synapse-react-client 3.0.32 → 3.0.33

package/dist/umd.index.d.ts

@@ -6,12 +6,12 @@ import ShowDownloadV2 from './containers/download_list_v2/ShowDownloadV2';
 import EntityForm from './containers/EntityForm';
 import FavoritesPage from './containers/FavoritesPage';
 import FullWidthAlert from './containers/FullWidthAlert';
-import HasAccess from './containers/HasAccess';
-import { HasAccessV2 } from './containers/HasAccessV2';
+import { HasAccessV2 as HasAccess } from './containers/HasAccessV2';
 import Login from './containers/Login';
 import StatisticsPlot from './containers/StatisticsPlot';
 import { DatasetItemsEditor } from './containers/table/datasets/DatasetItemsEditor';
 import ProgrammaticTableDownload from './containers/table/table-top/ProgrammaticTableDownload';
+import { TrashCanList } from './containers/trash/TrashCanList';
 import UserProfileLinks from './containers/user_profile_links/UserProfileLinks';
 import './style/main.scss';
 import { SynapseClient, SynapseConstants } from './utils';
@@ -28,7 +28,6 @@ declare const SynapseComponents: {
     UserCard: import("react").FunctionComponent<import("./containers/UserCard").UserCardProps>;
     StatisticsPlot: typeof StatisticsPlot;
     HasAccess: typeof HasAccess;
-    HasAccessV2: typeof HasAccessV2;
     EvaluationCard: import("react").FunctionComponent<import("./containers/evaluation_queues/EvaluationCard").EvaluationCardProps>;
     EvaluationEditorPage: import("react").FunctionComponent<import("./containers/evaluation_queues/EvaluationEditorPage").EvaluationEditorPageProps>;
     AccessTokenPage: import("react").FunctionComponent<import("./containers/personal_access_token/AccessTokenPage").AccessTokenPageProps>;
@@ -65,6 +64,7 @@ declare const SynapseComponents: {
         type: import("./utils/synapseTypes").EntityType;
         style?: import("react").CSSProperties | undefined;
         className?: string | undefined;
+        includeTooltip?: boolean | undefined;
     }>;
     HelpPopover: import("react").FunctionComponent<import("./containers/HelpPopover").HelpPopoverProps>;
     ProgrammaticTableDownload: typeof ProgrammaticTableDownload;
@@ -78,6 +78,8 @@ declare const SynapseComponents: {
     ChangePassword: import("react").FunctionComponent<{}>;
     ForumSearch: (props: import("./containers/ForumSearch").ForumSearchProps) => JSX.Element;
     ReviewerDashboard: typeof ReviewerDashboard;
+    ProvenanceGraph: (props: import("./containers/provenance/ProvenanceGraph").ProvenanceProps) => JSX.Element;
+    TrashCanList: typeof TrashCanList;
 };
 declare const SynapseReactClientVersion: any;
 export { SynapseReactClientVersion, SynapseComponents, SynapseConstants, SynapseClient, SynapseContext, };

package/dist/umd.index.js

@@ -23,7 +23,6 @@ var EvaluationEditorPage_1 = require("./containers/evaluation_queues/EvaluationE
 var FavoritesPage_1 = tslib_1.__importDefault(require("./containers/FavoritesPage"));
 var ForumSearch_1 = tslib_1.__importDefault(require("./containers/ForumSearch"));
 var FullWidthAlert_1 = tslib_1.__importDefault(require("./containers/FullWidthAlert"));
-var HasAccess_1 = tslib_1.__importDefault(require("./containers/HasAccess"));
 var HasAccessV2_1 = require("./containers/HasAccessV2");
 var HelpPopover_1 = require("./containers/HelpPopover");
 var ProjectViewCarousel_1 = tslib_1.__importDefault(require("./containers/home_page/project_view_carousel/ProjectViewCarousel"));
@@ -43,8 +42,10 @@ var StandaloneQueryWrapper_1 = tslib_1.__importDefault(require("./containers/tab
 var ProgrammaticTableDownload_1 = tslib_1.__importDefault(require("./containers/table/table-top/ProgrammaticTableDownload"));
 var TermsAndConditions_1 = tslib_1.__importDefault(require("./containers/TermsAndConditions"));
 var ToastMessage_1 = require("./containers/ToastMessage");
+var TrashCanList_1 = require("./containers/trash/TrashCanList");
 var UserCard_1 = tslib_1.__importDefault(require("./containers/UserCard"));
 var UserProfileLinks_1 = tslib_1.__importDefault(require("./containers/user_profile_links/UserProfileLinks"));
+var ProvenanceGraph_1 = require("./containers/provenance/ProvenanceGraph");
 require("./style/main.scss");
 var utils_1 = require("./utils");
 Object.defineProperty(exports, "SynapseClient", { enumerable: true, get: function () { return utils_1.SynapseClient; } });
@@ -62,8 +63,7 @@ var SynapseComponents = {
     EntityForm: EntityForm_1.default,
     UserCard: UserCard_1.default,
     StatisticsPlot: StatisticsPlot_1.default,
-    HasAccess: HasAccess_1.default,
-    HasAccessV2: HasAccessV2_1.HasAccessV2,
+    HasAccess: HasAccessV2_1.HasAccessV2,
     EvaluationCard: EvaluationCard_1.EvaluationCard,
     EvaluationEditorPage: EvaluationEditorPage_1.EvaluationEditorPage,
     AccessTokenPage: AccessTokenPage_1.AccessTokenPage,
@@ -100,6 +100,8 @@ var SynapseComponents = {
     ChangePassword: ChangePassword_1.default,
     ForumSearch: ForumSearch_1.default,
     ReviewerDashboard: ReviewerDashboard_1.ReviewerDashboard,
+    ProvenanceGraph: ProvenanceGraph_1.ProvenanceGraph,
+    TrashCanList: TrashCanList_1.TrashCanList,
 };
 exports.SynapseComponents = SynapseComponents;
 // Include the version in the build

package/dist/umd.index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"umd.index.js","sourceRoot":"","sources":["../src/lib/umd.index.ts"],"names":[],"mappings":";;;;AAAA,uCAAoC;AACpC,oEAAkE;AAClE,oEAAkE;AAClE,uFAAwD;AACxD,+EAA6E;AAC7E,wFAAsF;AACtF,gIAAiG;AACjG,mFAAiF;AACjF,wGAAyE;AACzE,6GAA2G;AAC3G,wEAAsE;AACtE,kEAAgE;AAChE,+EAAgD;AAChD,sDAAwD;AACxD,wEAAsE;AACtE,6EAA8C;AAC9C,gFAA8E;AAC9E,4FAA0F;AAC1F,qFAAsD;AACtD,iFAAkD;AAClD,uFAAwD;AACxD,wDAAmE;AACnE,wDAAsD;AACtD,iIAAkG;AAClG,yEAA0C;AAC1C,qEAAsC;AACtC,6EAA8C;AAC9C,mFAAoD;AACpD,sFAAoF;AACpF,qFAAsD;AACtD,4FAA0F;AAC1F,wHAAyF;AACzF,uFAAwD;AACxD,gEAA8D;AAC9D,kEAAgE;AAChE,qFAAmF;AACnF,6GAA8E;AAC9E,6HAA8F;AAC9F,+FAAgE;AAChE,0DAA+E;AAC/E,gEAA8D;AAC9D,2EAA4C;AAC5C,8GAA+E;AAC/E,2EAAyE;AACzE,6BAA0B;AAC1B,iCAAyD;AAoEvD,8FApEO,qBAAa,OAoEP;AADb,iGAnEsB,wBAAgB,OAmEtB;AAlElB,yDAI+B;AAE/B,IAAM,cAAc,GAAG;IACrB,sBAAsB,yCAAA;IACtB,sBAAsB,yCAAA;IACtB,iBAAiB,oCAAA;CAClB,CAAA;AA0DC,wCAAc;AAxDhB,IAAM,iBAAiB,GAAG;IACxB,KAAK,iBAAA;IACL,SAAS,qBAAA;IACT,UAAU,sBAAA;IACV,QAAQ,oBAAA;IACR,cAAc,0BAAA;IACd,SAAS,2BAAA;IACT,cAAc,iCAAA;IACd,oBAAoB,6CAAA;IACpB,eAAe,mCAAA;IACf,iBAAiB,uCAAA;IACjB,kBAAkB,8BAAA;IAClB,YAAY,wBAAA;IACZ,mBAAmB,+BAAA;IACnB,eAAe,mCAAA;IACf,YAAY,6BAAA;IACZ,SAAS,qBAAA;IACT,gBAAgB,qCAAA;IAChB,gBAAgB,qCAAA;IAChB,cAAc,0BAAA;IACd,oBAAoB,6CAAA;IACpB,cAAc,EAAE,wBAAc;IAC9B,4BAA4B,6DAAA;IAC5B,gBAAgB,qCAAA;IAChB,aAAa,yBAAA;IACb,WAAW,2BAAA;IACX,qBAAqB,sCAAA;IACrB,YAAY,6BAAA;IACZ,OAAO,mBAAA;IACP,gBAAgB,4BAAA;IAChB,aAAa,yBAAA;IACb,kBAAkB,yCAAA;IAClB,cAAc,6BAAA;IACd,WAAW,2BAAA;IACX,yBAAyB,qCAAA;IACzB,0BAA0B,sCAAA;IAC1B,6BAA6B,+DAAA;IAC7B,cAAc,iCAAA;IACd,mBAAmB,+BAAA;IACnB,sBAAsB,kCAAA;IACtB,cAAc,0BAAA;IACd,WAAW,uBAAA;IACX,iBAAiB,uCAAA;IACjB,eAAe,mCAAA;IACf,YAAY,6BAAA;CACb,CAAA;AAQC,8CAAiB;AANnB,mCAAmC;AACnC,mJAAmJ;AACnJ,IAAM,yBAAyB,GAAG,OAAO,CAAC,oBAAoB,CAAC,CAAC,OAAO,CAAA;AAGrE,8DAAyB"}

package/dist/utils/APIConstants.d.ts

@@ -51,3 +51,11 @@ export declare const USER_GROUP_HEADERS: string;
 export declare const USER_GROUP_HEADERS_BATCH: string;
 export declare const DATA_ACCESS_SUBMISSION_BY_ID: (id: string | number) => string;
 export declare const PROFILE_IMAGE_PREVIEW: (userId: string) => string;
+export declare const APPROVED_SUBMISSION_INFO: (accessRequirementId: string | number) => string;
+export declare const EVALUATION: string;
+export declare const EVALUATION_BY_ID: (id: string | number) => string;
+export declare const ACTIVITY_FOR_ENTITY: (entityId: string, versionNumber?: string) => string;
+export declare const TRASHCAN: string;
+export declare const TRASHCAN_VIEW: string;
+export declare const TRASHCAN_RESTORE: (id: string) => string;
+export declare const TRASHCAN_PURGE: (id: string) => string;

package/dist/utils/APIConstants.js

@@ -3,7 +3,8 @@
  * Separating API endpoints into their own constants file
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.PROFILE_IMAGE_PREVIEW = exports.DATA_ACCESS_SUBMISSION_BY_ID = exports.USER_GROUP_HEADERS_BATCH = exports.USER_GROUP_HEADERS = exports.FAVORITES = exports.ACCESS_REQUIREMENT_WIKI_PAGE_KEY = exports.ACCESS_REQUIREMENT_STATUS = exports.ACCESS_REQUIREMENT_ACL = exports.ACCESS_REQUIREMENT_BY_ID = exports.ACCESS_REQUEST_SUBMISSION_SEARCH = exports.ACCESS_REQUIREMENT_SEARCH = exports.VERIFICATION_SUBMISSION = exports.SIGN_TERMS_OF_USE = exports.REGISTER_ACCOUNT_STEP_2 = exports.REGISTER_ACCOUNT_STEP_1 = exports.ALIAS_AVAILABLE = exports.NOTIFICATION_EMAIL = exports.USER_PROFILE_ID = exports.USER_PROFILE = exports.USER_ID_BUNDLE = exports.USER_ID = exports.USER_BUNDLE = exports.USER = exports.SCHEMA_VALIDATION_GET = exports.SCHEMA_VALIDATION_START = exports.REGISTERED_SCHEMA_ID = exports.REGISTERED_SCHEMA = exports.SCHEMA = exports.USER_PROFILE_ENDPOINT = exports.ASYNCHRONOUS_JOB_TOKEN = exports.TABLE_QUERY_ASYNC_GET = exports.TABLE_QUERY_ASYNC_START = exports.ENTITY_SCHEMA_VALIDATION = exports.ENTITY_SCHEMA_BINDING = exports.ENTITY_SCHEMA = exports.ENTITY_JSON = exports.ENTITY_HEADERS = exports.ENTITY_ACCESS = exports.ENTITY_BUNDLE_V2 = exports.ENTITY_ID_VERSIONS = exports.ENTITY_ID_VERSION = exports.ENTITY_ID = exports.ENTITY = exports.FILE = exports.AUTH = exports.REPO = exports.BACKEND_ENDPOINT = void 0;
+exports.EVALUATION_BY_ID = exports.EVALUATION = exports.APPROVED_SUBMISSION_INFO = exports.PROFILE_IMAGE_PREVIEW = exports.DATA_ACCESS_SUBMISSION_BY_ID = exports.USER_GROUP_HEADERS_BATCH = exports.USER_GROUP_HEADERS = exports.FAVORITES = exports.ACCESS_REQUIREMENT_WIKI_PAGE_KEY = exports.ACCESS_REQUIREMENT_STATUS = exports.ACCESS_REQUIREMENT_ACL = exports.ACCESS_REQUIREMENT_BY_ID = exports.ACCESS_REQUEST_SUBMISSION_SEARCH = exports.ACCESS_REQUIREMENT_SEARCH = exports.VERIFICATION_SUBMISSION = exports.SIGN_TERMS_OF_USE = exports.REGISTER_ACCOUNT_STEP_2 = exports.REGISTER_ACCOUNT_STEP_1 = exports.ALIAS_AVAILABLE = exports.NOTIFICATION_EMAIL = exports.USER_PROFILE_ID = exports.USER_PROFILE = exports.USER_ID_BUNDLE = exports.USER_ID = exports.USER_BUNDLE = exports.USER = exports.SCHEMA_VALIDATION_GET = exports.SCHEMA_VALIDATION_START = exports.REGISTERED_SCHEMA_ID = exports.REGISTERED_SCHEMA = exports.SCHEMA = exports.USER_PROFILE_ENDPOINT = exports.ASYNCHRONOUS_JOB_TOKEN = exports.TABLE_QUERY_ASYNC_GET = exports.TABLE_QUERY_ASYNC_START = exports.ENTITY_SCHEMA_VALIDATION = exports.ENTITY_SCHEMA_BINDING = exports.ENTITY_SCHEMA = exports.ENTITY_JSON = exports.ENTITY_HEADERS = exports.ENTITY_ACCESS = exports.ENTITY_BUNDLE_V2 = exports.ENTITY_ID_VERSIONS = exports.ENTITY_ID_VERSION = exports.ENTITY_ID = exports.ENTITY = exports.FILE = exports.AUTH = exports.REPO = exports.BACKEND_ENDPOINT = void 0;
+exports.TRASHCAN_PURGE = exports.TRASHCAN_RESTORE = exports.TRASHCAN_VIEW = exports.TRASHCAN = exports.ACTIVITY_FOR_ENTITY = void 0;
 var getEndpoint_1 = require("./functions/getEndpoint");
 exports.BACKEND_ENDPOINT = "".concat((0, getEndpoint_1.getEndpoint)(getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT));
 exports.REPO = "/repo/v1";
@@ -114,4 +115,21 @@ var PROFILE_IMAGE_PREVIEW = function (userId) {
     return "".concat(exports.REPO, "/userProfile/").concat(userId, "/image/preview");
 };
 exports.PROFILE_IMAGE_PREVIEW = PROFILE_IMAGE_PREVIEW;
+var APPROVED_SUBMISSION_INFO = function (accessRequirementId) { return (0, exports.ACCESS_REQUIREMENT_BY_ID)(accessRequirementId) + "/approvedSubmissionInfo"; };
+exports.APPROVED_SUBMISSION_INFO = APPROVED_SUBMISSION_INFO;
+exports.EVALUATION = "".concat(exports.REPO, "/evaluation");
+var EVALUATION_BY_ID = function (id) { return exports.EVALUATION + "/".concat(id); };
+exports.EVALUATION_BY_ID = EVALUATION_BY_ID;
+var ACTIVITY_FOR_ENTITY = function (entityId, versionNumber) {
+    return versionNumber
+        ? "".concat(exports.REPO, "/entity/").concat(entityId, "/version/").concat(versionNumber, "/generatedBy")
+        : "".concat(exports.REPO, "/entity/").concat(entityId, "/generatedBy");
+};
+exports.ACTIVITY_FOR_ENTITY = ACTIVITY_FOR_ENTITY;
+exports.TRASHCAN = "".concat(exports.REPO, "/trashcan");
+exports.TRASHCAN_VIEW = "".concat(exports.TRASHCAN, "/view");
+var TRASHCAN_RESTORE = function (id) { return "".concat(exports.TRASHCAN, "/restore/").concat(id); };
+exports.TRASHCAN_RESTORE = TRASHCAN_RESTORE;
+var TRASHCAN_PURGE = function (id) { return "".concat(exports.TRASHCAN, "/purge/").concat(id); };
+exports.TRASHCAN_PURGE = TRASHCAN_PURGE;
 //# sourceMappingURL=APIConstants.js.map

package/dist/utils/APIConstants.js.map

@@ -1 +1 @@
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package/dist/utils/SynapseClient.d.ts

@@ -1,6 +1,6 @@
 import { JSONSchema7 } from 'json-schema';
 import { BackendDestinationEnum, EndpointObject } from './functions/getEndpoint';
-import { AccessApproval, AccessCodeResponse, AccessControlList, AccessRequirement, AccessRequirementStatus, ACCESS_TYPE, ACTSubmissionStatus, AsynchronousJobStatus, BatchFileRequest, BatchFileResult, BulkFileDownloadRequest, BulkFileDownloadResponse, DownloadFromTableRequest, DownloadFromTableResult, DownloadList, DownloadOrder, Entity, EntityBundle, EntityBundleRequest, EntityHeader, EntityId, EntityJson, EntityLookupRequest, EntityPath, Evaluation, EvaluationRound, FileEntity, FileHandle, FileHandleAssociateType, FileHandleAssociation, FileHandleResults, FileResult, FileUploadComplete, FormData, FormGroup, ListRequest, ListResponse, LoginResponse, MultipartUploadRequest, MultipartUploadStatus, NotificationEmail, OAuthClientPublic, OAuthConsentGrantedResponse, ObjectType, OIDCAuthorizationRequest, OIDCAuthorizationRequestDescription, PaginatedResults, ProjectFilesStatisticsRequest, ProjectFilesStatisticsResponse, ProjectHeaderList, QueryBundleRequest, QueryResultBundle, QueryTableResults, ReferenceList, RestrictionInformationRequest, RestrictionInformationResponse, Submission as EvaluationSubmission, SynapseVersion, UserBundle, UserGroupHeaderResponsePage, UserProfile, VerificationSubmission, WikiPage, WikiPageKey } from './synapseTypes/';
+import { AccessApproval, AccessCodeResponse, AccessControlList, AccessRequirement, AccessRequirementStatus, ACCESS_TYPE, ACTSubmissionStatus, AsynchronousJobStatus, BatchFileRequest, BatchFileResult, BulkFileDownloadRequest, BulkFileDownloadResponse, DownloadFromTableRequest, DownloadFromTableResult, DownloadList, DownloadOrder, Entity, EntityBundle, EntityBundleRequest, EntityHeader, EntityId, EntityJson, EntityLookupRequest, EntityPath, Evaluation, EvaluationRound, FileEntity, FileHandle, FileHandleAssociateType, FileHandleAssociation, FileHandleResults, FileResult, FileUploadComplete, FormData, FormGroup, ListRequest, ListResponse, LoginResponse, MultipartUploadRequest, MultipartUploadStatus, NotificationEmail, OAuthClientPublic, OAuthConsentGrantedResponse, ObjectType, OIDCAuthorizationRequest, OIDCAuthorizationRequestDescription, PaginatedResults, ProjectFilesStatisticsRequest, ProjectFilesStatisticsResponse, ProjectHeaderList, QueryBundleRequest, QueryResultBundle, QueryTableResults, ReferenceList, RestrictionInformationRequest, RestrictionInformationResponse, Submission as EvaluationSubmission, SynapseVersion, TrashedEntity, UserBundle, UserGroupHeaderResponsePage, UserProfile, VerificationSubmission, WikiPage, WikiPageKey } from './synapseTypes/';
 import { CreateSubmissionRequest, ManagedACTAccessRequirementStatus, RequestInterface } from './synapseTypes/AccessRequirement';
 import { AccessRequirementSearchRequest, AccessRequirementSearchResponse } from './synapseTypes/AccessRequirement/AccessRequirementSearch';
 import { RenewalInterface } from './synapseTypes/AccessRequirement/RenewalInterface';
@@ -42,6 +42,8 @@ import { AccessApprovalSearchRequest, AccessApprovalSearchResponse } from './syn
 import { SubmissionSearchRequest, SubmissionSearchResponse } from './synapseTypes/AccessSubmission';
 import { SubmissionInfoPage, SubmissionInfoPageRequest } from './synapseTypes/SubmissionInfo';
 import { Submission as DataAccessSubmission } from './synapseTypes/AccessRequirement/Submission';
+import { OAuthClient, OAuthClientList } from './synapseTypes/OAuthClient';
+import { Activity } from './synapseTypes/Provenance/Provenance';
 export declare const IS_OUTSIDE_SYNAPSE_ORG: boolean;
 export declare const ACCESS_TOKEN_COOKIE_KEY = "org.sagebionetworks.security.user.login.token";
 export declare const SYNAPSE_STORAGE_LOCATION_ID = 1;
@@ -247,11 +249,7 @@ export declare const getBulkFiles: (bulkFileDownloadRequest: BulkFileDownloadReq
  * https://rest-docs.synapse.org/rest/org/sagebionetworks/repo/model/Entity.html
  */
 export declare const getEntity: <T extends Entity>(accessToken: string | undefined, entityId: string, versionNumber?: string) => Promise<T>;
-/**
- * Get a list of entity headers given by entity ids
- * http://rest-docs.synapse.org/rest/GET/entity/type.html
- */
-export declare const getEntityHeadersByIds: <T extends PaginatedResults<EntityHeader>>(entityIds: string[], accessToken?: string) => Promise<T>;
+export declare const getEntityHeadersByIds: (entityIds: string[], accessToken?: string) => Promise<PaginatedResults<EntityHeader>>;
 /**
  * Get the EntityHeader for a list of references with a POST.
  * If any item in the batch fails (e.g., with a 404) it will be EXCLUDED in the result set.
@@ -332,7 +330,7 @@ export declare const setAccessTokenCookie: (token: string | undefined, sessionCa
  * Get the current access token from a cookie.  Note that this will only succeed if your app is running on
  * a .synapse.org subdomain.
  */
-export declare const getAccessTokenFromCookie: () => Promise<any>;
+export declare const getAccessTokenFromCookie: () => Promise<string>;
 export declare const getUseUtcTimeFromCookie: () => boolean;
 export declare const getPrincipalAliasRequest: (accessToken: string | undefined, alias: string, type: string) => Promise<{
     principalId: number;
@@ -452,6 +450,29 @@ export declare const hasUserAuthorizedOAuthClient: (oidcAuthRequest: OIDCAuthori
  * Get OAuth2 Client information (available to the public)
  */
 export declare const getOAuth2Client: (clientId: string) => Promise<OAuthClientPublic>;
+/**
+ List the OAuth 2.0 clients created by the current user.
+ */
+export declare const getOAuth2: (accessToken: string, nextPageToken?: string) => Promise<OAuthClientList>;
+/**
+Create an OAuth 2.0 client.
+Note: The client name must be unique.
+Note: After creating the client one must also set the client secret and have their client verified
+https://rest-docs.synapse.org/rest/POST/oauth2/client.html
+ */
+export declare const createOAuthClient: (request: OAuthClient, accessToken: string) => Promise<OAuthClient>;
+/**
+Delete OAuth 2.0 client
+https://rest-docs.synapse.org/rest/DELETE/oauth2/client/id.html
+ */
+export declare const deleteOAuthClient: (id: string, accessToken: string) => Promise<void>;
+/**
+ Update the metadata for an existing OAuth 2.0 client.
+ Note: Only the creator of a client can update it.
+ Note: Changing the redirect URIs will revert the 'verified' status of the client, necessitating re-verification.
+ https://repo-prod.prod.sagebase.org/auth/v1/oauth2/client/{id}
+ */
+export declare const updateOAuthClient: (request: OAuthClient, accessToken: string) => Promise<OAuthClient>;
 /**
  * Get OAuth2 Client information (available to the public)
  */
@@ -750,7 +771,7 @@ export declare const registerAccountStep2: (accountSetupInfo: AccountSetupInfo)
  * @param {*} redirectUrl
  * @param {*} endpoint
  */
-export declare const oAuthRegisterAccountStep2: (userName: string, provider: string, authenticationCode: string | number, redirectUrl: string, endpoint?: any) => Promise<LoginResponse>;
+export declare const oAuthRegisterAccountStep2: (userName: string, provider: string, authenticationCode: string | number, redirectUrl: string, endpoint?: BackendDestinationEnum) => Promise<LoginResponse>;
 /**
  * Bind OAuth account to Synapse account as a new 'alias'.
  * https://rest-docs.synapse.org/rest/POST/oauth2/alias.html
@@ -759,7 +780,7 @@ export declare const oAuthRegisterAccountStep2: (userName: string, provider: str
  * @param {*} redirectUrl
  * @param {*} endpoint
  */
-export declare const bindOAuthProviderToAccount: (provider: string, authenticationCode: string | number, redirectUrl: string, endpoint?: any) => Promise<LoginResponse>;
+export declare const bindOAuthProviderToAccount: (provider: string, authenticationCode: string | number, redirectUrl: string, endpoint?: BackendDestinationEnum) => Promise<LoginResponse>;
 /**
  * Remove an alias associated with an account via the OAuth mechanism.
  * http://rest-docs.synapse.org/rest/DELETE/oauth2/alias.html
@@ -862,6 +883,10 @@ export declare const searchAccessSubmission: (submissionSearchRequest: Submissio
  * http://rest-docs.synapse.org/rest/POST/accessRequirement/requirementId/approvedSubmissionInfo.html
  */
 export declare const getApprovedSubmissionInfo: (submissionInfoPageRequest: SubmissionInfoPageRequest, accessToken: string | undefined) => Promise<SubmissionInfoPage>;
+/**
+ * http://rest-docs.synapse.org/rest/GET/activity/id/generated.html
+ */
+export declare const getActivityForEntity: (entityId: string, versionNumber?: number, accessToken?: string) => Promise<Activity>;
 /**
  * Returns the presigned URL for a user's profile pic. Note that the presigned URL
  * expires after a short time, so it should be used immediately.
@@ -870,3 +895,6 @@ export declare const getApprovedSubmissionInfo: (submissionInfoPageRequest: Subm
  *   does not have a profile image
  */
 export declare function getProfilePicPreviewPresignedUrl(userId: string): Promise<string | null>;
+export declare function getItemsInTrashCan(accessToken: string | undefined, offset?: number, limit?: number): Promise<PaginatedResults<TrashedEntity>>;
+export declare function restoreFromTrashCan(entityId: string, accessToken: string | undefined): Promise<void>;
+export declare function purgeFromTrashCan(entityId: string, accessToken: string | undefined): Promise<void>;

package/dist/utils/SynapseClient.js

@@ -1,9 +1,9 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.getTeamList = exports.getUserTeamList = exports.getUserChallenges = exports.removeUserFavorite = exports.getUserFavorites = exports.getEntityWiki = exports.getEntityBundleV2 = exports.deleteEntity = exports.updateEntity = exports.getEntityHeader = exports.getEntityHeaders = exports.getEntityHeadersByIds = exports.getEntity = exports.getBulkFiles = exports.getFiles = exports.lookupChildEntity = exports.getEntityChildren = exports.getUserProfiles = exports.getGroupHeadersBatch = exports.getUserGroupHeaders = exports.updateMyUserProfile = exports.getMyUserBundle = exports.getUserBundle = exports.getUserProfileById = exports.getUserProfile = exports.createProject = exports.createEntity = exports.oAuthSessionRequest = exports.oAuthUrlRequest = exports.login = exports.getFullQueryTableResults = exports.getQueryTableResults = exports.getQueryTableAsyncJobResults = exports.getAsyncResultBodyFromJobId = exports.getAsyncResultFromJobId = exports.getFileHandleByIdURL = exports.getActualFileHandleByIdURL = exports.getFileHandleById = exports.getDownloadFromTableRequest = exports.getVersion = exports.doPut = exports.doDelete = exports.doGet = exports.doPost = exports.allowNotFoundError = exports.delay = exports.getRootURL = exports.SYNAPSE_STORAGE_LOCATION_ID = exports.ACCESS_TOKEN_COOKIE_KEY = exports.IS_OUTSIDE_SYNAPSE_ORG = void 0;
-exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.getStyleguideStack = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = void 0;
-exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.updateSubmissionStatus = exports.getSubmissionById = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.searchAccessRequirements = exports.getAccessRequirementAcl = exports.getAccessRequirementById = exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = exports.acceptFormData = void 0;
-exports.getProfilePicPreviewPresignedUrl = exports.getApprovedSubmissionInfo = exports.searchAccessSubmission = exports.searchAccessApprovals = exports.forumSearch = exports.getThreadMessageUrl = exports.getThread = exports.getReplyMessageUrl = exports.getReply = exports.updateNotificationEmail = exports.deleteEmail = exports.addEmailAddressStep2 = exports.addEmailAddressStep1 = exports.resetPassword = exports.changePasswordWithToken = exports.changePasswordWithCurrentPassword = exports.createProfileVerificationSubmission = exports.signSynapseTermsOfUse = exports.unbindOAuthProviderToAccount = exports.bindOAuthProviderToAccount = exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = void 0;
+exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.updateOAuthClient = exports.deleteOAuthClient = exports.createOAuthClient = exports.getOAuth2 = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.getStyleguideStack = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = void 0;
+exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.updateSubmissionStatus = exports.getSubmissionById = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.searchAccessRequirements = exports.getAccessRequirementAcl = exports.getAccessRequirementById = exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = exports.acceptFormData = exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = void 0;
+exports.purgeFromTrashCan = exports.restoreFromTrashCan = exports.getItemsInTrashCan = exports.getProfilePicPreviewPresignedUrl = exports.getActivityForEntity = exports.getApprovedSubmissionInfo = exports.searchAccessSubmission = exports.searchAccessApprovals = exports.forumSearch = exports.getThreadMessageUrl = exports.getThread = exports.getReplyMessageUrl = exports.getReply = exports.updateNotificationEmail = exports.deleteEmail = exports.addEmailAddressStep2 = exports.addEmailAddressStep1 = exports.resetPassword = exports.changePasswordWithToken = exports.changePasswordWithCurrentPassword = exports.createProfileVerificationSubmission = exports.signSynapseTermsOfUse = exports.unbindOAuthProviderToAccount = exports.bindOAuthProviderToAccount = exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = void 0;
 var tslib_1 = require("tslib");
 var spark_md5_1 = tslib_1.__importDefault(require("spark-md5"));
 var universal_cookie_1 = tslib_1.__importDefault(require("universal-cookie"));
@@ -620,12 +620,8 @@ var getEntity = function (accessToken, entityId, versionNumber) {
     return (0, exports.doGet)(url, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getEntity = getEntity;
-/**
- * Get a list of entity headers given by entity ids
- * http://rest-docs.synapse.org/rest/GET/entity/type.html
- */
 var getEntityHeadersByIds = function (entityIds, accessToken) {
-    return (0, exports.doGet)("/repo/v1/entity/type?batch=".concat(entityIds.join(',')), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.getEntityHeaders)(entityIds.map(function (id) { return ({ targetId: id }); }), accessToken);
 };
 exports.getEntityHeadersByIds = getEntityHeadersByIds;
 /**
@@ -853,7 +849,7 @@ exports.setAccessTokenCookie = setAccessTokenCookie;
 var getAccessTokenFromCookie = function () { return tslib_1.__awaiter(void 0, void 0, void 0, function () {
     return tslib_1.__generator(this, function (_a) {
         if (exports.IS_OUTSIDE_SYNAPSE_ORG) {
-            return [2 /*return*/, cookies.get(exports.ACCESS_TOKEN_COOKIE_KEY)];
+            return [2 /*return*/, Promise.resolve(cookies.get(exports.ACCESS_TOKEN_COOKIE_KEY))];
         }
         return [2 /*return*/, (0, exports.doGet)('Portal/sessioncookie?validate=true', undefined, 'include', getEndpoint_1.BackendDestinationEnum.PORTAL_ENDPOINT)];
     });
@@ -1311,7 +1307,7 @@ var getEvaluation = function (evalId, accessToken) {
         // without an evalId is a valid API that returns a different API response
         return Promise.reject(new Error('evalId is empty'));
     }
-    return (0, exports.doGet)("/repo/v1/evaluation/".concat(evalId), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.doGet)((0, APIConstants_1.EVALUATION_BY_ID)(evalId), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getEvaluation = getEvaluation;
 /**
@@ -1324,7 +1320,7 @@ var updateEvaluation = function (evaluation, accessToken) {
         // without an evalId is a valid API that returns a different API response
         return Promise.reject(new Error('evaluation does not have an ID'));
     }
-    return (0, exports.doPut)("/repo/v1/evaluation/".concat(evaluation.id), evaluation, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.doPut)((0, APIConstants_1.EVALUATION_BY_ID)(evaluation.id), evaluation, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.updateEvaluation = updateEvaluation;
 /**
@@ -1332,7 +1328,7 @@ exports.updateEvaluation = updateEvaluation;
  * https://rest-docs.synapse.org/rest/POST/evaluation.html
  */
 var createEvaluation = function (evaluation, accessToken) {
-    return (0, exports.doPost)('/repo/v1/evaluation/', evaluation, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.doPost)(APIConstants_1.EVALUATION, evaluation, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.createEvaluation = createEvaluation;
 /**
@@ -1415,6 +1411,41 @@ var getOAuth2Client = function (clientId) {
     return (0, exports.doGet)("/auth/v1/oauth2/client/".concat(clientId), undefined, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getOAuth2Client = getOAuth2Client;
+/**
+ List the OAuth 2.0 clients created by the current user.
+ */
+var getOAuth2 = function (accessToken, nextPageToken) {
+    return (0, exports.doGet)("/auth/v1/oauth2/client".concat(nextPageToken ? '?nextPageToken=' + nextPageToken : ''), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getOAuth2 = getOAuth2;
+/**
+Create an OAuth 2.0 client.
+Note: The client name must be unique.
+Note: After creating the client one must also set the client secret and have their client verified
+https://rest-docs.synapse.org/rest/POST/oauth2/client.html
+ */
+var createOAuthClient = function (request, accessToken) {
+    return (0, exports.doPost)('/auth/v1/oauth2/client', request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.createOAuthClient = createOAuthClient;
+/**
+Delete OAuth 2.0 client
+https://rest-docs.synapse.org/rest/DELETE/oauth2/client/id.html
+ */
+var deleteOAuthClient = function (id, accessToken) {
+    return (0, exports.doDelete)("/auth/v1/oauth2/client/".concat(id), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.deleteOAuthClient = deleteOAuthClient;
+/**
+ Update the metadata for an existing OAuth 2.0 client.
+ Note: Only the creator of a client can update it.
+ Note: Changing the redirect URIs will revert the 'verified' status of the client, necessitating re-verification.
+ https://repo-prod.prod.sagebase.org/auth/v1/oauth2/client/{id}
+ */
+var updateOAuthClient = function (request, accessToken) {
+    return (0, exports.doPut)("/auth/v1/oauth2/client/".concat(request.client_id), request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.updateOAuthClient = updateOAuthClient;
 /**
  * Get OAuth2 Client information (available to the public)
  */
@@ -2235,9 +2266,17 @@ exports.searchAccessSubmission = searchAccessSubmission;
  * http://rest-docs.synapse.org/rest/POST/accessRequirement/requirementId/approvedSubmissionInfo.html
  */
 var getApprovedSubmissionInfo = function (submissionInfoPageRequest, accessToken) {
-    return (0, exports.doPost)("/repo/v1/accessRequirement/".concat(submissionInfoPageRequest.accessRequirementId, "/approvedSubmissionInfo"), submissionInfoPageRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    return (0, exports.doPost)((0, APIConstants_1.APPROVED_SUBMISSION_INFO)(submissionInfoPageRequest.accessRequirementId), submissionInfoPageRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getApprovedSubmissionInfo = getApprovedSubmissionInfo;
+/**
+ * http://rest-docs.synapse.org/rest/GET/activity/id/generated.html
+ */
+var getActivityForEntity = function (entityId, versionNumber, accessToken) {
+    var url = (0, APIConstants_1.ACTIVITY_FOR_ENTITY)(entityId, versionNumber ? "".concat(versionNumber) : undefined);
+    return (0, exports.doGet)(url, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getActivityForEntity = getActivityForEntity;
 /**
  * Returns the presigned URL for a user's profile pic. Note that the presigned URL
  * expires after a short time, so it should be used immediately.
@@ -2251,4 +2290,18 @@ function getProfilePicPreviewPresignedUrl(userId) {
     });
 }
 exports.getProfilePicPreviewPresignedUrl = getProfilePicPreviewPresignedUrl;
+function getItemsInTrashCan(accessToken, offset, limit) {
+    if (offset === void 0) { offset = 0; }
+    if (limit === void 0) { limit = 25; }
+    return (0, exports.doGet)(APIConstants_1.TRASHCAN_VIEW + "?offset=".concat(offset, "&limit=").concat(limit), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+}
+exports.getItemsInTrashCan = getItemsInTrashCan;
+function restoreFromTrashCan(entityId, accessToken) {
+    return (0, exports.doPut)((0, APIConstants_1.TRASHCAN_RESTORE)(entityId), undefined, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+}
+exports.restoreFromTrashCan = restoreFromTrashCan;
+function purgeFromTrashCan(entityId, accessToken) {
+    return (0, exports.doPut)((0, APIConstants_1.TRASHCAN_PURGE)(entityId), undefined, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+}
+exports.purgeFromTrashCan = purgeFromTrashCan;
 //# sourceMappingURL=SynapseClient.js.map