tokenos 1.1.0

package/dist/test-phase3.js

@@ -0,0 +1,85 @@
+/**
+ * Phase 3 smoke test — run with: npm run test:phase3
+ *
+ * Verifies:
+ * 1. computeAllImportance runs and updates nodes
+ * 2. Classes score higher than imports (type weight)
+ * 3. Highly-referenced nodes score higher than isolated nodes
+ * 4. Hash-based skip works correctly on unchanged file
+ * 5. Re-index of modified content triggers re-index
+ */
+import { resolve, dirname } from "path";
+import { fileURLToPath } from "url";
+import { writeFileSync } from "fs";
+import { indexFile } from "./indexer/indexer.js";
+import { getNode, deleteNodesByFile, deleteEdgesByFile, getTopNodes } from "./db/index.js";
+import { computeAllImportance } from "./utils/scoring.js";
+const __dirname = dirname(fileURLToPath(import.meta.url));
+const FIXTURE = resolve(__dirname, "../test-fixtures/sample.ts");
+let passed = 0;
+let failed = 0;
+function assert(label, condition, detail) {
+    if (condition) {
+        console.log(`  ✅ ${label}`);
+        passed++;
+    }
+    else {
+        console.log(`  ❌ ${label}`, detail ?? "");
+        failed++;
+    }
+}
+async function run() {
+    console.log("\n=== Phase 3 Smoke Test (Scoring + Incremental) ===\n");
+    // ── Setup: fresh index of fixture
+    console.log("0. Setup: indexing fixture...");
+    deleteEdgesByFile(FIXTURE);
+    deleteNodesByFile(FIXTURE);
+    await indexFile(FIXTURE);
+    // ── Step 1: Compute importance
+    console.log("\n1. Computing importance scores...");
+    const { updated } = computeAllImportance();
+    assert("computeAllImportance updates nodes", updated > 0, updated);
+    // ── Step 2: Verify type weight
+    console.log("\n2. Verifying type weight (class > import)...");
+    const calcNode = getNode(`${FIXTURE}::Calculator`);
+    const importNode = getNode(`${FIXTURE}::import:fs/promises`);
+    assert("Calculator (class) node exists", !!calcNode);
+    assert("import node exists", !!importNode);
+    if (calcNode && importNode) {
+        assert("class importance > import importance", calcNode.importance > importNode.importance, { class: calcNode.importance, import: importNode.importance });
+    }
+    // ── Step 3: Top nodes list
+    console.log("\n3. Checking getTopNodes...");
+    const top = getTopNodes(5);
+    assert("getTopNodes returns results", top.length > 0, top.length);
+    assert("top nodes sorted desc", top[0].importance >= (top[1]?.importance ?? 0));
+    console.log("   Top nodes:");
+    top.forEach((n, i) => console.log(`     ${i + 1}. ${n.name} (${n.type}) — score: ${n.importance}`));
+    // ── Step 4: Hash-based skip on unchanged file
+    console.log("\n4. Hash-based skip on unchanged file...");
+    const result = await indexFile(FIXTURE);
+    assert("unchanged file is skipped", result.skipped, result);
+    // ── Step 5: Re-index after modification
+    console.log("\n5. Re-index after file modification...");
+    const originalContent = `// test-fixtures/sample.ts — used by test-phase1.ts`;
+    const modifiedContent = `// MODIFIED COMMENT — triggers re-index\n` + originalContent;
+    const tmpFixture = resolve(__dirname, "../test-fixtures/sample-modified.ts");
+    writeFileSync(tmpFixture, modifiedContent);
+    deleteEdgesByFile(tmpFixture);
+    deleteNodesByFile(tmpFixture);
+    const modResult = await indexFile(tmpFixture);
+    assert("modified file is indexed (not skipped)", !modResult.skipped, modResult);
+    assert("modified file creates nodes", modResult.nodes > 0, modResult.nodes);
+    // Cleanup temp file from DB
+    deleteEdgesByFile(tmpFixture);
+    deleteNodesByFile(tmpFixture);
+    // ── Summary
+    console.log(`\n=== Results: ${passed} passed, ${failed} failed ===\n`);
+    if (failed > 0)
+        process.exit(1);
+}
+run().catch((err) => {
+    console.error("Test runner error:", err);
+    process.exit(1);
+});
+//# sourceMappingURL=test-phase3.js.map

package/dist/test-phase3.js.map

@@ -0,0 +1 @@
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package/dist/types.d.ts

@@ -0,0 +1,73 @@
+export type NodeType = "function" | "class" | "file" | "import" | "variable" | "component" | "interface" | "type_alias" | "enum" | "route";
+export type EdgeType = "CALLS" | "IMPORTS" | "EXPORTS" | "EXTENDS" | "IMPLEMENTS" | "DEFINES" | "RENDERS" | "CONTAINS" | "TYPE_OF" | "PART_OF_TAB";
+export interface GraphNode {
+    id: string;
+    type: NodeType;
+    name: string;
+    file_path: string;
+    summary?: string;
+    code_snippet?: string;
+    embedding?: string;
+    meta?: string;
+    hash?: string;
+    importance: number;
+    created_at?: string;
+    updated_at?: string;
+}
+export interface GraphEdge {
+    id?: number;
+    from_node: string;
+    to_node: string;
+    type: EdgeType;
+}
+export interface ParsedNode {
+    id: string;
+    type: NodeType;
+    name: string;
+    file_path: string;
+    summary?: string;
+    code_snippet?: string;
+    meta?: string;
+    hash?: string;
+}
+export interface ParsedEdge {
+    from_node: string;
+    to_node: string;
+    type: EdgeType;
+}
+export interface SearchResult extends Omit<GraphNode, "embedding"> {
+    similarity?: number;
+}
+export interface GraphResponse {
+    nodes: Array<{
+        id: string;
+        name: string;
+        type: string;
+        summary?: string;
+        importance?: number;
+        meta?: Record<string, any>;
+    }>;
+    edges: Array<{
+        from: string;
+        to: string;
+        type: string;
+    }>;
+}
+export interface QueryOptions {
+    depth?: number;
+    includeCode?: boolean;
+    includeSummary?: boolean;
+    edgeTypes?: string[];
+    nodeTypes?: string[];
+}
+export type QueryMode = "explore" | "trace" | "dependency" | "semantic";
+export interface ConversationMemory {
+    id: string;
+    title: string;
+    summary: string;
+    key_points: string[];
+    tags: string[];
+    created_at: number;
+    embedding?: string;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/types.d.ts.map

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package/dist/types.js

@@ -0,0 +1,3 @@
+// Shared types for the TokenOS system
+export {};
+//# sourceMappingURL=types.js.map

package/dist/types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":"AAAA,sCAAsC"}

package/dist/utils/cache.d.ts

@@ -0,0 +1,12 @@
+export declare class LRUCache<K, V> {
+    private readonly store;
+    private readonly maxSize;
+    private readonly ttlMs;
+    constructor(maxSize?: number, ttlMs?: number);
+    get(key: K): V | undefined;
+    set(key: K, value: V): void;
+    has(key: K): boolean;
+    clear(): void;
+    get size(): number;
+}
+//# sourceMappingURL=cache.d.ts.map

package/dist/utils/cache.d.ts.map

@@ -0,0 +1 @@
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package/dist/utils/cache.js

@@ -0,0 +1,45 @@
+// Simple in-memory LRU cache — no external deps
+export class LRUCache {
+    store = new Map();
+    maxSize;
+    ttlMs;
+    constructor(maxSize = 500, ttlMs = 5 * 60 * 1000) {
+        this.maxSize = maxSize;
+        this.ttlMs = ttlMs;
+    }
+    get(key) {
+        const entry = this.store.get(key);
+        if (!entry)
+            return undefined;
+        if (Date.now() > entry.expiresAt) {
+            this.store.delete(key);
+            return undefined;
+        }
+        // Move to end (most-recently-used)
+        this.store.delete(key);
+        this.store.set(key, entry);
+        return entry.value;
+    }
+    set(key, value) {
+        // Evict LRU entry if at capacity
+        if (this.store.size >= this.maxSize) {
+            const oldestKey = this.store.keys().next().value;
+            if (oldestKey !== undefined)
+                this.store.delete(oldestKey);
+        }
+        this.store.set(key, {
+            value,
+            expiresAt: Date.now() + this.ttlMs,
+        });
+    }
+    has(key) {
+        return this.get(key) !== undefined;
+    }
+    clear() {
+        this.store.clear();
+    }
+    get size() {
+        return this.store.size;
+    }
+}
+//# sourceMappingURL=cache.js.map

package/dist/utils/cache.js.map

@@ -0,0 +1 @@
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package/dist/utils/logger.d.ts

@@ -0,0 +1,16 @@
+export declare const logger: {
+    info: (tag: string, message: string) => void;
+    success: (tag: string, message: string) => void;
+    warn: (tag: string, message: string) => void;
+    error: (tag: string, message: string, err?: any) => void;
+    viteLike: (params: {
+        version: string;
+        timeMs: number;
+        localUrl?: string;
+        ollamaOk?: boolean;
+        sqliteOk?: boolean;
+        cwd?: string;
+        model?: string;
+    }) => void;
+};
+//# sourceMappingURL=logger.d.ts.map

package/dist/utils/logger.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"logger.d.ts","sourceRoot":"","sources":["../../src/utils/logger.ts"],"names":[],"mappings":"AAiBA,eAAO,MAAM,MAAM;gBACL,MAAM,WAAW,MAAM;mBAGpB,MAAM,WAAW,MAAM;gBAG1B,MAAM,WAAW,MAAM;iBAGtB,MAAM,WAAW,MAAM,QAAQ,GAAG;uBAO5B;QACjB,OAAO,EAAE,MAAM,CAAC;QAChB,MAAM,EAAE,MAAM,CAAC;QACf,QAAQ,CAAC,EAAE,MAAM,CAAC;QAClB,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,GAAG,CAAC,EAAE,MAAM,CAAC;QACb,KAAK,CAAC,EAAE,MAAM,CAAC;KAChB;CAmBF,CAAC"}

package/dist/utils/logger.js

@@ -0,0 +1,52 @@
+import pc from "picocolors";
+function formatTag(tag) {
+    switch (tag) {
+        case "tokenos":
+            return pc.bold(pc.blue(`[${tag}]`));
+        case "indexer":
+            return pc.bold(pc.magenta(`[${tag}]`));
+        case "watcher":
+            return pc.bold(pc.cyan(`[${tag}]`));
+        case "embeddings":
+            return pc.bold(pc.yellow(`[${tag}]`));
+        default:
+            return pc.bold(pc.gray(`[${tag}]`));
+    }
+}
+export const logger = {
+    info: (tag, message) => {
+        console.error(`${formatTag(tag)} ${message}`);
+    },
+    success: (tag, message) => {
+        console.error(`${formatTag(tag)} ${pc.green(message)}`);
+    },
+    warn: (tag, message) => {
+        console.error(`${formatTag(tag)} ${pc.yellow(message)}`);
+    },
+    error: (tag, message, err) => {
+        if (err) {
+            console.error(`${formatTag(tag)} ${pc.red(message)}`, err);
+        }
+        else {
+            console.error(`${formatTag(tag)} ${pc.red(message)}`);
+        }
+    },
+    viteLike: (params) => {
+        console.error("");
+        console.error(`  ${pc.bold(pc.green("TOKENOS"))} ${pc.dim(`v${params.version}`)}  ready in ${pc.bold(`${params.timeMs} ms`)}`);
+        console.error("");
+        if (params.cwd) {
+            console.error(`  ${pc.green("➜")}  ${pc.bold("Watching:")} ${pc.cyan(params.cwd)}`);
+        }
+        if (params.localUrl) {
+            console.error(`  ${pc.green("➜")}  ${pc.bold("Local:")}    ${pc.cyan(params.localUrl)}`);
+        }
+        // Health checks
+        const ollamaStatus = params.ollamaOk ? pc.green("ok") : pc.red("offline");
+        const sqliteStatus = params.sqliteOk ? pc.green("ok") : pc.red("error");
+        console.error(`  ${pc.green("➜")}  ${pc.bold("Ollama:")}   ${ollamaStatus}${params.model ? ` ${pc.dim(`(${params.model})`)}` : ""}`);
+        console.error(`  ${pc.green("➜")}  ${pc.bold("SQLite:")}   ${sqliteStatus}`);
+        console.error("");
+    }
+};
+//# sourceMappingURL=logger.js.map

package/dist/utils/logger.js.map

@@ -0,0 +1 @@
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package/dist/utils/scoring.d.ts

@@ -0,0 +1,15 @@
+import type { GraphNode } from "../types.js";
+/**
+ * Compute and store importance scores for all nodes using batch SQL.
+ *
+ * Score = (inDegree * 2) + outDegree + typeWeight
+ *
+ * - inDegree (x2): more things depend on this → higher importance
+ * - outDegree: broader dependencies indicate a more central node
+ * - typeWeight: classes/functions preferred over imports
+ */
+export declare function computeAllImportance(): {
+    updated: number;
+};
+export declare function rankNodes(nodes: GraphNode[]): GraphNode[];
+//# sourceMappingURL=scoring.d.ts.map

package/dist/utils/scoring.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"scoring.d.ts","sourceRoot":"","sources":["../../src/utils/scoring.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C;;;;;;;;GAQG;AACH,wBAAgB,oBAAoB,IAAI;IAAE,OAAO,EAAE,MAAM,CAAA;CAAE,CAE1D;AAED,wBAAgB,SAAS,CAAC,KAAK,EAAE,SAAS,EAAE,GAAG,SAAS,EAAE,CAEzD"}

package/dist/utils/scoring.js

@@ -0,0 +1,17 @@
+import { batchComputeImportance } from "../db/index.js";
+/**
+ * Compute and store importance scores for all nodes using batch SQL.
+ *
+ * Score = (inDegree * 2) + outDegree + typeWeight
+ *
+ * - inDegree (x2): more things depend on this → higher importance
+ * - outDegree: broader dependencies indicate a more central node
+ * - typeWeight: classes/functions preferred over imports
+ */
+export function computeAllImportance() {
+    return batchComputeImportance();
+}
+export function rankNodes(nodes) {
+    return [...nodes].sort((a, b) => b.importance - a.importance);
+}
+//# sourceMappingURL=scoring.js.map

package/dist/utils/scoring.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"scoring.js","sourceRoot":"","sources":["../../src/utils/scoring.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,sBAAsB,EAAE,MAAM,gBAAgB,CAAC;AAGxD;;;;;;;;GAQG;AACH,MAAM,UAAU,oBAAoB;IAClC,OAAO,sBAAsB,EAAE,CAAC;AAClC,CAAC;AAED,MAAM,UAAU,SAAS,CAAC,KAAkB;IAC1C,OAAO,CAAC,GAAG,KAAK,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC,CAAC;AAChE,CAAC"}

package/dist/verify-parser.d.ts

@@ -0,0 +1,6 @@
+/**
+ * Parser verification script — validates semantic roles, tab detection, and meta.
+ * Run: npx tsx src/verify-parser.ts
+ */
+export {};
+//# sourceMappingURL=verify-parser.d.ts.map

package/dist/verify-parser.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"verify-parser.d.ts","sourceRoot":"","sources":["../src/verify-parser.ts"],"names":[],"mappings":"AAAA;;;GAGG"}

package/dist/verify-parser.js

@@ -0,0 +1,105 @@
+/**
+ * Parser verification script — validates semantic roles, tab detection, and meta.
+ * Run: npx tsx src/verify-parser.ts
+ */
+import { parseFile } from "./indexer/parser.js";
+import { resolve } from "path";
+const testFiles = [
+    resolve("dev-data/pattern-test.ts"),
+    resolve("dev-data/pattern-test.tsx"),
+];
+let allNodes = [];
+let allEdges = [];
+for (const filePath of testFiles) {
+    console.log(`\n${"=".repeat(56)}\nFILE: ${filePath.split("/").pop()}\n${"=".repeat(56)}`);
+    const { nodes, edges } = parseFile(filePath);
+    allNodes = [...allNodes, ...nodes];
+    allEdges = [...allEdges, ...edges];
+    // Nodes by type
+    const byType = {};
+    for (const n of nodes) {
+        (byType[n.type] ??= []).push(n.name);
+    }
+    console.log("\n📦 NODES:");
+    for (const [type, names] of Object.entries(byType)) {
+        console.log(`  ${type.padEnd(14)} (${names.length}): ${names.join(", ")}`);
+    }
+    // Edges by type
+    const byEdge = {};
+    for (const e of edges) {
+        byEdge[e.type] = (byEdge[e.type] ?? 0) + 1;
+    }
+    console.log("\n🔗 EDGES:", JSON.stringify(byEdge));
+    // JSX specific
+    const jsx = edges.filter((e) => ["RENDERS", "CONTAINS", "PART_OF_TAB"].includes(e.type));
+    if (jsx.length > 0) {
+        console.log("\n📐 JSX / Tab edges:");
+        for (const e of jsx) {
+            const from = e.from_node.split("::").pop();
+            const to = e.to_node.split("::").pop();
+            console.log(`  ${e.type.padEnd(14)}: ${from} → ${to}`);
+        }
+    }
+    // Meta output
+    const withMeta = nodes.filter((n) => n.meta);
+    if (withMeta.length > 0) {
+        console.log("\n🏷️  META:");
+        for (const n of withMeta) {
+            console.log(`  ${n.name.padEnd(20)} → ${n.meta}`);
+        }
+    }
+}
+console.log("\n\n✅ SUMMARY");
+console.log(`  Total nodes: ${allNodes.length}`);
+console.log(`  Total edges: ${allEdges.length}`);
+const types = [...new Set(allNodes.map((n) => n.type))].sort();
+const edgeTypes = [...new Set(allEdges.map((e) => e.type))].sort();
+console.log(`  Node types: ${types.join(", ")}`);
+console.log(`  Edge types: ${edgeTypes.join(", ")}`);
+// Assertions
+const expectedTypes = ["component", "enum", "file", "function", "import", "interface", "type_alias", "variable"];
+const missingTypes = expectedTypes.filter((t) => !types.includes(t));
+if (missingTypes.length === 0) {
+    console.log("\n✅ ALL expected node types present");
+}
+else {
+    console.error(`\n❌ Missing node types: ${missingTypes.join(", ")}`);
+    process.exit(1);
+}
+const expectedEdges = ["RENDERS", "CONTAINS", "PART_OF_TAB"];
+const missingEdges = expectedEdges.filter((t) => !edgeTypes.includes(t));
+if (missingEdges.length === 0) {
+    console.log("✅ ALL expected JSX/Tab edge types present");
+}
+else {
+    console.error(`❌ Missing edge types: ${missingEdges.join(", ")}`);
+    process.exit(1);
+}
+// Meta assertions
+const metaNodes = allNodes.filter((n) => n.meta);
+if (metaNodes.length > 0) {
+    console.log(`✅ ${metaNodes.length} nodes have semantic meta`);
+    // Check at least one has a role
+    const withRole = metaNodes.filter((n) => JSON.parse(n.meta).role);
+    if (withRole.length > 0) {
+        console.log(`✅ ${withRole.length} nodes have role assignments`);
+    }
+    else {
+        console.error("❌ No nodes have role assignments");
+        process.exit(1);
+    }
+    // Check at least one has tab
+    const withTab = metaNodes.filter((n) => JSON.parse(n.meta).tab);
+    if (withTab.length > 0) {
+        console.log(`✅ ${withTab.length} nodes have tab assignments`);
+    }
+    else {
+        console.error("❌ No nodes have tab assignments");
+        process.exit(1);
+    }
+}
+else {
+    console.error("❌ No nodes have semantic meta");
+    process.exit(1);
+}
+//# sourceMappingURL=verify-parser.js.map

package/dist/verify-parser.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -0,0 +1,52 @@
+{
+  "name": "tokenos",
+  "version": "1.1.0",
+  "description": "TokenOS is a memory layer for AI that reduces token usage by retrieving only the most relevant code and context.",
+  "type": "module",
+  "bin": {
+    "tokenos": "./dist/main.js"
+  },
+  "files": ["dist/", "README.md", "USAGE.md"],
+  "engines": {
+    "node": ">=18"
+  },
+  "keywords": [
+    "mcp",
+    "codebase",
+    "graph",
+    "ai",
+    "claude",
+    "cursor",
+    "antigravity-ide",
+    "ai-memory",
+    "memory",
+    "typescript"
+  ],
+  "license": "MIT",
+  "repository": {
+    "type": "git",
+    "url": "https://github.com/wripcode/tokenos"
+  },
+  "scripts": {
+    "build": "tsc",
+    "dev": "tsx src/main.ts",
+    "reset": "tsx src/reset.ts",
+    "index": "tsx src/indexer/cli.ts",
+    "prepublishOnly": "npm run build"
+  },
+  "dependencies": {
+    "@modelcontextprotocol/sdk": "^1.8.0",
+    "better-sqlite3": "^11.9.1",
+    "chokidar": "^4.0.3",
+    "ignore": "^7.0.5",
+    "picocolors": "^1.1.1",
+    "ts-morph": "^25.0.1",
+    "zod": "^4.3.6"
+  },
+  "devDependencies": {
+    "@types/better-sqlite3": "^7.6.12",
+    "@types/node": "^22.13.13",
+    "tsx": "^4.19.3",
+    "typescript": "^5.8.2"
+  }
+}