rules, SKILL.md files, and eval evidence.",
   "type": "module",
   "main": "dist/src/index.js",
@@ -112,6 +112,8 @@
     "codex-subagent",
     "codex-subagents",
     "subagent-lifecycle",
+    "codex-subagent-audit",
+    "subagent-audit",
     "codex-mcp",
     "codex-mcp-discovery",
     "mcp-config",

package/schemas/session-audit-result.schema.json

@@ -4,7 +4,7 @@
   "title": "trace-to-skill Codex session audit result",
   "type": "object",
   "additionalProperties": false,
-  "required": ["generatedAt", "root", "status", "thresholds", "summary", "files", "threads", "stateFiles", "findings"],
+  "required": ["generatedAt", "root", "status", "thresholds", "summary", "files", "threads", "subagentSignals", "stateFiles", "findings"],
   "properties": {
     "generatedAt": {
       "type": "string",
@@ -35,6 +35,12 @@
         "$ref": "#/$defs/thread"
       }
     },
+    "subagentSignals": {
+      "type": "array",
+      "items": {
+        "$ref": "#/$defs/subagentSignal"
+      }
+    },
     "stateFiles": {
       "type": "array",
       "items": {
@@ -67,7 +73,7 @@
     "summary": {
       "type": "object",
       "additionalProperties": false,
-      "required": ["jsonlFiles", "totalBytes", "largeFiles", "hugeLineFiles", "parseErrorFiles", "rolloutThreads", "indexedThreads", "unindexedRolloutThreads", "bloatedIndexTitles", "projectRoots"],
+      "required": ["jsonlFiles", "totalBytes", "largeFiles", "hugeLineFiles", "parseErrorFiles", "rolloutThreads", "indexedThreads", "unindexedRolloutThreads", "bloatedIndexTitles", "subagentSignalFiles", "subagentSignals", "projectRoots"],
       "properties": {
         "jsonlFiles": {
           "type": "integer",
@@ -113,6 +119,14 @@
           "type": "integer",
           "minimum": 0
         },
+        "subagentSignalFiles": {
+          "type": "integer",
+          "minimum": 0
+        },
+        "subagentSignals": {
+          "type": "integer",
+          "minimum": 0
+        },
         "projectRoots": {
           "type": "integer",
           "minimum": 0
@@ -243,6 +257,38 @@
         }
       }
     },
+    "subagentSignal": {
+      "type": "object",
+      "additionalProperties": false,
+      "required": ["path", "kind", "count", "note"],
+      "properties": {
+        "path": {
+          "type": "string"
+        },
+        "kind": {
+          "type": "string",
+          "enum": [
+            "spawn_agent",
+            "wait_agent",
+            "close_agent",
+            "thread_spawn_edges",
+            "agent_thread_limit",
+            "stale_subagent_ui",
+            "child_recent_thread",
+            "compaction_lost_subagents",
+            "no_agents_completed",
+            "subagent_notification"
+          ]
+        },
+        "count": {
+          "type": "integer",
+          "minimum": 1
+        },
+        "note": {
+          "type": "string"
+        }
+      }
+    },
     "stateFile": {
       "type": "object",
       "additionalProperties": false,
@@ -271,7 +317,7 @@
         },
         "kind": {
           "type": "string",
-          "enum": ["large_rollout", "huge_jsonl_line", "json_parse_error", "short_session_index", "unindexed_rollout_thread", "bloated_index_title", "state_file_present"]
+          "enum": ["large_rollout", "huge_jsonl_line", "json_parse_error", "short_session_index", "unindexed_rollout_thread", "bloated_index_title", "subagent_lifecycle_signal", "state_file_present"]
         },
         "path": {
           "type": "string"