npm - synapse-react-client - Versions diffs - 3.0.29 → 3.0.30 - Mend

synapse-react-client 3.0.29 → 3.0.30

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package/dist/containers/entity_finder/tree/VirtualizedTree.js.map CHANGED Viewed

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package/dist/containers/personal_access_token/AccessTokenCard.js CHANGED Viewed

@@ -6,10 +6,10 @@ var moment_1 = tslib_1.__importDefault(require("moment"));
 var react_1 = tslib_1.__importStar(require("react"));
 var react_bootstrap_1 = require("react-bootstrap");
 var react_error_boundary_1 = require("react-error-boundary");
-var react_tooltip_1 = tslib_1.__importDefault(require("react-tooltip"));
 var utils_1 = require("../../utils/");
 var SynapseContext_1 = require("../../utils/SynapseContext");
 var ScopeDescriptions_1 = require("../../utils/synapseTypes/AccessToken/ScopeDescriptions");
+var Tooltip_1 = tslib_1.__importDefault(require("../../utils/tooltip/Tooltip"));
 var IconSvg_1 = tslib_1.__importDefault(require("../IconSvg"));
 var WarningModal_1 = tslib_1.__importDefault(require("../synapse_form_wrapper/WarningModal"));
 var AccessTokenCard = function (_a) {
@@ -18,11 +18,6 @@ var AccessTokenCard = function (_a) {
     var _b = (0, react_1.useState)(false), showModal = _b[0], setShowModal = _b[1];
     var handleError = (0, react_error_boundary_1.useErrorHandler)();
     var isExpired = accessToken.state === 'EXPIRED';
-    (0, react_1.useEffect)(function () {
-        // For reasons unknown, the tooltips in this component would not load in Synapse.org without this
-        // see https://github.com/wwayne/react-tooltip/issues/344
-        react_tooltip_1.default.rebuild();
-    }, []);
     return (react_1.default.createElement("div", { className: 'cardContainer PersonalAccessTokenCard' +
             (isExpired ? ' bg-warning' : '') },
         react_1.default.createElement(WarningModal_1.default, { title: 'Confirm Deletion', modalBody: react_1.default.createElement(react_1.default.Fragment, null,
@@ -39,10 +34,10 @@ var AccessTokenCard = function (_a) {
             }, confirmButtonVariant: "danger", show: showModal, onConfirmCallbackArgs: [accessToken.id, authToken] }),
         react_1.default.createElement("div", { className: "SRC-cardContent" },
             react_1.default.createElement("div", { className: "SRC-eqHeightRow SRC-userCardName" },
-                react_1.default.createElement(react_tooltip_1.default, { delayShow: 100 }),
                 react_1.default.createElement("span", { className: 'SRC-blackText' }, accessToken.name),
-                isExpired && (react_1.default.createElement("span", { "data-tip": 'This token has expired. It no longer works and can only be deleted.', "aria-hidden": "true" },
-                    react_1.default.createElement(IconSvg_1.default, { options: { icon: 'warning' } })))),
+                isExpired && (react_1.default.createElement(Tooltip_1.default, { title: "This token has expired. It no longer works and can only be deleted.", enterNextDelay: 100 },
+                    react_1.default.createElement("span", { "aria-hidden": "true" },
+                        react_1.default.createElement(IconSvg_1.default, { options: { icon: 'warning' } }))))),
             react_1.default.createElement("div", { className: "SRC-eqHeightRow" },
                 react_1.default.createElement("span", null, "Permissions: "),
                 accessToken.scopes.map(function (scope) {

package/dist/containers/personal_access_token/AccessTokenCard.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/containers/table/SynapseTable.d.ts CHANGED Viewed

@@ -54,6 +54,10 @@ export default class SynapseTable extends React.Component<SynapseTableProps, Syn
      * Display the view
      */
     render(): JSX.Element;
+    /**
+     * handle copy IDs to clipboard
+     */
+    handleCopyIdsToClipboard: (columnIndex: number) => void;
     /**
      * If this is a view/dataset and rows have an ID, then rows represent individual objects in Synapse.
      * Presence of row IDs also indicates that the query is also necessarily not summary data, e.g. the query does

package/dist/containers/table/SynapseTable.js CHANGED Viewed

@@ -30,6 +30,8 @@ var SynapseTableConstants_1 = require("./SynapseTableConstants");
 var SynapseTableUtils_1 = require("./SynapseTableUtils");
 var TablePagination_1 = require("./TablePagination");
 var NoContentAvailable_1 = tslib_1.__importDefault(require("./NoContentAvailable"));
+var InteractiveCopyIdsIcon_1 = require("../InteractiveCopyIdsIcon");
+var ToastMessage_1 = require("../ToastMessage");
 exports.EMPTY_HEADER = {
     id: '',
     name: '',
@@ -55,6 +57,22 @@ var SynapseTable = /** @class */ (function (_super) {
     function SynapseTable(props) {
         var _this = _super.call(this, props) || this;
         _this.tableElement = undefined;
+        /**
+         * handle copy IDs to clipboard
+         */
+        _this.handleCopyIdsToClipboard = function (columnIndex) {
+            var data = _this.props.queryContext.data;
+            var rows = data.queryResult.queryResults.rows;
+            var synIDs = rows
+                .map(function (row) {
+                return "".concat(row.values[columnIndex]);
+            })
+                .join('\n');
+            // https://caniuse.com/mdn-api_clipboard_writetext
+            navigator.clipboard.writeText(synIDs).then(function () {
+                (0, ToastMessage_1.displayToast)('Successfully copied to clipboard');
+            });
+        };
         _this.showGroupRowData = function (selectedRow) {
             // magic happens - parse query, deep copy query bundle request, modify, encode, send to Synapse.org.  Easy!
             var queryCopy = _this.props.queryContext.getLastQueryRequest().query;
@@ -167,6 +185,7 @@ var SynapseTable = /** @class */ (function (_super) {
         _this.disableResize = _this.disableResize.bind(_this);
         _this.isEntityViewOrDataset = _this.isEntityViewOrDataset.bind(_this);
         _this.allRowsHaveId = _this.allRowsHaveId.bind(_this);
+        _this.handleCopyIdsToClipboard = _this.handleCopyIdsToClipboard.bind(_this);
         // store the offset and sorted selection that is currently held
         _this.state = {
             /* columnIconSortState tells what icon to display for a table
@@ -541,6 +560,8 @@ var SynapseTable = /** @class */ (function (_super) {
                 var displayColumnName = (0, unCamelCase_1.unCamelCase)(column.name, facetAliases);
                 var columnModel = columnModels.find(function (el) { return el.name === column.name; });
                 var isLockedFacetColumn = column.name.toLowerCase() === ((_a = lockedFacet === null || lockedFacet === void 0 ? void 0 : lockedFacet.facet) === null || _a === void 0 ? void 0 : _a.toLowerCase()); // used in details page to disable filter the column
+                var isEntityIDColumn = columnModel.name == 'id' &&
+                    columnModel.columnType == synapseTypes_1.ColumnType.ENTITYID;
                 return (React.createElement("th", { key: column.name },
                     React.createElement("div", { className: "SRC-split" },
                         React.createElement("span", { style: { whiteSpace: 'nowrap' } }, displayColumnName),
@@ -555,7 +576,10 @@ var SynapseTable = /** @class */ (function (_super) {
                                     index: index,
                                     name: column.name,
                                 }) },
-                                React.createElement(utils_2.Icon, { type: SynapseTableConstants_1.ICON_STATE[columnIndex], cssClass: isSelectedIconClass })))))));
+                                React.createElement(utils_2.Icon, { type: SynapseTableConstants_1.ICON_STATE[columnIndex], cssClass: isSelectedIconClass }))),
+                            isEntityIDColumn && (React.createElement(InteractiveCopyIdsIcon_1.InteractiveCopyIdsIcon, { onCopy: function () {
+                                    _this.handleCopyIdsToClipboard(index);
+                                } }))))));
             }
             else {
                 return React.createElement("th", { className: "SRC-hidden", key: column.name });

package/dist/containers/table/SynapseTable.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/containers/table/datasets/DatasetItemsEditor.d.ts CHANGED Viewed

@@ -1,5 +1,5 @@
 /// <reference types="react" />
-import { DatasetItem } from '../../../utils/synapseTypes';
+import { EntityRef } from '../../../utils/synapseTypes';
 export declare const ADD_FILES = "Add Files";
 export declare const REMOVE_FILES = "Remove Files";
 export declare const NO_FILES_IN_THIS_DATASET = "No files in this Dataset";
@@ -11,7 +11,7 @@ export declare type DatasetItemsEditorProps = {
     onSave?: () => void;
     onClose?: () => void;
 };
-export declare type DatasetItemsEditorTableData = DatasetItem & {
+export declare type DatasetItemsEditorTableData = EntityRef & {
     isSelected: boolean;
     setSelected: (value: boolean) => void;
 };

package/dist/containers/table/datasets/DatasetItemsEditor.js CHANGED Viewed

@@ -4,20 +4,20 @@ exports.DatasetItemsEditor = exports.DATASET_SAVED = exports.CREATE_VERSION_TO_F
 var tslib_1 = require("tslib");
 var lab_1 = require("@material-ui/lab");
 var react_base_table_1 = tslib_1.__importStar(require("@sage-bionetworks/react-base-table"));
+var lodash_es_1 = require("lodash-es");
 var react_1 = tslib_1.__importStar(require("react"));
 var react_bootstrap_1 = require("react-bootstrap");
-var react_tooltip_1 = tslib_1.__importDefault(require("react-tooltip"));
 var SkeletonTable_1 = require("../../../assets/skeletons/SkeletonTable");
 var TooltipUtils_1 = require("../../../utils/functions/TooltipUtils");
 var useEntity_1 = require("../../../utils/hooks/SynapseAPI/entity/useEntity");
 var useSet_1 = require("../../../utils/hooks/useSet");
 var synapseTypes_1 = require("../../../utils/synapseTypes");
 var Typography_1 = tslib_1.__importDefault(require("../../../utils/typography/Typography"));
-var EntityBadgeIcons_1 = require("../../EntityBadgeIcons");
 var DetailsViewTableRenderers_1 = require("../../entity_finder/details/view/DetailsViewTableRenderers");
 var EntityFinderModal_1 = require("../../entity_finder/EntityFinderModal");
 var EntityTree_1 = require("../../entity_finder/tree/EntityTree");
 var IconSvg_1 = tslib_1.__importDefault(require("../../IconSvg"));
+var LoadingScreen_1 = require("../../LoadingScreen");
 var WarningModal_1 = tslib_1.__importDefault(require("../../synapse_form_wrapper/WarningModal"));
 var ToastMessage_1 = require("../../ToastMessage");
 var Checkbox_1 = require("../../widgets/Checkbox");
@@ -37,13 +37,14 @@ function DatasetItemsEditor(props) {
     var _d = (0, react_1.useState)(false), hasChangedSinceLastSave = _d[0], setHasChangedSinceLastSave = _d[1];
     // Disable updating the entity after the initial fetch because we don't want to replace edits that the user makes.
     var _e = (0, react_1.useState)(), datasetToUpdate = _e[0], _setDatasetToUpdate = _e[1];
+    var _f = (0, react_1.useState)(), previousDatasetToUpdate = _f[0], setPreviousDatasetToUpdate = _f[1];
     var setDatasetToUpdate = function (dataset) {
         setHasChangedSinceLastSave(true);
         _setDatasetToUpdate(dataset);
     };
-    var _f = (0, useEntity_1.useGetEntity)(entityId, undefined, {
+    var _g = (0, useEntity_1.useGetEntity)(entityId, undefined, {
         enabled: !datasetToUpdate,
-    }), fetchedDataset = _f.data, refetch = _f.refetch;
+    }), fetchedDataset = _g.data, refetch = _g.refetch;
     (0, react_1.useEffect)(function () {
         // Don't update when we already have datasetToUpdate
         if (!datasetToUpdate && fetchedDataset) {
@@ -55,8 +56,23 @@ function DatasetItemsEditor(props) {
             setHasChangedSinceLastSave(false);
         }
     }, [fetchedDataset, datasetToUpdate]);
-    var _g = (0, useSet_1.useSet)(), selectedIds = _g.set, addSelectedId = _g.add, removeSelectedId = _g.remove, clearSelectedIds = _g.clear;
+    var _h = (0, useSet_1.useSet)(), selectedIds = _h.set, addSelectedId = _h.add, removeSelectedId = _h.remove, clearSelectedIds = _h.clear;
     var allItemsAreSelected = !!(datasetToUpdate && datasetToUpdate.items.length === selectedIds.size);
+    (0, react_1.useEffect)(function () {
+        if (previousDatasetToUpdate &&
+            datasetToUpdate &&
+            !(0, lodash_es_1.isEqual)(previousDatasetToUpdate, datasetToUpdate)) {
+            var toastMessageTitle = getToastMessageTitle();
+            (0, ToastMessage_1.displayToast)(exports.SAVE_THE_DATASET_TO_CONTINUE, 'info', {
+                title: toastMessageTitle,
+                primaryButtonConfig: {
+                    text: 'Save changes to Draft',
+                    onClick: function () { return mutation.mutate(datasetToUpdate); },
+                },
+            });
+        }
+        setPreviousDatasetToUpdate(datasetToUpdate);
+    }, [datasetToUpdate]);
     // We get the project ID to show the "Current Project" context in the Entity Finder.
     var path = (0, useEntity_1.useGetEntityPath)(entityId).data;
     var projectId = (_a = path === null || path === void 0 ? void 0 : path.path[1]) === null || _a === void 0 ? void 0 : _a.id;
@@ -98,41 +114,54 @@ function DatasetItemsEditor(props) {
                     : removeSelectedId(item.entityId);
             } });
     });
-    function addItemsToDataset(itemsToAdd) {
-        setDatasetToUpdate(function (datasetToUpdate) {
-            if (datasetToUpdate) {
-                // Items that were already in the dataset and are not being updated
-                var unchangedItems = datasetToUpdate.items.filter(function (item) {
-                    return !itemsToAdd.find(function (newItem) { return newItem.targetId === item.entityId; });
-                });
-                // Items that were already in the dataset, but were selected so the version may have been updated
-                var updatedItems = itemsToAdd.filter(function (newItem) {
-                    return datasetToUpdate.items.find(function (existingItem) { return existingItem.entityId === newItem.targetId; });
-                });
-                // Items that were not previously in the dataset
-                var newItems = itemsToAdd.filter(function (newItem) {
-                    return !datasetToUpdate.items.find(function (existingItem) { return existingItem.entityId === newItem.targetId; });
-                });
-                // "X item(s) added"
-                var toastMessageTitle = "".concat(newItems.length, " Item").concat(newItems.length === 1 ? '' : 's', " added");
-                // "and Y item(s) updated", only shown if there are updated items
-                if (updatedItems.length > 0) {
-                    toastMessageTitle += " and ".concat(updatedItems.length, " Item").concat(updatedItems.length === 1 ? '' : 's', " updated");
+    function getDataSetDifference(oldDataSet, changedItems) {
+        var unchangedItems = oldDataSet.filter(function (oldItem) {
+            return !changedItems.find(function (newItem) { return newItem.entityId === oldItem.entityId; });
+        });
+        var deletedItems = tslib_1.__spreadArray([], unchangedItems, true);
+        var _a = changedItems.reduce(function (results, result) {
+            var oldItem = oldDataSet.find(function (old) { return old.entityId === result.entityId; });
+            if (oldItem) {
+                if (result.versionNumber !== oldItem.versionNumber) {
+                    results['updatedItems'].push(result);
                 }
                 else {
-                    // if no items were updated, title = "X items(s) added" + " to Dataset"
-                    toastMessageTitle += " to Dataset";
+                    unchangedItems.push(result);
                 }
-                (0, ToastMessage_1.displayToast)(exports.SAVE_THE_DATASET_TO_CONTINUE, 'info', {
-                    title: toastMessageTitle,
-                });
-                var items = tslib_1.__spreadArray(tslib_1.__spreadArray(tslib_1.__spreadArray([], unchangedItems, true), updatedItems.map(function (item) { return ({
-                    entityId: item.targetId,
-                    versionNumber: item.targetVersionNumber,
-                }); }), true), newItems.map(function (item) { return ({
+            }
+            else {
+                results['newItems'].push(result);
+            }
+            return results;
+        }, { updatedItems: [], newItems: [] }), updatedItems = _a.updatedItems, newItems = _a.newItems;
+        return { unchangedItems: unchangedItems, updatedItems: updatedItems, newItems: newItems, deletedItems: deletedItems };
+    }
+    function getToastMessageTitle() {
+        var _a = getDataSetDifference(previousDatasetToUpdate === null || previousDatasetToUpdate === void 0 ? void 0 : previousDatasetToUpdate.items, datasetToUpdate === null || datasetToUpdate === void 0 ? void 0 : datasetToUpdate.items), updatedItems = _a.updatedItems, newItems = _a.newItems, deletedItems = _a.deletedItems;
+        var toastTitle = '';
+        // "X items(s) deleted"
+        if (deletedItems.length > 0) {
+            toastTitle += "".concat(deletedItems.length, " Item").concat(deletedItems.length === 1 ? '' : 's', " removed");
+        }
+        else {
+            // "Y item(s) added"
+            toastTitle += "".concat(newItems.length, " Item").concat(newItems.length === 1 ? '' : 's', " added");
+            // "and Z item(s) updated", only shown if there are updated items
+            if (updatedItems.length > 0) {
+                toastTitle += " and ".concat(updatedItems.length, " Item").concat(updatedItems.length === 1 ? '' : 's', " updated");
+            }
+        }
+        return toastTitle;
+    }
+    function addItemsToDataset(itemsToAdd) {
+        setDatasetToUpdate(function (datasetToUpdate) {
+            if (datasetToUpdate) {
+                var refToDatasetItem = itemsToAdd.map(function (item) { return ({
                     entityId: item.targetId,
                     versionNumber: item.targetVersionNumber,
-                }); }), true);
+                }); });
+                var _a = getDataSetDifference(datasetToUpdate.items, refToDatasetItem), unchangedItems = _a.unchangedItems, updatedItems = _a.updatedItems, newItems = _a.newItems;
+                var items = tslib_1.__spreadArray(tslib_1.__spreadArray(tslib_1.__spreadArray([], unchangedItems, true), updatedItems, true), newItems, true);
                 return tslib_1.__assign(tslib_1.__assign({}, datasetToUpdate), { items: items });
             }
             else {
@@ -144,9 +173,6 @@ function DatasetItemsEditor(props) {
     }
     function removeSelectedItemsFromDataset() {
         setDatasetToUpdate(function (dataset) { return (tslib_1.__assign(tslib_1.__assign({}, dataset), { items: dataset.items.filter(function (datasetItem) { return !selectedIds.has(datasetItem.entityId); }) })); });
-        (0, ToastMessage_1.displayToast)(exports.SAVE_THE_DATASET_TO_CONTINUE, 'info', {
-            title: "".concat(selectedIds.size, " Item").concat(selectedIds.size === 1 ? '' : 's', " removed from the Dataset"),
-        });
         clearSelectedIds();
     }
     function changeVersionOnItem(entityId, newVersion) {
@@ -286,6 +312,7 @@ function DatasetItemsEditor(props) {
                 }
             }, show: showWarningModal, onConfirmCallbackArgs: [], onCancel: function () { return setShowWarningModal(false); } }),
         react_1.default.createElement("div", { className: "DatasetEditorTopBottomPanel" },
+            react_1.default.createElement(LoadingScreen_1.BlockingLoader, { show: mutation.isLoading }),
             react_1.default.createElement("div", { className: "ItemCount" }, datasetToUpdate ? (react_1.default.createElement(Typography_1.default, { variant: "headline3" },
                 datasetToUpdate.items.length === 0
                     ? 'No'
@@ -295,19 +322,17 @@ function DatasetItemsEditor(props) {
                 datasetToUpdate.items.length !== 1 && 's')) : (react_1.default.createElement(lab_1.Skeleton, { variant: "rect", width: 200 }))),
             react_1.default.createElement(react_bootstrap_1.Button, { variant: "sds-primary", disabled: datasetToUpdate == null, onClick: function () { return setShowEntityFinder(true); } }, exports.ADD_FILES),
             react_1.default.createElement(react_bootstrap_1.Button, { disabled: selectedIds.size === 0, variant: "outline", onClick: removeSelectedItemsFromDataset }, exports.REMOVE_FILES)),
-        react_1.default.createElement("div", { className: "DatasetEditorTableContainer" },
-            datasetToUpdate ? (datasetToUpdate.items.length === 0 ? (react_1.default.createElement(NoItemsPlaceholder, null)) : (react_1.default.createElement(react_base_table_1.AutoResizer, { height: TABLE_HEIGHT, onResize: TooltipUtils_1.rebuildTooltip }, function (_a) {
-                var height = _a.height, width = _a.width;
-                return (react_1.default.createElement(react_base_table_1.default, { classPrefix: "DatasetEditorTable", data: tableData, height: height, width: width > totalColumnWidth ? width : totalColumnWidth, rowHeight: ROW_HEIGHT, overscanRowCount: 5, columns: defaultColumns, rowClassName: 'DatasetEditorRow', rowProps: function (_a) {
-                        var rowData = _a.rowData;
-                        return {
-                            'aria-selected': rowData.isSelected,
-                        };
-                    }, headerCellProps: {
-                        role: 'columnheader',
-                    }, onRowsRendered: TooltipUtils_1.rebuildTooltip, onScroll: TooltipUtils_1.rebuildTooltip }));
-            }))) : (react_1.default.createElement(SkeletonTable_1.SkeletonTable, { className: "DatasetItemsEditorSkeleton", numRows: 8, numCols: 6, rowHeight: "".concat(ROW_HEIGHT, "px") })),
-            react_1.default.createElement(react_tooltip_1.default, { id: EntityBadgeIcons_1.ENTITY_BADGE_ICONS_TOOLTIP_ID, className: "EntityBadgeTooltip", delayShow: 100, place: 'right', effect: 'solid' })),
+        react_1.default.createElement("div", { className: "DatasetEditorTableContainer" }, datasetToUpdate ? (datasetToUpdate.items.length === 0 ? (react_1.default.createElement(NoItemsPlaceholder, null)) : (react_1.default.createElement(react_base_table_1.AutoResizer, { height: TABLE_HEIGHT, onResize: TooltipUtils_1.rebuildTooltip }, function (_a) {
+            var height = _a.height, width = _a.width;
+            return (react_1.default.createElement(react_base_table_1.default, { classPrefix: "DatasetEditorTable", data: tableData, height: height, width: width > totalColumnWidth ? width : totalColumnWidth, rowHeight: ROW_HEIGHT, overscanRowCount: 5, columns: defaultColumns, rowClassName: 'DatasetEditorRow', rowProps: function (_a) {
+                    var rowData = _a.rowData;
+                    return {
+                        'aria-selected': rowData.isSelected,
+                    };
+                }, headerCellProps: {
+                    role: 'columnheader',
+                }, onRowsRendered: TooltipUtils_1.rebuildTooltip, onScroll: TooltipUtils_1.rebuildTooltip }));
+        }))) : (react_1.default.createElement(SkeletonTable_1.SkeletonTable, { className: "DatasetItemsEditorSkeleton", numRows: 8, numCols: 6, rowHeight: "".concat(ROW_HEIGHT, "px") }))),
         react_1.default.createElement("div", { className: "DatasetEditorTopBottomPanel" },
             react_1.default.createElement(react_bootstrap_1.Button, { variant: 'outline', onClick: function () {
                     if (hasChangedSinceLastSave) {

package/dist/containers/table/datasets/DatasetItemsEditor.js.map CHANGED Viewed

	@@ -1 +1 @@
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