substrate-ai 0.20.98 → 0.20.100

package/dist/adapter-registry-CW-0HEBL.js

@@ -0,0 +1,4 @@
+import { AdapterRegistry } from "./dist-BWwy_6uv.js";
+import "./adapter-registry-DIcrxjH8.js";
+
+export { AdapterRegistry };

package/dist/cli/index.js

@@ -1,20 +1,20 @@
 #!/usr/bin/env node
-import { FileStateStore, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createDatabaseAdapter, createDoltOperatorReader, createStateStore, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion } from "../health-OOK3rjFF.js";
+import { FileStateStore, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createDatabaseAdapter, createDoltOperatorReader, createStateStore, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion } from "../health-BUfapi3C.js";
 import { createLogger } from "../logger-KeHncl-f.js";
 import { createEventBus } from "../helpers-CElYrONe.js";
-import { AdapterRegistry, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, ConfigError, CostTrackerConfigSchema, DEFAULT_CONFIG, DoltClient, DoltNotInstalled, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProvidersSchema, RoutingRecommender, STORY_METRICS, TelemetryConfigSchema, addTokenUsage, aggregateTokenUsageForRun, checkDoltInstalled, compareRunMetrics, createAmendmentRun, createConfigSystem, createDecision, createDoltClient, createPipelineRun, getActiveDecisions, getAllCostEntriesFiltered, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initializeDolt, listRunMetrics, loadParentRunDecisions, supersedeDecision, swallowDebug, tagRunAsBaseline, updatePipelineRun } from "../dist-CR_3fEG2.js";
-import { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR, GitClient, GrammarLoader, Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runSolutioningPhase, unescape, validateStopAfterFromConflict } from "../run-CrxAXEBv.js";
+import { AdapterRegistry, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, ConfigError, CostTrackerConfigSchema, DEFAULT_CONFIG, DoltClient, DoltNotInstalled, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProvidersSchema, RoutingRecommender, STORY_METRICS, TelemetryConfigSchema, addTokenUsage, aggregateTokenUsageForRun, checkDoltInstalled, compareRunMetrics, createAmendmentRun, createConfigSystem, createDecision, createDoltClient, createPipelineRun, getActiveDecisions, getAllCostEntriesFiltered, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initWorkGraphSchema, initializeDolt, listRunMetrics, loadParentRunDecisions, supersedeDecision, swallowDebug, tagRunAsBaseline, updatePipelineRun } from "../dist-BWwy_6uv.js";
+import { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR, GitClient, GrammarLoader, Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runSolutioningPhase, unescape, validateStopAfterFromConflict } from "../run-BHDVWJVt.js";
 import "../adapter-registry-DIcrxjH8.js";
-import { RunManifest, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, parseRuntimeProbes, readCurrentRunId, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck } from "../manifest-read-6xIFhnb7.js";
-import "../errors-Bd-WQnjg.js";
+import { RunManifest, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, parseRuntimeProbes, readCurrentRunId, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck } from "../manifest-read-C1IQ75EP.js";
+import "../errors-u3LnOLzz.js";
 import "../routing-DFxoKHDt.js";
 import { WorkGraphRepository } from "../work-graph-repository-DZyJv5pV.js";
 import "../decisions-CzSIEeGP.js";
 import "../decision-router-DblHY8se.js";
-import "../interactive-prompt-CZkKFDXD.js";
+import "../interactive-prompt-BUDDSIRy.js";
 import "../recovery-engine-BKGBeBnW.js";
 import "../version-manager-impl-qFBiO4Eh.js";
-import { registerUpgradeCommand } from "../upgrade-BVXcLYQL.js";
+import { registerUpgradeCommand } from "../upgrade-BEZi9_nw.js";
 import { Command } from "commander";
 import { fileURLToPath } from "url";
 import { dirname, join, resolve } from "path";
@@ -6887,7 +6887,7 @@ async function runStatusAction(options) {
 			logger$15.debug({ err }, "Work graph query failed, continuing without work graph data");
 		}
 		if (run === void 0) {
-			const { inspectProcessTree: inspectProcessTree$1 } = await import("../health-B2rUCaye.js");
+			const { inspectProcessTree: inspectProcessTree$1 } = await import("../health-CMHssIjh.js");
 			const substrateDirPath = join(projectRoot, ".substrate");
 			const processInfo = inspectProcessTree$1({
 				projectRoot,
@@ -7835,7 +7835,7 @@ function defaultSupervisorDeps() {
 				if (cached === null) {
 					const { AdapterRegistry: AR } = await import(
 						/* @vite-ignore */
-						"../adapter-registry-CAw8hY6r.js"
+						"../adapter-registry-CW-0HEBL.js"
 );
 					cached = new AR();
 					await cached.discoverAndRegister();
@@ -8402,11 +8402,11 @@ async function runSupervisorAction(options, deps = {}) {
 						try {
 							const { createExperimenter } = await import(
 								/* @vite-ignore */
-								"../experimenter-BUdyuKsL.js"
+								"../experimenter-47l2ssez.js"
 );
 							const { getLatestRun: getLatest } = await import(
 								/* @vite-ignore */
-								"../decisions-DdTaohqm.js"
+								"../decisions-DfMQDPz3.js"
 );
 							const expAdapter = createDatabaseAdapter({
 								backend: "auto",
@@ -8416,7 +8416,7 @@ async function runSupervisorAction(options, deps = {}) {
 								await initSchema(expAdapter);
 								const { runRunAction: runPipeline } = await import(
 									/* @vite-ignore */
-									"../run-CiQed8OE.js"
+									"../run-BGWWSefD.js"
 );
 								const runStoryFn = async (opts) => {
 									const exitCode = await runPipeline({
@@ -8944,7 +8944,7 @@ async function runMetricsAction(options) {
 			const routingConfigPath = join(dbDir, "routing.yml");
 			let routingConfig = null;
 			if (existsSync$1(routingConfigPath)) try {
-				const { loadModelRoutingConfig } = await import("../routing-B8rnc4Ns.js");
+				const { loadModelRoutingConfig } = await import("../routing-DiUnQeFC.js");
 				routingConfig = loadModelRoutingConfig(routingConfigPath);
 			} catch {}
 			if (routingConfig === null) routingConfig = {
@@ -11956,59 +11956,6 @@ function registerRoutingCommand(program) {
 	});
 }
 
-//#endregion
-//#region src/modules/work-graph/schema.ts
-/**
-* Work-graph schema — legacy DDL constant exports.
-*
-* The canonical DDL lives in packages/core/src/persistence/work-graph-schema.ts
-* as `initWorkGraphSchema(adapter)`. This file is preserved as a thin shim
-* so the existing callers in `ingest-epic.ts` and `epic-status.ts` keep
-* working — they `await adapter.exec(CREATE_STORIES_TABLE)` directly rather
-* than invoking the function form.
-*
-* Post-Ship-5 (2026-05): the legacy constants here MUST stay in sync with
-* the function form in @substrate-ai/core. Future ports should consider
-* migrating callers to `initWorkGraphSchema(adapter)` and deleting this file
-* entirely.
-*/
-const CREATE_STORIES_TABLE = `
-CREATE TABLE IF NOT EXISTS wg_stories (
-  story_key VARCHAR(20) NOT NULL,
-  epic VARCHAR(20) NOT NULL,
-  title VARCHAR(255),
-  status VARCHAR(30) NOT NULL DEFAULT 'planned',
-  spec_path VARCHAR(500),
-  created_at DATETIME,
-  updated_at DATETIME,
-  completed_at DATETIME,
-  PRIMARY KEY (story_key)
-)
-`.trim();
-const CREATE_STORY_DEPENDENCIES_TABLE = `
-CREATE TABLE IF NOT EXISTS story_dependencies (
-  story_key VARCHAR(50) NOT NULL,
-  depends_on VARCHAR(50) NOT NULL,
-  dependency_type VARCHAR(50) NOT NULL DEFAULT 'blocks',
-  source VARCHAR(50) NOT NULL DEFAULT 'explicit',
-  created_at DATETIME,
-  PRIMARY KEY (story_key, depends_on)
-)
-`.trim();
-const CREATE_READY_STORIES_VIEW = `
-CREATE VIEW IF NOT EXISTS ready_stories AS
-SELECT s.*
-FROM wg_stories s
-WHERE s.status IN ('planned', 'ready')
-  AND NOT EXISTS (
-    SELECT 1 FROM story_dependencies sd
-    JOIN wg_stories blocking ON sd.depends_on = blocking.story_key
-    WHERE sd.story_key = s.story_key
-      AND sd.dependency_type = 'blocks'
-      AND blocking.status <> 'complete'
-  )
-`.trim();
-
 //#endregion
 //#region src/modules/work-graph/epic-parser.ts
 /** Regex for sprint header lines: `**Sprint 1 —` or `Sprint 1 —` (with or without bold markers) */
@@ -12143,8 +12090,7 @@ function registerIngestEpicCommand(program) {
 			basePath: process.cwd()
 		});
 		try {
-			await adapter.exec(CREATE_STORIES_TABLE);
-			await adapter.exec(CREATE_STORY_DEPENDENCIES_TABLE);
+			await initWorkGraphSchema(adapter);
 			const ingester = new EpicIngester(adapter);
 			const result = await ingester.ingest(stories, dependencies);
 			const epicNum = stories[0].epic_num;
@@ -12188,8 +12134,7 @@ async function runEpicStatusAction(epicNum, opts) {
 		basePath: process.cwd()
 	});
 	try {
-		await adapter.exec(CREATE_STORIES_TABLE);
-		await adapter.exec(CREATE_STORY_DEPENDENCIES_TABLE);
+		await initWorkGraphSchema(adapter);
 		const repo = new WorkGraphRepository(adapter);
 		const rawStories = await repo.listStories({ epic: epicNum });
 		if (rawStories.length === 0) {
@@ -13326,8 +13271,8 @@ async function createProgram() {
 /** Fire-and-forget startup version check (story 8.3, AC3/AC5) */
 function checkForUpdatesInBackground(currentVersion) {
 	if (process.env.SUBSTRATE_NO_UPDATE_CHECK === "1") return;
-	import("../upgrade-BxiW5XLZ.js").then(async () => {
-		const { createVersionManager } = await import("../version-manager-impl-DUxNv_A5.js");
+	import("../upgrade-CR13HV7X.js").then(async () => {
+		const { createVersionManager } = await import("../version-manager-impl-DxNTLWOT.js");
 		const vm = createVersionManager();
 		const result = await vm.checkForUpdates();
 		if (result.updateAvailable) {

package/dist/{decisions-DdTaohqm.js → decisions-DfMQDPz3.js}

@@ -1,4 +1,4 @@
-import { addTokenUsage, createDecision, createPipelineRun, createRequirement, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunningPipelineRuns, getTokenUsageSummary, listRequirements, registerArtifact, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision } from "./dist-CR_3fEG2.js";
+import { addTokenUsage, createDecision, createPipelineRun, createRequirement, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunningPipelineRuns, getTokenUsageSummary, listRequirements, registerArtifact, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision } from "./dist-BWwy_6uv.js";
 import "./decisions-CzSIEeGP.js";
 
 export { getLatestRun };

package/dist/{dist-CR_3fEG2.js → dist-BWwy_6uv.js}

@@ -2963,82 +2963,42 @@ async function initMonitorSchema(adapter) {
 
 //#endregion
 //#region packages/core/dist/persistence/state-schema.js
+/**
+* Legacy state-table cleanup — pre-2026-Q1 orchestrator state tables.
+*
+* Historical context: `stories`, `contracts`, `metrics`, `dispatch_log`,
+* `build_results`, `review_verdicts` (+ vestigial `_schema_version`) were
+* defined as the substrate-state surface in `schema.sql`. Ship 1 (v0.20.92)
+* excised the corresponding DoltStateStore CRUD methods after auditing every
+* production project (ynab, quant) and finding all six tables empty — the
+* orchestrator wires `FileStateStore` (in-memory), so DoltStateStore's write
+* methods never fired and these tables were perpetually empty.
+*
+* Ship 7 (v0.20.98) deleted the vestigial `_schema_version` table the same
+* way; Ship 8 (v0.20.99) extends that pattern to the remaining six legacy
+* tables. This module owns NO tables now — it survives only to drop the
+* legacy tables on existing repos (ynab, quant) at next `substrate run`.
+*
+* Fresh repos never see any of these tables; existing repos lose them on
+* next init via the DROP TABLE IF EXISTS block below.
+*
+* Note: monitor.db's `_schema_version` (in `.substrate/monitor.db`) is
+* intentionally distinct from the substrate-state `_schema_version` we
+* dropped — see monitor-database.ts.
+*/
+const LEGACY_TABLES = [
+	"_schema_version",
+	"stories",
+	"contracts",
+	"metrics",
+	"dispatch_log",
+	"build_results",
+	"review_verdicts"
+];
 async function initStateSchema(adapter) {
-	try {
-		await adapter.exec("DROP TABLE IF EXISTS _schema_version");
+	for (const table of LEGACY_TABLES) try {
+		await adapter.exec(`DROP TABLE IF EXISTS ${table}`);
 	} catch {}
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS stories (
-      story_key       VARCHAR(100)   NOT NULL,
-      sprint          VARCHAR(50),
-      status          VARCHAR(30)    NOT NULL DEFAULT 'PENDING',
-      phase           VARCHAR(30)    NOT NULL DEFAULT 'PENDING',
-      ac_results      JSON,
-      error_message   TEXT,
-      created_at      DATETIME,
-      updated_at      DATETIME,
-      completed_at    DATETIME,
-      PRIMARY KEY (story_key)
-    )
-  `);
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS contracts (
-      story_key    VARCHAR(100)   NOT NULL,
-      name         VARCHAR(200)   NOT NULL,
-      direction    VARCHAR(20)    NOT NULL,
-      schema_path  VARCHAR(500),
-      transport    VARCHAR(200),
-      recorded_at  DATETIME,
-      PRIMARY KEY (story_key, name, direction)
-    )
-  `);
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS metrics (
-      story_key          VARCHAR(100)   NOT NULL,
-      task_type          VARCHAR(100)   NOT NULL,
-      recorded_at        DATETIME       NOT NULL,
-      model              VARCHAR(100),
-      tokens_in          BIGINT         NOT NULL DEFAULT 0,
-      tokens_out         BIGINT         NOT NULL DEFAULT 0,
-      cache_read_tokens  BIGINT         NOT NULL DEFAULT 0,
-      cost_usd           DECIMAL(10,6)  NOT NULL DEFAULT 0,
-      wall_clock_ms      BIGINT         NOT NULL DEFAULT 0,
-      review_cycles      INT            NOT NULL DEFAULT 0,
-      stall_count        INT            NOT NULL DEFAULT 0,
-      result             VARCHAR(30),
-      PRIMARY KEY (story_key, task_type, recorded_at)
-    )
-  `);
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS dispatch_log (
-      story_key      VARCHAR(100)   NOT NULL,
-      dispatched_at  DATETIME       NOT NULL,
-      branch         VARCHAR(200),
-      worker_id      VARCHAR(100),
-      result         VARCHAR(30),
-      PRIMARY KEY (story_key, dispatched_at)
-    )
-  `);
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS build_results (
-      story_key    VARCHAR(100)   NOT NULL,
-      timestamp    DATETIME       NOT NULL,
-      command      VARCHAR(500),
-      exit_code    INT,
-      stdout_hash  VARCHAR(64),
-      PRIMARY KEY (story_key, timestamp)
-    )
-  `);
-	await adapter.exec(`
-    CREATE TABLE IF NOT EXISTS review_verdicts (
-      story_key     VARCHAR(100)   NOT NULL,
-      timestamp     DATETIME       NOT NULL,
-      verdict       VARCHAR(30),
-      issues_count  INT            NOT NULL DEFAULT 0,
-      notes         TEXT,
-      PRIMARY KEY (story_key, timestamp)
-    )
-  `);
 }
 
 //#endregion
@@ -11292,5 +11252,5 @@ async function callLLM(params) {
 }
 
 //#endregion
-export { ADVISORY_NOTES, AdapterRegistry, AdtError, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, Categorizer, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, ConsumerAnalyzer, CostTrackerConfigSchema, DEFAULT_CONFIG, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, DoltNotInstalled, DoltQueryError, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, GeminiCLIAdapter, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, LEARNING_FINDING, LogTurnAnalyzer, ModelRoutingConfigSchema, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProviderPolicySchema, ProvidersSchema, Recommender, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TASK_TYPE_PHASE_MAP, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryConfigSchema, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, VersionManagerImpl, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, callLLM, checkDoltInstalled, classifyVersionGap, compareRunMetrics, createAmendmentRun, createConfigSystem, createDatabaseAdapter as createDatabaseAdapter$1, createDecision, createDoltClient, createExperimenter, createPipelineRun, createRequirement, createVersionManager, detectInterfaceChanges, determineVerdict, getActiveDecisions, getAllCostEntriesFiltered, getArtifactByTypeForRun, getArtifactsByRun, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getModelTier, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initializeDolt, listRequirements, listRunMetrics, loadModelRoutingConfig, loadParentRunDecisions, registerArtifact, resolvePromptFile, supersedeDecision, swallowDebug, tagRunAsBaseline, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics };
-//# sourceMappingURL=dist-CR_3fEG2.js.map
+export { ADVISORY_NOTES, AdapterRegistry, AdtError, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, Categorizer, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, ConsumerAnalyzer, CostTrackerConfigSchema, DEFAULT_CONFIG, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, DoltNotInstalled, DoltQueryError, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, GeminiCLIAdapter, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, LEARNING_FINDING, LogTurnAnalyzer, ModelRoutingConfigSchema, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProviderPolicySchema, ProvidersSchema, Recommender, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TASK_TYPE_PHASE_MAP, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryConfigSchema, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, VersionManagerImpl, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, callLLM, checkDoltInstalled, classifyVersionGap, compareRunMetrics, createAmendmentRun, createConfigSystem, createDatabaseAdapter as createDatabaseAdapter$1, createDecision, createDoltClient, createExperimenter, createPipelineRun, createRequirement, createVersionManager, detectInterfaceChanges, determineVerdict, getActiveDecisions, getAllCostEntriesFiltered, getArtifactByTypeForRun, getArtifactsByRun, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getModelTier, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initWorkGraphSchema, initializeDolt, listRequirements, listRunMetrics, loadModelRoutingConfig, loadParentRunDecisions, registerArtifact, resolvePromptFile, supersedeDecision, swallowDebug, tagRunAsBaseline, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics };
+//# sourceMappingURL=dist-BWwy_6uv.js.map

package/dist/{errors-Bd-WQnjg.js → errors-u3LnOLzz.js}

@@ -1,4 +1,4 @@
-import { AdtError } from "./dist-CR_3fEG2.js";
+import { AdtError } from "./dist-BWwy_6uv.js";
 
 //#region src/core/errors.ts
 /** Error thrown when task configuration is invalid */
@@ -71,4 +71,4 @@ var TaskGraphIncompatibleFormatError = class extends AdtError {
 
 //#endregion
 export { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError };
-//# sourceMappingURL=errors-Bd-WQnjg.js.map
+//# sourceMappingURL=errors-u3LnOLzz.js.map

package/dist/{experimenter-BUdyuKsL.js → experimenter-47l2ssez.js}

@@ -1,3 +1,3 @@
-import { buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, createExperimenter, determineVerdict, resolvePromptFile } from "./dist-CR_3fEG2.js";
+import { buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, createExperimenter, determineVerdict, resolvePromptFile } from "./dist-BWwy_6uv.js";
 
 export { createExperimenter };

package/dist/{health-OOK3rjFF.js → health-BUfapi3C.js}

@@ -1,6 +1,6 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { DoltClient, DoltQueryError, createDatabaseAdapter$1 as createDatabaseAdapter, getLatestRun, getPipelineRunById, initSchema } from "./dist-CR_3fEG2.js";
-import { resolveMainRepoRoot, resolveRunManifest } from "./manifest-read-6xIFhnb7.js";
+import { DoltClient, DoltQueryError, createDatabaseAdapter$1 as createDatabaseAdapter, getLatestRun, getPipelineRunById, initSchema } from "./dist-BWwy_6uv.js";
+import { resolveMainRepoRoot, resolveRunManifest } from "./manifest-read-C1IQ75EP.js";
 import { createRequire } from "module";
 import { dirname, join } from "path";
 import { existsSync, readFileSync } from "node:fs";
@@ -137,7 +137,7 @@ const BMAD_BASELINE_TOKENS_FULL = 56800;
 /** BMAD baseline token total for create+dev+review comparison */
 const BMAD_BASELINE_TOKENS = 23800;
 /** Story key pattern: e.g. "10-1", "1-1a", "NEW-26", "E6" */
-const STORY_KEY_PATTERN$1 = /^[A-Za-z0-9]+(-[A-Za-z0-9]+)?$/;
+const STORY_KEY_PATTERN = /^[A-Za-z0-9]+(-[A-Za-z0-9]+)?$/;
 /**
 * Top-level keys in .claude/settings.json that substrate owns.
 * On init, these are set/updated unconditionally.
@@ -197,7 +197,7 @@ function formatTokenTelemetry(summary, baselineTokens = BMAD_BASELINE_TOKENS) {
 * Validate a story key has the expected format: <epic>-<story> (e.g., "10-1").
 */
 function validateStoryKey(key) {
-	return STORY_KEY_PATTERN$1.test(key);
+	return STORY_KEY_PATTERN.test(key);
 }
 /**
 * Build the AC5 JSON status schema for a pipeline run.
@@ -491,63 +491,17 @@ var FileStateStore = class {
 			await writeFile(filePath, JSON.stringify(serialized, null, 2), "utf-8");
 		}
 	}
-	async branchForStory(_storyKey) {}
-	async mergeStory(_storyKey) {}
-	async rollbackStory(_storyKey) {}
 	async getHistory(_limit) {
 		return [];
 	}
 };
 
-//#endregion
-//#region src/modules/state/errors.ts
-/**
-* Typed error classes for the Dolt state store.
-*/
-var StateStoreError = class extends Error {
-	code;
-	constructor(code, message) {
-		super(message);
-		this.name = "StateStoreError";
-		this.code = code;
-	}
-};
-var DoltMergeConflictError = class extends StateStoreError {
-	table;
-	conflictingKeys;
-	rowKey;
-	ourValue;
-	theirValue;
-	constructor(table, conflictingKeys, options) {
-		super("DOLT_MERGE_CONFLICT", `Merge conflict in table '${table}' on keys: ${conflictingKeys.join(", ")}`);
-		this.name = "DoltMergeConflictError";
-		this.table = table;
-		this.conflictingKeys = conflictingKeys;
-		if (options) {
-			this.rowKey = options.rowKey;
-			this.ourValue = options.ourValue;
-			this.theirValue = options.theirValue;
-		}
-	}
-};
-/** Alias for DoltMergeConflictError — used by orchestrator branch lifecycle. */
-const DoltMergeConflict = DoltMergeConflictError;
-
 //#endregion
 //#region src/modules/state/dolt-store.ts
 const log = createLogger("modules:state:dolt");
-/**
-* Validate that a story key matches the expected pattern (e.g. "26-7", "1-1a", "NEW-26", "E6").
-* Prevents SQL injection via string-interpolated identifiers.
-*/
-const STORY_KEY_PATTERN = /^[A-Za-z0-9]+(-[A-Za-z0-9]+)?$/;
-function assertValidStoryKey(storyKey) {
-	if (!STORY_KEY_PATTERN.test(storyKey)) throw new DoltQueryError("assertValidStoryKey", `Invalid story key: '${storyKey}'. Must match pattern <key> or <epic>-<story> (e.g. "E6", "10-1", "1-1a", "NEW-26").`);
-}
 var DoltStateStore = class {
 	_repoPath;
 	_client;
-	_storyBranches = new Map();
 	/** In-memory KV store for per-run arbitrary metrics. Not persisted to Dolt. */
 	_kvMetrics = new Map();
 	constructor(options) {
@@ -556,135 +510,11 @@ var DoltStateStore = class {
 	}
 	async initialize() {
 		await this._client.connect();
-		await this._runMigrations();
-		await this.flush("substrate: schema migrations");
 		log.debug("DoltStateStore initialized at %s", this._repoPath);
 	}
 	async close() {
 		await this._client.close();
 	}
-	/**
-	* Idempotent runtime migration: add `repo_map_symbols.dependencies` JSON column
-	* if the table exists and the column doesn't. Skips silently when the table
-	* is absent (fresh DB or non-Dolt env).
-	*/
-	async _runMigrations() {
-		try {
-			const colRows = await this._client.query(`SHOW COLUMNS FROM repo_map_symbols LIKE 'dependencies'`);
-			if (colRows.length === 0) {
-				await this._client.query(`ALTER TABLE repo_map_symbols ADD COLUMN dependencies JSON`);
-				log.info({
-					component: "dolt-state",
-					migration: "v5-to-v6",
-					column: "dependencies",
-					table: "repo_map_symbols"
-				}, "Applied migration v5-to-v6: added dependencies column to repo_map_symbols");
-			}
-		} catch {
-			log.debug("Skipping repo_map_symbols migration: table not yet created");
-		}
-		log.debug("Schema migrations applied");
-	}
-	/**
-	* Commit pending Dolt changes on the current branch.
-	* Callers can invoke this after a batch of writes for explicit durability.
-	*/
-	async flush(message = "substrate: auto-commit") {
-		try {
-			await this._client.execArgs(["add", "."]);
-			await this._client.execArgs([
-				"commit",
-				"--allow-empty",
-				"-m",
-				message
-			]);
-			log.debug("Dolt flush committed: %s", message);
-		} catch (err) {
-			const detail = err instanceof Error ? err.message : String(err);
-			log.warn({ detail }, "Dolt flush failed (non-fatal)");
-		}
-	}
-	async branchForStory(storyKey) {
-		assertValidStoryKey(storyKey);
-		const branchName = `story/${storyKey}`;
-		try {
-			await this._client.query(`CALL DOLT_BRANCH('${branchName}')`, [], "main");
-			this._storyBranches.set(storyKey, branchName);
-			log.debug("Created Dolt branch %s for story %s", branchName, storyKey);
-		} catch (err) {
-			const detail = err instanceof Error ? err.message : String(err);
-			throw new DoltQueryError(`CALL DOLT_BRANCH('${branchName}')`, detail);
-		}
-	}
-	async mergeStory(storyKey) {
-		assertValidStoryKey(storyKey);
-		const branchName = this._storyBranches.get(storyKey);
-		if (branchName === void 0) {
-			log.warn({ storyKey }, "mergeStory called but no branch registered — no-op");
-			return;
-		}
-		try {
-			try {
-				await this._client.query(`CALL DOLT_ADD('-A')`, [], branchName);
-				await this._client.query(`CALL DOLT_COMMIT('-m', 'Story ${storyKey}: pre-merge commit', '--allow-empty')`, [], branchName);
-			} catch {}
-			try {
-				await this._client.query(`CALL DOLT_ADD('-A')`, [], "main");
-				await this._client.query(`CALL DOLT_COMMIT('-m', 'substrate: pre-merge auto-commit', '--allow-empty')`, [], "main");
-			} catch {}
-			const mergeRows = await this._client.query(`CALL DOLT_MERGE('${branchName}')`, [], "main");
-			const mergeResult = mergeRows[0];
-			if (mergeResult && (mergeResult.conflicts ?? 0) > 0) {
-				let table = "unknown";
-				let rowKey = "unknown";
-				let ourValue;
-				let theirValue;
-				try {
-					const conflictRows = await this._client.query(`SELECT table_name FROM dolt_conflicts LIMIT 1`, [], "main");
-					if (conflictRows.length > 0) table = String(conflictRows[0]["table_name"] ?? "unknown");
-				} catch {}
-				this._storyBranches.delete(storyKey);
-				throw new DoltMergeConflictError(table, [rowKey], {
-					rowKey,
-					ourValue,
-					theirValue
-				});
-			}
-			try {
-				await this._client.query(`CALL DOLT_COMMIT('-m', 'Merge story ${storyKey}: COMPLETE')`, [], "main");
-			} catch (commitErr) {
-				const msg = commitErr instanceof Error ? commitErr.message : String(commitErr);
-				if (!msg.includes("nothing to commit")) throw commitErr;
-			}
-			this._storyBranches.delete(storyKey);
-			log.debug("Merged branch %s into main for story %s", branchName, storyKey);
-		} catch (err) {
-			if (err instanceof DoltMergeConflictError) throw err;
-			const detail = err instanceof Error ? err.message : String(err);
-			throw new DoltQueryError(`CALL DOLT_MERGE('${branchName}')`, detail);
-		}
-	}
-	async rollbackStory(storyKey) {
-		assertValidStoryKey(storyKey);
-		const branchName = this._storyBranches.get(storyKey);
-		if (branchName === void 0) {
-			log.warn({ storyKey }, "rollbackStory called but no branch registered — no-op");
-			return;
-		}
-		try {
-			await this._client.query(`CALL DOLT_BRANCH('-D', '${branchName}')`, [], "main");
-			this._storyBranches.delete(storyKey);
-			log.debug("Rolled back (deleted) branch %s for story %s", branchName, storyKey);
-		} catch (err) {
-			const detail = err instanceof Error ? err.message : String(err);
-			log.warn({
-				detail,
-				storyKey,
-				branchName
-			}, "rollbackStory failed (non-fatal)");
-			this._storyBranches.delete(storyKey);
-		}
-	}
 	async setMetric(runId, key, value) {
 		let runMap = this._kvMetrics.get(runId);
 		if (runMap === void 0) {
@@ -1230,5 +1060,5 @@ function registerHealthCommand(program, _version = "0.0.0", projectRoot = proces
 }
 
 //#endregion
-export { BMAD_BASELINE_TOKENS_FULL, DEFAULT_STALL_THRESHOLD_SECONDS, DoltMergeConflict, FileStateStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN$1 as STORY_KEY_PATTERN, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter$1 as createDatabaseAdapter, createDoltOperatorReader, createStateStore, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, isOrchestratorProcessLine, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, runHealthAction, validateStoryKey };
-//# sourceMappingURL=health-OOK3rjFF.js.map
+export { BMAD_BASELINE_TOKENS_FULL, DEFAULT_STALL_THRESHOLD_SECONDS, FileStateStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter$1 as createDatabaseAdapter, createDoltOperatorReader, createStateStore, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, isOrchestratorProcessLine, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, runHealthAction, validateStoryKey };
+//# sourceMappingURL=health-BUfapi3C.js.map

package/dist/{health-B2rUCaye.js → health-CMHssIjh.js}

@@ -1,7 +1,7 @@
-import { DEFAULT_STALL_THRESHOLD_SECONDS, getAllDescendantPids, getAutoHealthData, inspectProcessTree, isOrchestratorProcessLine, registerHealthCommand, runHealthAction } from "./health-OOK3rjFF.js";
+import { DEFAULT_STALL_THRESHOLD_SECONDS, getAllDescendantPids, getAutoHealthData, inspectProcessTree, isOrchestratorProcessLine, registerHealthCommand, runHealthAction } from "./health-BUfapi3C.js";
 import "./logger-KeHncl-f.js";
-import "./dist-CR_3fEG2.js";
-import "./manifest-read-6xIFhnb7.js";
+import "./dist-BWwy_6uv.js";
+import "./manifest-read-C1IQ75EP.js";
 import "./work-graph-repository-DZyJv5pV.js";
 import "./decisions-CzSIEeGP.js";
 

package/dist/index.d.ts

@@ -1697,11 +1697,6 @@ interface OrchestratorEvents {
     modifiedInterfaces: string[];
     potentiallyAffectedTests: string[];
   };
-  /** Dolt merge conflict detected when merging a story branch into main */
-  'pipeline:state-conflict': {
-    storyKey: string;
-    conflict: unknown;
-  };
   /**
    * Emitted at pipeline startup when the repo-map symbol index is detected as
    * stale (HEAD SHA has changed since the last index update). Non-blocking —

package/dist/index.js

@@ -1,8 +1,8 @@
 import { childLogger, createLogger, logger } from "./logger-KeHncl-f.js";
 import { assertDefined, createEventBus, createTuiApp, deepClone, formatDuration, generateId, isPlainObject, isTuiCapable, printNonTtyWarning, sleep, withRetry } from "./helpers-CElYrONe.js";
-import { AdapterRegistry, AdtError, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, GeminiCLIAdapter } from "./dist-CR_3fEG2.js";
+import { AdapterRegistry, AdtError, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, GeminiCLIAdapter } from "./dist-BWwy_6uv.js";
 import "./adapter-registry-DIcrxjH8.js";
-import { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError } from "./errors-Bd-WQnjg.js";
+import { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError } from "./errors-u3LnOLzz.js";
 
 //#region src/core/di.ts
 /**

package/dist/{interactive-prompt-CZkKFDXD.js → interactive-prompt-BUDDSIRy.js}

@@ -1,5 +1,5 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { readCurrentRunId, resolveMainRepoRoot } from "./manifest-read-6xIFhnb7.js";
+import { readCurrentRunId, resolveMainRepoRoot } from "./manifest-read-C1IQ75EP.js";
 import { join } from "node:path";
 import { mkdir, readFile, writeFile } from "node:fs/promises";
 import * as readline from "node:readline";
@@ -180,4 +180,4 @@ async function runInteractivePrompt(decisionContext) {
 
 //#endregion
 export { runInteractivePrompt };
-//# sourceMappingURL=interactive-prompt-CZkKFDXD.js.map
+//# sourceMappingURL=interactive-prompt-BUDDSIRy.js.map

package/dist/{manifest-read-6xIFhnb7.js → manifest-read-C1IQ75EP.js}

@@ -1,5 +1,5 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { LEARNING_FINDING, createDecision, getDecisionsByCategory } from "./dist-CR_3fEG2.js";
+import { LEARNING_FINDING, createDecision, getDecisionsByCategory } from "./dist-BWwy_6uv.js";
 import * as path$1 from "path";
 import { join } from "path";
 import { readFile } from "fs/promises";
@@ -5845,4 +5845,4 @@ async function resolveRunManifest(dbRoot, runId) {
 
 //#endregion
 export { FindingsInjector, RunManifest, RuntimeProbeListSchema, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, parseRuntimeProbes, readCurrentRunId, renderFindings, resolveGraphPath, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck, runStaleVerificationRecovery };
-//# sourceMappingURL=manifest-read-6xIFhnb7.js.map
+//# sourceMappingURL=manifest-read-C1IQ75EP.js.map

package/dist/modules/interactive-prompt/index.js

@@ -1,6 +1,6 @@
 import "../../logger-KeHncl-f.js";
-import "../../dist-CR_3fEG2.js";
-import "../../manifest-read-6xIFhnb7.js";
-import { runInteractivePrompt } from "../../interactive-prompt-CZkKFDXD.js";
+import "../../dist-BWwy_6uv.js";
+import "../../manifest-read-C1IQ75EP.js";
+import { runInteractivePrompt } from "../../interactive-prompt-BUDDSIRy.js";
 
 export { runInteractivePrompt };

package/dist/{routing-B8rnc4Ns.js → routing-DiUnQeFC.js}

@@ -1,4 +1,4 @@
-import { ModelRoutingConfigSchema, ProviderPolicySchema, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, TASK_TYPE_PHASE_MAP, getModelTier, loadModelRoutingConfig } from "./dist-CR_3fEG2.js";
+import { ModelRoutingConfigSchema, ProviderPolicySchema, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, TASK_TYPE_PHASE_MAP, getModelTier, loadModelRoutingConfig } from "./dist-BWwy_6uv.js";
 import "./routing-DFxoKHDt.js";
 
 export { loadModelRoutingConfig };

package/dist/{run-CiQed8OE.js → run-BGWWSefD.js}

@@ -1,14 +1,14 @@
-import "./health-OOK3rjFF.js";
+import "./health-BUfapi3C.js";
 import "./logger-KeHncl-f.js";
 import "./helpers-CElYrONe.js";
-import "./dist-CR_3fEG2.js";
-import { normalizeGraphSummaryToStatus, registerRunCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, runRunAction, wireNdjsonEmitter } from "./run-CrxAXEBv.js";
-import "./manifest-read-6xIFhnb7.js";
+import "./dist-BWwy_6uv.js";
+import { normalizeGraphSummaryToStatus, registerRunCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, runRunAction, wireNdjsonEmitter } from "./run-BHDVWJVt.js";
+import "./manifest-read-C1IQ75EP.js";
 import "./routing-DFxoKHDt.js";
 import "./work-graph-repository-DZyJv5pV.js";
 import "./decisions-CzSIEeGP.js";
 import "./decision-router-DblHY8se.js";
-import "./interactive-prompt-CZkKFDXD.js";
+import "./interactive-prompt-BUDDSIRy.js";
 import "./recovery-engine-BKGBeBnW.js";
 
 export { runRunAction };

package/dist/{run-CrxAXEBv.js → run-BHDVWJVt.js}

@@ -1,11 +1,11 @@
-import { BMAD_BASELINE_TOKENS_FULL, DoltMergeConflict, FileStateStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter, formatOutput, formatPipelineSummary, formatTokenTelemetry, inspectProcessTree, parseDbTimestampAsUtc, validateStoryKey } from "./health-OOK3rjFF.js";
+import { BMAD_BASELINE_TOKENS_FULL, FileStateStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter, formatOutput, formatPipelineSummary, formatTokenTelemetry, inspectProcessTree, parseDbTimestampAsUtc, validateStoryKey } from "./health-BUfapi3C.js";
 import { createLogger } from "./logger-KeHncl-f.js";
 import { TypedEventBusImpl, createEventBus, createTuiApp, isTuiCapable, printNonTtyWarning, sleep } from "./helpers-CElYrONe.js";
-import { ADVISORY_NOTES, Categorizer, ConsumerAnalyzer, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, IngestionServer, LogTurnAnalyzer, OPERATIONAL_FINDING, Recommender, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, callLLM, classifyVersionGap, createConfigSystem, createDatabaseAdapter$1, createDecision, createPipelineRun, createRequirement, detectInterfaceChanges, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunMetrics, getRunningPipelineRuns, getStoryMetricsForRun, getTokenUsageSummary, initSchema, listRequirements, loadModelRoutingConfig, registerArtifact, swallowDebug, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics } from "./dist-CR_3fEG2.js";
-import { FindingsInjector, RunManifest, RuntimeProbeListSchema, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, renderFindings, resolveGraphPath, resolveMainRepoRoot, runAcTraceabilityCheck, runStaleVerificationRecovery } from "./manifest-read-6xIFhnb7.js";
+import { ADVISORY_NOTES, Categorizer, ConsumerAnalyzer, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, IngestionServer, LogTurnAnalyzer, OPERATIONAL_FINDING, Recommender, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, callLLM, classifyVersionGap, createConfigSystem, createDatabaseAdapter$1, createDecision, createPipelineRun, createRequirement, detectInterfaceChanges, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunMetrics, getRunningPipelineRuns, getStoryMetricsForRun, getTokenUsageSummary, initSchema, listRequirements, loadModelRoutingConfig, registerArtifact, swallowDebug, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics } from "./dist-BWwy_6uv.js";
+import { FindingsInjector, RunManifest, RuntimeProbeListSchema, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, renderFindings, resolveGraphPath, resolveMainRepoRoot, runAcTraceabilityCheck, runStaleVerificationRecovery } from "./manifest-read-C1IQ75EP.js";
 import { WorkGraphRepository, detectCycles } from "./work-graph-repository-DZyJv5pV.js";
 import { deriveExitCode, routeDecision } from "./decision-router-DblHY8se.js";
-import { runInteractivePrompt } from "./interactive-prompt-CZkKFDXD.js";
+import { runInteractivePrompt } from "./interactive-prompt-BUDDSIRy.js";
 import { runRecoveryEngine } from "./recovery-engine-BKGBeBnW.js";
 import { basename, dirname, extname, join } from "path";
 import { access, readFile, readdir, stat } from "fs/promises";
@@ -13699,20 +13699,6 @@ function createImplementationOrchestrator(deps) {
 				err,
 				storyKey
 			}, "StateStore write failed after updateStory"));
-			if (updates.phase === "COMPLETE") stateStore?.mergeStory(storyKey).catch((err) => {
-				if (err instanceof DoltMergeConflict) eventBus.emit("pipeline:state-conflict", {
-					storyKey,
-					conflict: err
-				});
-				else logger$27.warn({
-					err,
-					storyKey
-				}, "mergeStory failed");
-			});
-			else if (updates.phase === "ESCALATED" || updates.phase === "VERIFICATION_FAILED") stateStore?.rollbackStory(storyKey).catch((err) => logger$27.warn({
-				err,
-				storyKey
-			}, "rollbackStory failed — branch may persist"));
 			if (updates.phase !== void 0) {
 				const targetStatus = wgStatusForPhase(updates.phase);
 				if (targetStatus !== null) if (targetStatus === "in_progress" && _wgInProgressWritten.has(storyKey)) {} else {
@@ -13983,10 +13969,6 @@ function createImplementationOrchestrator(deps) {
 		let _capturedStoryTitle;
 		await waitIfPaused();
 		if (_state !== "RUNNING") return;
-		stateStore?.branchForStory(storyKey).catch((err) => logger$27.warn({
-			err,
-			storyKey
-		}, "branchForStory failed — continuing without branch isolation"));
 		startPhase(storyKey, "create-story");
 		updateStory(storyKey, {
 			phase: "IN_STORY_CREATION",
@@ -47137,7 +47119,7 @@ async function runFullPipeline(options) {
 */
 async function emitPreDispatchVersionAdvisory(currentVersion) {
 	if (process.env["SUBSTRATE_NO_UPDATE_CHECK"] === "1") return;
-	const { createVersionManager } = await import("./version-manager-impl-DUxNv_A5.js");
+	const { createVersionManager } = await import("./version-manager-impl-DxNTLWOT.js");
 	const vm = createVersionManager();
 	const result = await vm.checkForUpdates(true);
 	const gap = classifyVersionGap(currentVersion, result.latestVersion);
@@ -47234,4 +47216,4 @@ function registerRunCommand(program, version = "0.0.0", projectRoot = process.cw
 
 //#endregion
 export { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR$1 as GLOBSTAR, GitClient, GrammarLoader, Minimatch$1 as Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape$1 as escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, normalizeGraphSummaryToStatus, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runRunAction, runSolutioningPhase, unescape$1 as unescape, validateStopAfterFromConflict, wireNdjsonEmitter };
-//# sourceMappingURL=run-CrxAXEBv.js.map
+//# sourceMappingURL=run-BHDVWJVt.js.map

package/dist/src/modules/recovery-engine/index.d.ts

@@ -404,11 +404,6 @@ type SdlcEvents = CoreEvents & {
     /** 'pass' if zero mismatches, 'fail' otherwise */
     verdict: 'pass' | 'fail';
   };
-  /** Dolt merge conflict detected when merging a story branch into main */
-  'pipeline:state-conflict': {
-    storyKey: string;
-    conflict: unknown;
-  };
   /**
    * Emitted at pipeline startup when the repo-map symbol index is detected as stale.
    */

package/dist/{upgrade-BVXcLYQL.js → upgrade-BEZi9_nw.js}

@@ -1,4 +1,4 @@
-import { createVersionManager } from "./dist-CR_3fEG2.js";
+import { createVersionManager } from "./dist-BWwy_6uv.js";
 import { execSync, spawn } from "child_process";
 import * as readline from "readline";
 
@@ -123,4 +123,4 @@ function registerUpgradeCommand(program) {
 
 //#endregion
 export { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand };
-//# sourceMappingURL=upgrade-BVXcLYQL.js.map
+//# sourceMappingURL=upgrade-BEZi9_nw.js.map

package/dist/{upgrade-BxiW5XLZ.js → upgrade-CR13HV7X.js}

@@ -1,5 +1,5 @@
-import "./dist-CR_3fEG2.js";
+import "./dist-BWwy_6uv.js";
 import "./version-manager-impl-qFBiO4Eh.js";
-import { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand } from "./upgrade-BVXcLYQL.js";
+import { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand } from "./upgrade-BEZi9_nw.js";
 
 export { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand };

package/dist/{version-manager-impl-DUxNv_A5.js → version-manager-impl-DxNTLWOT.js}

@@ -1,4 +1,4 @@
-import { VersionManagerImpl, createVersionManager } from "./dist-CR_3fEG2.js";
+import { VersionManagerImpl, createVersionManager } from "./dist-BWwy_6uv.js";
 import "./version-manager-impl-qFBiO4Eh.js";
 
 export { createVersionManager };

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "substrate-ai",
-  "version": "0.20.98",
+  "version": "0.20.100",
   "description": "Substrate — multi-agent orchestration daemon for AI coding agents",
   "type": "module",
   "license": "MIT",

package/dist/adapter-registry-CAw8hY6r.js

@@ -1,4 +0,0 @@
-import { AdapterRegistry } from "./dist-CR_3fEG2.js";
-import "./adapter-registry-DIcrxjH8.js";
-
-export { AdapterRegistry };