synapse-react-client 3.0.12 → 3.0.14

package/dist/umd.index.d.ts

@@ -73,5 +73,6 @@ declare const SynapseComponents: {
     QueryWrapperPlotNav: import("react").FunctionComponent<import("./containers/query_wrapper_plot_nav/QueryWrapperPlotNav").QueryWrapperPlotNavProps>;
     StandaloneQueryWrapper: import("react").FunctionComponent<import("./containers/table/StandaloneQueryWrapper").StandaloneQueryWrapperProps>;
     ChangePassword: import("react").FunctionComponent<{}>;
+    ForumSearch: (props: import("./containers/ForumSearch").ForumSearchProps) => JSX.Element;
 };
 export { SynapseComponents, SynapseConstants, SynapseClient, SynapseContext };

package/dist/umd.index.js

@@ -44,6 +44,7 @@ var ProgrammaticInstructionsModal_1 = require("./containers/ProgrammaticInstruct
 var PlotlyWrapper_1 = (0, tslib_1.__importDefault)(require("./containers/PlotlyWrapper"));
 var IconSvg_1 = (0, tslib_1.__importDefault)(require("./containers/IconSvg"));
 var ChangePassword_1 = (0, tslib_1.__importDefault)(require("./containers/ChangePassword"));
+var ForumSearch_1 = (0, tslib_1.__importDefault)(require("./containers/ForumSearch"));
 var SynapseContext_1 = require("./utils/SynapseContext");
 var DatasetItemsEditor_1 = require("./containers/table/datasets/DatasetItemsEditor");
 var EntityIcon_1 = require("./containers/EntityIcon");
@@ -96,6 +97,7 @@ var SynapseComponents = {
     QueryWrapperPlotNav: QueryWrapperPlotNav_1.default,
     StandaloneQueryWrapper: StandaloneQueryWrapper_1.default,
     ChangePassword: ChangePassword_1.default,
+    ForumSearch: ForumSearch_1.default,
 };
 exports.SynapseComponents = SynapseComponents;
 //# sourceMappingURL=umd.index.js.map

package/dist/umd.index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"umd.index.js","sourceRoot":"","sources":["../src/lib/umd.index.ts"],"names":[],"mappings":";;;;AAAA,uCAAoC;AACpC,gFAA4C;AAC5C,0EAAsC;AACtC,kFAA8C;AAC9C,4FAAwD;AACxD,oFAAgD;AAChD,kFAA8C;AAC9C,gHAA4E;AAC5E,6BAA0B;AAC1B,iCAAyD;AA4F7B,iGA5FnB,wBAAgB,OA4FmB;AAAE,8FA5FnB,qBAAa,OA4FmB;AA3F3D,gFAA8E;AAC9E,sFAAoF;AACpF,oEAAkE;AAClE,oGAAgE;AAChE,wFAAoD;AACpD,sIAAkG;AAClG,gEAA8D;AAC9D,kEAAgE;AAChE,mFAAiF;AACjF,0FAAsD;AACtD,4FAA0F;AAC1F,wEAAsE;AACtE,6HAAyF;AACzF,kHAA8E;AAC9E,kFAA8C;AAC9C,kEAAgE;AAChE,6GAAyE;AACzE,4FAAwD;AACxD,wDAAsD;AACtD,qIAAiG;AACjG,wFAAsF;AACtF,mHAA+E;AAC/E,6GAA2G;AAC3G,wEAAsE;AACtE,kIAA8F;AAC9F,0DAA+E;AAC/E,4FAA0F;AAC1F,0FAAsD;AACtD,8EAA0C;AAC1C,4FAAwD;AACxD,sFAAkD;AAClD,yDAI+B;AAC/B,qFAAmF;AACnF,sDAAwD;AACxD,oEAAkE;AAElE,IAAM,cAAc,GAAG;IACrB,sBAAsB,yCAAA;IACtB,sBAAsB,yCAAA;IACtB,iBAAiB,oCAAA;CAClB,CAAA;AA+C4D,wCAAc;AA7C3E,IAAM,iBAAiB,GAAG;IACxB,KAAK,iBAAA;IACL,SAAS,qBAAA;IACT,UAAU,sBAAA;IACV,QAAQ,oBAAA;IACR,cAAc,0BAAA;IACd,SAAS,qBAAA;IACT,iBAAiB,6BAAA;IACjB,cAAc,iCAAA;IACd,oBAAoB,6CAAA;IACpB,eAAe,mCAAA;IACf,iBAAiB,uCAAA;IACjB,kBAAkB,8BAAA;IAClB,YAAY,wBAAA;IACZ,mBAAmB,+BAAA;IACnB,eAAe,mCAAA;IACf,YAAY,6BAAA;IACZ,SAAS,qBAAA;IACT,gBAAgB,qCAAA;IAChB,gBAAgB,qCAAA;IAChB,cAAc,0BAAA;IACd,oBAAoB,6CAAA;IACpB,cAAc,EAAE,wBAAc;IAC9B,4BAA4B,6DAAA;IAC5B,gBAAgB,qCAAA;IAChB,aAAa,yBAAA;IACb,WAAW,2BAAA;IACX,qBAAqB,sCAAA;IACrB,YAAY,6BAAA;IACZ,OAAO,mBAAA;IACP,gBAAgB,4BAAA;IAChB,aAAa,yBAAA;IACb,kBAAkB,yCAAA;IAClB,cAAc,6BAAA;IACd,WAAW,2BAAA;IACX,yBAAyB,qCAAA;IACzB,0BAA0B,sCAAA;IAC1B,6BAA6B,+DAAA;IAC7B,cAAc,iCAAA;IACd,mBAAmB,+BAAA;IACnB,sBAAsB,kCAAA;IACtB,cAAc,0BAAA;IACd,WAAW,uBAAA;CACZ,CAAA;AAEQ,8CAAiB"}

package/dist/utils/APIConstants.d.ts

@@ -41,4 +41,5 @@ export declare const REGISTER_ACCOUNT_STEP_2: string;
 export declare const SIGN_TERMS_OF_USE: string;
 export declare const VERIFICATION_SUBMISSION: string;
 export declare const ACCESS_REQUIREMENT_BY_ID: (id: string | number) => string;
+export declare const ACCESS_REQUIREMENT_ACL: (id: string | number) => string;
 export declare const FAVORITES: string;

package/dist/utils/APIConstants.js

@@ -3,7 +3,7 @@
  * Separating API endpoints into their own constants file
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.FAVORITES = exports.ACCESS_REQUIREMENT_BY_ID = exports.VERIFICATION_SUBMISSION = exports.SIGN_TERMS_OF_USE = exports.REGISTER_ACCOUNT_STEP_2 = exports.REGISTER_ACCOUNT_STEP_1 = exports.ALIAS_AVAILABLE = exports.NOTIFICATION_EMAIL = exports.USER_PROFILE_ID = exports.USER_PROFILE = exports.USER_ID_BUNDLE = exports.USER_ID = exports.USER_BUNDLE = exports.USER = exports.SCHEMA_VALIDATION_GET = exports.SCHEMA_VALIDATION_START = exports.REGISTERED_SCHEMA_ID = exports.REGISTERED_SCHEMA = exports.SCHEMA = exports.USER_PROFILE_ENDPOINT = exports.ASYNCHRONOUS_JOB_TOKEN = exports.TABLE_QUERY_ASYNC_GET = exports.TABLE_QUERY_ASYNC_START = exports.ENTITY_SCHEMA_VALIDATION = exports.ENTITY_SCHEMA_BINDING = exports.ENTITY_SCHEMA = exports.ENTITY_JSON = exports.ENTITY_HEADERS = exports.ENTITY_ACCESS = exports.ENTITY_BUNDLE_V2 = exports.ENTITY_ID_VERSIONS = exports.ENTITY_ID_VERSION = exports.ENTITY_ID = exports.ENTITY = exports.FILE = exports.AUTH = exports.REPO = exports.BACKEND_ENDPOINT = void 0;
+exports.FAVORITES = exports.ACCESS_REQUIREMENT_ACL = exports.ACCESS_REQUIREMENT_BY_ID = exports.VERIFICATION_SUBMISSION = exports.SIGN_TERMS_OF_USE = exports.REGISTER_ACCOUNT_STEP_2 = exports.REGISTER_ACCOUNT_STEP_1 = exports.ALIAS_AVAILABLE = exports.NOTIFICATION_EMAIL = exports.USER_PROFILE_ID = exports.USER_PROFILE = exports.USER_ID_BUNDLE = exports.USER_ID = exports.USER_BUNDLE = exports.USER = exports.SCHEMA_VALIDATION_GET = exports.SCHEMA_VALIDATION_START = exports.REGISTERED_SCHEMA_ID = exports.REGISTERED_SCHEMA = exports.SCHEMA = exports.USER_PROFILE_ENDPOINT = exports.ASYNCHRONOUS_JOB_TOKEN = exports.TABLE_QUERY_ASYNC_GET = exports.TABLE_QUERY_ASYNC_START = exports.ENTITY_SCHEMA_VALIDATION = exports.ENTITY_SCHEMA_BINDING = exports.ENTITY_SCHEMA = exports.ENTITY_JSON = exports.ENTITY_HEADERS = exports.ENTITY_ACCESS = exports.ENTITY_BUNDLE_V2 = exports.ENTITY_ID_VERSIONS = exports.ENTITY_ID_VERSION = exports.ENTITY_ID = exports.ENTITY = exports.FILE = exports.AUTH = exports.REPO = exports.BACKEND_ENDPOINT = void 0;
 var getEndpoint_1 = require("./functions/getEndpoint");
 exports.BACKEND_ENDPOINT = "" + (0, getEndpoint_1.getEndpoint)(getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 exports.REPO = "/repo/v1";
@@ -88,5 +88,9 @@ var ACCESS_REQUIREMENT_BY_ID = function (id) {
     return exports.REPO + "/accessRequirement/" + id;
 };
 exports.ACCESS_REQUIREMENT_BY_ID = ACCESS_REQUIREMENT_BY_ID;
+var ACCESS_REQUIREMENT_ACL = function (id) {
+    return (0, exports.ACCESS_REQUIREMENT_BY_ID)(id) + '/acl';
+};
+exports.ACCESS_REQUIREMENT_ACL = ACCESS_REQUIREMENT_ACL;
 exports.FAVORITES = exports.REPO + "/favorite";
 //# sourceMappingURL=APIConstants.js.map

package/dist/utils/APIConstants.js.map

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package/dist/utils/SynapseClient.d.ts

@@ -1,9 +1,9 @@
 import { JSONSchema7 } from 'json-schema';
 import { BackendDestinationEnum } from './functions/getEndpoint';
 import { AccessApproval, AccessCodeResponse, AccessControlList, AccessRequirement, AccessRequirementStatus, ACTSubmissionStatus, AsynchronousJobStatus, BatchFileRequest, BatchFileResult, BulkFileDownloadRequest, BulkFileDownloadResponse, DownloadFromTableRequest, DownloadFromTableResult, DownloadList, DownloadOrder, Entity, EntityBundle, EntityBundleRequest, EntityHeader, EntityId, EntityJson, EntityLookupRequest, EntityPath, Evaluation, EvaluationRound, FileEntity, FileHandle, FileHandleAssociateType, FileHandleAssociation, FileHandleResults, FileResult, FileUploadComplete, FormData, FormGroup, ListRequest, ListResponse, LoginResponse, MultipartUploadRequest, MultipartUploadStatus, NotificationEmail, OAuthClientPublic, OAuthConsentGrantedResponse, ObjectType, OIDCAuthorizationRequest, OIDCAuthorizationRequestDescription, PaginatedResults, ProjectFilesStatisticsRequest, ProjectFilesStatisticsResponse, ProjectHeaderList, QueryBundleRequest, QueryResultBundle, QueryTableResults, ReferenceList, RestrictionInformationRequest, RestrictionInformationResponse, Submission, SynapseVersion, UserBundle, UserGroupHeaderResponsePage, UserProfile, VerificationSubmission, WikiPage, WikiPageKey } from './synapseTypes/';
-import { TYPE_FILTER } from './synapseTypes/UserGroupHeader';
 import { ACCESS_TYPE, CreateSubmissionRequest, ManagedACTAccessRequirementStatus, RequestInterface } from './synapseTypes/AccessRequirement';
 import { RenewalInterface } from './synapseTypes/AccessRequirement/RenewalInterface';
+import { SubmissionStateChangeRequest } from './synapseTypes/AccessRequirement/SubmissionStateChangeRequest';
 import { AccessTokenGenerationRequest } from './synapseTypes/AccessToken/AccessTokenGenerationRequest';
 import { AccessTokenGenerationResponse } from './synapseTypes/AccessToken/AccessTokenGenerationResponse';
 import { AccessTokenRecordList } from './synapseTypes/AccessToken/AccessTokenRecord';
@@ -32,7 +32,11 @@ import { SearchQuery, SearchResults } from './synapseTypes/Search';
 import { TableUpdateTransactionRequest } from './synapseTypes/Table/TableUpdate';
 import { SqlTransformResponse, TransformSqlWithFacetsRequest } from './synapseTypes/Table/TransformSqlWithFacetsRequest';
 import { Team } from './synapseTypes/Team';
+import { TYPE_FILTER } from './synapseTypes/UserGroupHeader';
 import { VersionInfo } from './synapseTypes/VersionInfo';
+import { DiscussionReplyBundle, DiscussionThreadBundle } from './synapseTypes/DiscussionBundle';
+import { MessageURL } from './synapseTypes/MessageUrl';
+import { DiscussionSearchRequest, DiscussionSearchResponse } from './synapseTypes/DiscussionSearch';
 export declare const IS_OUTSIDE_SYNAPSE_ORG: boolean;
 export declare const ACCESS_TOKEN_COOKIE_KEY = "org.sagebionetworks.security.user.login.token";
 export declare const SYNAPSE_STORAGE_LOCATION_ID = 1;
@@ -60,6 +64,12 @@ export declare class SynapseClientError extends Error {
     reason: string;
     constructor(status: number, reason: string);
 }
+/**
+ * Invokes a function that makes a request to Synapse and returns null if the server responds with a 404.
+ * @param fn a function that may throw a SynapseClientError when encountering an HTTP Error Code
+ * @returns The result of the function call, or null if the result is a 404 "Not Found" error.
+ */
+export declare function allowNotFoundError<T>(fn: () => Promise<T>): Promise<T | null>;
 export declare const doPost: <T>(url: string, requestJsonObject: unknown, accessToken: string | undefined, initCredentials: RequestInit['credentials'], endpoint: BackendDestinationEnum, signal?: AbortSignal | undefined) => Promise<T>;
 export declare const doGet: <T>(url: string, accessToken: string | undefined, initCredentials: RequestInit['credentials'], endpoint: BackendDestinationEnum) => Promise<T>;
 export declare const doDelete: (url: string, accessToken: string | undefined, initCredentials: RequestInit['credentials'], endpoint: BackendDestinationEnum) => Promise<void>;
@@ -552,7 +562,14 @@ export declare const getAccessRequirement: (accessToken: string | undefined, id:
  * @param {number} id id of the access requirement
  * @returns {Promise<AccessRequirement>}
  */
-export declare const getAccessRequirementById: (accessToken: string | undefined, id: number) => Promise<AccessRequirement>;
+export declare const getAccessRequirementById: <T extends AccessRequirement>(accessToken: string | undefined, id: string | number) => Promise<T>;
+/**
+ * Fetch the ACL for the access requirement with the given id.
+ *
+ * See https://rest-docs.synapse.org/rest/GET/accessRequirement/requirementId/acl.html
+ * @returns the ACL for the specified AR, or null if the ACL does not exist
+ */
+export declare const getAccessRequirementAcl: (accessToken: string | undefined, id: string | number) => Promise<AccessControlList | null>;
 /**
  * Retrieve an access requirement status for a given access requirement ID.
  *
@@ -646,6 +663,16 @@ export declare const getDataAccessRequestForUpdate: (requirementId: string, acce
 export declare const updateDataAccessRequest: (requestObj: RequestInterface, accessToken: string) => Promise<RequestInterface>;
 export declare const submitDataAccessRequest: (requestObj: CreateSubmissionRequest, accessToken: string) => Promise<ACTSubmissionStatus>;
 export declare const cancelDataAccessRequest: (submissionId: string, accessToken: string) => Promise<ACTSubmissionStatus>;
+/**
+ * Request to update a submission' state. Only ACT members and delegates with the REVIEW_SUBMISSION ACL
+ * permission can perform this action.
+ *
+ * See https://docs.synapse.org/rest/PUT/dataAccessSubmission/submissionId.html
+ * @param request
+ * @param accessToken
+ * @returns
+ */
+export declare const updateSubmissionStatus: (request: SubmissionStateChangeRequest, accessToken?: string | undefined) => Promise<void>;
 /**
  * Get the schema bound to an entity.
  * https://docs.synapse.org/rest/GET/entity/id/schema/binding.html
@@ -768,3 +795,46 @@ export declare const deleteEmail: (accessToken: string | undefined, email?: stri
  * @param accessToken
  */
 export declare const updateNotificationEmail: (email: string, accessToken: string | undefined) => Promise<unknown>;
+/**
+ * This API is used to get a reply and its statistic given its ID.
+Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/reply/replyId.html
+ * @param replyId
+ * @param accessToken
+ */
+export declare const getReply: (replyId: string, accessToken: string | undefined) => Promise<DiscussionReplyBundle>;
+/**
+ * This API is used to get the message URL of a reply. The message
+ * URL is the URL to download the file which contains the reply message.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/reply/messageUrl.html
+ * @param messageKey
+ * @param accessToken
+ */
+export declare const getReplyMessageUrl: (messageKey: string, accessToken: string | undefined) => Promise<MessageURL>;
+/**
+ * This API is used to get a thread and its statistic given its ID.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/thread/threadId.html
+ * @param threadId
+ * @param accessToken
+ */
+export declare const getThread: (threadId: string, accessToken: string | undefined) => Promise<DiscussionThreadBundle>;
+/**
+ * This API is used to get the message URL of a reply. The message
+ * URL is the URL to download the file which contains the reply message.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/thread/messageUrl.html
+ * @param messageKey
+ * @param accessToken
+ */
+export declare const getThreadMessageUrl: (messageKey: string, accessToken: string | undefined) => Promise<MessageURL>;
+/**
+ * Performs a full text search in the forum defined by the given id.
+ * Target users: anyone who has READ permission on the project of the forum.
+ * http://rest-docs.synapse.org/rest/POST/forum/forumId/search.html
+ * @param discussionSearchRequest
+ * @param forumId
+ * @param accessToken
+ */
+export declare const forumSearch: (discussionSearchRequest: DiscussionSearchRequest, forumId: string, accessToken: string | undefined) => Promise<DiscussionSearchResponse>;

package/dist/utils/SynapseClient.js

@@ -1,9 +1,9 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getTeamList = exports.getUserTeamList = exports.getUserChallenges = exports.removeUserFavorite = exports.getUserFavorites = exports.getEntityWiki = exports.getEntityBundleV2 = exports.deleteEntity = exports.updateEntity = exports.getEntityHeader = exports.getEntityHeaders = exports.getEntityHeadersByIds = exports.getEntity = exports.getBulkFiles = exports.getFiles = exports.lookupChildEntity = exports.getEntityChildren = exports.getUserProfiles = exports.getGroupHeadersBatch = exports.getUserGroupHeaders = exports.updateMyUserProfile = exports.getMyUserBundle = exports.getUserBundle = exports.getUserProfileById = exports.getUserProfile = exports.createProject = exports.createEntity = exports.oAuthSessionRequest = exports.oAuthUrlRequest = exports.login = exports.getFullQueryTableResults = exports.getQueryTableResults = exports.getQueryTableAsyncJobResults = exports.getAsyncResultBodyFromJobId = exports.getAsyncResultFromJobId = exports.getFileHandleByIdURL = exports.getActualFileHandleByIdURL = exports.getFileHandleById = exports.getDownloadFromTableRequest = exports.getVersion = exports.doPut = exports.doDelete = exports.doGet = exports.doPost = exports.SynapseClientError = exports.delay = exports.getRootURL = exports.SYNAPSE_STORAGE_LOCATION_ID = exports.ACCESS_TOKEN_COOKIE_KEY = exports.IS_OUTSIDE_SYNAPSE_ORG = void 0;
-exports.acceptFormData = exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = void 0;
-exports.signSynapseTermsOfUse = exports.unbindOAuthProviderToAccount = exports.bindOAuthProviderToAccount = exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.getAccessRequirementById = exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = void 0;
-exports.updateNotificationEmail = exports.deleteEmail = exports.addEmailAddressStep2 = exports.addEmailAddressStep1 = exports.resetPassword = exports.changePasswordWithToken = exports.changePasswordWithCurrentPassword = exports.createProfileVerificationSubmission = void 0;
+exports.getUserTeamList = exports.getUserChallenges = exports.removeUserFavorite = exports.getUserFavorites = exports.getEntityWiki = exports.getEntityBundleV2 = exports.deleteEntity = exports.updateEntity = exports.getEntityHeader = exports.getEntityHeaders = exports.getEntityHeadersByIds = exports.getEntity = exports.getBulkFiles = exports.getFiles = exports.lookupChildEntity = exports.getEntityChildren = exports.getUserProfiles = exports.getGroupHeadersBatch = exports.getUserGroupHeaders = exports.updateMyUserProfile = exports.getMyUserBundle = exports.getUserBundle = exports.getUserProfileById = exports.getUserProfile = exports.createProject = exports.createEntity = exports.oAuthSessionRequest = exports.oAuthUrlRequest = exports.login = exports.getFullQueryTableResults = exports.getQueryTableResults = exports.getQueryTableAsyncJobResults = exports.getAsyncResultBodyFromJobId = exports.getAsyncResultFromJobId = exports.getFileHandleByIdURL = exports.getActualFileHandleByIdURL = exports.getFileHandleById = exports.getDownloadFromTableRequest = exports.getVersion = exports.doPut = exports.doDelete = exports.doGet = exports.doPost = exports.allowNotFoundError = exports.SynapseClientError = exports.delay = exports.getRootURL = exports.SYNAPSE_STORAGE_LOCATION_ID = exports.ACCESS_TOKEN_COOKIE_KEY = exports.IS_OUTSIDE_SYNAPSE_ORG = void 0;
+exports.listFormDataAsFormAdmin = exports.listFormData = exports.submitFormData = exports.deleteFormData = exports.updateFormData = exports.createFormData = exports.updateFormACL = exports.getFormACL = exports.createFormGroup = exports.consentToOAuth2Request = exports.getAuthenticatedOn = exports.getOAuth2Client = exports.hasUserAuthorizedOAuthClient = exports.getOAuth2RequestDescription = exports.getEvaluationSubmissions = exports.deleteEvaluationRound = exports.updateEvaluationRound = exports.createEvaluationRound = exports.getEvaluationRoundsList = exports.getEvaluationRound = exports.deleteEvaluation = exports.createEvaluation = exports.updateEvaluation = exports.getEvaluation = exports.getEvaluationPermissions = exports.submitToEvaluation = exports.createACL = exports.addFilesToDownloadListV2 = exports.createManifestFromDownloadListV2 = exports.createPackageFromDownloadListV2 = exports.addFileToDownloadListV2 = exports.getFileResult = exports.getFileHandleContent = exports.getFileHandleContentFromID = exports.startMultipartUpload = exports.checkUploadComplete = exports.uploadFile = exports.signOut = exports.detectSSOCode = exports.getPrincipalAliasRequest = exports.getUseUtcTimeFromCookie = exports.getAccessTokenFromCookie = exports.setAccessTokenCookie = exports.isInSynapseExperimentalMode = exports.getPresignedUrlForWikiAttachment = exports.getWikiAttachmentsFromEvaluation = exports.getWikiAttachmentsFromEntity = exports.getWikiPageKeyForAccessRequirement = exports.getWikiPageKeyForEntity = exports.getTeamList = void 0;
+exports.oAuthRegisterAccountStep2 = exports.registerAccountStep2 = exports.registerAccountStep1 = exports.isAliasAvailable = exports.getNotificationEmail = exports.updateEntityJson = exports.getEntityJson = exports.hasAccessToEntity = exports.getValidationSchema = exports.getSchema = exports.getSchemaValidationResults = exports.getSchemaBinding = exports.updateSubmissionStatus = exports.cancelDataAccessRequest = exports.submitDataAccessRequest = exports.updateDataAccessRequest = exports.getDataAccessRequestForUpdate = exports.getResearchProject = exports.updateResearchProject = exports.removeItemFromDownloadListV2 = exports.getDownloadListActionsRequired = exports.getDownloadListStatistics = exports.getAvailableFilesToDownload = exports.clearDownloadListV2 = exports.searchEntities = exports.getEntityVersions = exports.getEntityPath = exports.getUserProjects = exports.getMyProjects = exports.deletePersonalAccessToken = exports.getPersonalAccessTokenRecords = exports.createPersonalAccessToken = exports.getTransformSqlWithFacetsRequest = exports.updateTable = exports.deleteDownloadList = exports.deleteDownloadListFiles = exports.getAllOfPaginatedService = exports.getDownloadOrder = exports.getDownloadList = exports.postAccessApproval = exports.getAccessApproval = exports.getAllAccessRequirements = exports.getAccessRequirementStatus = exports.getAccessRequirementAcl = exports.getAccessRequirementById = exports.getAccessRequirement = exports.getRestrictionInformation = exports.getProjectStatistics = exports.rejectFormData = exports.acceptFormData = void 0;
+exports.forumSearch = exports.getThreadMessageUrl = exports.getThread = exports.getReplyMessageUrl = exports.getReply = exports.updateNotificationEmail = exports.deleteEmail = exports.addEmailAddressStep2 = exports.addEmailAddressStep1 = exports.resetPassword = exports.changePasswordWithToken = exports.changePasswordWithCurrentPassword = exports.createProfileVerificationSubmission = exports.signSynapseTermsOfUse = exports.unbindOAuthProviderToAccount = exports.bindOAuthProviderToAccount = void 0;
 var tslib_1 = require("tslib");
 var spark_md5_1 = (0, tslib_1.__importDefault)(require("spark-md5"));
 var universal_cookie_1 = (0, tslib_1.__importDefault)(require("universal-cookie"));
@@ -61,6 +61,40 @@ var SynapseClientError = /** @class */ (function (_super) {
     return SynapseClientError;
 }(Error));
 exports.SynapseClientError = SynapseClientError;
+/**
+ * Invokes a function that makes a request to Synapse and returns null if the server responds with a 404.
+ * @param fn a function that may throw a SynapseClientError when encountering an HTTP Error Code
+ * @returns The result of the function call, or null if the result is a 404 "Not Found" error.
+ */
+function allowNotFoundError(fn) {
+    return (0, tslib_1.__awaiter)(this, void 0, void 0, function () {
+        var response, e_1;
+        return (0, tslib_1.__generator)(this, function (_a) {
+            switch (_a.label) {
+                case 0:
+                    response = null;
+                    _a.label = 1;
+                case 1:
+                    _a.trys.push([1, 3, , 4]);
+                    return [4 /*yield*/, fn()];
+                case 2:
+                    response = _a.sent();
+                    return [3 /*break*/, 4];
+                case 3:
+                    e_1 = _a.sent();
+                    if (e_1 instanceof SynapseClientError && e_1.status === 404) {
+                        // Permitted
+                    }
+                    else {
+                        throw e_1;
+                    }
+                    return [3 /*break*/, 4];
+                case 4: return [2 /*return*/, response];
+            }
+        });
+    });
+}
+exports.allowNotFoundError = allowNotFoundError;
 /*
   0 - no internet connection
   429 - Too Many Requests
@@ -1561,6 +1595,19 @@ var getAccessRequirementById = function (accessToken, id) {
     return (0, exports.doGet)((0, APIConstants_1.ACCESS_REQUIREMENT_BY_ID)(id), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.getAccessRequirementById = getAccessRequirementById;
+/**
+ * Fetch the ACL for the access requirement with the given id.
+ *
+ * See https://rest-docs.synapse.org/rest/GET/accessRequirement/requirementId/acl.html
+ * @returns the ACL for the specified AR, or null if the ACL does not exist
+ */
+var getAccessRequirementAcl = function (accessToken, id) {
+    // It's possible for an AR to not have an ACL, so pre-emptively handle 404
+    return allowNotFoundError(function () {
+        return (0, exports.doGet)((0, APIConstants_1.ACCESS_REQUIREMENT_ACL)(id), accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+    });
+};
+exports.getAccessRequirementAcl = getAccessRequirementAcl;
 /**
  * Retrieve an access requirement status for a given access requirement ID.
  *
@@ -1636,7 +1683,7 @@ exports.getDownloadOrder = getDownloadOrder;
  * @returns
  */
 var getAllOfPaginatedService = function (fn) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
-    var limit, offset, existsMoreData, results, data, e_1;
+    var limit, offset, existsMoreData, results, data, e_2;
     return (0, tslib_1.__generator)(this, function (_a) {
         switch (_a.label) {
             case 0:
@@ -1660,8 +1707,8 @@ var getAllOfPaginatedService = function (fn) { return (0, tslib_1.__awaiter)(voi
                 }
                 return [3 /*break*/, 5];
             case 4:
-                e_1 = _a.sent();
-                throw Error("Error on getting paginated results " + e_1);
+                e_2 = _a.sent();
+                throw Error("Error on getting paginated results " + e_2);
             case 5: return [3 /*break*/, 1];
             case 6: return [2 /*return*/, results];
         }
@@ -1853,6 +1900,19 @@ var cancelDataAccessRequest = function (submissionId, accessToken) {
     return (0, exports.doPut)("/repo/v1/dataAccessSubmission/" + submissionId + "/cancellation", undefined, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.cancelDataAccessRequest = cancelDataAccessRequest;
+/**
+ * Request to update a submission' state. Only ACT members and delegates with the REVIEW_SUBMISSION ACL
+ * permission can perform this action.
+ *
+ * See https://docs.synapse.org/rest/PUT/dataAccessSubmission/submissionId.html
+ * @param request
+ * @param accessToken
+ * @returns
+ */
+var updateSubmissionStatus = function (request, accessToken) {
+    return (0, exports.doPut)("/repo/v1/dataAccessSubmission/" + request.submissionId, request, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.updateSubmissionStatus = updateSubmissionStatus;
 /**
  * Get the schema bound to an entity.
  * https://docs.synapse.org/rest/GET/entity/id/schema/binding.html
@@ -2079,4 +2139,62 @@ var updateNotificationEmail = function (email, accessToken) {
     return (0, exports.doPut)('/repo/v1/notificationEmail', { email: email }, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
 };
 exports.updateNotificationEmail = updateNotificationEmail;
+/**
+ * This API is used to get a reply and its statistic given its ID.
+Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/reply/replyId.html
+ * @param replyId
+ * @param accessToken
+ */
+var getReply = function (replyId, accessToken) {
+    return (0, exports.doGet)("/repo/v1/reply/" + replyId, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getReply = getReply;
+/**
+ * This API is used to get the message URL of a reply. The message
+ * URL is the URL to download the file which contains the reply message.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/reply/messageUrl.html
+ * @param messageKey
+ * @param accessToken
+ */
+var getReplyMessageUrl = function (messageKey, accessToken) {
+    return (0, exports.doGet)("/repo/v1/reply/messageUrl?messageKey=" + messageKey, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getReplyMessageUrl = getReplyMessageUrl;
+/**
+ * This API is used to get a thread and its statistic given its ID.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/thread/threadId.html
+ * @param threadId
+ * @param accessToken
+ */
+var getThread = function (threadId, accessToken) {
+    return (0, exports.doGet)("/repo/v1/thread/" + threadId, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getThread = getThread;
+/**
+ * This API is used to get the message URL of a reply. The message
+ * URL is the URL to download the file which contains the reply message.
+ * Target users: anyone who has READ permission to the project.
+ * http://rest-docs.synapse.org/rest/GET/thread/messageUrl.html
+ * @param messageKey
+ * @param accessToken
+ */
+var getThreadMessageUrl = function (messageKey, accessToken) {
+    return (0, exports.doGet)("/repo/v1/thread/messageUrl?messageKey=" + messageKey, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.getThreadMessageUrl = getThreadMessageUrl;
+/**
+ * Performs a full text search in the forum defined by the given id.
+ * Target users: anyone who has READ permission on the project of the forum.
+ * http://rest-docs.synapse.org/rest/POST/forum/forumId/search.html
+ * @param discussionSearchRequest
+ * @param forumId
+ * @param accessToken
+ */
+var forumSearch = function (discussionSearchRequest, forumId, accessToken) {
+    return (0, exports.doPost)("/repo/v1/forum/" + forumId + "/search", discussionSearchRequest, accessToken, undefined, getEndpoint_1.BackendDestinationEnum.REPO_ENDPOINT);
+};
+exports.forumSearch = forumSearch;
 //# sourceMappingURL=SynapseClient.js.map