substrate-ai 0.20.112 → 0.20.114

package/dist/adapter-registry-Dv83m9Uh.js

@@ -0,0 +1,4 @@
+import { AdapterRegistry } from "./dist-CW4d4JMj.js";
+import "./adapter-registry-DIcrxjH8.js";
+
+export { AdapterRegistry };

package/dist/cli/index.js

@@ -1,20 +1,20 @@
 #!/usr/bin/env node
-import { FileKvStore, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createDatabaseAdapter, createDoltOperatorReader, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion } from "../health-BZsEyfqX.js";
+import { FileKvStore, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createDatabaseAdapter, createDoltOperatorReader, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion } from "../health-DI5inO7P.js";
 import { createLogger } from "../logger-KeHncl-f.js";
 import { createEventBus } from "../helpers-CElYrONe.js";
-import { AdapterRegistry, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, ConfigError, CostTrackerConfigSchema, DEFAULT_CONFIG, DoltClient, DoltNotInstalled, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProvidersSchema, RoutingRecommender, STORY_METRICS, TelemetryConfigSchema, addTokenUsage, aggregateTokenUsageForRun, checkDoltInstalled, compareRunMetrics, createAmendmentRun, createConfigSystem, createDecision, createPipelineRun, createStderrLogger, getActiveDecisions, getAllCostEntriesFiltered, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initWorkGraphSchema, initializeDolt, listRunMetrics, loadParentRunDecisions, supersedeDecision, swallowDebug, tagRunAsBaseline, updatePipelineRun } from "../dist-NCtAx8Xo.js";
-import { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR, GitClient, GrammarLoader, Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runSolutioningPhase, unescape, validateStopAfterFromConflict } from "../run-DKVXaIgo.js";
+import { AdapterRegistry, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, ConfigError, CostTrackerConfigSchema, DEFAULT_CONFIG, DoltClient, DoltNotInstalled, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProvidersSchema, RoutingRecommender, STORY_METRICS, TelemetryConfigSchema, addTokenUsage, aggregateTokenUsageForRun, checkDoltInstalled, compareRunMetrics, createAmendmentRun, createConfigSystem, createDecision, createPipelineRun, createStderrLogger, getActiveDecisions, getAllCostEntriesFiltered, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initWorkGraphSchema, initializeDolt, listRunMetrics, loadParentRunDecisions, supersedeDecision, swallowDebug, tagRunAsBaseline, updatePipelineRun } from "../dist-CW4d4JMj.js";
+import { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR, GitClient, GrammarLoader, Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runSolutioningPhase, unescape, validateStopAfterFromConflict } from "../run-D1MuG0x6.js";
 import "../adapter-registry-DIcrxjH8.js";
-import { RunManifest, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, parseRuntimeProbes, readCurrentRunId, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck } from "../manifest-read-CgWpVLT_.js";
-import "../errors-CbWCo0EG.js";
+import { RunManifest, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, parseRuntimeProbes, readCurrentRunId, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck } from "../manifest-read-DwpffChw.js";
+import "../errors-Da7Izmsw.js";
 import "../routing-DFxoKHDt.js";
 import { WorkGraphRepository } from "../work-graph-repository-DZyJv5pV.js";
 import "../decisions-CzSIEeGP.js";
 import "../decision-router-DblHY8se.js";
-import "../interactive-prompt-DGRuUc6E.js";
+import "../interactive-prompt-Cpke493f.js";
 import "../recovery-engine-BKGBeBnW.js";
 import "../version-manager-impl-qFBiO4Eh.js";
-import { registerUpgradeCommand } from "../upgrade-f-U437AC.js";
+import { registerUpgradeCommand } from "../upgrade-W9n0n39E.js";
 import { Command } from "commander";
 import { fileURLToPath } from "url";
 import { dirname, join, resolve } from "path";
@@ -6890,7 +6890,7 @@ async function runStatusAction(options) {
 			logger$15.debug({ err }, "Work graph query failed, continuing without work graph data");
 		}
 		if (run === void 0) {
-			const { inspectProcessTree: inspectProcessTree$1 } = await import("../health-DDuluQFx.js");
+			const { inspectProcessTree: inspectProcessTree$1 } = await import("../health-Bc0Q5hGJ.js");
 			const substrateDirPath = join(projectRoot, ".substrate");
 			const processInfo = inspectProcessTree$1({
 				projectRoot,
@@ -7838,7 +7838,7 @@ function defaultSupervisorDeps() {
 				if (cached === null) {
 					const { AdapterRegistry: AR } = await import(
 						/* @vite-ignore */
-						"../adapter-registry-MDBNDWLV.js"
+						"../adapter-registry-Dv83m9Uh.js"
 );
 					cached = new AR();
 					await cached.discoverAndRegister();
@@ -8405,11 +8405,11 @@ async function runSupervisorAction(options, deps = {}) {
 						try {
 							const { createExperimenter } = await import(
 								/* @vite-ignore */
-								"../experimenter--g818ryF.js"
+								"../experimenter-Dvo-LfAe.js"
 );
 							const { getLatestRun: getLatest } = await import(
 								/* @vite-ignore */
-								"../decisions-U6v6DTBL.js"
+								"../decisions-BM12_hm6.js"
 );
 							const expAdapter = createDatabaseAdapter({
 								backend: "auto",
@@ -8419,7 +8419,7 @@ async function runSupervisorAction(options, deps = {}) {
 								await initSchema(expAdapter);
 								const { runRunAction: runPipeline } = await import(
 									/* @vite-ignore */
-									"../run-B7lFIS08.js"
+									"../run-9ngj072m.js"
 );
 								const runStoryFn = async (opts) => {
 									const exitCode = await runPipeline({
@@ -8944,7 +8944,7 @@ async function runMetricsAction(options) {
 			const routingConfigPath = join(dbDir, "routing.yml");
 			let routingConfig = null;
 			if (existsSync$1(routingConfigPath)) try {
-				const { loadModelRoutingConfig } = await import("../routing-Dnm12Fum.js");
+				const { loadModelRoutingConfig } = await import("../routing-BiT4IXk2.js");
 				routingConfig = loadModelRoutingConfig(routingConfigPath);
 			} catch {}
 			if (routingConfig === null) routingConfig = {
@@ -13226,8 +13226,8 @@ async function createProgram() {
 /** Fire-and-forget startup version check (story 8.3, AC3/AC5) */
 function checkForUpdatesInBackground(currentVersion) {
 	if (process.env.SUBSTRATE_NO_UPDATE_CHECK === "1") return;
-	import("../upgrade-DPg4GENq.js").then(async () => {
-		const { createVersionManager } = await import("../version-manager-impl-NE_GqZQu.js");
+	import("../upgrade-BciwetMn.js").then(async () => {
+		const { createVersionManager } = await import("../version-manager-impl-G82XqDMV.js");
 		const vm = createVersionManager();
 		const result = await vm.checkForUpdates();
 		if (result.updateAvailable) {

package/dist/{decisions-U6v6DTBL.js → decisions-BM12_hm6.js}

@@ -1,4 +1,4 @@
-import { addTokenUsage, createDecision, createPipelineRun, createRequirement, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunningPipelineRuns, getTokenUsageSummary, listRequirements, registerArtifact, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision } from "./dist-NCtAx8Xo.js";
+import { addTokenUsage, createDecision, createPipelineRun, createRequirement, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunningPipelineRuns, getTokenUsageSummary, listRequirements, registerArtifact, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision } from "./dist-CW4d4JMj.js";
 import "./decisions-CzSIEeGP.js";
 
 export { getLatestRun };

package/dist/{dist-NCtAx8Xo.js → dist-CW4d4JMj.js}

@@ -4828,6 +4828,37 @@ const noopLogger = {
 	warn: () => {},
 	error: () => {}
 };
+/**
+* Transient Dolt CLI lock errors. When multiple `dolt sql -q` subprocesses (or
+* a foreign process) touch the same repo's noms manifest concurrently, the
+* losers fail with "database is read only" / "cannot update manifest". The lock
+* releases in ~10-100ms, so a bounded retry-with-backoff recovers cleanly.
+*
+* This is substrate's CLI-mode concurrency fix (v0.20.113, F1): under
+* `concurrency:3` + the telemetry IngestionServer, simultaneous CLI writes to
+* `.substrate/state` collided 146+ times in one run, breaking wg_stories
+* updates, telemetry persistence, and the auto-commit step. The per-instance
+* promise mutex serializes promises but not the OS-level manifest lock release,
+* and cross-process writers bypass it entirely — so retry is the topology-
+* independent fix. (Pool/sql-server mode avoids this via MVCC and is unaffected.)
+*/
+const TRANSIENT_LOCK_RE = /database is read only|cannot update manifest|manifest.*lock|resource temporarily unavailable/i;
+/** Backoff schedule (ms) for transient-lock retries. Length = max retries. */
+const CLI_RETRY_BACKOFF_MS = [
+	50,
+	150,
+	400,
+	800,
+	1500
+];
+function isTransientLockError(err) {
+	const msg = err instanceof Error ? `${err.message}` : String(err);
+	const stderr = err?.stderr ?? "";
+	return TRANSIENT_LOCK_RE.test(msg) || TRANSIENT_LOCK_RE.test(stderr);
+}
+function sleep(ms) {
+	return new Promise((resolve$2) => setTimeout(resolve$2, ms));
+}
 var DoltClient = class {
 	repoPath;
 	socketPath;
@@ -4918,13 +4949,13 @@ var DoltClient = class {
 				const batchSql = `BEGIN; ${statements.join("; ")}; COMMIT`;
 				await this._withCliLock(async () => {
 					try {
-						await runExecFile("dolt", [
+						await this._runDoltWithRetry([
 							"sql",
 							"-q",
 							batchSql,
 							"--result-format",
 							"json"
-						], { cwd: this.repoPath });
+						], "transact");
 					} catch (err) {
 						throw new DoltQueryError(batchSql, err instanceof Error ? err.message : String(err));
 					}
@@ -4967,6 +4998,26 @@ var DoltClient = class {
 		return prev.then(fn).finally(() => release());
 	}
 	/**
+	* Run a `dolt` CLI subprocess, retrying on transient noms-manifest lock
+	* contention ("database is read only" / "cannot update manifest"). See
+	* TRANSIENT_LOCK_RE for the rationale. Non-transient errors throw immediately
+	* on the first attempt. The final attempt's error propagates unchanged so the
+	* caller's DoltQueryError wrapping is preserved. (v0.20.113, F1.)
+	*/
+	async _runDoltWithRetry(args, label) {
+		let lastErr;
+		for (let attempt = 0; attempt <= CLI_RETRY_BACKOFF_MS.length; attempt++) try {
+			return await runExecFile("dolt", args, { cwd: this.repoPath });
+		} catch (err) {
+			lastErr = err;
+			if (!isTransientLockError(err) || attempt === CLI_RETRY_BACKOFF_MS.length) throw err;
+			const backoff = CLI_RETRY_BACKOFF_MS[attempt];
+			this._log.warn(`[dolt-client] transient lock on ${label} (attempt ${attempt + 1}/${CLI_RETRY_BACKOFF_MS.length + 1}); retrying in ${backoff}ms`);
+			await sleep(backoff);
+		}
+		throw lastErr;
+	}
+	/**
 	* Substitute `?` placeholders in a SQL string with properly escaped literal
 	* values from the `params` array.  Used by both `_queryCli` and the CLI
 	* `transact` path to produce a fully-resolved SQL string for shell execution.
@@ -4993,7 +5044,7 @@ var DoltClient = class {
 					"--result-format",
 					"json"
 				];
-				const { stdout } = await runExecFile("dolt", args, { cwd: this.repoPath });
+				const { stdout } = await this._runDoltWithRetry(args, "query");
 				const lines = (stdout || "").trim().split("\n").filter(Boolean);
 				const lastLine = lines.length > 0 ? lines[lines.length - 1] : "{\"rows\":[]}";
 				const parsed = JSON.parse(lastLine);
@@ -5025,7 +5076,7 @@ var DoltClient = class {
 	async execArgs(args) {
 		return this._withCliLock(async () => {
 			try {
-				const { stdout } = await runExecFile("dolt", args, { cwd: this.repoPath });
+				const { stdout } = await this._runDoltWithRetry(args, "exec");
 				return stdout;
 			} catch (err) {
 				const detail = err instanceof Error ? err.message : String(err);
@@ -11222,4 +11273,4 @@ async function callLLM(params) {
 
 //#endregion
 export { ADVISORY_NOTES, AdapterRegistry, AdtError, BudgetConfigSchema, CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, Categorizer, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, ConsumerAnalyzer, CostTrackerConfigSchema, DEFAULT_CONFIG, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, DoltNotInstalled, DoltQueryError, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, GeminiCLIAdapter, GlobalSettingsSchema, InMemoryDatabaseAdapter, IngestionServer, LEARNING_FINDING, LogTurnAnalyzer, ModelRoutingConfigSchema, MonitorDatabaseImpl, OPERATIONAL_FINDING, PartialGlobalSettingsSchema, PartialProviderConfigSchema, ProviderPolicySchema, ProvidersSchema, Recommender, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TASK_TYPE_PHASE_MAP, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryConfigSchema, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, VersionManagerImpl, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, callLLM, checkDoltInstalled, classifyVersionGap, compareRunMetrics, createAmendmentRun, createConfigSystem, createDatabaseAdapter as createDatabaseAdapter$1, createDecision, createExperimenter, createPipelineRun, createRequirement, createStderrLogger, createVersionManager, detectInterfaceChanges, determineVerdict, getActiveDecisions, getAllCostEntriesFiltered, getArtifactByTypeForRun, getArtifactsByRun, getBaselineRunMetrics, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestCompletedRun, getLatestRun, getModelTier, getPipelineRunById, getPlanningCostTotal, getRetryableEscalations, getRunMetrics, getRunningPipelineRuns, getSessionCostSummary, getSessionCostSummaryFiltered, getStoryMetricsForRun, getTokenUsageSummary, incrementRunRestarts, initSchema, initWorkGraphSchema, initializeDolt, listRequirements, listRunMetrics, loadModelRoutingConfig, loadParentRunDecisions, registerArtifact, resolvePromptFile, supersedeDecision, swallowDebug, tagRunAsBaseline, updateDecision, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics };
-//# sourceMappingURL=dist-NCtAx8Xo.js.map
+//# sourceMappingURL=dist-CW4d4JMj.js.map

package/dist/{errors-CbWCo0EG.js → errors-Da7Izmsw.js}

@@ -1,4 +1,4 @@
-import { AdtError } from "./dist-NCtAx8Xo.js";
+import { AdtError } from "./dist-CW4d4JMj.js";
 
 //#region src/core/errors.ts
 /** Error thrown when task configuration is invalid */
@@ -71,4 +71,4 @@ var TaskGraphIncompatibleFormatError = class extends AdtError {
 
 //#endregion
 export { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError };
-//# sourceMappingURL=errors-CbWCo0EG.js.map
+//# sourceMappingURL=errors-Da7Izmsw.js.map

package/dist/{experimenter--g818ryF.js → experimenter-Dvo-LfAe.js}

@@ -1,3 +1,3 @@
-import { buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, createExperimenter, determineVerdict, resolvePromptFile } from "./dist-NCtAx8Xo.js";
+import { buildAuditLogEntry, buildBranchName, buildModificationDirective, buildPRBody, buildWorktreePath, createExperimenter, determineVerdict, resolvePromptFile } from "./dist-CW4d4JMj.js";
 
 export { createExperimenter };

package/dist/{health-DDuluQFx.js → health-Bc0Q5hGJ.js}

@@ -1,7 +1,7 @@
-import { DEFAULT_STALL_THRESHOLD_SECONDS, getAllDescendantPids, getAutoHealthData, inspectProcessTree, isOrchestratorProcessLine, registerHealthCommand, runHealthAction } from "./health-BZsEyfqX.js";
+import { DEFAULT_STALL_THRESHOLD_SECONDS, getAllDescendantPids, getAutoHealthData, inspectProcessTree, isOrchestratorProcessLine, registerHealthCommand, runHealthAction } from "./health-DI5inO7P.js";
 import "./logger-KeHncl-f.js";
-import "./dist-NCtAx8Xo.js";
-import "./manifest-read-CgWpVLT_.js";
+import "./dist-CW4d4JMj.js";
+import "./manifest-read-DwpffChw.js";
 import "./work-graph-repository-DZyJv5pV.js";
 import "./decisions-CzSIEeGP.js";
 

package/dist/{health-BZsEyfqX.js → health-DI5inO7P.js}

@@ -1,6 +1,6 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { DoltClient, DoltQueryError, createDatabaseAdapter$1 as createDatabaseAdapter, getLatestRun, getPipelineRunById, initSchema } from "./dist-NCtAx8Xo.js";
-import { resolveMainRepoRoot, resolveRunManifest } from "./manifest-read-CgWpVLT_.js";
+import { DoltClient, DoltQueryError, createDatabaseAdapter$1 as createDatabaseAdapter, getLatestRun, getPipelineRunById, initSchema } from "./dist-CW4d4JMj.js";
+import { resolveMainRepoRoot, resolveRunManifest } from "./manifest-read-DwpffChw.js";
 import { createRequire } from "module";
 import { dirname, join } from "path";
 import { existsSync, readFileSync } from "node:fs";
@@ -1000,4 +1000,4 @@ function registerHealthCommand(program, _version = "0.0.0", projectRoot = proces
 
 //#endregion
 export { BMAD_BASELINE_TOKENS_FULL, DEFAULT_STALL_THRESHOLD_SECONDS, FileKvStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter$1 as createDatabaseAdapter, createDoltOperatorReader, findPackageRoot, formatOutput, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, inspectProcessTree, isOrchestratorProcessLine, parseDbTimestampAsUtc, registerHealthCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, runHealthAction, validateStoryKey };
-//# sourceMappingURL=health-BZsEyfqX.js.map
+//# sourceMappingURL=health-DI5inO7P.js.map

package/dist/index.js

@@ -1,8 +1,8 @@
 import { childLogger, createLogger, logger } from "./logger-KeHncl-f.js";
 import { assertDefined, createEventBus, createTuiApp, deepClone, formatDuration, generateId, isPlainObject, isTuiCapable, printNonTtyWarning, sleep, withRetry } from "./helpers-CElYrONe.js";
-import { AdapterRegistry, AdtError, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, GeminiCLIAdapter } from "./dist-NCtAx8Xo.js";
+import { AdapterRegistry, AdtError, ClaudeCodeAdapter, CodexCLIAdapter, ConfigError, ConfigIncompatibleFormatError, GeminiCLIAdapter } from "./dist-CW4d4JMj.js";
 import "./adapter-registry-DIcrxjH8.js";
-import { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError } from "./errors-CbWCo0EG.js";
+import { BudgetExceededError, GitError, RecoveryError, TaskConfigError, TaskGraphCycleError, TaskGraphError, TaskGraphIncompatibleFormatError, WorkerError, WorkerNotFoundError } from "./errors-Da7Izmsw.js";
 
 //#region src/core/di.ts
 /**

package/dist/{interactive-prompt-DGRuUc6E.js → interactive-prompt-Cpke493f.js}

@@ -1,5 +1,5 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { readCurrentRunId, resolveMainRepoRoot } from "./manifest-read-CgWpVLT_.js";
+import { readCurrentRunId, resolveMainRepoRoot } from "./manifest-read-DwpffChw.js";
 import { join } from "node:path";
 import { mkdir, readFile, writeFile } from "node:fs/promises";
 import * as readline from "node:readline";
@@ -180,4 +180,4 @@ async function runInteractivePrompt(decisionContext) {
 
 //#endregion
 export { runInteractivePrompt };
-//# sourceMappingURL=interactive-prompt-DGRuUc6E.js.map
+//# sourceMappingURL=interactive-prompt-Cpke493f.js.map

package/dist/{manifest-read-CgWpVLT_.js → manifest-read-DwpffChw.js}

@@ -1,5 +1,5 @@
 import { createLogger } from "./logger-KeHncl-f.js";
-import { LEARNING_FINDING, createDecision, getDecisionsByCategory } from "./dist-NCtAx8Xo.js";
+import { LEARNING_FINDING, createDecision, getDecisionsByCategory } from "./dist-CW4d4JMj.js";
 import * as path$1 from "path";
 import { join } from "path";
 import { readFile } from "fs/promises";
@@ -2868,7 +2868,7 @@ function probesInvokeProductionTrigger(probes) {
 	for (const probe of probes) for (const pattern of TRIGGER_COMMAND_PATTERNS) if (pattern.test(probe.command)) return true;
 	return false;
 }
-const defaultExecutors = { host: (probe) => executeProbeOnHost(probe, { cwd: process.cwd() }) };
+const defaultExecutors = { host: (probe, cwd) => executeProbeOnHost(probe, { cwd: cwd ?? process.cwd() }) };
 var RuntimeProbeCheck = class {
 	name = "runtime-probes";
 	tier = "A";
@@ -2953,7 +2953,7 @@ var RuntimeProbeCheck = class {
 				});
 				continue;
 			}
-			const result = await this._executors.host(probe);
+			const result = await this._executors.host(probe, context.workingDir);
 			if (result.outcome === "pass") continue;
 			const descriptor = probe.description ? ` (${probe.description})` : "";
 			if (result.outcome === "timeout") {
@@ -5845,4 +5845,4 @@ async function resolveRunManifest(dbRoot, runId) {
 
 //#endregion
 export { FindingsInjector, RunManifest, RuntimeProbeListSchema, SupervisorLock, ZERO_FINDINGS_BY_AUTHOR, ZERO_FINDING_COUNTS, ZERO_PROBE_AUTHOR_METRICS, aggregateProbeAuthorMetrics, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, parseRuntimeProbes, readCurrentRunId, renderFindings, resolveGraphPath, resolveMainRepoRoot, resolveRunManifest, rollupFindingCounts, rollupFindingsByAuthor, rollupProbeAuthorByClass, rollupProbeAuthorMetrics, runAcTraceabilityCheck, runStaleVerificationRecovery };
-//# sourceMappingURL=manifest-read-CgWpVLT_.js.map
+//# sourceMappingURL=manifest-read-DwpffChw.js.map

package/dist/modules/interactive-prompt/index.js

@@ -1,6 +1,6 @@
 import "../../logger-KeHncl-f.js";
-import "../../dist-NCtAx8Xo.js";
-import "../../manifest-read-CgWpVLT_.js";
-import { runInteractivePrompt } from "../../interactive-prompt-DGRuUc6E.js";
+import "../../dist-CW4d4JMj.js";
+import "../../manifest-read-DwpffChw.js";
+import { runInteractivePrompt } from "../../interactive-prompt-Cpke493f.js";
 
 export { runInteractivePrompt };

package/dist/{routing-Dnm12Fum.js → routing-BiT4IXk2.js}

@@ -1,4 +1,4 @@
-import { ModelRoutingConfigSchema, ProviderPolicySchema, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, TASK_TYPE_PHASE_MAP, getModelTier, loadModelRoutingConfig } from "./dist-NCtAx8Xo.js";
+import { ModelRoutingConfigSchema, ProviderPolicySchema, RoutingConfigError, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, TASK_TYPE_PHASE_MAP, getModelTier, loadModelRoutingConfig } from "./dist-CW4d4JMj.js";
 import "./routing-DFxoKHDt.js";
 
 export { loadModelRoutingConfig };

package/dist/{run-B7lFIS08.js → run-9ngj072m.js}

@@ -1,14 +1,14 @@
-import "./health-BZsEyfqX.js";
+import "./health-DI5inO7P.js";
 import "./logger-KeHncl-f.js";
 import "./helpers-CElYrONe.js";
-import "./dist-NCtAx8Xo.js";
-import { normalizeGraphSummaryToStatus, registerRunCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, runRunAction, wireNdjsonEmitter } from "./run-DKVXaIgo.js";
-import "./manifest-read-CgWpVLT_.js";
+import "./dist-CW4d4JMj.js";
+import { normalizeGraphSummaryToStatus, registerRunCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, runRunAction, wireNdjsonEmitter } from "./run-D1MuG0x6.js";
+import "./manifest-read-DwpffChw.js";
 import "./routing-DFxoKHDt.js";
 import "./work-graph-repository-DZyJv5pV.js";
 import "./decisions-CzSIEeGP.js";
 import "./decision-router-DblHY8se.js";
-import "./interactive-prompt-DGRuUc6E.js";
+import "./interactive-prompt-Cpke493f.js";
 import "./recovery-engine-BKGBeBnW.js";
 
 export { runRunAction };

package/dist/{run-DKVXaIgo.js → run-D1MuG0x6.js}

@@ -1,11 +1,11 @@
-import { BMAD_BASELINE_TOKENS_FULL, FileKvStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter, formatOutput, formatPipelineSummary, formatTokenTelemetry, inspectProcessTree, parseDbTimestampAsUtc, validateStoryKey } from "./health-BZsEyfqX.js";
+import { BMAD_BASELINE_TOKENS_FULL, FileKvStore, STOP_AFTER_VALID_PHASES, STORY_KEY_PATTERN, VALID_PHASES, __commonJS, __require, __toESM, buildPipelineStatusOutput, createDatabaseAdapter, formatOutput, formatPipelineSummary, formatTokenTelemetry, inspectProcessTree, parseDbTimestampAsUtc, validateStoryKey } from "./health-DI5inO7P.js";
 import { createLogger } from "./logger-KeHncl-f.js";
 import { TypedEventBusImpl, createEventBus, createTuiApp, isTuiCapable, printNonTtyWarning, sleep } from "./helpers-CElYrONe.js";
-import { ADVISORY_NOTES, Categorizer, ConsumerAnalyzer, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, IngestionServer, LogTurnAnalyzer, OPERATIONAL_FINDING, Recommender, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, callLLM, classifyVersionGap, createConfigSystem, createDatabaseAdapter$1, createDecision, createPipelineRun, createRequirement, createStderrLogger, detectInterfaceChanges, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunMetrics, getRunningPipelineRuns, getStoryMetricsForRun, getTokenUsageSummary, initSchema, listRequirements, loadModelRoutingConfig, registerArtifact, swallowDebug, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics } from "./dist-NCtAx8Xo.js";
-import { FindingsInjector, RunManifest, RuntimeProbeListSchema, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, renderFindings, resolveGraphPath, resolveMainRepoRoot, runAcTraceabilityCheck, runStaleVerificationRecovery } from "./manifest-read-CgWpVLT_.js";
+import { ADVISORY_NOTES, Categorizer, ConsumerAnalyzer, DEFAULT_GLOBAL_SETTINGS, DispatcherImpl, DoltClient, ESCALATION_DIAGNOSIS, EXPERIMENT_RESULT, EfficiencyScorer, IngestionServer, LogTurnAnalyzer, OPERATIONAL_FINDING, Recommender, RoutingRecommender, RoutingResolver, RoutingTelemetry, RoutingTokenAccumulator, RoutingTuner, STORY_METRICS, STORY_OUTCOME, SubstrateConfigSchema, TEST_EXPANSION_FINDING, TEST_PLAN, TelemetryNormalizer, TelemetryPipeline, TurnAnalyzer, addTokenUsage, aggregateTokenUsageForRun, aggregateTokenUsageForStory, callLLM, classifyVersionGap, createConfigSystem, createDatabaseAdapter$1, createDecision, createPipelineRun, createRequirement, createStderrLogger, detectInterfaceChanges, getArtifactByTypeForRun, getArtifactsByRun, getDecisionsByCategory, getDecisionsByPhase, getDecisionsByPhaseForRun, getLatestRun, getPipelineRunById, getRunMetrics, getRunningPipelineRuns, getStoryMetricsForRun, getTokenUsageSummary, initSchema, listRequirements, loadModelRoutingConfig, registerArtifact, swallowDebug, updatePipelineRun, updatePipelineRunConfig, upsertDecision, writeRunMetrics, writeStoryMetrics } from "./dist-CW4d4JMj.js";
+import { FindingsInjector, RunManifest, RuntimeProbeListSchema, applyConfigToGraph, createDefaultVerificationPipeline, createGraphOrchestrator, createSdlcCodeReviewHandler, createSdlcCreateStoryHandler, createSdlcDevStoryHandler, createSdlcPhaseHandler, detectsEventDrivenAC, detectsStateIntegratingAC, extractTargetFilesFromStoryContent, renderFindings, resolveGraphPath, resolveMainRepoRoot, runAcTraceabilityCheck, runStaleVerificationRecovery } from "./manifest-read-DwpffChw.js";
 import { WorkGraphRepository, detectCycles } from "./work-graph-repository-DZyJv5pV.js";
 import { deriveExitCode, routeDecision } from "./decision-router-DblHY8se.js";
-import { runInteractivePrompt } from "./interactive-prompt-DGRuUc6E.js";
+import { runInteractivePrompt } from "./interactive-prompt-Cpke493f.js";
 import { runRecoveryEngine } from "./recovery-engine-BKGBeBnW.js";
 import { basename, dirname, extname, join } from "path";
 import { access, readFile, readdir, stat } from "fs/promises";
@@ -13223,6 +13223,7 @@ const TITLE_OVERLAP_WARNING_THRESHOLD = .3;
 const FIDELITY_DRIFT_THRESHOLD = .5;
 const MIN_NAMED_PATHS_FOR_FIDELITY_GATE = 3;
 const MAX_FIDELITY_RETRIES = 2;
+const CHECKPOINT_RETRY_TIMEOUT_MS = 27e5;
 /**
 * Map a terminal StoryPhase to the corresponding PerStoryStatus for run-manifest writes.
 * Returns 'dispatched' for in-progress phases (used as a safe default).
@@ -14911,6 +14912,7 @@ function createImplementationOrchestrator(deps) {
 						prompt: checkpointRetryPrompt,
 						agent: deps.agentId ?? "claude-code",
 						taskType: "dev-story",
+						timeout: CHECKPOINT_RETRY_TIMEOUT_MS,
 						outputSchema: DevStoryResultSchema,
 						...checkpointRetryMaxTurns !== void 0 ? { maxTurns: checkpointRetryMaxTurns } : {},
 						...effectiveProjectRoot !== void 0 ? { workingDirectory: effectiveProjectRoot } : {},
@@ -46998,7 +47000,7 @@ async function runFullPipeline(options) {
 */
 async function emitPreDispatchVersionAdvisory(currentVersion) {
 	if (process.env["SUBSTRATE_NO_UPDATE_CHECK"] === "1") return;
-	const { createVersionManager } = await import("./version-manager-impl-NE_GqZQu.js");
+	const { createVersionManager } = await import("./version-manager-impl-G82XqDMV.js");
 	const vm = createVersionManager();
 	const result = await vm.checkForUpdates(true);
 	const gap = classifyVersionGap(currentVersion, result.latestVersion);
@@ -47095,4 +47097,4 @@ function registerRunCommand(program, version = "0.0.0", projectRoot = process.cw
 
 //#endregion
 export { AdapterTelemetryPersistence, AppError, DoltRepoMapMetaRepository, DoltSymbolRepository, ERR_REPO_MAP_STORAGE_WRITE, EpicIngester, GLOBSTAR$1 as GLOBSTAR, GitClient, GrammarLoader, Minimatch$1 as Minimatch, Minipass, RepoMapInjector, RepoMapModule, RepoMapQueryEngine, RepoMapStorage, SymbolParser, createContextCompiler, createDispatcher, createEventEmitter, createGitWorktreeManager, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, createTelemetryAdvisor, escape$1 as escape, formatPhaseCompletionSummary, getFactoryRunSummaries, getScenarioResultsForRun, getTwinRunsForRun, listGraphRuns, normalizeGraphSummaryToStatus, registerExportCommand, registerFactoryCommand, registerRunCommand, registerScenariosCommand, resolveMaxReviewCycles, resolveProbeAuthorStateIntegrating, resolveStoryKeys, runAnalysisPhase, runPlanningPhase, runProbeAuthor, runRunAction, runSolutioningPhase, unescape$1 as unescape, validateStopAfterFromConflict, wireNdjsonEmitter };
-//# sourceMappingURL=run-DKVXaIgo.js.map
+//# sourceMappingURL=run-D1MuG0x6.js.map

package/dist/{upgrade-DPg4GENq.js → upgrade-BciwetMn.js}

@@ -1,5 +1,5 @@
-import "./dist-NCtAx8Xo.js";
+import "./dist-CW4d4JMj.js";
 import "./version-manager-impl-qFBiO4Eh.js";
-import { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand } from "./upgrade-f-U437AC.js";
+import { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand } from "./upgrade-W9n0n39E.js";
 
 export { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand };

package/dist/{upgrade-f-U437AC.js → upgrade-W9n0n39E.js}

@@ -1,4 +1,4 @@
-import { createVersionManager } from "./dist-NCtAx8Xo.js";
+import { createVersionManager } from "./dist-CW4d4JMj.js";
 import { execSync, spawn } from "child_process";
 import * as readline from "readline";
 
@@ -123,4 +123,4 @@ function registerUpgradeCommand(program) {
 
 //#endregion
 export { isGlobalInstall, registerUpgradeCommand, runUpgradeCommand };
-//# sourceMappingURL=upgrade-f-U437AC.js.map
+//# sourceMappingURL=upgrade-W9n0n39E.js.map

package/dist/{version-manager-impl-NE_GqZQu.js → version-manager-impl-G82XqDMV.js}

@@ -1,4 +1,4 @@
-import { VersionManagerImpl, createVersionManager } from "./dist-NCtAx8Xo.js";
+import { VersionManagerImpl, createVersionManager } from "./dist-CW4d4JMj.js";
 import "./version-manager-impl-qFBiO4Eh.js";
 
 export { createVersionManager };

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "substrate-ai",
-  "version": "0.20.112",
+  "version": "0.20.114",
   "description": "Substrate — multi-agent orchestration daemon for AI coding agents",
   "type": "module",
   "license": "MIT",

package/dist/adapter-registry-MDBNDWLV.js

@@ -1,4 +0,0 @@
-import { AdapterRegistry } from "./dist-NCtAx8Xo.js";
-import "./adapter-registry-DIcrxjH8.js";
-
-export { AdapterRegistry };