sverklo 0.5.2 → 0.6.0

package/dist/src/server/http-server.js.map

@@ -1 +1 @@
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package/dist/src/server/mcp-server.js

@@ -26,6 +26,7 @@ import { diffSearchTool, handleDiffSearch } from "./tools/diff-search.js";
 import { testMapTool, handleTestMap } from "./tools/test-map.js";
 import { contextTool, handleContext } from "./tools/context.js";
 import { promoteTool, demoteTool, handlePromote, handleDemote, } from "./tools/tier.js";
+import { clustersTool, handleClusters } from "./tools/clusters.js";
 import { startHttpServer } from "./http-server.js";
 import { track } from "../telemetry/index.js";
 import { applyToolOverrides } from "./tool-overrides.js";
@@ -250,6 +251,7 @@ export async function startMcpServer(rootPath) {
         diffSearchTool,
         testMapTool,
         astGrepTool,
+        clustersTool,
         ...(enableZilliz
             ? [indexCodebaseTool, searchCodeTool, clearIndexTool, getIndexingStatusTool]
             : []),
@@ -337,6 +339,9 @@ export async function startMcpServer(rootPath) {
                 case "sverklo_demote":
                     result = handleDemote(indexer, args || {});
                     break;
+                case "sverklo_clusters":
+                    result = handleClusters(indexer, args || {});
+                    break;
                 // ── Zilliz claude-context compatibility aliases ──────────────
                 case "search_code": {
                     // Map claude-context arg names (path, limit) to sverklo's (scope, token_budget)

package/dist/src/server/mcp-server.js.map

@@ -1 +1 @@
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package/dist/src/server/tools/clusters.d.ts

@@ -0,0 +1,20 @@
+import type { Indexer } from "../../indexer/indexer.js";
+import { type FileCluster } from "../../search/cluster.js";
+export declare const clustersTool: {
+    name: string;
+    description: string;
+    inputSchema: {
+        type: "object";
+        properties: {
+            min_size: {
+                type: string;
+                description: string;
+            };
+        };
+    };
+};
+export declare function handleClusters(indexer: Indexer, args: Record<string, unknown>): string;
+/**
+ * Return clusters as structured data for the HTTP API / dashboard.
+ */
+export declare function getClustersJSON(indexer: Indexer): FileCluster[];

package/dist/src/server/tools/clusters.js

@@ -0,0 +1,92 @@
+import { detectClusters } from "../../search/cluster.js";
+export const clustersTool = {
+    name: "sverklo_clusters",
+    description: "Detect functional clusters in the codebase — groups of tightly-connected files that form logical modules. " +
+        "Useful for understanding architecture, finding module boundaries, and identifying tightly-coupled subsystems.",
+    inputSchema: {
+        type: "object",
+        properties: {
+            min_size: {
+                type: "number",
+                description: "Minimum cluster size to show (default 3)",
+            },
+        },
+    },
+};
+export function handleClusters(indexer, args) {
+    const minSize = args.min_size || 3;
+    // Gather files and edges from the index
+    const files = indexer.fileStore.getAll();
+    if (files.length === 0) {
+        return "No files indexed yet. Run sverklo_status to check indexing progress.";
+    }
+    const allEdges = indexer.graphStore.getAll();
+    // Build file ID set for filtering edges to indexed files only
+    const fileIdSet = new Set(files.map(f => f.id));
+    const clusterFiles = files.map(f => ({
+        id: f.id,
+        path: f.path,
+        pagerank: f.pagerank,
+        language: f.language || "unknown",
+    }));
+    const clusterEdges = allEdges
+        .filter(e => fileIdSet.has(e.source_file_id) && fileIdSet.has(e.target_file_id))
+        .map(e => ({
+        source: e.source_file_id,
+        target: e.target_file_id,
+        weight: e.reference_count,
+    }));
+    const clusters = detectClusters(clusterFiles, clusterEdges);
+    // Filter by min_size
+    const visible = clusters.filter(c => c.size >= minSize);
+    if (visible.length === 0) {
+        return `No clusters with ${minSize}+ files detected. The codebase may be too small or loosely connected.`;
+    }
+    // Format output
+    const parts = [];
+    parts.push(`## Codebase clusters (${visible.length} detected)\n`);
+    for (const cluster of visible) {
+        parts.push(formatCluster(cluster));
+    }
+    return parts.join("\n");
+}
+function formatCluster(cluster) {
+    const lines = [];
+    // Header: name, size, hub
+    const hubName = cluster.hubFile.split("/").pop() || cluster.hubFile;
+    lines.push(`### ${cluster.id}. ${cluster.name} (${cluster.size} files, hub: ${hubName})`);
+    // Show top files (up to 8) sorted by PageRank
+    const shown = cluster.files.slice(0, 8);
+    for (const f of shown) {
+        const fileName = f.path.split("/").pop() || f.path;
+        lines.push(`  · ${fileName} (PR: ${f.pagerank.toFixed(3)})`);
+    }
+    if (cluster.files.length > 8) {
+        lines.push(`  · ... and ${cluster.files.length - 8} more`);
+    }
+    lines.push("");
+    return lines.join("\n");
+}
+/**
+ * Return clusters as structured data for the HTTP API / dashboard.
+ */
+export function getClustersJSON(indexer) {
+    const files = indexer.fileStore.getAll();
+    const allEdges = indexer.graphStore.getAll();
+    const fileIdSet = new Set(files.map(f => f.id));
+    const clusterFiles = files.map(f => ({
+        id: f.id,
+        path: f.path,
+        pagerank: f.pagerank,
+        language: f.language || "unknown",
+    }));
+    const clusterEdges = allEdges
+        .filter(e => fileIdSet.has(e.source_file_id) && fileIdSet.has(e.target_file_id))
+        .map(e => ({
+        source: e.source_file_id,
+        target: e.target_file_id,
+        weight: e.reference_count,
+    }));
+    return detectClusters(clusterFiles, clusterEdges);
+}
+//# sourceMappingURL=clusters.js.map

package/dist/src/server/tools/clusters.js.map

@@ -0,0 +1 @@
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package/dist/src/wiki/wiki-generator.d.ts

@@ -0,0 +1,12 @@
+import type { Indexer } from "../indexer/indexer.js";
+export interface WikiOptions {
+    outputDir: string;
+    format: "markdown" | "html";
+    includeGraph?: boolean;
+}
+/**
+ * Generate a markdown wiki from the indexed codebase.
+ * Entirely deterministic — no LLM calls. All data comes from
+ * the Indexer's stores (files, chunks, graph, symbol refs, PageRank).
+ */
+export declare function generateWiki(indexer: Indexer, options: WikiOptions): Promise<void>;

package/dist/src/wiki/wiki-generator.js

@@ -0,0 +1,357 @@
+import { mkdir, writeFile } from "node:fs/promises";
+import { join, basename } from "node:path";
+/**
+ * Generate a markdown wiki from the indexed codebase.
+ * Entirely deterministic — no LLM calls. All data comes from
+ * the Indexer's stores (files, chunks, graph, symbol refs, PageRank).
+ */
+export async function generateWiki(indexer, options) {
+    const { outputDir } = options;
+    // Ensure output directories exist
+    await mkdir(join(outputDir, "modules"), { recursive: true });
+    await mkdir(join(outputDir, "files"), { recursive: true });
+    // Load all data upfront
+    const allFiles = indexer.fileStore.getAll(); // sorted by pagerank DESC
+    const allEdges = indexer.graphStore.getAll();
+    const allChunksWithFile = indexer.chunkStore.getAllWithFile();
+    // Build lookup maps
+    const fileById = new Map();
+    const fileByPath = new Map();
+    for (const f of allFiles) {
+        fileById.set(f.id, f);
+        fileByPath.set(f.path, f);
+    }
+    const chunksByFileId = new Map();
+    for (const c of allChunksWithFile) {
+        const list = chunksByFileId.get(c.file_id) || [];
+        list.push(c);
+        chunksByFileId.set(c.file_id, list);
+    }
+    // Build import/importer maps (file_id -> file_id[])
+    const importsOf = new Map();
+    const importersOf = new Map();
+    for (const edge of allEdges) {
+        if (!importsOf.has(edge.source_file_id))
+            importsOf.set(edge.source_file_id, new Set());
+        importsOf.get(edge.source_file_id).add(edge.target_file_id);
+        if (!importersOf.has(edge.target_file_id))
+            importersOf.set(edge.target_file_id, new Set());
+        importersOf.get(edge.target_file_id).add(edge.source_file_id);
+    }
+    // Group files by top-level directory
+    const modules = groupByModule(allFiles);
+    // 1. Generate index.md
+    const indexMd = generateIndexPage(indexer, allFiles, allEdges, modules, options);
+    await writeFile(join(outputDir, "index.md"), indexMd, "utf-8");
+    // 2. Generate per-module pages
+    for (const mod of modules) {
+        const moduleMd = generateModulePage(mod, chunksByFileId, importsOf, importersOf, fileById, modules);
+        const safeName = mod.dir.replace(/\//g, "-") || "root";
+        await writeFile(join(outputDir, "modules", `${safeName}.md`), moduleMd, "utf-8");
+    }
+    // 3. Generate per-file pages for top 50 files by PageRank
+    const top50 = allFiles.slice(0, 50);
+    for (const file of top50) {
+        const chunks = chunksByFileId.get(file.id) || [];
+        const fileMd = generateFilePage(file, chunks, importsOf, importersOf, fileById, indexer);
+        const safeName = file.path.replace(/\//g, "-").replace(/\./g, "_");
+        await writeFile(join(outputDir, "files", `${safeName}.md`), fileMd, "utf-8");
+    }
+    // Summary to stdout
+    const totalPages = 1 + modules.length + top50.length;
+    console.log(`Wiki generated: ${totalPages} pages in ${outputDir}/`);
+    console.log(`  1 index + ${modules.length} modules + ${top50.length} file pages`);
+}
+// ---------------------------------------------------------------------------
+// Helpers
+// ---------------------------------------------------------------------------
+function groupByModule(files) {
+    const groups = new Map();
+    for (const f of files) {
+        const parts = f.path.split("/");
+        const dir = parts.length > 1 ? parts[0] : "(root)";
+        if (!groups.has(dir))
+            groups.set(dir, []);
+        groups.get(dir).push(f);
+    }
+    const modules = [];
+    for (const [dir, dirFiles] of groups) {
+        // Files are already sorted by pagerank DESC from the store
+        const hubFile = dirFiles.length > 0 ? dirFiles[0] : null;
+        modules.push({ dir, files: dirFiles, hubFile });
+    }
+    // Sort modules by total PageRank descending
+    modules.sort((a, b) => b.files.reduce((s, f) => s + f.pagerank, 0) -
+        a.files.reduce((s, f) => s + f.pagerank, 0));
+    return modules;
+}
+function generateIndexPage(indexer, allFiles, allEdges, modules, options) {
+    const status = indexer.getStatus();
+    const lines = [];
+    lines.push(`# ${status.projectName}`);
+    lines.push("");
+    lines.push(`> Auto-generated wiki from [sverklo](https://github.com/sverklo/sverklo) code index. ${allFiles.length} files indexed.`);
+    lines.push("");
+    // Language distribution
+    lines.push("## Language Distribution");
+    lines.push("");
+    const langCounts = new Map();
+    for (const f of allFiles) {
+        const lang = f.language || "unknown";
+        langCounts.set(lang, (langCounts.get(lang) || 0) + 1);
+    }
+    const sortedLangs = [...langCounts.entries()].sort((a, b) => b[1] - a[1]);
+    for (const [lang, count] of sortedLangs) {
+        const pct = ((count / allFiles.length) * 100).toFixed(1);
+        lines.push(`- **${lang}**: ${count} files (${pct}%)`);
+    }
+    lines.push("");
+    // Top 10 most important files
+    lines.push("## Key Files (by PageRank)");
+    lines.push("");
+    lines.push("| Rank | File | PageRank | Language |");
+    lines.push("|------|------|----------|----------|");
+    const top10 = allFiles.slice(0, 10);
+    for (let i = 0; i < top10.length; i++) {
+        const f = top10[i];
+        const safeName = f.path.replace(/\//g, "-").replace(/\./g, "_");
+        const link = `[${f.path}](files/${safeName}.md)`;
+        lines.push(`| ${i + 1} | ${link} | ${f.pagerank.toFixed(4)} | ${f.language || "—"} |`);
+    }
+    lines.push("");
+    // Dependency graph overview
+    lines.push("## Dependency Graph");
+    lines.push("");
+    const totalEdges = allEdges.length;
+    const filesWithImports = new Set(allEdges.map((e) => e.source_file_id)).size;
+    const filesWithImporters = new Set(allEdges.map((e) => e.target_file_id)).size;
+    const avgFanOut = filesWithImports > 0
+        ? (totalEdges / filesWithImports).toFixed(1)
+        : "0";
+    const avgFanIn = filesWithImporters > 0
+        ? (totalEdges / filesWithImporters).toFixed(1)
+        : "0";
+    lines.push(`- **Total edges**: ${totalEdges}`);
+    lines.push(`- **Files with imports**: ${filesWithImports}`);
+    lines.push(`- **Files with importers**: ${filesWithImporters}`);
+    lines.push(`- **Average fan-out**: ${avgFanOut}`);
+    lines.push(`- **Average fan-in**: ${avgFanIn}`);
+    lines.push("");
+    // Module listing
+    lines.push("## Modules");
+    lines.push("");
+    for (const mod of modules) {
+        const safeName = mod.dir.replace(/\//g, "-") || "root";
+        const totalPR = mod.files.reduce((s, f) => s + f.pagerank, 0).toFixed(4);
+        lines.push(`- [${mod.dir}](modules/${safeName}.md) — ${mod.files.length} files, total PageRank ${totalPR}`);
+    }
+    lines.push("");
+    return lines.join("\n");
+}
+function generateModulePage(mod, chunksByFileId, importsOf, importersOf, fileById, allModules) {
+    const lines = [];
+    lines.push(`# Module: ${mod.dir}`);
+    lines.push("");
+    lines.push(`${mod.files.length} files in this module.`);
+    if (mod.hubFile) {
+        lines.push(`Hub file (highest PageRank): **${mod.hubFile.path}** (${mod.hubFile.pagerank.toFixed(4)})`);
+    }
+    lines.push("");
+    // File list with PageRank
+    lines.push("## Files");
+    lines.push("");
+    lines.push("| File | PageRank | Language |");
+    lines.push("|------|----------|----------|");
+    for (const f of mod.files) {
+        const safeName = f.path.replace(/\//g, "-").replace(/\./g, "_");
+        const link = `[${basename(f.path)}](../files/${safeName}.md)`;
+        lines.push(`| ${link} | ${f.pagerank.toFixed(4)} | ${f.language || "—"} |`);
+    }
+    lines.push("");
+    // Key exports
+    lines.push("## Key Exports");
+    lines.push("");
+    const exportTypes = new Set(["function", "class", "type", "interface", "variable"]);
+    const exports = [];
+    for (const f of mod.files) {
+        const chunks = chunksByFileId.get(f.id) || [];
+        for (const c of chunks) {
+            if (exportTypes.has(c.type) && c.name) {
+                exports.push({
+                    name: c.name,
+                    type: c.type,
+                    file: f.path,
+                    signature: c.signature,
+                });
+            }
+        }
+    }
+    if (exports.length > 0) {
+        // Show up to 30 exports, sorted by type then name
+        exports.sort((a, b) => a.type.localeCompare(b.type) || a.name.localeCompare(b.name));
+        const shown = exports.slice(0, 30);
+        for (const ex of shown) {
+            const sig = ex.signature ? `: \`${ex.signature}\`` : "";
+            lines.push(`- **${ex.type}** \`${ex.name}\` in ${ex.file}${sig}`);
+        }
+        if (exports.length > 30) {
+            lines.push(`- _...and ${exports.length - 30} more_`);
+        }
+    }
+    else {
+        lines.push("_No named exports found._");
+    }
+    lines.push("");
+    // Internal dependencies
+    const modFileIds = new Set(mod.files.map((f) => f.id));
+    const internalEdges = [];
+    for (const f of mod.files) {
+        const targets = importsOf.get(f.id);
+        if (!targets)
+            continue;
+        for (const tid of targets) {
+            if (modFileIds.has(tid)) {
+                const target = fileById.get(tid);
+                if (target) {
+                    internalEdges.push({ from: f.path, to: target.path });
+                }
+            }
+        }
+    }
+    lines.push("## Internal Dependencies");
+    lines.push("");
+    if (internalEdges.length > 0) {
+        for (const edge of internalEdges.slice(0, 20)) {
+            lines.push(`- ${edge.from} → ${edge.to}`);
+        }
+        if (internalEdges.length > 20) {
+            lines.push(`- _...and ${internalEdges.length - 20} more_`);
+        }
+    }
+    else {
+        lines.push("_No internal dependencies._");
+    }
+    lines.push("");
+    // External dependencies
+    const externalImports = new Map(); // module dir -> count
+    const externalImporters = new Map();
+    for (const f of mod.files) {
+        const targets = importsOf.get(f.id);
+        if (targets) {
+            for (const tid of targets) {
+                if (!modFileIds.has(tid)) {
+                    const target = fileById.get(tid);
+                    if (target) {
+                        const tDir = target.path.split("/").length > 1 ? target.path.split("/")[0] : "(root)";
+                        externalImports.set(tDir, (externalImports.get(tDir) || 0) + 1);
+                    }
+                }
+            }
+        }
+        const sources = importersOf.get(f.id);
+        if (sources) {
+            for (const sid of sources) {
+                if (!modFileIds.has(sid)) {
+                    const source = fileById.get(sid);
+                    if (source) {
+                        const sDir = source.path.split("/").length > 1 ? source.path.split("/")[0] : "(root)";
+                        externalImporters.set(sDir, (externalImporters.get(sDir) || 0) + 1);
+                    }
+                }
+            }
+        }
+    }
+    lines.push("## External Dependencies");
+    lines.push("");
+    if (externalImports.size > 0 || externalImporters.size > 0) {
+        if (externalImports.size > 0) {
+            lines.push("**Imports from:**");
+            for (const [dir, count] of [...externalImports.entries()].sort((a, b) => b[1] - a[1])) {
+                lines.push(`- ${dir} (${count} edges)`);
+            }
+            lines.push("");
+        }
+        if (externalImporters.size > 0) {
+            lines.push("**Imported by:**");
+            for (const [dir, count] of [...externalImporters.entries()].sort((a, b) => b[1] - a[1])) {
+                lines.push(`- ${dir} (${count} edges)`);
+            }
+            lines.push("");
+        }
+    }
+    else {
+        lines.push("_No external dependencies._");
+        lines.push("");
+    }
+    return lines.join("\n");
+}
+function generateFilePage(file, chunks, importsOf, importersOf, fileById, indexer) {
+    const lines = [];
+    lines.push(`# ${file.path}`);
+    lines.push("");
+    lines.push("| Property | Value |");
+    lines.push("|----------|-------|");
+    lines.push(`| **Language** | ${file.language || "unknown"} |`);
+    lines.push(`| **PageRank** | ${file.pagerank.toFixed(4)} |`);
+    lines.push(`| **Size** | ${formatBytes(file.size_bytes)} |`);
+    lines.push("");
+    // Exported symbols with signatures
+    const exportTypes = new Set(["function", "class", "type", "interface", "method", "variable"]);
+    const namedChunks = chunks.filter((c) => exportTypes.has(c.type) && c.name);
+    if (namedChunks.length > 0) {
+        lines.push("## Symbols");
+        lines.push("");
+        lines.push("| Symbol | Type | Lines | References |");
+        lines.push("|--------|------|-------|------------|");
+        for (const c of namedChunks) {
+            const refCount = indexer.symbolRefStore.getCallerCount(c.name);
+            const lineRange = `${c.start_line}–${c.end_line}`;
+            const sig = c.signature ? ` \`${c.signature}\`` : "";
+            lines.push(`| **${c.name}**${sig} | ${c.type} | ${lineRange} | ${refCount} |`);
+        }
+        lines.push("");
+    }
+    // Imports (what this file depends on)
+    const importTargets = importsOf.get(file.id);
+    lines.push("## Imports");
+    lines.push("");
+    if (importTargets && importTargets.size > 0) {
+        for (const tid of importTargets) {
+            const target = fileById.get(tid);
+            if (target) {
+                const safeName = target.path.replace(/\//g, "-").replace(/\./g, "_");
+                lines.push(`- [${target.path}](${safeName}.md)`);
+            }
+        }
+    }
+    else {
+        lines.push("_No indexed imports._");
+    }
+    lines.push("");
+    // Importers (who depends on this file)
+    const importSources = importersOf.get(file.id);
+    lines.push("## Imported By");
+    lines.push("");
+    if (importSources && importSources.size > 0) {
+        for (const sid of importSources) {
+            const source = fileById.get(sid);
+            if (source) {
+                const safeName = source.path.replace(/\//g, "-").replace(/\./g, "_");
+                lines.push(`- [${source.path}](${safeName}.md)`);
+            }
+        }
+    }
+    else {
+        lines.push("_No indexed importers._");
+    }
+    lines.push("");
+    return lines.join("\n");
+}
+function formatBytes(bytes) {
+    if (bytes < 1024)
+        return `${bytes} B`;
+    if (bytes < 1024 * 1024)
+        return `${(bytes / 1024).toFixed(1)} KB`;
+    return `${(bytes / (1024 * 1024)).toFixed(1)} MB`;
+}
+//# sourceMappingURL=wiki-generator.js.map