studiograph 1.3.3-next.9 → 1.3.4

package/dist/agent/orchestrator.d.ts

@@ -20,6 +20,8 @@ export interface AgentConfig {
     toolsDirs?: string[];
     /** Recent daily memory content (today + yesterday) injected into system prompt. */
     recentMemory?: string;
+    /** Shared WorkspaceManager instance (used by server to share state with agent). */
+    workspaceManager?: WorkspaceManager;
 }
 export interface AgentResponse {
     content: string;

package/dist/agent/orchestrator.js

@@ -14,6 +14,7 @@ import { getModel } from '@mariozechner/pi-ai';
 import { Agent } from '@mariozechner/pi-agent-core';
 import { WorkspaceManager } from '../core/workspace-manager.js';
 import { createGraphTools } from './tools/graph-tools.js';
+import { createSyncTools } from './tools/sync-tools.js';
 import { loadSkillIndex, buildSkillIndexPrompt, loadEagerSkills } from './skill-loader.js';
 import { createLoadSkillTool } from './tools/load-skill.js';
 import { loadCustomTools } from './tools/tool-loader.js';
@@ -56,8 +57,8 @@ export class AgentOrchestrator {
         const bundledSkillsDir = join(__dirname, 'skills');
         this.skillsDirs = [userSkillsDir, workspaceSkillsDir, bundledSkillsDir, ...(config.skillsDirs ?? [])];
         this.toolsDirs = [userToolsDir, workspaceToolsDir, ...(config.toolsDirs ?? [])];
-        // Initialize workspace manager
-        this.workspaceManager = new WorkspaceManager(this.workspacePath, this.config, this.gitUser);
+        // Use shared workspace manager if provided, otherwise create one
+        this.workspaceManager = config.workspaceManager ?? new WorkspaceManager(this.workspacePath, this.config, this.gitUser);
         // Initialize Pi-Mono agent (async tools loaded in createAgent)
         this.agent = this.createAgent();
     }
@@ -79,8 +80,7 @@ export class AgentOrchestrator {
         // Build tools first so we can auto-generate the tool reference for the prompt
         const tools = [
             ...createGraphTools(this.workspaceManager, this.gitUser, this.workspacePath, this.emitHighlight.bind(this), this.emitMutation.bind(this), () => this._currentUser, this.authService),
-            // Sync tools gated for MVP — re-enable when sync pipeline is production-ready
-            // ...createSyncTools(this.workspacePath, this.config, this.registryRef),
+            ...createSyncTools(this.workspacePath, this.config, this.registryRef),
             ...createOpsTools(this.workspacePath, this.config),
             ...createPermissionTools(this.authService),
             ...createFsTools(),
@@ -110,7 +110,7 @@ export class AgentOrchestrator {
         const context = { workspaceManager: this.workspaceManager, gitUser: this.gitUser };
         Promise.all([
             loadCustomTools(this.toolsDirs, context),
-            ConnectorManager.buildTools(ConnectorManager.loadConfigs()),
+            ConnectorManager.buildTools(ConnectorManager.loadConfigs(this.workspacePath)),
         ]).then(([customTools, connectorTools]) => {
             const extra = [...customTools];
             if (connectorTools.length > 0) {
@@ -166,6 +166,14 @@ export class AgentOrchestrator {
             .join('\n\n');
         base = base.replace('{{TOOL_REFERENCE}}', toolRef);
         const parts = [base.trim()];
+        // Inject workspace ABOUT.md as organizational context
+        const aboutPath = join(this.workspacePath, '.studiograph', 'ABOUT.md');
+        if (existsSync(aboutPath)) {
+            const aboutContent = readFileSync(aboutPath, 'utf-8');
+            if (aboutContent.trim()) {
+                parts.push(`## Workspace Identity\n\n${aboutContent}`);
+            }
+        }
         // Append workspace schema extensions (org-specific fields and custom types)
         const schemaSection = this.workspaceManager.getSchemaRegistry().toPromptSection();
         if (schemaSection) {

package/dist/agent/orchestrator.js.map

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package/dist/agent/skills/sync-configuration.md

@@ -42,14 +42,13 @@ Use this reference when helping users build or modify source configs at `.studio
 | `list_params` | No | Extra params for list tool. Pass array for multiple list calls merged |
 | `directory_patterns` | No | Directory patterns for file sources (frontmatter/unstructured) |
 | `write_mode` | No | `"entity"` (default, `id/main.md` folder) or `"collection"` (flat `id.md` file) |
-| `co_locate` | No | Co-locate as sub-content inside parent entity folder |
 | `list_tool` | No | Explicit MCP tool name for listing records (bypasses heuristic matching) |
 | `read_tool` | No | Explicit MCP tool name for reading records (bypasses heuristic matching) |
 
 ## Extraction Modes
 
 - **`structured`** — API JSON → field_map → frontmatter. No LLM. For Pipedrive, Linear, Granola, Asana.
-- **`frontmatter`** — Markdown files with YAML → field_map. No LLM. For Obsidian. Supports `_filename` and `_body` sentinels.
+- **`frontmatter`** — Markdown files with YAML → field_map. No LLM. Supports `_filename` and `_body` sentinels.
 - **`unstructured`** — Freeform text → LLM extraction. Slow, expensive. Last resort when no structured metadata exists.
 
 ## Field Map Syntax
@@ -80,33 +79,12 @@ Result: `["[[alice]]", ...]`
 | `wikilink` | `"Acme Corp"` | `"[[acme-corp]]"` |
 | `wikilink-array` | `["Alice", "Bob"]` | `["[[alice]]", "[[bob]]"]` |
 
-## Co-Location
-
-Writes entities as sub-content files inside a parent entity folder instead of standalone entity folders.
-
-**Config:** Add `co_locate` to a mapping:
-```json
-{
-  "co_locate": { "parent_field": "project", "subfolder": "tasks" },
-  "field_map": { "project": { "field": "project", "transform": "wikilink" } }
-}
-```
-
-**Result path:** `{target_repo}/{parent_id}/{subfolder}/{entity_id}.md`
-Example: `projects/cooper-hewitt-brand-refresh/tasks/sch-101.md`
-
-**Rules:**
-- `parent_field` must be a wikilink target in `field_map` so the reference is available
-- Entities without a parent value are **skipped** (not an error)
-- Co-located files are sub-content, not graph entities (no `entity_id/main.md` folder)
-- `target_repo` should be the repo where the **parent** entities live
-
 ## Write Mode
 
 Controls how entities are written to disk:
 
-- **`entity`** (default) — `repo/entity-id/main.md` folder. Fully indexed, supports sub-content. Use for core types (projects, clients, people).
-- **`collection`** — `repo/entity-id.md` flat file. Simpler, no folder overhead. Use for high-volume types (meetings, notes, references).
+- **`entity`** (default) — `repo/entity-type/entity-id.md` in a typed subfolder. Fully indexed. Use for core types (projects, clients, people).
+- **`collection`** — `repo/entity-id.md` flat file at collection root. Use for high-volume types (meetings, notes, references).
 
 ## Explicit MCP Tool Selection
 
@@ -127,14 +105,11 @@ When omitted, the pipeline uses heuristic matching (looking for tools containing
 |--------|----------|-------|
 | **Pipedrive** | deal→project, person→person, org→client | Ready to sync |
 | **Granola** | document→meeting | `fetch_details: true`, `list_limit: 1000` |
-| **Linear** | issue→task (co-located under projects), project→project | Issues use `co_locate` |
+| **Linear** | issue→task, project→project | Tasks written to typed subfolder |
 | **Asana** | task→task, project→project | Needs `list_params: { workspace: "GID" }` |
-| **Obsidian** | Example mappings only (`.template` file) | Needs customization per vault |
 
 ## Configuration Patterns
 
-**Adding co-location to any mapping:** Add `co_locate: { parent_field, subfolder }` and ensure `parent_field` is a wikilink target in `field_map`.
-
 **Multiple list calls:** Set `list_params` as an array: `[{ workspace: "123", archived: false }, { workspace: "123", archived: true }]`
 
 **Custom source (no built-in):** Create a source config with `entity_mappings` from scratch. Choose extraction_mode, define field_map targeting entity schema fields, set target_repo.

package/dist/agent/skills/sync-setup.md

@@ -6,7 +6,7 @@ loading: eager
 
 # Entity Sync
 
-You can sync data from external sources (Linear, Pipedrive, Granola, Obsidian, etc.) into the knowledge graph using the sync tools.
+You can sync data from external sources (Linear, Pipedrive, Granola, Google Drive, Asana, etc.) into the knowledge graph using the sync tools.
 
 ## First-Time Setup
 
@@ -46,7 +46,7 @@ When a user asks to adjust, change, or view a source config, **immediately call
 3. Build the updated `entity_mappings` array (you must pass the complete array — it replaces, not merges)
 4. `sync_setup_source({ name: "...", entity_mappings: [...], force: true })` — overwrite with updated config
 
-Common adjustments: changing `field_map` entries, adding/removing entity mappings, changing `target_repo`, adding `co_locate`, switching `write_mode`, adjusting `status_map`, adding `list_tool`/`read_tool`.
+Common adjustments: changing `field_map` entries, adding/removing entity mappings, changing `target_repo`, switching `write_mode`, adjusting `status_map`, adding `list_tool`/`read_tool`.
 
 ## Repeat Sync Flow
 
@@ -71,8 +71,6 @@ After `sync_apply`, explain what happened to the user:
 
 - **"Uncommitted changes"** — sync requires a clean working tree. Tell the user to commit or stash changes first, or use `--force` to override
 - **"Connector not found"** — the connector isn't set up. User must run `studiograph connector add <name>` in terminal
-- **Entities skipped during apply** — for co-located entities, check that the `parent_field` has a value in the extracted frontmatter. Missing parent = skip.
-- **Obsidian template file** — Obsidian creates a `.template` file instead of default mappings (every vault is different). Tell the user to copy mappings from the template into the source config and adjust `directory_patterns` and `field_map` for their vault.
 
 ## Important Rules
 

package/dist/agent/tools/ops-tools.js

@@ -10,10 +10,7 @@ import { spawnSync, execSync } from 'child_process';
 import { existsSync, readFileSync, mkdirSync, cpSync, readdirSync, writeFileSync, rmSync } from 'fs';
 import { join } from 'path';
 import { tmpdir, homedir } from 'os';
-import { Octokit } from '@octokit/rest';
 import { wrapToolResult } from './graph-tools.js';
-import { createGitHubRepo, initAndPush } from '../../services/github-provisioner.js';
-import { Workspace } from '../../core/workspace.js';
 const RAILWAY_API = 'https://backboard.railway.com/graphql/v2';
 async function railwayQuery(token, query, variables = {}) {
     const res = await fetch(RAILWAY_API, {
@@ -37,22 +34,6 @@ function loadUserConfig() {
         return {};
     }
 }
-/** Load GitHub PAT from env vars or ~/.studiograph/auth.json */
-function loadGitHubToken() {
-    const envToken = process.env.STUDIOGRAPH_GITHUB_TOKEN || process.env.GITHUB_TOKEN;
-    if (envToken)
-        return envToken;
-    const authPath = join(homedir(), '.studiograph', 'auth.json');
-    if (!existsSync(authPath))
-        return null;
-    try {
-        const data = JSON.parse(readFileSync(authPath, 'utf-8'));
-        return data.token || null;
-    }
-    catch {
-        return null;
-    }
-}
 /**
  * Create operations tools for the agent
  */
@@ -266,42 +247,30 @@ export function createOpsTools(workspacePath, workspaceConfig) {
         {
             name: 'deploy_railway',
             label: 'Deploy to Railway',
-            description: 'Deploy the Studiograph workspace to Railway (first-time setup). Creates a project, service, volume, sets env vars, and triggers a deploy. Reads tokens from ~/.studiograph/user.json and ~/.studiograph/auth.json automatically. Only ask the user for tokens if they are not already saved. For redeploying an existing service, use redeploy_railway instead.',
+            description: 'Deploy the Studiograph workspace to Railway (first-time setup). Creates a project, service, volume, sets env vars, and triggers a deploy. Reads tokens from ~/.studiograph/user.json automatically. Only ask the user for tokens if they are not already saved. For redeploying an existing service, use redeploy_railway instead.',
             parameters: T.Object({
                 railwayToken: T.Optional(T.String({ description: 'Railway API token (reads from user config if omitted)' })),
-                githubToken: T.Optional(T.String({ description: 'GitHub PAT (reads from auth.json if omitted)' })),
                 projectName: T.Optional(T.String({ description: 'Railway project name (default: team name)' })),
+                anthropicApiKey: T.Optional(T.String({ description: 'Anthropic API key for the AI agent' })),
             }),
             execute: async (_toolCallId, params) => {
                 try {
-                    // Resolve tokens from params, user config, or auth
+                    // Resolve tokens from params or user config
                     const userConfig = loadUserConfig();
                     const railwayToken = params.railwayToken || process.env.RAILWAY_TOKEN || userConfig.railway_token;
                     if (!railwayToken) {
                         return wrapToolResult({ success: false, error: 'No Railway token found. Provide railwayToken parameter, set RAILWAY_TOKEN env var, or save railway_token in ~/.studiograph/user.json.' });
                     }
-                    const githubToken = params.githubToken || loadGitHubToken();
-                    if (!githubToken) {
-                        return wrapToolResult({ success: false, error: 'No GitHub token found. Provide githubToken parameter, run `studiograph auth github`, or set GITHUB_TOKEN env var.' });
-                    }
-                    // Detect config repo URL
-                    const configDir = join(workspacePath, '.studiograph');
-                    const remote = spawnSync('git', ['remote', 'get-url', 'origin'], { cwd: configDir, encoding: 'utf-8' });
-                    const configRepoUrl = remote.status === 0 ? remote.stdout.trim() : null;
-                    if (!configRepoUrl) {
-                        return wrapToolResult({ error: 'Could not detect config repo URL from .studiograph remote' });
-                    }
                     const { randomBytes } = await import('crypto');
                     const apiKey = randomBytes(24).toString('base64url');
-                    const webhookSecret = randomBytes(20).toString('hex');
                     const projectName = params.projectName
                         || (workspaceConfig.team_name ? `${workspaceConfig.team_name} — Studiograph` : 'Studiograph');
                     // Determine start command from package version
                     const pkgPath = new URL('../../../package.json', import.meta.url);
                     const pkgVersion = JSON.parse(readFileSync(pkgPath, 'utf-8')).version;
                     const startCommand = pkgVersion.includes('-')
-                        ? `npx studiograph@${pkgVersion} serve`
-                        : 'npx studiograph serve';
+                        ? `cd /workspace && npx studiograph@${pkgVersion} serve`
+                        : 'cd /workspace && npx studiograph serve';
                     const query = (q, variables = {}) => railwayQuery(railwayToken, q, variables);
                     // Create project
                     const projectData = await query(`
@@ -329,15 +298,15 @@ export function createOpsTools(workspacePath, workspaceConfig) {
             mutation($input: VolumeCreateInput!) { volumeCreate(input: $input) { id } }
           `, { input: { projectId, serviceId, mountPath: '/workspace' } });
                     // Set env vars
+                    const envVars = {
+                        PORT: '3001',
+                        API_KEYS: apiKey,
+                    };
+                    if (params.anthropicApiKey)
+                        envVars.ANTHROPIC_API_KEY = params.anthropicApiKey;
                     await query(`
             mutation($input: VariableCollectionUpsertInput!) { variableCollectionUpsert(input: $input) }
-          `, { input: { projectId, environmentId: envId, serviceId, variables: {
-                                STUDIOGRAPH_CONFIG_REPO: configRepoUrl,
-                                GITHUB_TOKEN: githubToken,
-                                PORT: '3001',
-                                API_KEYS: apiKey,
-                                WEBHOOK_SECRET: webhookSecret,
-                            } } });
+          `, { input: { projectId, environmentId: envId, serviceId, variables: envVars } });
                     // Generate domain
                     let domain = '';
                     try {
@@ -359,7 +328,6 @@ export function createOpsTools(workspacePath, workspaceConfig) {
                         domain: domain ? `https://${domain}` : null,
                         dashboardUrl: `https://railway.com/project/${projectId}`,
                         apiKey,
-                        webhookSecret,
                         startCommand,
                     });
                 }
@@ -412,13 +380,13 @@ export function createOpsTools(workspacePath, workspaceConfig) {
                         return wrapToolResult({ success: false, error: 'Could not determine Railway environment.' });
                     }
                     // Update start command to current version
-                    let startCommand = 'npx studiograph serve';
+                    let startCommand = 'cd /workspace && npx studiograph serve';
                     try {
                         const pkgPath = new URL('../../../package.json', import.meta.url);
                         const pkgVersion = JSON.parse(readFileSync(pkgPath, 'utf-8')).version;
                         startCommand = pkgVersion.includes('-')
-                            ? `npx studiograph@${pkgVersion} serve`
-                            : 'npx studiograph serve';
+                            ? `cd /workspace && npx studiograph@${pkgVersion} serve`
+                            : 'cd /workspace && npx studiograph serve';
                         await railwayQuery(token, `
               mutation($serviceId: String!, $environmentId: String!, $input: ServiceInstanceUpdateInput!) {
                 serviceInstanceUpdate(serviceId: $serviceId, environmentId: $environmentId, input: $input)
@@ -458,85 +426,6 @@ export function createOpsTools(workspacePath, workspaceConfig) {
                 }
             },
         },
-        // Provision GitHub repos
-        {
-            name: 'provision_repos',
-            label: 'Provision GitHub Repos',
-            description: 'Create GitHub repositories and push local repos that have no remote. Provisions repos that are missing a github_url in workspace config. Always confirm with the user before calling this.',
-            parameters: T.Object({
-                repos: T.Optional(T.Array(T.String(), { description: 'Specific repo names to provision (default: all unprovisioned repos)' })),
-                org: T.Optional(T.String({ description: 'GitHub organization (default: from workspace config)' })),
-            }),
-            execute: async (_toolCallId, params) => {
-                try {
-                    // Resolve GitHub org
-                    const org = params.org || workspaceConfig.github?.org;
-                    if (!org) {
-                        return wrapToolResult({ error: 'No GitHub org specified. Provide an org parameter or set github.org in workspace config.' });
-                    }
-                    // Resolve GitHub token
-                    const token = loadGitHubToken();
-                    if (!token) {
-                        return wrapToolResult({ error: 'No GitHub token found. Run `studiograph auth github`, set GITHUB_TOKEN env var, or save token in ~/.studiograph/auth.json.' });
-                    }
-                    const octokit = new Octokit({ auth: token });
-                    // Load fresh config to get current repo state
-                    const workspace = new Workspace(workspacePath);
-                    const config = await workspace.loadConfig();
-                    // Filter repos to provision
-                    let targetRepos = config.repos;
-                    if (params.repos?.length) {
-                        targetRepos = targetRepos.filter((r) => params.repos.includes(r.name));
-                        const found = targetRepos.map((r) => r.name);
-                        const missing = params.repos.filter((n) => !found.includes(n));
-                        if (missing.length) {
-                            return wrapToolResult({ error: `Repos not found in workspace config: ${missing.join(', ')}` });
-                        }
-                    }
-                    // Only provision repos without github_url
-                    const unprovisioned = targetRepos.filter((r) => !r.github_url);
-                    const skippedNames = targetRepos.filter((r) => r.github_url).map((r) => r.name);
-                    if (unprovisioned.length === 0) {
-                        return wrapToolResult({ provisioned: [], skipped: skippedNames, message: 'All repos already have remotes.' });
-                    }
-                    const provisioned = [];
-                    const errors = [];
-                    for (const repo of unprovisioned) {
-                        try {
-                            const isPrivate = true;
-                            const cloneUrl = await createGitHubRepo(octokit, org, repo.name, isPrivate, repo.description);
-                            const localPath = join(workspacePath, repo.path);
-                            const pushed = initAndPush(localPath, cloneUrl);
-                            // Update config entry
-                            const idx = config.repos.findIndex((r) => r.name === repo.name);
-                            if (idx !== -1) {
-                                config.repos[idx] = { ...config.repos[idx], github_url: cloneUrl };
-                            }
-                            provisioned.push(repo.name);
-                            if (!pushed) {
-                                errors.push(`${repo.name}: created repo but no commits to push`);
-                            }
-                        }
-                        catch (err) {
-                            errors.push(`${repo.name}: ${err instanceof Error ? err.message : String(err)}`);
-                        }
-                    }
-                    // Persist updated config
-                    if (provisioned.length > 0) {
-                        workspace.writeConfig(config);
-                    }
-                    return wrapToolResult({
-                        provisioned,
-                        skipped: skippedNames,
-                        org,
-                        ...(errors.length ? { errors } : {}),
-                    });
-                }
-                catch (err) {
-                    return wrapToolResult({ error: err instanceof Error ? err.message : String(err) });
-                }
-            },
-        },
     ];
 }
 //# sourceMappingURL=ops-tools.js.map

package/dist/agent/tools/ops-tools.js.map

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package/dist/agent/tools/sync-tools.d.ts

@@ -1,10 +1,11 @@
 /**
- * Sync & Enrich Tools for Studiograph Agent
+ * Sync & Workspace Tools for Studiograph Agent
  *
- * These tools allow the agent to orchestrate sync and enrich operations:
- * - Run the sync pipeline, apply staging, commit
- * - Run LLM enrichment on entities
- * - Manage source configs
+ * These tools allow the agent to:
+ * - Sync external data into collections (collection-scoped sync)
+ * - Refresh individual synced entities from their source
+ * - Manage workspace git operations (commit, push, pull, status)
+ * - Inspect MCP connectors for sync configuration
  */
 import type { WorkspaceConfig } from '../../core/types.js';
 import type { ConnectorRegistry } from './connector-tools.js';
@@ -23,7 +24,7 @@ export declare function createSyncTools(workspacePath: string, workspaceConfig:
     label: string;
     description: string;
     parameters: import("@sinclair/typebox").TObject<{}>;
-    execute: (toolCallId: string, params: any) => Promise<{
+    execute: (toolCallId: string, _params: any) => Promise<{
         content: {
             type: "text";
             text: string;