trace-to-skill 0.1.26

package/dist/src/cli.js.map

@@ -0,0 +1 @@
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package/dist/src/doctor.d.ts

@@ -0,0 +1,18 @@
+import type { Finding } from "./types.js";
+export type DoctorStatus = "pass" | "warn" | "fail";
+export interface DoctorCheck {
+    id: string;
+    status: DoctorStatus;
+    title: string;
+    detail: string;
+    recommendation?: string;
+}
+export interface DoctorResult {
+    generatedAt: string;
+    root: string;
+    score: number;
+    summary: string;
+    checks: DoctorCheck[];
+    findings: Finding[];
+}
+export declare function doctorRepo(target?: string): Promise<DoctorResult>;

package/dist/src/doctor.js

@@ -0,0 +1,300 @@
+import { promises as fs } from "node:fs";
+import path from "node:path";
+import { collectFindings } from "./rules.js";
+const SKIP_DIRS = new Set([".git", "node_modules", "dist", "coverage", ".next", "build"]);
+const INSTRUCTION_FILES = [
+    "AGENTS.md",
+    "CLAUDE.md",
+    "GEMINI.md",
+    ".github/copilot-instructions.md"
+];
+export async function doctorRepo(target = process.cwd()) {
+    const root = path.resolve(target);
+    const stats = await fs.stat(root);
+    if (!stats.isDirectory()) {
+        throw new Error("doctor requires a repository directory");
+    }
+    const files = await listFiles(root);
+    const fileSet = new Set(files);
+    const checks = await buildChecks(root, files, fileSet);
+    const findings = await collectRepoFindings(root, files);
+    const score = calculateDoctorScore(checks, findings);
+    return {
+        generatedAt: new Date().toISOString(),
+        root,
+        score,
+        summary: summarizeDoctor(score, checks, findings),
+        checks,
+        findings
+    };
+}
+async function buildChecks(root, files, fileSet) {
+    const checks = [];
+    const instructionFiles = files.filter((file) => isInstructionFile(file));
+    checks.push(checkInstructions(instructionFiles));
+    checks.push(checkCi(files));
+    checks.push(await checkValidation(root, fileSet));
+    checks.push(await checkLicense(root, fileSet));
+    checks.push(checkOssHealth(fileSet));
+    checks.push(checkDistribution(fileSet));
+    checks.push(checkTraceLoop(fileSet));
+    return checks;
+}
+function checkInstructions(instructionFiles) {
+    if (instructionFiles.includes("AGENTS.md")) {
+        return {
+            id: "agent-instructions",
+            status: "pass",
+            title: "Codex instructions found",
+            detail: "AGENTS.md is present, so Codex and other agents have a repository-level source of truth."
+        };
+    }
+    if (instructionFiles.length > 0) {
+        return {
+            id: "agent-instructions",
+            status: "warn",
+            title: "Agent instructions are tool-specific",
+            detail: `Found ${instructionFiles.join(", ")} but no AGENTS.md.`,
+            recommendation: "Add AGENTS.md as the shared maintainer-controlled instruction file, and have tool-specific files reference it."
+        };
+    }
+    return {
+        id: "agent-instructions",
+        status: "fail",
+        title: "No agent instruction file found",
+        detail: "The repository has no AGENTS.md, CLAUDE.md, GEMINI.md, Cursor rules, or Copilot instruction file.",
+        recommendation: "Add AGENTS.md with validation, scope, safety, and completion-evidence rules before handing work to coding agents."
+    };
+}
+function checkCi(files) {
+    const workflows = files.filter((file) => /^\.github\/workflows\/.+\.ya?ml$/i.test(file));
+    if (workflows.length > 0) {
+        return {
+            id: "ci",
+            status: "pass",
+            title: "GitHub Actions workflow found",
+            detail: `Found ${workflows.length} workflow file(s).`
+        };
+    }
+    return {
+        id: "ci",
+        status: "fail",
+        title: "No GitHub Actions workflow found",
+        detail: "Codex-generated changes need a CI signal that maintainers and contributors can see.",
+        recommendation: "Add at least one GitHub Actions workflow for tests, typecheck, lint, or agent-learning evaluation."
+    };
+}
+async function checkValidation(root, fileSet) {
+    const packageJson = await readJsonObject(path.join(root, "package.json"));
+    const scripts = asObject(packageJson?.scripts);
+    const validationScripts = scripts
+        ? Object.keys(scripts).filter((name) => /^(test|check|build|lint|typecheck|ci)$/i.test(name))
+        : [];
+    if (validationScripts.length > 0) {
+        return {
+            id: "validation",
+            status: "pass",
+            title: "Validation scripts found",
+            detail: `package.json exposes ${validationScripts.map((name) => `"${name}"`).join(", ")}.`
+        };
+    }
+    const knownManifests = ["Cargo.toml", "go.mod", "pyproject.toml", "pom.xml", "build.gradle", "Package.swift"];
+    if (knownManifests.some((file) => fileSet.has(file))) {
+        return {
+            id: "validation",
+            status: "warn",
+            title: "Project manifest found without obvious validation script",
+            detail: "A language manifest exists, but doctor could not find a standard validation entrypoint.",
+            recommendation: "Document the canonical test/build/lint command in AGENTS.md and CI."
+        };
+    }
+    return {
+        id: "validation",
+        status: "warn",
+        title: "No validation command detected",
+        detail: "Doctor could not find a package.json validation script or common language manifest.",
+        recommendation: "Add a repeatable validation command so Codex can prove changes before completion."
+    };
+}
+async function checkLicense(root, fileSet) {
+    const licenseFile = filesFirst(fileSet, ["LICENSE", "LICENSE.md", "COPYING"]);
+    if (!licenseFile) {
+        return {
+            id: "license",
+            status: "fail",
+            title: "No license file found",
+            detail: "Open-source users and program reviewers need clear reuse terms.",
+            recommendation: "Add a standard OSI-approved license such as Apache-2.0 or MIT."
+        };
+    }
+    const content = await fs.readFile(path.join(root, licenseFile), "utf8");
+    const normalized = content.toLowerCase();
+    const license = normalized.includes("apache license") ? "Apache-2.0" :
+        normalized.includes("mit license") ? "MIT" :
+            normalized.includes("bsd") ? "BSD-style" :
+                "custom or unrecognized";
+    return {
+        id: "license",
+        status: license === "custom or unrecognized" ? "warn" : "pass",
+        title: "License file found",
+        detail: `${licenseFile} appears to be ${license}.`,
+        recommendation: license === "custom or unrecognized" ? "Prefer a standard OSI-approved license to reduce adoption friction." : undefined
+    };
+}
+function checkOssHealth(fileSet) {
+    const present = ["README.md", "CONTRIBUTING.md", "SECURITY.md", "CODE_OF_CONDUCT.md"].filter((file) => fileSet.has(file));
+    if (present.length >= 3 && present.includes("README.md")) {
+        return {
+            id: "oss-health",
+            status: "pass",
+            title: "Open-source maintenance files found",
+            detail: `Found ${present.join(", ")}.`
+        };
+    }
+    return {
+        id: "oss-health",
+        status: "warn",
+        title: "Open-source maintenance metadata is thin",
+        detail: `Found ${present.join(", ") || "none of README.md, CONTRIBUTING.md, SECURITY.md, CODE_OF_CONDUCT.md"}.`,
+        recommendation: "Add README, contribution, security, and conduct docs so contributors and agent-generated PRs have a clear path."
+    };
+}
+function checkDistribution(fileSet) {
+    const channels = [
+        fileSet.has("package.json") ? "npm package" : undefined,
+        fileSet.has("action.yml") || fileSet.has("action.yaml") ? "GitHub Action" : undefined,
+        fileSet.has("Dockerfile") ? "Docker image" : undefined
+    ].filter((item) => Boolean(item));
+    if (channels.length > 0) {
+        return {
+            id: "distribution",
+            status: "pass",
+            title: "Distribution surface found",
+            detail: `Detected ${channels.join(", ")}.`
+        };
+    }
+    return {
+        id: "distribution",
+        status: "warn",
+        title: "No obvious installation surface found",
+        detail: "Users are more likely to try and star a project when installation is one command.",
+        recommendation: "Provide an npm package, GitHub Action, Docker image, or binary release."
+    };
+}
+function checkTraceLoop(fileSet) {
+    const hasRuns = fileSet.has("runs/README.md") || fileSet.has("runs/.gitkeep");
+    const hasTraceToSkillWorkflow = Array.from(fileSet).some((file) => /^\.github\/workflows\/.+\.ya?ml$/i.test(file));
+    if (hasRuns && hasTraceToSkillWorkflow) {
+        return {
+            id: "agent-learning-loop",
+            status: "pass",
+            title: "Agent learning loop scaffold found",
+            detail: "A runs directory and GitHub workflow are present."
+        };
+    }
+    return {
+        id: "agent-learning-loop",
+        status: "warn",
+        title: "Agent learning loop is not scaffolded",
+        detail: "Doctor did not find both a runs directory scaffold and GitHub workflow.",
+        recommendation: "Run trace-to-skill init --comment --sarif to collect traces, report findings, and gate repeated failures."
+    };
+}
+async function collectRepoFindings(root, files) {
+    const candidates = files.filter((file) => !isEvidenceArchive(file) && (isInstructionFile(file) || isMcpConfigCandidate(file)));
+    if (candidates.length === 0) {
+        return [];
+    }
+    const inputs = [];
+    for (const file of candidates.slice(0, 40)) {
+        const fullPath = path.join(root, file);
+        const content = await fs.readFile(fullPath, "utf8");
+        inputs.push({ path: file, content });
+    }
+    return collectFindings(inputs).filter((finding) => finding.kind === "ignored_instruction" ||
+        finding.kind === "mcp_risk" ||
+        finding.kind === "secret_exposure" ||
+        finding.kind === "hidden_unicode");
+}
+async function listFiles(root) {
+    const files = [];
+    async function visit(dir) {
+        const entries = await fs.readdir(dir, { withFileTypes: true });
+        for (const entry of entries) {
+            const fullPath = path.join(dir, entry.name);
+            const relative = path.relative(root, fullPath).split(path.sep).join("/");
+            if (entry.isDirectory()) {
+                if (!SKIP_DIRS.has(entry.name)) {
+                    await visit(fullPath);
+                }
+                continue;
+            }
+            if (entry.isFile()) {
+                files.push(relative);
+            }
+        }
+    }
+    await visit(root);
+    return files.sort((a, b) => a.localeCompare(b));
+}
+function calculateDoctorScore(checks, findings) {
+    const checkPenalty = checks.reduce((total, check) => {
+        if (check.status === "fail") {
+            return total + 15;
+        }
+        if (check.status === "warn") {
+            return total + 7;
+        }
+        return total;
+    }, 0);
+    const findingPenalty = findings.reduce((total, finding) => {
+        const value = {
+            low: 2,
+            medium: 5,
+            high: 10,
+            critical: 20
+        }[finding.severity];
+        return total + value;
+    }, 0);
+    return Math.max(0, Math.min(100, 100 - checkPenalty - findingPenalty));
+}
+function summarizeDoctor(score, checks, findings) {
+    if (checks.some((check) => check.status === "fail") || findings.some((finding) => finding.severity === "critical")) {
+        return "Repository is not ready for broad Codex automation. Fix failed checks and critical findings first.";
+    }
+    if (score >= 85) {
+        return "Repository is Codex-ready, with clear maintainer controls and validation evidence.";
+    }
+    if (score >= 70) {
+        return "Repository is close to Codex-ready, but a few maintainer controls should be tightened.";
+    }
+    return "Repository needs clearer agent instructions, validation, or OSS maintenance metadata before broad automation.";
+}
+function isInstructionFile(file) {
+    return INSTRUCTION_FILES.includes(file) ||
+        /(^|\/)(AGENTS|CLAUDE|GEMINI|COPILOT|copilot-instructions)\.md$/i.test(file) ||
+        /^\.cursor\/rules\/.+/i.test(file);
+}
+function isMcpConfigCandidate(file) {
+    return /(^|\/)(mcp|\.mcp|mcp-config|model-context)\.(json|jsonc)$/i.test(file) ||
+        /(^|\/)\.cursor\/mcp\.json$/i.test(file);
+}
+function isEvidenceArchive(file) {
+    return /^(fixtures|examples|runs)\//i.test(file);
+}
+function filesFirst(fileSet, names) {
+    return names.find((name) => fileSet.has(name));
+}
+async function readJsonObject(filePath) {
+    try {
+        const raw = await fs.readFile(filePath, "utf8");
+        return asObject(JSON.parse(raw));
+    }
+    catch {
+        return undefined;
+    }
+}
+function asObject(value) {
+    return value && typeof value === "object" && !Array.isArray(value) ? value : undefined;
+}
+//# sourceMappingURL=doctor.js.map

package/dist/src/doctor.js.map

@@ -0,0 +1 @@
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package/dist/src/eval.d.ts

@@ -0,0 +1,19 @@
+import type { AnalysisResult } from "./types.js";
+export interface EvalResult {
+    passed: boolean;
+    score: number;
+    threshold: number;
+    criticalFindings: number;
+    message: string;
+}
+export interface ComparisonResult {
+    decision: "keep" | "revise" | "reject";
+    beforeScore: number;
+    afterScore: number;
+    delta: number;
+    beforeCriticalFindings: number;
+    afterCriticalFindings: number;
+    message: string;
+}
+export declare function evaluate(result: AnalysisResult, threshold?: number): EvalResult;
+export declare function compareAnalyses(before: AnalysisResult, after: AnalysisResult): ComparisonResult;

package/dist/src/eval.js

@@ -0,0 +1,48 @@
+export function evaluate(result, threshold = 75) {
+    const criticalFindings = result.findings.filter((finding) => finding.severity === "critical").length;
+    const passed = result.score >= threshold && criticalFindings === 0;
+    return {
+        passed,
+        score: result.score,
+        threshold,
+        criticalFindings,
+        message: passed
+            ? `Agent workflow passed with score ${result.score}/100.`
+            : `Agent workflow failed: score ${result.score}/100, critical findings ${criticalFindings}.`
+    };
+}
+export function compareAnalyses(before, after) {
+    const beforeCriticalFindings = countCritical(before);
+    const afterCriticalFindings = countCritical(after);
+    const delta = after.score - before.score;
+    const criticalDelta = afterCriticalFindings - beforeCriticalFindings;
+    const decision = decide(delta, criticalDelta, afterCriticalFindings);
+    return {
+        decision,
+        beforeScore: before.score,
+        afterScore: after.score,
+        delta,
+        beforeCriticalFindings,
+        afterCriticalFindings,
+        message: buildComparisonMessage(decision, delta, beforeCriticalFindings, afterCriticalFindings)
+    };
+}
+function decide(delta, criticalDelta, afterCriticalFindings) {
+    if (criticalDelta > 0 || delta < -5) {
+        return "reject";
+    }
+    if (delta >= 5 && afterCriticalFindings === 0) {
+        return "keep";
+    }
+    return "revise";
+}
+function countCritical(result) {
+    return result.findings.filter((finding) => finding.severity === "critical").length;
+}
+function buildComparisonMessage(decision, delta, beforeCriticalFindings, afterCriticalFindings) {
+    return `Decision: ${decision}. Score delta ${formatDelta(delta)}. Critical findings ${beforeCriticalFindings} -> ${afterCriticalFindings}.`;
+}
+function formatDelta(value) {
+    return value >= 0 ? `+${value}` : String(value);
+}
+//# sourceMappingURL=eval.js.map

package/dist/src/eval.js.map

@@ -0,0 +1 @@
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package/dist/src/github.d.ts

@@ -0,0 +1,11 @@
+interface GitHubCommentOptions {
+    token?: string;
+    repository?: string;
+    eventPath?: string;
+    body: string;
+    dryRun?: boolean;
+    marker?: string;
+    reportName?: string;
+}
+export declare function postPullRequestComment(options: GitHubCommentOptions): Promise<string>;
+export {};

package/dist/src/github.js

@@ -0,0 +1,66 @@
+import { readFile } from "node:fs/promises";
+const MARKER = "<!-- trace-to-skill-report -->";
+export async function postPullRequestComment(options) {
+    const token = options.token ?? process.env.GITHUB_TOKEN;
+    const repository = options.repository ?? process.env.GITHUB_REPOSITORY;
+    const eventPath = options.eventPath ?? process.env.GITHUB_EVENT_PATH;
+    const marker = options.marker ?? MARKER;
+    const reportName = options.reportName ?? "trace-to-skill report";
+    if (!repository) {
+        throw new Error("GITHUB_REPOSITORY is required for PR comments.");
+    }
+    const pullNumber = await resolvePullRequestNumber(eventPath);
+    if (!pullNumber) {
+        throw new Error("No pull_request number found in GITHUB_EVENT_PATH.");
+    }
+    if (options.dryRun) {
+        return `dry-run: would post ${reportName} to ${repository}#${pullNumber}`;
+    }
+    if (!token) {
+        throw new Error("GITHUB_TOKEN is required for PR comments.");
+    }
+    const commentsUrl = `https://api.github.com/repos/${repository}/issues/${pullNumber}/comments`;
+    const comments = (await githubRequest(commentsUrl, token));
+    const existing = comments.find((comment) => comment.user?.type === "Bot" && comment.body?.includes(marker));
+    if (existing) {
+        await githubRequest(`https://api.github.com/repos/${repository}/issues/comments/${existing.id}`, token, {
+            method: "PATCH",
+            body: JSON.stringify({ body: options.body })
+        });
+        return `updated ${reportName} comment on ${repository}#${pullNumber}`;
+    }
+    await githubRequest(commentsUrl, token, {
+        method: "POST",
+        body: JSON.stringify({ body: options.body })
+    });
+    return `posted ${reportName} comment on ${repository}#${pullNumber}`;
+}
+async function resolvePullRequestNumber(eventPath) {
+    if (!eventPath) {
+        return undefined;
+    }
+    const event = JSON.parse(await readFile(eventPath, "utf8"));
+    return event.pull_request?.number ?? event.number;
+}
+async function githubRequest(url, token, init = {}) {
+    const response = await fetch(url, {
+        ...init,
+        headers: {
+            Accept: "application/vnd.github+json",
+            Authorization: `Bearer ${token}`,
+            "Content-Type": "application/json",
+            "User-Agent": "trace-to-skill",
+            "X-GitHub-Api-Version": "2022-11-28",
+            ...init.headers
+        }
+    });
+    if (!response.ok) {
+        const text = await response.text();
+        throw new Error(`GitHub API ${response.status}: ${text.slice(0, 500)}`);
+    }
+    if (response.status === 204) {
+        return undefined;
+    }
+    return response.json();
+}
+//# sourceMappingURL=github.js.map

package/dist/src/github.js.map

@@ -0,0 +1 @@
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package/dist/src/githubContext.d.ts

@@ -0,0 +1,6 @@
+import type { AnalysisResult, TraceInput } from "./types.js";
+export interface GithubContextResult extends AnalysisResult {
+    eventPath: string;
+}
+export declare function analyzeGithubEventContext(eventPath: string): Promise<GithubContextResult>;
+export declare function extractGithubContextInputs(event: unknown): TraceInput[];

package/dist/src/githubContext.js

@@ -0,0 +1,60 @@
+import { readFile } from "node:fs/promises";
+import { analyzeInputs } from "./analyze.js";
+export async function analyzeGithubEventContext(eventPath) {
+    const raw = await readFile(eventPath, "utf8");
+    const parsed = JSON.parse(raw);
+    const inputs = extractGithubContextInputs(parsed);
+    const result = analyzeInputs(inputs);
+    return {
+        ...result,
+        eventPath
+    };
+}
+export function extractGithubContextInputs(event) {
+    const root = asObject(event);
+    if (!root) {
+        return [];
+    }
+    const inputs = [];
+    addObjectText(inputs, "github-event/action", root, ["action"]);
+    addObjectText(inputs, "github-event/pull_request", root.pull_request, ["title", "body"]);
+    addObjectText(inputs, "github-event/issue", root.issue, ["title", "body"]);
+    addObjectText(inputs, "github-event/comment", root.comment, ["body"]);
+    addObjectText(inputs, "github-event/discussion", root.discussion, ["title", "body"]);
+    addObjectText(inputs, "github-event/review", root.review, ["body"]);
+    addObjectText(inputs, "github-event/check_run", asObject(root.check_run)?.output, ["title", "summary", "text"]);
+    const commits = Array.isArray(root.commits) ? root.commits : [];
+    commits.slice(0, 20).forEach((commit, index) => {
+        addObjectText(inputs, `github-event/commit-${index + 1}`, commit, ["message"]);
+    });
+    return inputs.length > 0 ? inputs : [{
+            path: "github-event/empty",
+            content: "No supported GitHub event text fields found."
+        }];
+}
+function addObjectText(inputs, label, value, keys) {
+    const object = asObject(value);
+    if (!object) {
+        return;
+    }
+    const lines = [];
+    for (const key of keys) {
+        const text = stringValue(object[key]);
+        if (text) {
+            lines.push(`${key}: ${text}`);
+        }
+    }
+    if (lines.length > 0) {
+        inputs.push({
+            path: label,
+            content: lines.join("\n")
+        });
+    }
+}
+function stringValue(value) {
+    return typeof value === "string" && value.trim().length > 0 ? value : undefined;
+}
+function asObject(value) {
+    return value && typeof value === "object" && !Array.isArray(value) ? value : undefined;
+}
+//# sourceMappingURL=githubContext.js.map

package/dist/src/githubContext.js.map

@@ -0,0 +1 @@
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package/dist/src/index.d.ts

@@ -0,0 +1,11 @@
+export { lintAgents, renderAgentsLintMarkdown } from "./agentsLint.js";
+export { analyzeInputs, analyzeTargets } from "./analyze.js";
+export { renderBenchmarkMarkdown, runBenchmark } from "./benchmark.js";
+export { doctorRepo } from "./doctor.js";
+export { compareAnalyses, evaluate } from "./eval.js";
+export { analyzeGithubEventContext, extractGithubContextInputs } from "./githubContext.js";
+export { postPullRequestComment } from "./github.js";
+export { initProject } from "./init.js";
+export { renderAgentsRules, renderComparison, renderDoctorMarkdown, renderDoctorPrComment, renderMarkdown, renderPrComment, renderSarif, renderSkill } from "./report.js";
+export { renderScorecardMarkdown, renderScorecardPrComment, runScorecard } from "./scorecard.js";
+export type { AnalysisResult, Finding, FindingKind, Severity } from "./types.js";

package/dist/src/index.js

@@ -0,0 +1,11 @@
+export { lintAgents, renderAgentsLintMarkdown } from "./agentsLint.js";
+export { analyzeInputs, analyzeTargets } from "./analyze.js";
+export { renderBenchmarkMarkdown, runBenchmark } from "./benchmark.js";
+export { doctorRepo } from "./doctor.js";
+export { compareAnalyses, evaluate } from "./eval.js";
+export { analyzeGithubEventContext, extractGithubContextInputs } from "./githubContext.js";
+export { postPullRequestComment } from "./github.js";
+export { initProject } from "./init.js";
+export { renderAgentsRules, renderComparison, renderDoctorMarkdown, renderDoctorPrComment, renderMarkdown, renderPrComment, renderSarif, renderSkill } from "./report.js";
+export { renderScorecardMarkdown, renderScorecardPrComment, runScorecard } from "./scorecard.js";
+//# sourceMappingURL=index.js.map

package/dist/src/index.js.map

@@ -0,0 +1 @@
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