symbiote-cli 0.2.1 → 0.2.3

package/dist/src/mcp/tools/graph-tools.js

@@ -1,15 +1,15 @@
 import { executePgqQuery } from '#cortex/pgq-queries.js';
-import { wrapResponse, getMaxDepth } from '../tool-response.js';
+import { wrapResponse, getMinDepthLevel } from '../tool-response.js';
 export function isLegacyQueryFormat(input) {
     return 'type' in input && typeof input.type === 'string';
 }
 export async function handleQueryGraphV2(ctx, input) {
     const rows = await executePgqQuery(ctx.db, input.query);
-    const depth = await getMaxDepth(ctx.cortexRepo);
+    const depth = await getMinDepthLevel(ctx.cortexRepo);
     return wrapResponse(rows, depth, false);
 }
 export async function handleGetContextForSymbol(ctx, input) {
-    const depth = await getMaxDepth(ctx.cortexRepo);
+    const depth = await getMinDepthLevel(ctx.cortexRepo);
     const matches = await ctx.cortexRepo.getSymbolByName(input.symbol);
     if (matches.length === 0) {
         const byId = await ctx.cortexRepo.getSymbolById(input.symbol);

package/dist/src/mcp/tools/graph-tools.js.map

@@ -1 +1 @@
-{"version":3,"file":"graph-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/graph-tools.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AA+BhE,MAAM,UAAU,mBAAmB,CAAC,KAA8B;IAC9D,OAAO,MAAM,IAAI,KAAK,IAAI,OAAO,KAAK,CAAC,IAAI,KAAK,QAAQ,CAAC;AAC7D,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACpC,GAAqB,EACrB,KAAwB;IAExB,MAAM,IAAI,GAAG,MAAM,eAAe,CAAC,GAAG,CAAC,EAAE,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC;IACxD,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAChD,OAAO,YAAY,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC5C,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,yBAAyB,CAC3C,GAAqB,EACrB,KAA+B;IAE/B,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAChD,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;IAEnE,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACvB,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QAC9D,IAAI,CAAC,IAAI,EAAE,CAAC;YACR,OAAO,YAAY,CAAC,EAAE,KAAK,EAAE,WAAW,KAAK,CAAC,MAAM,aAAa,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;QACvF,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACvB,CAAC;IAED,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;IAC1B,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,sBAAsB,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IACpE,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,YAAY,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IAE7D,MAAM,MAAM,GAAkB;QAC1B,MAAM;QACN,OAAO,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9B,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SAC3B,CAAC,CAAC;QACH,OAAO,EAAE,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YACzB,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SAC3B,CAAC,CAAC;QACH,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YAClC,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;SACf,CAAC,CAAC;QACH,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;QAChE,YAAY,EAAE,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;KACzE,CAAC;IAEF,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}
+{"version":3,"file":"graph-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/graph-tools.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AA+BrE,MAAM,UAAU,mBAAmB,CAAC,KAA8B;IAC9D,OAAO,MAAM,IAAI,KAAK,IAAI,OAAO,KAAK,CAAC,IAAI,KAAK,QAAQ,CAAC;AAC7D,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACpC,GAAqB,EACrB,KAAwB;IAExB,MAAM,IAAI,GAAG,MAAM,eAAe,CAAC,GAAG,CAAC,EAAE,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC;IACxD,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IACrD,OAAO,YAAY,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC5C,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,yBAAyB,CAC3C,GAAqB,EACrB,KAA+B;IAE/B,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IACrD,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;IAEnE,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACvB,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QAC9D,IAAI,CAAC,IAAI,EAAE,CAAC;YACR,OAAO,YAAY,CAAC,EAAE,KAAK,EAAE,WAAW,KAAK,CAAC,MAAM,aAAa,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;QACvF,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACvB,CAAC;IAED,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;IAC1B,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,sBAAsB,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IACpE,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,YAAY,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IAE7D,MAAM,MAAM,GAAkB;QAC1B,MAAM;QACN,OAAO,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9B,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SAC3B,CAAC,CAAC;QACH,OAAO,EAAE,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YACzB,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;YACZ,UAAU,EAAE,CAAC,CAAC,UAAU;SAC3B,CAAC,CAAC;QACH,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;YAClC,QAAQ,EAAE,CAAC,CAAC,QAAQ;YACpB,IAAI,EAAE,CAAC,CAAC,IAAI;SACf,CAAC,CAAC;QACH,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;QAChE,YAAY,EAAE,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,QAAQ,EAAE,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;KACzE,CAAC;IAEF,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}

package/dist/src/mcp/tools/health-tools.js

@@ -1,7 +1,7 @@
-import { wrapResponse, getMaxDepth } from '../tool-response.js';
+import { wrapResponse, getMinDepthLevel } from '../tool-response.js';
 export async function handleGetHealth(ctx) {
     const report = await ctx.health.analyze();
-    const depth = await getMaxDepth(ctx.cortexRepo);
+    const depth = await getMinDepthLevel(ctx.cortexRepo);
     return wrapResponse(report, depth, false);
 }
 //# sourceMappingURL=health-tools.js.map

package/dist/src/mcp/tools/health-tools.js.map

@@ -1 +1 @@
-{"version":3,"file":"health-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/health-tools.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAEhE,MAAM,CAAC,KAAK,UAAU,eAAe,CAAC,GAAkB;IACpD,MAAM,MAAM,GAAG,MAAM,GAAG,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;IAC1C,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAChD,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}
+{"version":3,"file":"health-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/health-tools.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAErE,MAAM,CAAC,KAAK,UAAU,eAAe,CAAC,GAAkB;IACpD,MAAM,MAAM,GAAG,MAAM,GAAG,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;IAC1C,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IACrD,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}

package/dist/src/mcp/tools/impact-tools.js

@@ -1,8 +1,8 @@
 import { GitImpactAnalyzer } from '#core/git-impact.js';
-import { wrapResponse, getMaxDepth } from '../tool-response.js';
+import { wrapResponse, getMinDepthLevel } from '../tool-response.js';
 export async function handleGetImpact(ctx, input) {
     const maxDepth = input.maxDepth ?? 3;
-    const depth = await getMaxDepth(ctx.cortexRepo);
+    const depth = await getMinDepthLevel(ctx.cortexRepo);
     if (!ctx.graph.hasNode(input.target)) {
         return wrapResponse({
             depths: {
@@ -17,7 +17,7 @@ export async function handleGetImpact(ctx, input) {
 export async function handleDetectChanges(ctx, input) {
     const gitImpact = new GitImpactAnalyzer(ctx.graph);
     const result = await gitImpact.analyzeWorkingChanges(input.cwd);
-    const depth = await getMaxDepth(ctx.cortexRepo);
+    const depth = await getMinDepthLevel(ctx.cortexRepo);
     return wrapResponse(result, depth, false);
 }
 //# sourceMappingURL=impact-tools.js.map

package/dist/src/mcp/tools/impact-tools.js.map

@@ -1 +1 @@
-{"version":3,"file":"impact-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/impact-tools.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAMxD,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAahE,MAAM,CAAC,KAAK,UAAU,eAAe,CACjC,GAAsB,EACtB,KAAqB;IAErB,MAAM,QAAQ,GAAG,KAAK,CAAC,QAAQ,IAAI,CAAC,CAAC;IACrC,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAEhD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,CAAC;QACnC,OAAO,YAAY,CACf;YACI,MAAM,EAAE;gBACJ,CAAC,EAAE,CAAC,EAAE,IAAI,EAAE,KAAK,CAAC,MAAM,EAAE,KAAK,EAAE,CAAC,EAAE,IAAI,EAAE,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,GAAG,EAAE,CAAC;aAC/E;YACD,OAAO,EAAE,EAAE,aAAa,EAAE,CAAC,EAAE,aAAa,EAAE,CAAC,EAAE,SAAS,EAAE,KAAK,EAAE;SACpE,EACD,KAAK,EACL,KAAK,CACR,CAAC;IACN,CAAC;IAED,MAAM,MAAM,GAAG,GAAG,CAAC,MAAM,CAAC,cAAc,CAAC,KAAK,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;IACjE,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC;AAMD,MAAM,CAAC,KAAK,UAAU,mBAAmB,CACrC,GAAsB,EACtB,KAAyB;IAEzB,MAAM,SAAS,GAAG,IAAI,iBAAiB,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;IACnD,MAAM,MAAM,GAAG,MAAM,SAAS,CAAC,qBAAqB,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;IAChE,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAChD,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}
+{"version":3,"file":"impact-tools.js","sourceRoot":"","sources":["../../../../src/mcp/tools/impact-tools.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAMxD,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,MAAM,qBAAqB,CAAC;AAarE,MAAM,CAAC,KAAK,UAAU,eAAe,CACjC,GAAsB,EACtB,KAAqB;IAErB,MAAM,QAAQ,GAAG,KAAK,CAAC,QAAQ,IAAI,CAAC,CAAC;IACrC,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAErD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,CAAC;QACnC,OAAO,YAAY,CACf;YACI,MAAM,EAAE;gBACJ,CAAC,EAAE,CAAC,EAAE,IAAI,EAAE,KAAK,CAAC,MAAM,EAAE,KAAK,EAAE,CAAC,EAAE,IAAI,EAAE,CAAC,KAAK,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,GAAG,EAAE,CAAC;aAC/E;YACD,OAAO,EAAE,EAAE,aAAa,EAAE,CAAC,EAAE,aAAa,EAAE,CAAC,EAAE,SAAS,EAAE,KAAK,EAAE;SACpE,EACD,KAAK,EACL,KAAK,CACR,CAAC;IACN,CAAC;IAED,MAAM,MAAM,GAAG,GAAG,CAAC,MAAM,CAAC,cAAc,CAAC,KAAK,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAC;IACjE,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC;AAMD,MAAM,CAAC,KAAK,UAAU,mBAAmB,CACrC,GAAsB,EACtB,KAAyB;IAEzB,MAAM,SAAS,GAAG,IAAI,iBAAiB,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;IACnD,MAAM,MAAM,GAAG,MAAM,SAAS,CAAC,qBAAqB,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;IAChE,MAAM,KAAK,GAAG,MAAM,gBAAgB,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IACrD,OAAO,YAAY,CAAC,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AAC9C,CAAC"}

package/dist/src/mcp/tools/project-tools.js

@@ -49,9 +49,9 @@ export async function handleGetProjectOverview(ctx) {
 }
 export async function handleGetContextForFile(ctx, input) {
     const fileCtx = await ctx.graph.getFileContext(input.filePath);
-    const allConstraints = await ctx.intent.listEntries('constraint');
+    const allConstraints = await ctx.intent.listEntries('constraint', { status: 'active' });
     const constraints = allConstraints.filter((c) => c.frontmatter.scope === 'global' || input.filePath.startsWith(c.frontmatter.scope));
-    const allDecisions = await ctx.intent.listEntries('decision');
+    const allDecisions = await ctx.intent.listEntries('decision', { status: 'active' });
     const decisions = allDecisions.filter((d) => d.frontmatter.scope === 'global' || input.filePath.startsWith(d.frontmatter.scope));
     const depth = await getMaxDepth(ctx.cortexRepo);
     return wrapResponse({

package/dist/src/mcp/tools/project-tools.js.map

@@ -1 +1 @@
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package/dist/src/mcp/tools/rename-tool.d.ts

@@ -7,7 +7,6 @@ export interface RenameToolContext {
 export interface RenameSymbolInput {
     symbol: string;
     newName: string;
-    scope?: 'file' | 'project';
 }
 export interface RenameChange {
     file: string;

package/dist/src/mcp/tools/rename-tool.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"rename-tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp/tools/rename-tool.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAC;AAC9D,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAGrD,MAAM,WAAW,iBAAiB;IAC9B,UAAU,EAAE,gBAAgB,CAAC;IAC7B,OAAO,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,iBAAiB;IAC9B,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,GAAG,SAAS,CAAC;CAC9B;AAED,MAAM,WAAW,YAAY;IACzB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,YAAY;IACzB,OAAO,EAAE,YAAY,EAAE,CAAC;CAC3B;AAED,MAAM,WAAW,WAAW;IACxB,KAAK,EAAE,MAAM,CAAC;CACjB;AAED,wBAAsB,kBAAkB,CACpC,GAAG,EAAE,iBAAiB,EACtB,KAAK,EAAE,iBAAiB,GACzB,OAAO,CAAC,YAAY,CAAC,YAAY,GAAG,WAAW,CAAC,CAAC,CAqBnD"}
+{"version":3,"file":"rename-tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp/tools/rename-tool.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAC;AAC9D,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAGrD,MAAM,WAAW,iBAAiB;IAC9B,UAAU,EAAE,gBAAgB,CAAC;IAC7B,OAAO,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,iBAAiB;IAC9B,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,YAAY;IACzB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,YAAY;IACzB,OAAO,EAAE,YAAY,EAAE,CAAC;CAC3B;AAED,MAAM,WAAW,WAAW;IACxB,KAAK,EAAE,MAAM,CAAC;CACjB;AAED,wBAAsB,kBAAkB,CACpC,GAAG,EAAE,iBAAiB,EACtB,KAAK,EAAE,iBAAiB,GACzB,OAAO,CAAC,YAAY,CAAC,YAAY,GAAG,WAAW,CAAC,CAAC,CAqBnD"}

package/dist/src/mcp/tools/rename-tool.js

@@ -51,11 +51,14 @@ function addCallerChanges(ctx, callers, oldName, newName, changes) {
         const lineText = lines[caller.line - 1];
         if (!lineText || !lineText.includes(oldName))
             continue;
+        const escaped = oldName.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
+        const pattern = new RegExp(`\\b${escaped}\\b`, 'g');
+        const newText = lineText.replace(pattern, newName);
         changes.push({
             file: filePath,
             line: caller.line,
             oldText: lineText,
-            newText: lineText.replaceAll(oldName, newName),
+            newText,
         });
     }
 }
@@ -76,11 +79,14 @@ function addImportChanges(ctx, importers, oldName, newName, changes) {
         const lineText = lines[imp.line - 1];
         if (!lineText || !lineText.includes(oldName))
             continue;
+        const escaped = oldName.replace(/[.*+?^${}()|[\]\\]/g, '\\$&');
+        const pattern = new RegExp(`\\b${escaped}\\b`, 'g');
+        const newText = lineText.replace(pattern, newName);
         changes.push({
             file: filePath,
             line: imp.line,
             oldText: lineText,
-            newText: lineText.replaceAll(oldName, newName),
+            newText,
         });
     }
 }

package/dist/src/mcp/tools/rename-tool.js.map

@@ -1 +1 @@
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+{"version":3,"file":"rename-tool.js","sourceRoot":"","sources":["../../../../src/mcp/tools/rename-tool.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,SAAS,CAAC;AACvC,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAGpC,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AA2BhE,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACpC,GAAsB,EACtB,KAAwB;IAExB,MAAM,KAAK,GAAG,MAAM,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;IAChD,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;IAEnE,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACvB,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QAC9D,IAAI,CAAC,IAAI,EAAE,CAAC;YACR,OAAO,YAAY,CAAC,EAAE,KAAK,EAAE,WAAW,KAAK,CAAC,MAAM,aAAa,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;QACvF,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACvB,CAAC;IAED,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;IAC1B,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,UAAU,CAAC,sBAAsB,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IACpE,MAAM,OAAO,GAAmB,EAAE,CAAC;IAEnC,mBAAmB,CAAC,GAAG,EAAE,MAAM,EAAE,KAAK,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IACzD,gBAAgB,CAAC,GAAG,EAAE,IAAI,CAAC,OAAO,EAAE,MAAM,CAAC,IAAI,EAAE,KAAK,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IACzE,gBAAgB,CAAC,GAAG,EAAE,IAAI,CAAC,SAAS,EAAE,MAAM,CAAC,IAAI,EAAE,KAAK,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IAE3E,OAAO,YAAY,CAAC,EAAE,OAAO,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;AACnD,CAAC;AAED,SAAS,mBAAmB,CACxB,GAAsB,EACtB,MAA6D,EAC7D,OAAe,EACf,OAAuB;IAEvB,MAAM,OAAO,GAAG,YAAY,CAAC,GAAG,CAAC,OAAO,EAAE,MAAM,CAAC,QAAQ,CAAC,CAAC;IAC3D,IAAI,CAAC,OAAO;QAAE,OAAO;IAErB,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;IAClC,MAAM,IAAI,GAAG,KAAK,CAAC,MAAM,CAAC,SAAS,GAAG,CAAC,CAAC,CAAC;IACzC,IAAI,CAAC,IAAI;QAAE,OAAO;IAElB,MAAM,GAAG,GAAG,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IACtC,IAAI,GAAG,KAAK,CAAC,CAAC;QAAE,OAAO;IAEvB,OAAO,CAAC,IAAI,CAAC;QACT,IAAI,EAAE,MAAM,CAAC,QAAQ;QACrB,IAAI,EAAE,MAAM,CAAC,SAAS;QACtB,OAAO,EAAE,IAAI;QACb,OAAO,EAAE,IAAI,CAAC,SAAS,CAAC,CAAC,EAAE,GAAG,CAAC,GAAG,OAAO,GAAG,IAAI,CAAC,SAAS,CAAC,GAAG,GAAG,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC;KACvF,CAAC,CAAC;AACP,CAAC;AAED,SAAS,gBAAgB,CACrB,GAAsB,EACtB,OAAyD,EACzD,OAAe,EACf,OAAe,EACf,OAAuB;IAEvB,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;QAC3B,IAAI,CAAC,MAAM,CAAC,IAAI;YAAE,SAAS;QAC3B,MAAM,QAAQ,GAAG,eAAe,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;QAClD,IAAI,CAAC,QAAQ;YAAE,SAAS;QAExB,MAAM,OAAO,GAAG,YAAY,CAAC,GAAG,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACpD,IAAI,CAAC,OAAO;YAAE,SAAS;QAEvB,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;QAClC,MAAM,QAAQ,GAAG,KAAK,CAAC,MAAM,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC;QACxC,IAAI,CAAC,QAAQ,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC;YAAE,SAAS;QAEvD,MAAM,OAAO,GAAG,OAAO,CAAC,OAAO,CAAC,qBAAqB,EAAE,MAAM,CAAC,CAAC;QAC/D,MAAM,OAAO,GAAG,IAAI,MAAM,CAAC,MAAM,OAAO,KAAK,EAAE,GAAG,CAAC,CAAC;QACpD,MAAM,OAAO,GAAG,QAAQ,CAAC,OAAO,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC;YACT,IAAI,EAAE,QAAQ;YACd,IAAI,EAAE,MAAM,CAAC,IAAI;YACjB,OAAO,EAAE,QAAQ;YACjB,OAAO;SACV,CAAC,CAAC;IACP,CAAC;AACL,CAAC;AAED,SAAS,gBAAgB,CACrB,GAAsB,EACtB,SAIE,EACF,OAAe,EACf,OAAe,EACf,OAAuB;IAEvB,KAAK,MAAM,GAAG,IAAI,SAAS,EAAE,CAAC;QAC1B,IAAI,CAAC,GAAG,CAAC,IAAI;YAAE,SAAS;QACxB,MAAM,YAAY,GAAG,GAAG,CAAC,YAAY,IAAI,OAAO,CAAC;QACjD,IAAI,YAAY,KAAK,OAAO;YAAE,SAAS;QAEvC,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;QAC/C,IAAI,CAAC,QAAQ;YAAE,SAAS;QAExB,MAAM,OAAO,GAAG,YAAY,CAAC,GAAG,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACpD,IAAI,CAAC,OAAO;YAAE,SAAS;QAEvB,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;QAClC,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC;QACrC,IAAI,CAAC,QAAQ,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,OAAO,CAAC;YAAE,SAAS;QAEvD,MAAM,OAAO,GAAG,OAAO,CAAC,OAAO,CAAC,qBAAqB,EAAE,MAAM,CAAC,CAAC;QAC/D,MAAM,OAAO,GAAG,IAAI,MAAM,CAAC,MAAM,OAAO,KAAK,EAAE,GAAG,CAAC,CAAC;QACpD,MAAM,OAAO,GAAG,QAAQ,CAAC,OAAO,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC;YACT,IAAI,EAAE,QAAQ;YACd,IAAI,EAAE,GAAG,CAAC,IAAI;YACd,OAAO,EAAE,QAAQ;YACjB,OAAO;SACV,CAAC,CAAC;IACP,CAAC;AACL,CAAC;AAED,SAAS,eAAe,CAAC,MAAc;IACnC,MAAM,QAAQ,GAAG,CAAC,KAAK,EAAE,QAAQ,EAAE,SAAS,EAAE,YAAY,EAAE,OAAO,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC;IACtF,KAAK,MAAM,MAAM,IAAI,QAAQ,EAAE,CAAC;QAC5B,IAAI,MAAM,CAAC,UAAU,CAAC,MAAM,CAAC,EAAE,CAAC;YAC5B,MAAM,IAAI,GAAG,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;YACzC,MAAM,QAAQ,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;YACnC,OAAO,QAAQ,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC;QAChE,CAAC;IACL,CAAC;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,YAAY,CAAC,OAAe,EAAE,QAAgB;IACnD,IAAI,CAAC;QACD,OAAO,YAAY,CAAC,OAAO,CAAC,OAAO,EAAE,QAAQ,CAAC,EAAE,OAAO,CAAC,CAAC;IAC7D,CAAC;IAAC,MAAM,CAAC;QACL,OAAO,IAAI,CAAC;IAChB,CAAC;AACL,CAAC"}

package/dist/src/storage/db.js

@@ -75,7 +75,7 @@ export class SymbioteDB {
             prepared.bindBoolean(index, value);
         }
         else {
-            prepared.bindVarchar(index, String(value));
+            prepared.bindVarchar(index, JSON.stringify(value));
         }
     }
 }

package/dist/src/storage/db.js.map

@@ -1 +1 @@
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package/dist/src/storage/repository.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"repository.d.ts","sourceRoot":"","sources":["../../../src/storage/repository.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AAE1C,MAAM,WAAW,UAAU;IACvB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,QAAQ,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACtC;AAED,MAAM,WAAW,UAAU;IACvB,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,MAAM,CAAC;IACjB,IAAI,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,UAAU;IACvB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;CACvB;AAuCD,qBAAa,UAAU;IACP,OAAO,CAAC,EAAE;gBAAF,EAAE,EAAE,UAAU;IAE5B,UAAU,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAYrD,OAAO,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,GAAG,SAAS,CAAC;IAY1D,aAAa,CAAC,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC;IAMlE,WAAW,CAAC,KAAK,EAAE,UAAU,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAsC/C,iBAAiB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAuBlD,eAAe,CACjB,QAAQ,EAAE,MAAM,EAChB,IAAI,EAAE,MAAM,EACZ,KAAK,EAAE,UAAU,EAAE,EACnB,KAAK,EAAE,UAAU,EAAE,GACpB,OAAO,CAAC,IAAI,CAAC;IA+EV,cAAc,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IASvD,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,GAAG,SAAS,CAAC;IAOxD,aAAa,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,GAAG,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;IAc9D,iBAAiB,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IASvD,WAAW,CAAC,KAAK,EAAE,UAAU,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IA2B/C,eAAe,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IAMtD,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IAMpD,oBAAoB,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IAU9D,kBAAkB,CAAC,OAAO,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC;IAU5D,QAAQ,IAAI,OAAO,CAAC;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC;IAcpE,kBAAkB,IAAI,OAAO,CAAC,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IAYrD,OAAO,CAAC,KAAK,GAAE,MAAW,GAAG,OAAO,CAAC,KAAK,CAAC;QAAE,IAAI,EAAE,UAAU,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IAqBpF,WAAW,IAAI,OAAO,CAAC,UAAU,EAAE,CAAC;IAMpC,WAAW,IAAI,OAAO,CAAC,UAAU,EAAE,CAAC;IAM1C,OAAO,CAAC,UAAU;IAkBlB,OAAO,CAAC,UAAU;CAOrB"}

package/dist/src/storage/repository.js

@@ -70,6 +70,7 @@ export class Repository {
         await this.db.exec('BEGIN TRANSACTION');
         try {
             await this.db.run('DELETE FROM edges WHERE source_id IN (SELECT id FROM nodes WHERE file_path = $1)', filePath);
+            await this.db.run('DELETE FROM edges WHERE target_id IN (SELECT id FROM nodes WHERE file_path = $1)', filePath);
             await this.db.run('DELETE FROM nodes WHERE file_path = $1', filePath);
             if (nodes.length > 0) {
                 const CHUNK_SIZE = 500;

package/dist/src/storage/repository.js.map

@@ -1 +1 @@
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