studiograph 1.1.2 → 1.2.0-beta.1

package/dist/services/sync/graphrag-context.js

@@ -0,0 +1,109 @@
+/**
+ * GraphRAG context builder — synchronous graph traversal.
+ *
+ * Scans source content for known node names, collects neighbors
+ * and edge descriptions, and formats as markdown context sections.
+ */
+/**
+ * Find entities mentioned in source content and collect their graph neighbors.
+ */
+export function getEntityContext(graph, entityName, entityType, sourceContent) {
+    if (graph.order === 0) {
+        return { formattedContext: '' };
+    }
+    const contentLower = sourceContent.toLowerCase();
+    // Collect all node names that appear in the source content
+    const matchedNodes = [];
+    graph.forEachNode((node, attrs) => {
+        const name = attrs.name ?? node;
+        if (name.length < 3)
+            return; // skip very short names to avoid false matches
+        if (contentLower.includes(name.toLowerCase())) {
+            matchedNodes.push(node);
+        }
+    });
+    // Also check for the explicit entity name
+    const entityNodeKey = findNodeByName(graph, entityName);
+    if (entityNodeKey && !matchedNodes.includes(entityNodeKey)) {
+        matchedNodes.push(entityNodeKey);
+    }
+    if (matchedNodes.length === 0) {
+        return { formattedContext: '' };
+    }
+    // Collect related entities and relationships
+    const relatedEntities = new Map();
+    const relationships = [];
+    for (const nodeKey of matchedNodes) {
+        const nodeAttrs = graph.getNodeAttributes(nodeKey);
+        // Add the matched node itself as context
+        relatedEntities.set(nodeKey, {
+            name: nodeAttrs.name ?? nodeKey,
+            type: nodeAttrs.type ?? 'unknown',
+            description: nodeAttrs.description ?? '',
+        });
+        // Traverse neighbors
+        graph.forEachNeighbor(nodeKey, (neighbor, neighborAttrs) => {
+            if (!relatedEntities.has(neighbor)) {
+                relatedEntities.set(neighbor, {
+                    name: neighborAttrs.name ?? neighbor,
+                    type: neighborAttrs.type ?? 'unknown',
+                    description: neighborAttrs.description ?? '',
+                });
+            }
+        });
+        // Collect edges from this node
+        graph.forEachEdge(nodeKey, (_edge, edgeAttrs, source, target) => {
+            const sourceAttrs = graph.getNodeAttributes(source);
+            const targetAttrs = graph.getNodeAttributes(target);
+            relationships.push({
+                source: sourceAttrs.name ?? source,
+                target: targetAttrs.name ?? target,
+                description: edgeAttrs.description ?? '',
+            });
+        });
+    }
+    // Format as markdown
+    const sections = [];
+    if (relatedEntities.size > 0) {
+        const lines = ['### Related Entities'];
+        for (const [, entity] of relatedEntities) {
+            const desc = entity.description ? ` — ${entity.description}` : '';
+            lines.push(`- **${entity.name}** (${entity.type})${desc}`);
+        }
+        sections.push(lines.join('\n'));
+    }
+    if (relationships.length > 0) {
+        // Deduplicate relationships
+        const seen = new Set();
+        const lines = ['### Relationships'];
+        for (const rel of relationships) {
+            const key = `${rel.source}→${rel.target}`;
+            if (seen.has(key))
+                continue;
+            seen.add(key);
+            const desc = rel.description ? `: ${rel.description}` : '';
+            lines.push(`- ${rel.source} → ${rel.target}${desc}`);
+        }
+        sections.push(lines.join('\n'));
+    }
+    return {
+        formattedContext: sections.join('\n\n'),
+    };
+}
+/**
+ * Look up a node by its name attribute (case-insensitive).
+ */
+function findNodeByName(graph, name) {
+    const nameLower = name.toLowerCase();
+    let found;
+    graph.forEachNode((node, attrs) => {
+        if (found)
+            return;
+        const nodeName = attrs.name ?? node;
+        if (nodeName.toLowerCase() === nameLower) {
+            found = node;
+        }
+    });
+    return found;
+}
+//# sourceMappingURL=graphrag-context.js.map

package/dist/services/sync/graphrag-context.js.map

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package/dist/services/sync/graphrag-indexer.d.ts

@@ -0,0 +1,30 @@
+/**
+ * GraphRAG Indexer — batch LLM extraction into a Graphology graph.
+ *
+ * Reads markdown files from a source directory, batches them into groups,
+ * sends each batch to the LLM for entity/relationship extraction, and
+ * builds a Graphology graph serialized to disk.
+ */
+import type { GraphRAGConfig } from './graphrag-config.js';
+interface IndexedFile {
+    path: string;
+    relativePath: string;
+    content: string;
+}
+export interface IndexResult {
+    files_processed: number;
+    entities_extracted: number;
+    relationships_extracted: number;
+    graph_path: string;
+}
+/**
+ * Index a directory of markdown files into a Graphology knowledge graph.
+ */
+export declare function indexIntoGraphRAG(options: {
+    sourcePath: string;
+    config: GraphRAGConfig;
+    incremental?: boolean;
+    onProgress?: (msg: string) => void;
+}): Promise<IndexResult>;
+export declare function collectMarkdownFiles(dirPath: string): IndexedFile[];
+export {};

package/dist/services/sync/graphrag-indexer.js

@@ -0,0 +1,358 @@
+/**
+ * GraphRAG Indexer — batch LLM extraction into a Graphology graph.
+ *
+ * Reads markdown files from a source directory, batches them into groups,
+ * sends each batch to the LLM for entity/relationship extraction, and
+ * builds a Graphology graph serialized to disk.
+ */
+import Graph from 'graphology';
+import { existsSync, mkdirSync, readFileSync, readdirSync, statSync, writeFileSync } from 'fs';
+import { join, dirname, relative, extname } from 'path';
+import { generateText } from 'ai';
+import { z } from 'zod';
+import { createModel } from './model-factory.js';
+import { loadUserConfig, getAnthropicCredential } from '../../core/user-config.js';
+import { saveGraphRAGConfig } from './graphrag-config.js';
+const BATCH_SIZE = 12;
+const MAX_CHARS_PER_BATCH = 40_000; // ~10k tokens
+const BATCH_CONCURRENCY = 5;
+const DEFAULT_INDEXING_MODEL = 'claude-haiku-4-5-20251001';
+const DEFAULT_PROVIDER = 'anthropic';
+// ── Zod schemas for structured LLM output ───────────────────────────────────
+const EntitySchema = z.object({
+    name: z.string().describe('Canonical name of the entity'),
+    type: z.string().describe('Entity type: person, client, project, meeting, process, deliverable, tool, concept, or other'),
+    description: z.string().describe('One-sentence description'),
+    sources: z.array(z.string()).describe('Which document filenames mention this entity'),
+});
+const RelationshipSchema = z.object({
+    source: z.string().describe('Source entity name (must match an entity name exactly)'),
+    target: z.string().describe('Target entity name (must match an entity name exactly)'),
+    description: z.string().describe('Description of the relationship'),
+    sources: z.array(z.string()).describe('Which document filenames evidence this relationship'),
+});
+const ExtractionResultSchema = z.object({
+    entities: z.array(EntitySchema),
+    relationships: z.array(RelationshipSchema).default([]),
+});
+const JSON_INSTRUCTION = `
+
+Respond with ONLY a JSON object — no markdown fences, no commentary. Use this exact shape:
+{
+  "entities": [{ "name": "...", "type": "person|client|project|meeting|process|deliverable|tool|concept", "description": "...", "sources": ["filename.md"] }],
+  "relationships": [{ "source": "Entity Name", "target": "Entity Name", "description": "...", "sources": ["filename.md"] }]
+}`;
+// ── Public API ──────────────────────────────────────────────────────────────
+/**
+ * Index a directory of markdown files into a Graphology knowledge graph.
+ */
+export async function indexIntoGraphRAG(options) {
+    const { sourcePath, config, onProgress } = options;
+    const log = onProgress ?? (() => { });
+    // Collect markdown files
+    log('Scanning for markdown files...');
+    const files = collectMarkdownFiles(sourcePath);
+    log(`Found ${files.length} markdown files`);
+    if (files.length === 0) {
+        return { files_processed: 0, entities_extracted: 0, relationships_extracted: 0, graph_path: config.graph_path };
+    }
+    // Load existing graph for incremental, or start fresh
+    const graph = new Graph();
+    if (options.incremental && existsSync(config.graph_path)) {
+        try {
+            const data = JSON.parse(readFileSync(config.graph_path, 'utf-8'));
+            graph.import(data);
+            log(`Loaded existing graph: ${graph.order} nodes, ${graph.size} edges`);
+        }
+        catch {
+            log('Could not load existing graph, starting fresh');
+        }
+    }
+    // Batch files
+    const batches = batchFiles(files);
+    log(`Processing ${batches.length} batches...`);
+    let totalEntities = 0;
+    let totalRelationships = 0;
+    // Resolve model config
+    const userConfig = loadUserConfig();
+    const provider = userConfig.model_provider ?? DEFAULT_PROVIDER;
+    const modelId = DEFAULT_INDEXING_MODEL; // Always use Haiku for bulk indexing — 12x cheaper than Sonnet
+    const apiKey = getAnthropicCredential(userConfig) ?? undefined;
+    const llmModel = createModel(provider, modelId, apiKey);
+    log(`Using model: ${modelId}`);
+    const failedBatches = [];
+    // Process batches concurrently in groups of 3
+    for (let i = 0; i < batches.length; i += BATCH_CONCURRENCY) {
+        const group = batches.slice(i, i + BATCH_CONCURRENCY);
+        const groupStart = i;
+        const results = await Promise.all(group.map(async (batch, j) => {
+            const batchNum = groupStart + j + 1;
+            log(`  Batch ${batchNum}/${batches.length} (${batch.length} files)...`);
+            return processBatch(llmModel, batch, batchNum, batches.length, log);
+        }));
+        // Merge successes, queue failures for retry
+        for (let j = 0; j < results.length; j++) {
+            const extraction = results[j];
+            if (!extraction) {
+                failedBatches.push({ batchNum: groupStart + j + 1, batch: group[j] });
+                continue;
+            }
+            mergeExtraction(graph, extraction);
+            totalEntities += extraction.entities.length;
+            totalRelationships += extraction.relationships.length;
+        }
+    }
+    // Retry failed batches sequentially (no concurrency pressure)
+    if (failedBatches.length > 0) {
+        log(`\nRetrying ${failedBatches.length} failed batches sequentially...`);
+        for (const { batchNum, batch } of failedBatches) {
+            log(`  Retry batch ${batchNum} (${batch.length} files)...`);
+            // Small delay to avoid rate limit
+            await new Promise(r => setTimeout(r, 1000));
+            const extraction = await processBatch(llmModel, batch, batchNum, batches.length, log);
+            if (extraction) {
+                mergeExtraction(graph, extraction);
+                totalEntities += extraction.entities.length;
+                totalRelationships += extraction.relationships.length;
+            }
+        }
+    }
+    function mergeExtraction(g, extraction) {
+        for (const entity of extraction.entities) {
+            const nodeKey = entity.name.toLowerCase().replace(/\s+/g, '-');
+            g.mergeNode(nodeKey, {
+                name: entity.name,
+                type: entity.type,
+                description: entity.description,
+                sources: JSON.stringify(entity.sources),
+            });
+        }
+        for (const rel of extraction.relationships) {
+            const sourceKey = rel.source.toLowerCase().replace(/\s+/g, '-');
+            const targetKey = rel.target.toLowerCase().replace(/\s+/g, '-');
+            if (g.hasNode(sourceKey) && g.hasNode(targetKey)) {
+                g.mergeEdge(sourceKey, targetKey, {
+                    description: rel.description,
+                    sources: JSON.stringify(rel.sources),
+                });
+            }
+        }
+    }
+    // Serialize graph to disk
+    mkdirSync(dirname(config.graph_path), { recursive: true });
+    const serialized = graph.export();
+    writeFileSync(config.graph_path, JSON.stringify(serialized, null, 2));
+    log(`\nGraph saved: ${graph.order} nodes, ${graph.size} edges → ${config.graph_path}`);
+    // Update config
+    config.last_indexed = new Date().toISOString();
+    config.files_indexed = files.length;
+    saveGraphRAGConfig(config);
+    return {
+        files_processed: files.length,
+        entities_extracted: totalEntities,
+        relationships_extracted: totalRelationships,
+        graph_path: config.graph_path,
+    };
+}
+// ── Single batch processor ──────────────────────────────────────────────────
+async function processBatch(llmModel, batch, batchNum, totalBatches, log) {
+    try {
+        // Use plain text mode — no structured output wrapper.
+        // Structured output (tool use) causes frequent "No output generated" errors.
+        const prompt = buildBatchPrompt(batch) + JSON_INSTRUCTION;
+        const result = await generateText({
+            model: llmModel,
+            prompt,
+            maxOutputTokens: 8192,
+            maxRetries: 0,
+        });
+        const raw = result.text ?? '';
+        if (!raw) {
+            log(`    Batch ${batchNum}: empty response`);
+            return null;
+        }
+        // Extract JSON from the response text
+        const jsonMatch = raw.match(/\{[\s\S]*"entities"[\s\S]*/);
+        if (!jsonMatch) {
+            log(`    Batch ${batchNum}: no JSON found (rawLen: ${raw.length})`);
+            return null;
+        }
+        // Repair truncated JSON — close unclosed arrays/objects
+        let jsonStr = jsonMatch[0];
+        try {
+            JSON.parse(jsonStr);
+        }
+        catch {
+            jsonStr = repairTruncatedJSON(jsonStr);
+        }
+        // Sanitize before Zod parsing — handle truncated objects
+        const rawObj = JSON.parse(jsonStr);
+        if (Array.isArray(rawObj.relationships)) {
+            rawObj.relationships = rawObj.relationships.filter((r) => r && typeof r.source === 'string' && typeof r.target === 'string');
+        }
+        const extraction = ExtractionResultSchema.parse(rawObj);
+        log(`    Batch ${batchNum}: ${extraction.entities.length} entities, ${extraction.relationships.length} relationships`);
+        return extraction;
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        log(`    Batch ${batchNum}: error — ${msg}`);
+        return null;
+    }
+}
+// ── JSON repair ─────────────────────────────────────────────────────────────
+/**
+ * Attempt to repair truncated JSON by removing the last incomplete element
+ * and closing unclosed arrays/objects.
+ */
+function repairTruncatedJSON(str) {
+    // Remove trailing incomplete object — find the last complete }, then close arrays/root
+    let s = str;
+    // Strip any trailing partial string/value after the last complete element
+    // Find the last complete JSON object boundary ("},")
+    const lastCompleteObj = s.lastIndexOf('},');
+    const lastCompleteArr = s.lastIndexOf('],');
+    const cutPoint = Math.max(lastCompleteObj, lastCompleteArr);
+    if (cutPoint > 0) {
+        s = s.slice(0, cutPoint + 1); // keep the } or ]
+    }
+    // Count unclosed brackets
+    let openBraces = 0;
+    let openBrackets = 0;
+    let inString = false;
+    let escape = false;
+    for (const ch of s) {
+        if (escape) {
+            escape = false;
+            continue;
+        }
+        if (ch === '\\' && inString) {
+            escape = true;
+            continue;
+        }
+        if (ch === '"') {
+            inString = !inString;
+            continue;
+        }
+        if (inString)
+            continue;
+        if (ch === '{')
+            openBraces++;
+        if (ch === '}')
+            openBraces--;
+        if (ch === '[')
+            openBrackets++;
+        if (ch === ']')
+            openBrackets--;
+    }
+    // Close unclosed brackets
+    while (openBrackets > 0) {
+        s += ']';
+        openBrackets--;
+    }
+    while (openBraces > 0) {
+        s += '}';
+        openBraces--;
+    }
+    return s;
+}
+// ── File collection ─────────────────────────────────────────────────────────
+export function collectMarkdownFiles(dirPath) {
+    const files = [];
+    walkDir(dirPath, dirPath, files);
+    return files;
+}
+function walkDir(basePath, currentPath, files) {
+    let entries;
+    try {
+        entries = readdirSync(currentPath);
+    }
+    catch {
+        return;
+    }
+    for (const entry of entries) {
+        // Skip hidden dirs and common noise
+        if (entry.startsWith('.') || entry === 'node_modules')
+            continue;
+        const fullPath = join(currentPath, entry);
+        let stat;
+        try {
+            stat = statSync(fullPath);
+        }
+        catch {
+            continue;
+        }
+        if (stat.isDirectory()) {
+            walkDir(basePath, fullPath, files);
+        }
+        else if (extname(entry) === '.md') {
+            try {
+                const content = readFileSync(fullPath, 'utf-8');
+                if (content.length > 0) {
+                    files.push({
+                        path: fullPath,
+                        relativePath: relative(basePath, fullPath),
+                        content,
+                    });
+                }
+            }
+            catch {
+                // skip unreadable files
+            }
+        }
+    }
+}
+// ── Batching ────────────────────────────────────────────────────────────────
+function batchFiles(files) {
+    const batches = [];
+    let currentBatch = [];
+    let currentChars = 0;
+    for (const file of files) {
+        const fileChars = file.content.length;
+        // Start a new batch if adding this file would exceed limits
+        if (currentBatch.length >= BATCH_SIZE || (currentChars + fileChars > MAX_CHARS_PER_BATCH && currentBatch.length > 0)) {
+            batches.push(currentBatch);
+            currentBatch = [];
+            currentChars = 0;
+        }
+        // Truncate very large files
+        const truncated = file.content.length > 8000
+            ? file.content.slice(0, 8000) + '\n\n[... truncated]'
+            : file.content;
+        currentBatch.push({ ...file, content: truncated });
+        currentChars += truncated.length;
+    }
+    if (currentBatch.length > 0) {
+        batches.push(currentBatch);
+    }
+    return batches;
+}
+// ── Prompt ──────────────────────────────────────────────────────────────────
+function buildBatchPrompt(files) {
+    const docs = files.map(f => `### [${f.relativePath}]\n${f.content}`).join('\n\n---\n\n');
+    return `Extract all named entities and their relationships from these documents.
+
+Focus on:
+- People (team members, clients, contacts)
+- Organizations/clients
+- Projects and engagements
+- Meetings and events
+- Processes and workflows
+- Deliverables and artifacts
+- Tools and platforms
+
+For each entity, identify:
+- A canonical name (full name preferred, e.g. "Kenton Powell" not "Kenton")
+- Its type (person, client, project, meeting, process, deliverable, tool, concept)
+- A brief one-sentence description
+- Which documents mention it
+
+For relationships, capture how entities connect (e.g. "works on", "attended", "delivered to", "uses").
+
+## Documents
+
+${docs}
+
+Extract all entities and relationships you can identify across these documents. Merge duplicate references to the same entity (e.g. "Kenton" and "Kenton Powell" should be one entity).`;
+}
+//# sourceMappingURL=graphrag-indexer.js.map

package/dist/services/sync/graphrag-indexer.js.map

@@ -0,0 +1 @@
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package/dist/services/sync/llm.d.ts

@@ -0,0 +1,32 @@
+/**
+ * LLM utilities for the sync pipeline — powered by the Vercel AI SDK.
+ *
+ * - llmExtract: Structured extraction from unstructured content
+ * - llmEnrich: Enrichment with cross-source context
+ * - llmGraphMatch: Entity deduplication comparison
+ *
+ * All three functions use generateText + Output.object() for Zod-validated
+ * structured output. Provider is configurable via user config:
+ *   enrichment_model_id → model_id → 'claude-sonnet-4-5-20250929'
+ *   enrichment_model_provider → model_provider → 'anthropic'
+ */
+/**
+ * Extract structured frontmatter from content using LLM.
+ */
+export declare function llmExtract(content: string, entityType: string, schema: any, graphragContext?: string): Promise<Record<string, any>>;
+/**
+ * Enrich an entity with cross-source context using LLM.
+ * Returns updated frontmatter and generated content.
+ */
+export declare function llmEnrich(entityData: Record<string, any>, contextBundle: string, entityType: string, schema: any): Promise<{
+    frontmatter: Record<string, any>;
+    content: string;
+}>;
+/**
+ * Ask LLM whether two entities (staged vs existing) are the same real-world entity.
+ */
+export declare function llmGraphMatch(stagedFrontmatter: Record<string, any>, existingFrontmatter: Record<string, any>, entityType: string): Promise<{
+    is_same: boolean;
+    confidence: number;
+    reasoning: string;
+}>;