substrate-ai 0.2.31 → 0.2.33

package/dist/cli/index.js

@@ -1,5 +1,5 @@
 #!/usr/bin/env node
-import { DEFAULT_CONFIG, DEFAULT_ROUTING_POLICY, DatabaseWrapper, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createConfigSystem, createContextCompiler, createDispatcher, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, findPackageRoot, formatOutput, formatPhaseCompletionSummary, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, parseDbTimestampAsUtc, registerHealthCommand, registerRunCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, resolveMainRepoRoot, runAnalysisPhase, runMigrations, runPlanningPhase, runSolutioningPhase, validateStopAfterFromConflict } from "../run-BxXwD2xY.js";
+import { DEFAULT_CONFIG, DEFAULT_ROUTING_POLICY, DatabaseWrapper, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createConfigSystem, createContextCompiler, createDispatcher, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, findPackageRoot, formatOutput, formatPhaseCompletionSummary, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, parseDbTimestampAsUtc, registerHealthCommand, registerRunCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, resolveMainRepoRoot, runAnalysisPhase, runMigrations, runPlanningPhase, runSolutioningPhase, validateStopAfterFromConflict } from "../run-XNRFAHEx.js";
 import { createLogger } from "../logger-D2fS2ccL.js";
 import { AdapterRegistry } from "../adapter-registry-PsWhP_1Q.js";
 import { CURRENT_CONFIG_FORMAT_VERSION, CURRENT_TASK_GRAPH_VERSION, PartialSubstrateConfigSchema } from "../config-migrator-DSi8KhQC.js";
@@ -1336,8 +1336,8 @@ async function runStatusAction(options) {
 			});
 			let pipelineWallClockMs = 0;
 			try {
-				const createdAt = parseDbTimestampAsUtc(run.created_at);
-				const endTimestamp = run.status === "running" ? new Date() : parseDbTimestampAsUtc(run.updated_at);
+				const createdAt = parseDbTimestampAsUtc(run.created_at ?? "");
+				const endTimestamp = run.status === "running" ? new Date() : parseDbTimestampAsUtc(run.updated_at ?? "");
 				pipelineWallClockMs = Math.max(0, endTimestamp.getTime() - createdAt.getTime());
 			} catch {}
 			const totalReviewCycles = storyMetricsRows.reduce((sum, r) => sum + (r.review_cycles ?? 0), 0);
@@ -2158,7 +2158,7 @@ function defaultSupervisorDeps() {
 						const dbPath = join(dbRoot, ".substrate", "substrate.db");
 						cachedDbWrapper = new DatabaseWrapper(dbPath);
 					}
-					incrementRunRestarts(cachedDbWrapper.getDb(), runId);
+					incrementRunRestarts(cachedDbWrapper.db, runId);
 				} catch {
 					try {
 						cachedDbWrapper?.close();
@@ -2585,7 +2585,7 @@ async function runSupervisorAction(options, deps = {}) {
 								const expDb = expDbWrapper.db;
 								const { runRunAction: runPipeline } = await import(
 									/* @vite-ignore */
-									"../run-CMagiY2Y.js"
+									"../run-Cd7sfXzo.js"
 );
 								const runStoryFn = async (opts) => {
 									const exitCode = await runPipeline({
@@ -2596,7 +2596,7 @@ async function runSupervisorAction(options, deps = {}) {
 										projectRoot: opts.projectRoot
 									});
 									const latestRun = getLatest(expDb);
-									const newRunId = latestRun?.run_id ?? `experiment-${Date.now()}`;
+									const newRunId = latestRun?.id ?? `experiment-${Date.now()}`;
 									return {
 										runId: newRunId,
 										exitCode

package/dist/{run-CMagiY2Y.js → run-Cd7sfXzo.js}

@@ -1,4 +1,4 @@
-import { registerRunCommand, runRunAction } from "./run-BxXwD2xY.js";
+import { registerRunCommand, runRunAction } from "./run-XNRFAHEx.js";
 import "./logger-D2fS2ccL.js";
 import "./config-migrator-DSi8KhQC.js";
 import "./helpers-RL22dYtn.js";

package/dist/{run-BxXwD2xY.js → run-XNRFAHEx.js}

@@ -971,6 +971,7 @@ function countWords(text) {
 }
 /** Default descriptions of what each phase produces for the next phase */
 const NEXT_PHASE_DESCRIPTIONS = {
+	research: "Analysis will consume the research findings to evaluate the product concept.",
 	analysis: "Planning will consume the product brief to define requirements and user stories.",
 	planning: "Solutioning will consume the requirements and user stories to design the technical architecture.",
 	solutioning: "Implementation will consume the architecture decisions and story definitions to build the solution.",
@@ -1326,9 +1327,9 @@ function buildPipelineStatusOutput(run, tokenSummary, decisionsCount, storiesCou
 		decisions_count: decisionsCount,
 		stories_count: derivedStoriesCount,
 		stories_completed: derivedStoriesCompleted,
-		last_activity: run.updated_at,
-		staleness_seconds: Math.round((Date.now() - parseDbTimestampAsUtc(run.updated_at).getTime()) / 1e3),
-		last_event_ts: run.updated_at,
+		last_activity: run.updated_at ?? "",
+		staleness_seconds: Math.round((Date.now() - parseDbTimestampAsUtc(run.updated_at ?? "").getTime()) / 1e3),
+		last_event_ts: run.updated_at ?? "",
 		active_dispatches: activeDispatches,
 		...storiesSummary !== void 0 ? { stories: storiesSummary } : {}
 	};
@@ -3555,7 +3556,7 @@ var DispatcherImpl = class {
 	}
 	dispatch(request) {
 		if (this._shuttingDown) {
-			const handle$1 = new MutableDispatchHandle(randomUUID(), "failed", async () => {});
+			const handle$1 = new MutableDispatchHandle(randomUUID(), "queued", async () => {});
 			handle$1.status = "failed";
 			return Object.assign(handle$1, { result: Promise.reject(new DispatcherShuttingDownError()) });
 		}
@@ -3966,24 +3967,21 @@ var DispatcherImpl = class {
 		}
 	}
 };
-/** Default command for the build verification gate */
-const DEFAULT_VERIFY_COMMAND = "npm run build";
 /**
-* Detect the package manager used in a project by checking for lockfiles.
+* Detect the package manager / build system used in a project.
 *
-* Priority order (checked in sequence):
-*   pnpm-lock.yaml → pnpm run build
-*   yarn.lock      → yarn run build
-*   bun.lockb      → bun run build
-*   package-lock.json → npm run build
-*   (none found)   → npm run build  (fallback, matches DEFAULT_VERIFY_COMMAND)
+* Checks for language-specific markers in priority order:
+*   1. Node.js lockfiles → corresponding `<pm> run build`
+*   2. Python markers (pyproject.toml, poetry.lock, setup.py) → skip (no universal build step)
+*   3. Rust (Cargo.toml) → cargo build
+*   4. Go (go.mod) → go build ./...
+*   5. No markers found → skip (empty command)
 *
-* Lockfile presence is used rather than the `packageManager` field in
-* package.json because lockfiles are more reliable and always present in
-* real projects.
+* When a non-Node.js project is detected (or nothing is recognized), the
+* returned command is '' which causes runBuildVerification() to skip.
 */
 function detectPackageManager(projectRoot) {
-	const candidates = [
+	const nodeCandidates = [
 		{
 			file: "pnpm-lock.yaml",
 			packageManager: "pnpm",
@@ -4005,15 +4003,27 @@ function detectPackageManager(projectRoot) {
 			command: "npm run build"
 		}
 	];
-	for (const candidate of candidates) if (existsSync$1(join$1(projectRoot, candidate.file))) return {
+	const nonNodeMarkers = [
+		"pyproject.toml",
+		"poetry.lock",
+		"setup.py",
+		"Cargo.toml",
+		"go.mod"
+	];
+	for (const marker of nonNodeMarkers) if (existsSync$1(join$1(projectRoot, marker))) return {
+		packageManager: "none",
+		lockfile: marker,
+		command: ""
+	};
+	for (const candidate of nodeCandidates) if (existsSync$1(join$1(projectRoot, candidate.file))) return {
 		packageManager: candidate.packageManager,
 		lockfile: candidate.file,
 		command: candidate.command
 	};
 	return {
-		packageManager: "npm",
+		packageManager: "none",
 		lockfile: null,
-		command: DEFAULT_VERIFY_COMMAND
+		command: ""
 	};
 }
 /** Default timeout in milliseconds for the build verification gate */
@@ -4554,11 +4564,11 @@ const TestExpansionResultSchema = z.object({
 * These match the hardcoded constants previously defined inline in each workflow.
 */
 const TOKEN_CEILING_DEFAULTS = {
-	"create-story": 3e3,
-	"dev-story": 24e3,
+	"create-story": 1e4,
+	"dev-story": 8e4,
 	"code-review": 1e5,
-	"test-plan": 8e3,
-	"test-expansion": 2e4
+	"test-plan": 2e4,
+	"test-expansion": 4e4
 };
 /**
 * Resolve the effective token ceiling for a workflow type.
@@ -7085,7 +7095,7 @@ async function getAutoHealthData(options) {
 		if (runId !== void 0) run = getPipelineRunById(db, runId);
 		else run = getLatestRun(db);
 		if (run === void 0) return NO_PIPELINE;
-		const updatedAt = parseDbTimestampAsUtc(run.updated_at);
+		const updatedAt = parseDbTimestampAsUtc(run.updated_at ?? "");
 		const stalenessSeconds = Math.round((Date.now() - updatedAt.getTime()) / 1e3);
 		let storyDetails = {};
 		let active = 0;
@@ -7123,9 +7133,9 @@ async function getAutoHealthData(options) {
 			verdict,
 			run_id: run.id,
 			status: run.status,
-			current_phase: run.current_phase,
+			current_phase: run.current_phase ?? null,
 			staleness_seconds: stalenessSeconds,
-			last_activity: run.updated_at,
+			last_activity: run.updated_at ?? "",
 			process: processInfo,
 			stories: {
 				active,
@@ -8059,7 +8069,7 @@ function createImplementationOrchestrator(deps) {
 				token_usage_json: serialized
 			});
 		} catch (err) {
-			logger$23.warn("Failed to persist orchestrator state", { err });
+			logger$23.warn({ err }, "Failed to persist orchestrator state");
 		}
 	}
 	function recordProgress() {
@@ -8180,7 +8190,7 @@ function createImplementationOrchestrator(deps) {
 	* exhausted retries the story is ESCALATED.
 	*/
 	async function processStory(storyKey) {
-		logger$23.info("Processing story", { storyKey });
+		logger$23.info({ storyKey }, "Processing story");
 		{
 			const memoryOk = await checkMemoryPressure(storyKey);
 			if (!memoryOk) {
@@ -8363,7 +8373,7 @@ function createImplementationOrchestrator(deps) {
 			}, {
 				storyKey,
 				storyFilePath: storyFilePath ?? "",
-				pipelineRunId: config.pipelineRunId
+				pipelineRunId: config.pipelineRunId ?? ""
 			});
 			testPlanPhaseResult = testPlanResult.result;
 			if (testPlanResult.result === "success") logger$23.info({ storyKey }, "Test plan generated successfully");
@@ -8528,11 +8538,11 @@ function createImplementationOrchestrator(deps) {
 				});
 				persistState();
 				if (devResult.result === "success") devStoryWasSuccess = true;
-				else logger$23.warn("Dev-story reported failure, proceeding to code review", {
+				else logger$23.warn({
 					storyKey,
 					error: devResult.error,
 					filesModified: devFilesModified.length
-				});
+				}, "Dev-story reported failure, proceeding to code review");
 			}
 		} catch (err) {
 			const errMsg = err instanceof Error ? err.message : String(err);
@@ -8580,7 +8590,7 @@ function createImplementationOrchestrator(deps) {
 		}
 		endPhase(storyKey, "dev-story");
 		{
-			const buildVerifyResult = runBuildVerification({
+			const buildVerifyResult = config.skipBuildVerify === true ? { status: "skipped" } : runBuildVerification({
 				verifyCommand: pack.manifest.verifyCommand,
 				verifyTimeoutMs: pack.manifest.verifyTimeoutMs,
 				projectRoot: projectRoot ?? process.cwd()
@@ -8954,7 +8964,7 @@ function createImplementationOrchestrator(deps) {
 						fixPrompt = assembled.prompt;
 					} catch {
 						fixPrompt = `Fix story ${storyKey}: verdict=${verdict}, minor fixes needed`;
-						logger$23.warn("Failed to assemble auto-approve fix prompt, using fallback", { storyKey });
+						logger$23.warn({ storyKey }, "Failed to assemble auto-approve fix prompt, using fallback");
 					}
 					const handle = dispatcher.dispatch({
 						prompt: fixPrompt,
@@ -8972,12 +8982,12 @@ function createImplementationOrchestrator(deps) {
 							output: fixResult.tokenEstimate.output
 						} : void 0 }
 					});
-					if (fixResult.status === "timeout") logger$23.warn("Auto-approve fix timed out — approving anyway (issues were minor)", { storyKey });
+					if (fixResult.status === "timeout") logger$23.warn({ storyKey }, "Auto-approve fix timed out — approving anyway (issues were minor)");
 				} catch (err) {
-					logger$23.warn("Auto-approve fix dispatch failed — approving anyway (issues were minor)", {
+					logger$23.warn({
 						storyKey,
 						err
-					});
+					}, "Auto-approve fix dispatch failed — approving anyway (issues were minor)");
 				}
 				endPhase(storyKey, "code-review");
 				updateStory(storyKey, {
@@ -9091,10 +9101,10 @@ function createImplementationOrchestrator(deps) {
 					fixPrompt = assembled.prompt;
 				} catch {
 					fixPrompt = `Fix story ${storyKey}: verdict=${verdict}, taskType=${taskType}`;
-					logger$23.warn("Failed to assemble fix prompt, using fallback", {
+					logger$23.warn({
 						storyKey,
 						taskType
-					});
+					}, "Failed to assemble fix prompt, using fallback");
 				}
 				incrementDispatches(storyKey);
 				const handle = isMajorRework ? dispatcher.dispatch({
@@ -9123,10 +9133,10 @@ function createImplementationOrchestrator(deps) {
 					} : void 0 }
 				});
 				if (fixResult.status === "timeout") {
-					logger$23.warn("Fix dispatch timed out — escalating story", {
+					logger$23.warn({
 						storyKey,
 						taskType
-					});
+					}, "Fix dispatch timed out — escalating story");
 					endPhase(storyKey, "code-review");
 					updateStory(storyKey, {
 						phase: "ESCALATED",
@@ -9145,10 +9155,10 @@ function createImplementationOrchestrator(deps) {
 				}
 				if (fixResult.status === "failed") {
 					if (isMajorRework) {
-						logger$23.warn("Major rework dispatch failed — escalating story", {
+						logger$23.warn({
 							storyKey,
 							exitCode: fixResult.exitCode
-						});
+						}, "Major rework dispatch failed — escalating story");
 						endPhase(storyKey, "code-review");
 						updateStory(storyKey, {
 							phase: "ESCALATED",
@@ -9165,18 +9175,18 @@ function createImplementationOrchestrator(deps) {
 						persistState();
 						return;
 					}
-					logger$23.warn("Fix dispatch failed", {
+					logger$23.warn({
 						storyKey,
 						taskType,
 						exitCode: fixResult.exitCode
-					});
+					}, "Fix dispatch failed");
 				}
 			} catch (err) {
-				logger$23.warn("Fix dispatch failed, continuing to next review", {
+				logger$23.warn({
 					storyKey,
 					taskType,
 					err
-				});
+				}, "Fix dispatch failed, continuing to next review");
 			}
 			previousIssueList = issueList.map((issue) => {
 				const iss = issue;
@@ -9235,11 +9245,11 @@ function createImplementationOrchestrator(deps) {
 	}
 	async function run(storyKeys) {
 		if (_state === "RUNNING" || _state === "PAUSED") {
-			logger$23.warn("run() called while orchestrator is already running or paused — ignoring", { state: _state });
+			logger$23.warn({ state: _state }, "run() called while orchestrator is already running or paused — ignoring");
 			return getStatus();
 		}
 		if (_state === "COMPLETE") {
-			logger$23.warn("run() called on a COMPLETE orchestrator — ignoring", { state: _state });
+			logger$23.warn({ state: _state }, "run() called on a COMPLETE orchestrator — ignoring");
 			return getStatus();
 		}
 		_state = "RUNNING";
@@ -9287,12 +9297,12 @@ function createImplementationOrchestrator(deps) {
 			contractEdges,
 			edgeCount: contractEdges.length
 		}, "Contract dependency edges detected — applying contract-aware dispatch ordering");
-		logger$23.info("Orchestrator starting", {
+		logger$23.info({
 			storyCount: storyKeys.length,
 			groupCount: batches.reduce((sum, b) => sum + b.length, 0),
 			batchCount: batches.length,
 			maxConcurrency: config.maxConcurrency
-		});
+		}, "Orchestrator starting");
 		if (config.skipPreflight !== true) {
 			const preFlightResult = runBuildVerification({
 				verifyCommand: pack.manifest.verifyCommand,
@@ -9325,7 +9335,7 @@ function createImplementationOrchestrator(deps) {
 			_state = "FAILED";
 			_completedAt = new Date().toISOString();
 			persistState();
-			logger$23.error("Orchestrator failed with unhandled error", { err });
+			logger$23.error({ err }, "Orchestrator failed with unhandled error");
 			return getStatus();
 		}
 		stopHeartbeat();
@@ -9467,15 +9477,14 @@ function collectExistingStoryKeys(projectRoot) {
 	if (!existsSync$1(artifactsDir)) return existing;
 	let entries;
 	try {
-		entries = readdirSync$1(artifactsDir);
+		entries = readdirSync$1(artifactsDir, { encoding: "utf-8" });
 	} catch {
 		return existing;
 	}
 	const filePattern = /^(\d+-\d+)-/;
 	for (const entry of entries) {
-		const name = typeof entry === "string" ? entry : entry.name;
-		if (!name.endsWith(".md")) continue;
-		const m = filePattern.exec(name);
+		if (!entry.endsWith(".md")) continue;
+		const m = filePattern.exec(entry);
 		if (m !== null && m[1] !== void 0) existing.add(m[1]);
 	}
 	return existing;
@@ -13941,7 +13950,7 @@ async function runRunAction(options) {
 		else failedKeys.push(key);
 		try {
 			const runEndMs = Date.now();
-			const runStartMs = parseDbTimestampAsUtc(pipelineRun.created_at).getTime();
+			const runStartMs = parseDbTimestampAsUtc(pipelineRun.created_at ?? "").getTime();
 			const tokenAgg = aggregateTokenUsageForRun(db, pipelineRun.id);
 			const storyMetrics = getStoryMetricsForRun(db, pipelineRun.id);
 			const totalReviewCycles = storyMetrics.reduce((sum, m) => sum + (m.review_cycles ?? 0), 0);
@@ -13950,7 +13959,7 @@ async function runRunAction(options) {
 				run_id: pipelineRun.id,
 				methodology: pack.manifest.name,
 				status: failedKeys.length > 0 || escalatedKeys.length > 0 ? "failed" : "completed",
-				started_at: pipelineRun.created_at,
+				started_at: pipelineRun.created_at ?? "",
 				completed_at: new Date().toISOString(),
 				wall_clock_seconds: Math.round((runEndMs - runStartMs) / 1e3),
 				total_input_tokens: tokenAgg.input,
@@ -14368,4 +14377,4 @@ function registerRunCommand(program, _version = "0.0.0", projectRoot = process.c
 
 //#endregion
 export { DEFAULT_CONFIG, DEFAULT_ROUTING_POLICY, DatabaseWrapper, SUBSTRATE_OWNED_SETTINGS_KEYS, VALID_PHASES, buildPipelineStatusOutput, createConfigSystem, createContextCompiler, createDispatcher, createImplementationOrchestrator, createPackLoader, createPhaseOrchestrator, createStopAfterGate, findPackageRoot, formatOutput, formatPhaseCompletionSummary, formatPipelineStatusHuman, formatPipelineSummary, formatTokenTelemetry, getAllDescendantPids, getAutoHealthData, getSubstrateDefaultSettings, parseDbTimestampAsUtc, registerHealthCommand, registerRunCommand, resolveBmadMethodSrcPath, resolveBmadMethodVersion, resolveMainRepoRoot, runAnalysisPhase, runMigrations, runPlanningPhase, runRunAction, runSolutioningPhase, validateStopAfterFromConflict };
-//# sourceMappingURL=run-BxXwD2xY.js.map
+//# sourceMappingURL=run-XNRFAHEx.js.map

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "substrate-ai",
-  "version": "0.2.31",
+  "version": "0.2.33",
   "description": "Substrate — multi-agent orchestration daemon for AI coding agents",
   "type": "module",
   "license": "MIT",
@@ -46,7 +46,9 @@
     "build": "tsdown",
     "postbuild": "cp -r src/cli/templates dist/cli/templates",
     "dev": "tsx watch src/cli/index.ts",
-    "test": "vitest run --coverage",
+    "test": "flock -n -E 75 /tmp/substrate-test.lock vitest run --coverage || { ec=$?; if [ $ec -eq 75 ]; then echo '⚠ Test suite already running — wait or kill the other process'; fi; exit $ec; }",
+    "test:fast": "vitest run --exclude 'src/__tests__/e2e/**' --exclude '**/*integration*' --exclude '**/*e2e*'",
+    "test:changed": "vitest run --changed",
     "test:watch": "vitest",
     "test:ui": "vitest --ui",
     "lint": "eslint src test",
@@ -54,6 +56,7 @@
     "format": "prettier --write \"src/**/*.ts\" \"test/**/*.ts\"",
     "format:check": "prettier --check \"src/**/*.ts\" \"test/**/*.ts\"",
     "typecheck": "tsc --noEmit",
+    "typecheck:gate": "tsc --noEmit -p tsconfig.typecheck.json",
     "clean": "rm -rf dist",
     "substrate:dev": "node dist/cli/index.js"
   },