studiograph 1.3.47 → 1.3.48-beta.0

package/dist/services/comment-service.js

@@ -0,0 +1,341 @@
+import Database from 'better-sqlite3';
+import { join } from 'node:path';
+import { existsSync, mkdirSync, chmodSync } from 'node:fs';
+import { randomBytes } from 'node:crypto';
+import { looksLikeCellAnchor, isValidCellAnchor } from '../core/cell-anchor.js';
+function generateCommentId() {
+    // 9 bytes → 12-char base64url ≈ 72 bits of entropy; collision risk negligible at any realistic scale.
+    return `cmt_${randomBytes(9).toString('base64url')}`;
+}
+/**
+ * Bump when columns are added/removed/renamed. The boot path runs every
+ * registered migration whose version is greater than the recorded
+ * `schema_version` in the meta table; pattern mirrors
+ * core/secrets/SqliteEncryptedStore.ts.
+ */
+const SCHEMA_VERSION = 1;
+/** Largest comment body the service will accept. Above this the route
+ *  returns 413 — Fastify bodyLimit is the outer 10MB wall, this is the
+ *  per-comment policy ceiling. */
+export const MAX_BODY_LENGTH = 8 * 1024;
+export const MAX_ANCHOR_RELPOS_LENGTH = 4 * 1024;
+/** Sentinel author_user_id used for agent-authored comments. The auth.db
+ *  users table is AUTOINCREMENT (starts at 1), so id=0 can never collide
+ *  with a real user. */
+export const AGENT_AUTHOR_USER_ID = 0;
+/** Thrown by create() when body or anchor_relpos exceeds the ceiling. */
+export class CommentTooLargeError extends Error {
+    constructor(message) {
+        super(message);
+        this.name = 'CommentTooLargeError';
+    }
+}
+/** Thrown by create() when a cell (JSON) anchor is malformed, or when a JSON
+ *  cell anchor is attached to a non-dataset entry (markdown comments only ever
+ *  carry a base64 text relpos or a null entry-level anchor). The route maps it
+ *  to HTTP 400. */
+export class InvalidCellAnchorError extends Error {
+    constructor(message) {
+        super(message);
+        this.name = 'InvalidCellAnchorError';
+    }
+}
+export class CommentService {
+    db;
+    constructor(workspacePath) {
+        const sgDir = join(workspacePath, '.studiograph');
+        if (!existsSync(sgDir))
+            mkdirSync(sgDir, { recursive: true });
+        const dbPath = join(sgDir, 'comments.db');
+        this.db = new Database(dbPath);
+        if (process.platform !== 'win32') {
+            try {
+                chmodSync(dbPath, 0o600);
+            }
+            catch { /* non-fatal */ }
+        }
+        this.db.pragma('journal_mode = WAL');
+        this.db.exec(`
+      CREATE TABLE IF NOT EXISTS comments (
+        id INTEGER PRIMARY KEY AUTOINCREMENT,
+        comment_id TEXT UNIQUE NOT NULL,
+        repo TEXT NOT NULL,
+        entry_type TEXT NOT NULL,
+        entry_id TEXT NOT NULL,
+        thread_id TEXT NOT NULL,
+        parent_id TEXT,
+        author_user_id INTEGER NOT NULL,
+        author_display_name TEXT NOT NULL,
+        author_role TEXT NOT NULL DEFAULT 'user' CHECK(author_role IN ('user', 'agent')),
+        body TEXT NOT NULL,
+        anchor_relpos TEXT,
+        anchor_quote TEXT,
+        mentions TEXT NOT NULL DEFAULT '[]',
+        created_at TEXT NOT NULL DEFAULT (datetime('now')),
+        updated_at TEXT,
+        resolved_at TEXT,
+        resolved_by_user_id INTEGER,
+        edited INTEGER NOT NULL DEFAULT 0 CHECK(edited IN (0, 1)),
+        edit_history TEXT NOT NULL DEFAULT '[]',
+        deleted_at TEXT
+      )
+    `);
+        this.db.exec(`CREATE INDEX IF NOT EXISTS idx_comments_entry ON comments(repo, entry_type, entry_id, resolved_at)`);
+        this.db.exec(`CREATE INDEX IF NOT EXISTS idx_comments_thread ON comments(thread_id, created_at)`);
+        this.db.exec(`CREATE INDEX IF NOT EXISTS idx_comments_unresolved ON comments(resolved_at) WHERE resolved_at IS NULL`);
+        this.db.exec(`CREATE INDEX IF NOT EXISTS idx_comments_repo_unresolved ON comments(repo, entry_type, entry_id) WHERE resolved_at IS NULL AND deleted_at IS NULL`);
+        // Schema-version scaffold so future column changes (reactions, etc.)
+        // can run through an ALTER TABLE migration step instead of silently
+        // skipping on databases created against an older shape. Pattern
+        // mirrors core/secrets/SqliteEncryptedStore.ts.
+        this.db.exec(`
+      CREATE TABLE IF NOT EXISTS meta (
+        key TEXT PRIMARY KEY,
+        value TEXT NOT NULL
+      );
+    `);
+        this.runMigrations();
+    }
+    /**
+     * Idempotent: each migration step is guarded by the recorded
+     * `schema_version` in `meta`. Add a new branch when bumping
+     * `SCHEMA_VERSION`; never edit existing branches.
+     */
+    runMigrations() {
+        const row = this.db.prepare("SELECT value FROM meta WHERE key='schema_version'").get();
+        const current = row ? parseInt(row.value, 10) || 0 : 0;
+        if (current >= SCHEMA_VERSION)
+            return;
+        // Future migrations live here:
+        //   if (current < 2) { this.db.exec(`ALTER TABLE comments ADD COLUMN ...`); }
+        //   if (current < 3) { ... }
+        this.db.prepare('INSERT OR REPLACE INTO meta (key, value) VALUES (?, ?)').run('schema_version', String(SCHEMA_VERSION));
+    }
+    create(input) {
+        // Resource bounds — Fastify bodyLimit is 10MB, but comment bodies
+        // shouldn't approach that. A user with repo write access could
+        // otherwise balloon comments.db with a few well-crafted POSTs.
+        if (input.body.length > MAX_BODY_LENGTH) {
+            throw new CommentTooLargeError(`Comment body exceeds ${MAX_BODY_LENGTH} characters`);
+        }
+        if (input.anchorRelpos && input.anchorRelpos.length > MAX_ANCHOR_RELPOS_LENGTH) {
+            throw new CommentTooLargeError(`Anchor relpos exceeds ${MAX_ANCHOR_RELPOS_LENGTH} characters`);
+        }
+        // Cell (JSON) anchors are dataset-only. A markdown comment's anchor is a
+        // base64 relpos blob (never starts with '{'); only datasets carry the
+        // `{"kind":"cell",…}` shape, validated here so a malformed anchor can't
+        // land in the column and a JSON anchor can't reach the text resolver.
+        if (looksLikeCellAnchor(input.anchorRelpos)) {
+            if (input.entryType !== 'dataset') {
+                throw new InvalidCellAnchorError('Cell anchors are only valid on dataset entries');
+            }
+            let parsed;
+            try {
+                parsed = JSON.parse(input.anchorRelpos);
+            }
+            catch {
+                throw new InvalidCellAnchorError('Cell anchor is not valid JSON');
+            }
+            if (!isValidCellAnchor(parsed)) {
+                throw new InvalidCellAnchorError('Cell anchor is structurally invalid');
+            }
+        }
+        const anchorQuote = input.anchorQuote
+            ? (input.anchorQuote.length > 256 ? input.anchorQuote.slice(0, 256) : input.anchorQuote)
+            : null;
+        const insert = this.db.prepare(`
+      INSERT INTO comments
+        (comment_id, repo, entry_type, entry_id, thread_id, parent_id,
+         author_user_id, author_display_name, author_role, body,
+         anchor_relpos, anchor_quote, mentions)
+      VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+    `);
+        // Retry on UNIQUE collision. 72-bit IDs make collisions astronomically
+        // unlikely, but a sane caller shouldn't see HTTP 500 on the off-chance.
+        let commentId = '';
+        let lastErr = null;
+        for (let attempt = 0; attempt < 3; attempt++) {
+            commentId = generateCommentId();
+            const threadId = input.threadId ?? input.parentId ?? commentId;
+            try {
+                insert.run(commentId, input.repo, input.entryType, input.entryId, threadId, input.parentId ?? null, input.authorUserId, input.authorDisplayName, input.authorRole ?? 'user', input.body, input.anchorRelpos ?? null, anchorQuote, JSON.stringify(input.mentions ?? []));
+                lastErr = null;
+                break;
+            }
+            catch (err) {
+                const msg = err.message ?? '';
+                if (!msg.includes('UNIQUE constraint failed: comments.comment_id'))
+                    throw err;
+                lastErr = err;
+            }
+        }
+        if (lastErr)
+            throw lastErr;
+        return this.getById(commentId);
+    }
+    getById(commentId) {
+        const row = this.db.prepare(`
+      SELECT * FROM comments WHERE comment_id = ?
+    `).get(commentId);
+        return row ? this.toComment(row) : null;
+    }
+    /** Batch lookup used by the notifications route to enrich each notification
+     *  with its source comment's entry coords. Returns a map keyed by commentId
+     *  so callers can do a single pass. Missing ids are absent from the map. */
+    getByIds(commentIds) {
+        const out = new Map();
+        if (commentIds.length === 0)
+            return out;
+        const placeholders = commentIds.map(() => '?').join(',');
+        const rows = this.db.prepare(`SELECT * FROM comments WHERE comment_id IN (${placeholders})`).all(...commentIds);
+        for (const row of rows) {
+            const c = this.toComment(row);
+            out.set(c.commentId, c);
+        }
+        return out;
+    }
+    list(opts = {}) {
+        const where = [];
+        const args = [];
+        if (opts.repo) {
+            where.push('repo = ?');
+            args.push(opts.repo);
+        }
+        if (opts.entryType) {
+            where.push('entry_type = ?');
+            args.push(opts.entryType);
+        }
+        if (opts.entryId) {
+            where.push('entry_id = ?');
+            args.push(opts.entryId);
+        }
+        if (opts.resolved === false)
+            where.push('resolved_at IS NULL');
+        if (opts.resolved === true)
+            where.push('resolved_at IS NOT NULL');
+        if (!opts.includeDeleted)
+            where.push('deleted_at IS NULL');
+        const clause = where.length ? `WHERE ${where.join(' AND ')}` : '';
+        const limit = Math.min(opts.limit ?? 500, 2000);
+        const rows = this.db.prepare(`SELECT * FROM comments ${clause} ORDER BY thread_id, created_at LIMIT ?`).all(...args, limit);
+        return rows.map(r => this.toComment(r));
+    }
+    edit(commentId, body, editorUserId) {
+        // Wrap read-modify-write in a transaction so concurrent edits by the
+        // same author don't both build edit_history from the same pre-image
+        // and lose the first edit's snapshot.
+        const txn = this.db.transaction(() => {
+            const existing = this.getById(commentId);
+            if (!existing || existing.deletedAt)
+                return null;
+            if (existing.authorUserId !== editorUserId) {
+                throw new Error('Only the author can edit this comment');
+            }
+            const history = [...existing.editHistory, { at: existing.updatedAt ?? existing.createdAt, body: existing.body }];
+            this.db.prepare(`
+        UPDATE comments
+        SET body = ?, updated_at = datetime('now'), edited = 1, edit_history = ?
+        WHERE comment_id = ?
+      `).run(body, JSON.stringify(history), commentId);
+            return this.getById(commentId);
+        });
+        return txn();
+    }
+    resolve(commentId, resolverUserId) {
+        const existing = this.getById(commentId);
+        if (!existing || existing.deletedAt)
+            return null;
+        // Resolve the entire thread (Google Docs semantics — resolve from any reply).
+        // Scope the UPDATE to the same repo/entry the caller is acting on so a
+        // forged thread_id pointing at another folder can't cascade-resolve there.
+        this.db.prepare(`
+      UPDATE comments
+      SET resolved_at = datetime('now'), resolved_by_user_id = ?
+      WHERE thread_id = ?
+        AND repo = ? AND entry_type = ? AND entry_id = ?
+        AND resolved_at IS NULL
+    `).run(resolverUserId, existing.threadId, existing.repo, existing.entryType, existing.entryId);
+        return this.getById(commentId);
+    }
+    reopen(commentId) {
+        const existing = this.getById(commentId);
+        if (!existing || existing.deletedAt)
+            return null;
+        // Same repo/entry scoping as resolve(), plus a resolved_at guard so a
+        // concurrent resolve+reopen race can't clobber a freshly-resolved thread
+        // without us noticing.
+        this.db.prepare(`
+      UPDATE comments
+      SET resolved_at = NULL, resolved_by_user_id = NULL
+      WHERE thread_id = ?
+        AND repo = ? AND entry_type = ? AND entry_id = ?
+        AND resolved_at IS NOT NULL
+    `).run(existing.threadId, existing.repo, existing.entryType, existing.entryId);
+        return this.getById(commentId);
+    }
+    /** Soft-delete: keeps thread continuity, blanks the visible body but
+     *  preserves the original in edit_history so a future audit/restore
+     *  path has something to recover. */
+    softDelete(commentId, requesterUserId) {
+        // Atomic so the edit_history append + body blank happen together.
+        const txn = this.db.transaction(() => {
+            const existing = this.getById(commentId);
+            if (!existing)
+                return null;
+            if (existing.authorUserId !== requesterUserId) {
+                throw new Error('Only the author can delete this comment');
+            }
+            if (existing.deletedAt)
+                return existing;
+            const history = [
+                ...existing.editHistory,
+                { at: existing.updatedAt ?? existing.createdAt, body: existing.body },
+            ];
+            this.db.prepare(`
+        UPDATE comments
+        SET deleted_at = datetime('now'), body = '', edit_history = ?
+        WHERE comment_id = ?
+      `).run(JSON.stringify(history), commentId);
+            return this.getById(commentId);
+        });
+        return txn();
+    }
+    close() {
+        this.db.close();
+    }
+    toComment(row) {
+        let mentions = [];
+        try {
+            mentions = JSON.parse(row.mentions ?? '[]');
+        }
+        catch { /* default [] */ }
+        let editHistory = [];
+        try {
+            editHistory = JSON.parse(row.edit_history ?? '[]');
+        }
+        catch { /* default [] */ }
+        return {
+            commentId: row.comment_id,
+            repo: row.repo,
+            entryType: row.entry_type,
+            entryId: row.entry_id,
+            threadId: row.thread_id,
+            parentId: row.parent_id ?? null,
+            authorUserId: row.author_user_id,
+            authorDisplayName: row.author_display_name,
+            authorRole: row.author_role,
+            body: row.body,
+            anchorRelpos: row.anchor_relpos ?? null,
+            anchorQuote: row.anchor_quote ?? null,
+            mentions,
+            createdAt: row.created_at,
+            updatedAt: row.updated_at ?? null,
+            resolvedAt: row.resolved_at ?? null,
+            resolvedByUserId: row.resolved_by_user_id ?? null,
+            edited: row.edited === 1 ? 1 : 0,
+            editHistory,
+            deletedAt: row.deleted_at ?? null,
+        };
+    }
+}
+//# sourceMappingURL=comment-service.js.map

package/dist/services/comment-service.js.map

@@ -0,0 +1 @@
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package/dist/services/csv-service.d.ts

@@ -1,36 +1,41 @@
 /**
  * CSV Service
  *
- * Parses, stringifies, validates, and filters CSV data for dataset entities.
- * Uses csv-parse and csv-stringify for reliable CSV handling.
+ * Parses, stringifies, and filters CSV data for dataset entities.
+ * Conventional CSV: the header row is the column list, every cell is a
+ * string. There is no typed column schema — callers derive columns from the
+ * header. Uses csv-parse and csv-stringify for reliable CSV handling.
  */
-import type { ColumnDefinition, DatasetRow } from '../core/validation.js';
+import type { DatasetRow } from '../core/validation.js';
 export interface DatasetFilter {
-    [column: string]: string | number | boolean | {
-        gte?: any;
-        lte?: any;
+    [column: string]: string | {
+        gte?: string | number;
+        lte?: string | number;
         contains?: string;
     };
 }
 export declare class CSVService {
     /**
-     * Parse CSV text into typed rows using the declared schema.
-     * Returns an empty array for CSV with headers only (no data rows).
+     * Parse CSV text into string-keyed rows. The header row supplies the
+     * column names. Returns an empty array for empty CSV or header-only CSV.
      */
-    parseRows(csvText: string, schema: ColumnDefinition[]): DatasetRow[];
+    parseRows(csvText: string): DatasetRow[];
     /**
-     * Stringify rows back to CSV text (header row + data rows).
+     * Column names from the CSV header row. Empty array for empty CSV.
      */
-    stringifyRows(rows: DatasetRow[], schema: ColumnDefinition[]): string;
+    columns(csvText: string): string[];
     /**
-     * Validate and coerce a raw string record against the schema.
-     * Throws on missing required fields or type coercion failure.
+     * Stringify rows back to CSV text. `columns` fixes the column order and set;
+     * cells missing from a row serialize empty, keys not in `columns` are
+     * dropped. With `includeHeader: false` only the data rows are emitted (used
+     * to append rows after an existing body without rewriting it).
      */
-    validateRow(row: Record<string, string>, schema: ColumnDefinition[]): DatasetRow;
+    stringifyRows(rows: DatasetRow[], columns: string[], includeHeader?: boolean): string;
     /**
-     * Filter rows using a DatasetFilter.
-     * Supports equality, { gte, lte } for numbers/dates, { contains } for strings.
+     * Filter rows. Supports equality (`{ col: 'x' }`), substring
+     * (`{ col: { contains } }`), and range (`{ col: { gte, lte } }`). Range
+     * comparisons are numeric when both the cell and the bound parse as finite
+     * numbers, otherwise lexical — sensible defaults for an untyped CSV.
      */
     filterRows(rows: DatasetRow[], filter: DatasetFilter): DatasetRow[];
-    private coerceValue;
 }

package/dist/services/csv-service.js

@@ -1,66 +1,65 @@
 /**
  * CSV Service
  *
- * Parses, stringifies, validates, and filters CSV data for dataset entities.
- * Uses csv-parse and csv-stringify for reliable CSV handling.
+ * Parses, stringifies, and filters CSV data for dataset entities.
+ * Conventional CSV: the header row is the column list, every cell is a
+ * string. There is no typed column schema — callers derive columns from the
+ * header. Uses csv-parse and csv-stringify for reliable CSV handling.
  */
 import { parse } from 'csv-parse/sync';
 import { stringify } from 'csv-stringify/sync';
 export class CSVService {
     /**
-     * Parse CSV text into typed rows using the declared schema.
-     * Returns an empty array for CSV with headers only (no data rows).
+     * Parse CSV text into string-keyed rows. The header row supplies the
+     * column names. Returns an empty array for empty CSV or header-only CSV.
      */
-    parseRows(csvText, schema) {
+    parseRows(csvText) {
         const trimmed = csvText.trim();
         if (!trimmed) {
             return [];
         }
-        const records = parse(trimmed, {
+        return parse(trimmed, {
             columns: true,
             skip_empty_lines: true,
             trim: true,
         });
-        return records.map(record => this.validateRow(record, schema));
     }
     /**
-     * Stringify rows back to CSV text (header row + data rows).
+     * Column names from the CSV header row. Empty array for empty CSV.
      */
-    stringifyRows(rows, schema) {
-        const columns = schema.map(col => col.name);
-        if (rows.length === 0) {
-            return columns.join(',') + '\n';
+    columns(csvText) {
+        const trimmed = csvText.trim();
+        if (!trimmed) {
+            return [];
         }
-        return stringify(rows, {
-            header: true,
-            columns,
-            cast: {
-                boolean: (value) => String(value),
-            },
+        const header = parse(trimmed, {
+            columns: false,
+            skip_empty_lines: true,
+            trim: true,
+            to: 1,
         });
+        return header.length > 0 ? header[0] : [];
     }
     /**
-     * Validate and coerce a raw string record against the schema.
-     * Throws on missing required fields or type coercion failure.
+     * Stringify rows back to CSV text. `columns` fixes the column order and set;
+     * cells missing from a row serialize empty, keys not in `columns` are
+     * dropped. With `includeHeader: false` only the data rows are emitted (used
+     * to append rows after an existing body without rewriting it).
      */
-    validateRow(row, schema) {
-        const result = {};
-        for (const col of schema) {
-            const raw = row[col.name];
-            if (raw === undefined || raw === null || raw === '') {
-                if (col.required) {
-                    throw new Error(`Missing required field: ${col.name}`);
-                }
-                result[col.name] = null;
-                continue;
-            }
-            result[col.name] = this.coerceValue(raw, col);
+    stringifyRows(rows, columns, includeHeader = true) {
+        if (columns.length === 0) {
+            return '';
         }
-        return result;
+        if (rows.length === 0) {
+            return includeHeader ? columns.join(',') + '\n' : '';
+        }
+        return stringify(rows, { header: includeHeader, columns });
     }
     /**
-     * Filter rows using a DatasetFilter.
-     * Supports equality, { gte, lte } for numbers/dates, { contains } for strings.
+     * Filter rows. Supports equality (`{ col: 'x' }`), substring
+     * (`{ col: { contains } }`), and range (`{ col: { gte, lte } }`). Range
+     * comparisons are numeric when both the cell and the bound parse as finite
+     * numbers, otherwise lexical — sensible defaults for an untyped CSV.
      */
     filterRows(rows, filter) {
         return rows.filter(row => {
@@ -73,71 +72,35 @@ export class CSVService {
                             return false;
                         }
                     }
-                    if (gte !== undefined) {
-                        if (value === null || value === undefined)
-                            return false;
-                        if (typeof value === 'string' && typeof gte === 'string') {
-                            if (value < gte)
-                                return false;
-                        }
-                        else {
-                            if (value < gte)
-                                return false;
-                        }
-                    }
-                    if (lte !== undefined) {
-                        if (value === null || value === undefined)
-                            return false;
-                        if (typeof value === 'string' && typeof lte === 'string') {
-                            if (value > lte)
-                                return false;
-                        }
-                        else {
-                            if (value > lte)
-                                return false;
-                        }
+                    if (gte !== undefined && compareCell(value, gte) < 0) {
+                        return false;
                     }
-                }
-                else {
-                    // Equality check
-                    if (value !== condition) {
+                    if (lte !== undefined && compareCell(value, lte) > 0) {
                         return false;
                     }
                 }
+                else if (value !== condition) {
+                    return false;
+                }
             }
             return true;
         });
     }
-    coerceValue(raw, col) {
-        switch (col.type) {
-            case 'number': {
-                const n = Number(raw);
-                if (isNaN(n)) {
-                    throw new Error(`Invalid number value for column "${col.name}": ${raw}`);
-                }
-                return n;
-            }
-            case 'boolean': {
-                const lower = raw.toLowerCase();
-                if (lower === 'true' || lower === '1' || lower === 'yes')
-                    return true;
-                if (lower === 'false' || lower === '0' || lower === 'no')
-                    return false;
-                throw new Error(`Invalid boolean value for column "${col.name}": ${raw}`);
-            }
-            case 'date': {
-                // Store dates as ISO string; validate that the value is parseable
-                const d = new Date(raw);
-                if (isNaN(d.getTime())) {
-                    throw new Error(`Invalid date value for column "${col.name}": ${raw}`);
-                }
-                // Return the original date string (YYYY-MM-DD) rather than converting to full ISO
-                return raw;
-            }
-            case 'string':
-            default:
-                return raw;
-        }
+}
+/**
+ * Compare a CSV cell against a bound. Numeric when both sides parse as finite
+ * numbers, otherwise string comparison. Returns <0, 0, or >0; an
+ * absent/undefined cell sorts before any bound.
+ */
+function compareCell(value, bound) {
+    if (value === undefined || value === null)
+        return -1;
+    const vNum = Number(value);
+    const bNum = Number(bound);
+    if (value !== '' && !Number.isNaN(vNum) && !Number.isNaN(bNum)) {
+        return vNum < bNum ? -1 : vNum > bNum ? 1 : 0;
     }
+    const b = String(bound);
+    return value < b ? -1 : value > b ? 1 : 0;
 }
 //# sourceMappingURL=csv-service.js.map

package/dist/services/csv-service.js.map

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