spec-gen-cli 1.1.0 → 1.2.0

package/README.md

@@ -22,6 +22,9 @@ spec-gen init       # Detect project type, create config
 spec-gen analyze    # Static analysis (no API key needed)
 spec-gen generate   # Generate specs (requires API key)
 spec-gen drift      # Check for spec drift
+
+# Troubleshoot setup issues
+spec-gen doctor     # Check environment and configuration
 ```
 
 <details>
@@ -86,8 +89,10 @@ npm run dev
 
 Scans your codebase using pure static analysis:
 - Walks the directory tree, respects .gitignore, scores files by significance
-- Parses imports and exports to build a dependency graph
-- Clusters related files into business domains automatically
+- Parses imports and exports to build a dependency graph (TypeScript, JavaScript, Python, Go, Rust, Ruby, Java, C++)
+- Detects HTTP cross-language edges: matches `fetch`/`axios`/`ky`/`got` calls in JS/TS files to FastAPI/Flask/Django route definitions in Python files, creating cross-language dependency edges with `exact`, `path`, or `fuzzy` confidence
+- Resolves Python absolute imports (`from services.retriever import X`) to local files
+- Clusters related files into structural business domains automatically
 - Produces structured context that makes LLM generation more accurate
 
 **2. Generate** (API key required)
@@ -143,6 +148,8 @@ graph TD
             FW[File Walker] --> SS[Significance Scorer]
             SS --> IP[Import Parser]
             IP --> DG[Dependency Graph]
+            SS --> HR[HTTP Route Parser]
+            HR -->|cross-language edges| DG
             DG --> RM[Repository Mapper]
             RM --> AG[Artifact Generator]
         end
@@ -412,6 +419,7 @@ Priority: CLI flags > environment variables > config file > provider defaults.
 | `spec-gen run` | Full pipeline: init, analyze, generate | Yes |
 | `spec-gen view` | Launch interactive graph & spec viewer in the browser | No |
 | `spec-gen mcp` | Start MCP server (stdio, for Cline / Claude Code) | No |
+| `spec-gen doctor` | Check environment and configuration for common issues | No |
 
 ### Global Options
 
@@ -440,6 +448,7 @@ spec-gen drift [options]
   --json                 # JSON output
   --fail-on <severity>   # Exit non-zero threshold: error, warning, info
   --max-files <n>        # Max changed files to analyze (default: 100)
+  --verbose              # Show detailed issue information
   --install-hook         # Install pre-commit hook
   --uninstall-hook       # Remove pre-commit hook
 ```
@@ -455,6 +464,23 @@ spec-gen generate [options]
   --no-overwrite         # Skip existing files
   --adr                  # Also generate ADRs
   --adr-only             # Generate only ADRs
+  --reanalyze            # Force fresh analysis even if recent exists
+  --analysis <path>      # Path to existing analysis directory
+  --output-dir <path>    # Override openspec output location
+  -y, --yes              # Skip confirmation prompts
+```
+
+### Run Options
+
+```bash
+spec-gen run [options]
+  --force                # Reinitialize even if config exists
+  --reanalyze            # Force fresh analysis even if recent exists
+  --model <name>         # LLM model to use for generation
+  --dry-run              # Show what would be done without making changes
+  -y, --yes              # Skip all confirmation prompts
+  --max-files <n>        # Maximum files to analyze (default: 500)
+  --adr                  # Also generate Architecture Decision Records
 ```
 
 ### Analyze Options
@@ -467,6 +493,7 @@ spec-gen analyze [options]
   --exclude <glob>       # Additional exclude patterns
   --force                # Force re-analysis (bypass 1-hour cache)
   --embed                # Build semantic vector index after analysis (requires embedding config)
+  --reindex-specs        # Re-index OpenSpec specs into the vector index without re-running full analysis
 ```
 
 ### Verify Options
@@ -477,52 +504,53 @@ spec-gen verify [options]
   --threshold <0-1>      # Minimum score to pass (default: 0.7)
   --files <paths>        # Specific files to verify
   --domains <list>       # Only verify specific domains
+  --verbose              # Show detailed prediction vs actual comparison
   --json                 # JSON output
 ```
 
+### Doctor
+
+`spec-gen doctor` runs a self-diagnostic and surfaces actionable fixes when something is misconfigured or missing:
+
+```bash
+spec-gen doctor          # Run all checks
+spec-gen doctor --json   # JSON output for scripting
+```
+
+Checks performed:
+
+| Check | What it looks for |
+|-------|------------------|
+| Node.js version | ≥ 20 required |
+| Git repository | `.git` directory and `git` binary on PATH |
+| spec-gen config | `.spec-gen/config.json` exists and is parseable |
+| Analysis artifacts | `repo-structure.json` freshness (warns if >24h old) |
+| OpenSpec directory | `openspec/specs/` exists |
+| LLM provider | API key or `claude` CLI detected |
+| Disk space | Warns < 500 MB, fails < 200 MB |
+
+Run `spec-gen doctor` whenever setup instructions aren't working — it tells you exactly what to fix and how.
+
 ## MCP Server
 
 `spec-gen mcp` starts spec-gen as a [Model Context Protocol](https://modelcontextprotocol.io/) server over stdio, exposing static analysis as tools that any MCP-compatible AI agent (Cline, Roo Code, Kilocode, Claude Code, Cursor...) can call directly -- no API key required.
 
 ### Setup
 
-**Claude Code** -- add a `.mcp.json` at your project root (the repo ships one):
+**Claude Code** -- add a `.mcp.json` at your project root:
 
 ```json
 {
   "mcpServers": {
     "spec-gen": {
-      "command": "node",
-      "args": ["/absolute/path/to/spec-gen/dist/cli/index.js", "mcp"]
+      "command": "spec-gen",
+      "args": ["mcp"]
     }
   }
 }
 ```
 
-**Cline / Roo Code / Kilocode** -- add the same block under `mcpServers` in the MCP settings JSON of your editor.
-
-### Quick Start
-
-**1. Build spec-gen**
-
-```bash
-git clone https://github.com/clay-good/spec-gen
-cd spec-gen && npm install && npm run build
-```
-
-**2. Generate specs once** (required for drift detection and naming alignment)
-
-```bash
-cd /path/to/your-project
-spec-gen init      # detect project type, create config
-spec-gen generate  # generate OpenSpec specs (requires LLM API key)
-```
-
-**3. Connect your editor**
-
-#### Claude Code
-
-The repo ships a `.mcp.json` -- edit the path and you are done:
+or for local development:
 
 ```json
 {
@@ -535,61 +563,54 @@ The repo ships a `.mcp.json` -- edit the path and you are done:
 }
 ```
 
-The tools are available directly in any Claude Code conversation. Just ask naturally -- Claude calls the right tools automatically:
-
-```
-You:    Analyse my codebase and tell me what needs refactoring most urgently
-Claude: [analyze_codebase -> get_refactor_report -> analyze_impact on top result]
-        -> Project summary, top issues ranked by priority, risk score and recommended
-          strategy for the highest-impact function
-
-You:    Are there any duplicate functions I should consolidate?
-Claude: [get_duplicate_report]
-        -> Clone groups sorted by impact (exact / structural / near), file paths, line ranges
-
-You:    Show me everything that calls parseConfig and draw a diagram
-Claude: [get_subgraph with direction: "upstream", format: "mermaid"]
-        -> Mermaid flowchart of the upstream call chain
-```
+**Cline / Roo Code / Kilocode** -- add the same block under `mcpServers` in the MCP settings JSON of your editor.
 
-#### Cline / Roo Code / Kilocode
+### Cline / Roo Code / Kilocode
 
-Add the same `mcpServers` block in the editor's MCP settings JSON, then install the pre-built slash command workflows:
+For editors with MCP support, after adding the `mcpServers` block to your settings, download the slash command workflows:
 
 ```bash
-cd /path/to/your-project
 mkdir -p .clinerules/workflows
-cp /path/to/spec-gen/examples/cline-workflows/*.md .clinerules/workflows/
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-analyze-codebase.md -o .clinerules/workflows/spec-gen-analyze-codebase.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-check-spec-drift.md -o .clinerules/workflows/spec-gen-check-spec-drift.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-plan-refactor.md -o .clinerules/workflows/spec-gen-plan-refactor.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-execute-refactor.md -o .clinerules/workflows/spec-gen-execute-refactor.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-implement-feature.md -o .clinerules/workflows/spec-gen-implement-feature.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/examples/cline-workflows/spec-gen-refactor-codebase.md -o .clinerules/workflows/spec-gen-refactor-codebase.md
 ```
 
-Type one of the following commands in a conversation:
+Available commands:
 
-| Command | Needs API key | What it does |
-|---------|:---:|-------------|
-| `/spec-gen-analyze-codebase` | No | Architecture overview, call graph highlights, top refactor issues |
-| `/spec-gen-check-spec-drift` | No | Detect code changes not reflected in specs; per-kind remediation guidance |
-| `/spec-gen-plan-refactor` | No | Static analysis -> impact assessment -> written plan saved to `.spec-gen/refactor-plan.md` (no code changes) |
-| `/spec-gen-execute-refactor` | No | Read the plan and apply changes incrementally, with tests and diff verification after each step |
+| Command | What it does |
+|---------|-------------|
+| `/spec-gen-analyze-codebase` | Runs `analyze_codebase`, summarises the results (project type, file count, top 3 refactor issues, detected domains), shows the call graph highlights, and suggests next steps. |
+| `/spec-gen-check-spec-drift` | Runs `check_spec_drift`, presents issues by severity (gap / stale / uncovered / orphaned-spec), shows per-kind remediation commands, and optionally drills into affected file signatures. |
+| `/spec-gen-plan-refactor` | Runs static analysis, picks the highest-priority target with coverage gate, assesses impact and call graph, then writes a detailed plan to `.spec-gen/refactor-plan.md`. No code changes. |
+| `/spec-gen-execute-refactor` | Reads `.spec-gen/refactor-plan.md`, establishes a green baseline, and applies each planned change one at a time -- with diff verification and test run after every step. Optional final step covers dead-code detection and naming alignment (requires `spec-gen generate`). |
+| `/spec-gen-implement-feature` | Plans and implements a new feature with full architectural context: architecture overview, OpenSpec requirements, insertion points, implementation, and drift check. |
+| `/spec-gen-refactor-codebase` | Convenience redirect that runs `/spec-gen-plan-refactor` followed by `/spec-gen-execute-refactor`. |
 
-`analyze_codebase`, `check_spec_drift`, and all refactoring tools run on **pure static analysis** -- no LLM quota consumed. Only `spec-gen generate` (the one-time spec generation step) requires an API key.
+All six commands ask which directory to use, call the MCP tools directly, and guide you through the results without leaving the editor. They work in any editor that supports the `.clinerules/workflows/` convention.
 
-### Cline Slash Commands
+### Claude Skills
 
-`examples/cline-workflows/` contains four executable workflow files. Copy them to your project's `.clinerules/workflows/` to activate them as slash commands:
+For Claude Code, copy the skill files to `.claude/skills/` in your project:
 
 ```bash
-mkdir -p .clinerules/workflows
-cp /path/to/spec-gen/examples/cline-workflows/*.md .clinerules/workflows/
+mkdir -p .claude/skills
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/skills/claude-spec-gen.md -o .claude/skills/claude-spec-gen.md
+curl -sL https://raw.githubusercontent.com/clay-good/spec-gen/main/skills/openspec-skill.md -o .claude/skills/openspec-skill.md
 ```
 
-| Command | What it does |
-|---------|-------------|
-| `/spec-gen-analyze-codebase` | Runs `analyze_codebase`, summarises the results (project type, file count, top 3 refactor issues, detected domains), shows the call graph highlights, and suggests next steps. |
-| `/spec-gen-check-spec-drift` | Runs `check_spec_drift`, presents issues by severity (gap / stale / uncovered / orphaned-spec), shows per-kind remediation commands, and optionally drills into affected file signatures. |
-| `/spec-gen-plan-refactor` | Runs static analysis, picks the highest-priority target with coverage gate, assesses impact and call graph, then writes a detailed plan to `.spec-gen/refactor-plan.md`. No code changes. |
-| `/spec-gen-execute-refactor` | Reads `.spec-gen/refactor-plan.md`, establishes a green baseline, and applies each planned change one at a time -- with diff verification and test run after every step. Optional final step covers dead-code detection and naming alignment (requires `spec-gen generate`). |
+**Spec-Gen Skill** (`claude-spec-gen.md`) — Code archaeology skill that guides Claude through:
+- Project type detection and domain identification
+- Entity extraction, service analysis, API extraction
+- Architecture synthesis and OpenSpec spec generation
 
-All four commands ask which directory to use, call the MCP tools directly, and guide you through the results without leaving the editor. They work in Cline, Roo Code, Kilocode, and any editor that supports the `.clinerules/workflows/` convention.
+**OpenSpec Skill** (`openspec-skill.md`) — Skill for working with OpenSpec specifications:
+- Semantic spec search with `search_specs`
+- List domains with `list_spec_domains`
+- Navigate requirements and scenarios
 
 ### Tools
 
@@ -600,7 +621,7 @@ All tools run on **pure static analysis** -- no LLM quota consumed.
 | Tool | Description | Requires prior analysis |
 |------|-------------|:---:|
 | `analyze_codebase` | Run full static analysis: repo structure, dependency graph, call graph (hub functions, entry points, layer violations), and top refactoring priorities. Results cached for 1 hour (`force: true` to bypass). | No |
-| `get_call_graph` | Hub functions (high fan-in), entry points (no internal callers), and architectural layer violations. Supports TypeScript, JavaScript, Python, Go, Rust, Ruby, Java. | Yes |
+| `get_call_graph` | Hub functions (high fan-in), entry points (no internal callers), and architectural layer violations. Supports TypeScript, JavaScript, Python, Go, Rust, Ruby, Java, C++. | Yes |
 | `get_signatures` | Compact function/class signatures per file. Filter by path substring with `filePattern`. Useful for understanding a module's public API without reading full source. | Yes |
 | `get_duplicate_report` | Detect duplicate code: Type 1 (exact clones), Type 2 (structural -- renamed variables), Type 3 (near-clones with Jaccard similarity >= 0.7). Groups sorted by impact. | Yes |
 
@@ -613,6 +634,7 @@ All tools run on **pure static analysis** -- no LLM quota consumed.
 | `get_low_risk_refactor_candidates` | Safest functions to refactor first: low fan-in, low fan-out, not a hub, no cyclic involvement. Best starting point for incremental, low-risk sessions. | Yes |
 | `get_leaf_functions` | Functions that make no internal calls (leaves of the call graph). Zero downstream blast radius. Sorted by fan-in by default -- most-called leaves have the best unit-test ROI. | Yes |
 | `get_critical_hubs` | Highest-impact hub functions ranked by criticality. Each hub gets a stability score (0-100) and a recommended approach: extract, split, facade, or delegate. | Yes |
+| `get_god_functions` | Detect god functions (high fan-out, likely orchestrators) in the project or in a specific file, and return their call-graph neighborhood. Use this to identify which functions need to be refactored and understand what logical blocks to extract. | Yes |
 
 **Navigation**
 
@@ -630,6 +652,8 @@ All tools run on **pure static analysis** -- no LLM quota consumed.
 |------|-------------|:---:|
 | `get_mapping` | Requirement->function mapping produced by `spec-gen generate`. Shows which functions implement which spec requirements, confidence level, and orphan functions with no spec coverage. | Yes (generate) |
 | `check_spec_drift` | Detect code changes not reflected in OpenSpec specs. Compares git-changed files against spec coverage maps. Issues: gap / stale / uncovered / orphaned-spec / adr-gap. | Yes (generate) |
+| `search_specs` | Semantic search over OpenSpec specifications to find requirements, design notes, and architecture decisions by meaning. Returns linked source files for graph highlighting. Use this when asked "which spec covers X?" or "where should we implement Z?". Requires a spec index built with `spec-gen analyze --embed` or `--reindex-specs`. | Yes (generate) |
+| `list_spec_domains` | List all OpenSpec domains available in this project. Use this to discover what domains exist before doing a targeted `search_specs` call. | Yes (generate) |
 
 ### Parameters
 
@@ -683,6 +707,11 @@ failOn     string    Minimum severity to report: "error" | "warning" | "info" (d
 maxFiles   number    Max changed files to analyze (default: 100)
 ```
 
+**`list_spec_domains`**
+```
+directory  string   Absolute path to the project directory
+```
+
 **`analyze_impact`**
 ```
 directory  string   Absolute path to the project directory
@@ -725,11 +754,19 @@ directory  string   Absolute path to the project directory
 filePath   string   Path to the file, relative to the project directory
 ```
 
+**`get_god_functions`**
+```
+directory        string   Absolute path to the project directory
+filePath         string   Optional: restrict search to this file (relative path)
+fanOutThreshold  number   Minimum fan-out to be considered a god function (default: 8)
+```
+
 **`suggest_insertion_points`**
 ```
-directory  string   Absolute path to the project directory
-query      string   Natural-language description of the feature to implement
-limit      number   Max candidates to return (default: 5)
+directory    string   Absolute path to the project directory
+description  string   Natural-language description of the feature to implement
+limit        number   Max candidates to return (default: 5)
+language     string   Filter by language: "TypeScript" | "Python" | "Go" | ...
 ```
 
 **`search_code`**
@@ -741,6 +778,15 @@ language   string   Filter by language: "TypeScript" | "Python" | "Go" | ...
 minFanIn   number   Only return functions with at least this many callers
 ```
 
+**`search_specs`**
+```
+directory  string   Absolute path to the project directory
+query      string   Natural language query, e.g. "email validation workflow"
+limit      number   Maximum number of results to return (default: 10)
+domain     string   Filter by domain name (e.g. "auth", "analyzer")
+section    string   Filter by section type: "requirements" | "purpose" | "design" | "architecture" | "entities"
+```
+
 ### Typical workflow
 
 **Scenario A -- Initial exploration**
@@ -879,7 +925,7 @@ Static analysis output is stored in `.spec-gen/analysis/`:
 | File | Description |
 |------|-------------|
 | `repo-structure.json` | Project structure and metadata |
-| `dependency-graph.json` | Import/export relationships |
+| `dependency-graph.json` | Import/export relationships and HTTP cross-language edges (JS/TS → Python) |
 | `llm-context.json` | Context prepared for LLM (signatures, call graph) |
 | `dependencies.mermaid` | Visual dependency graph |
 | `SUMMARY.md` | Human-readable analysis summary |
@@ -913,11 +959,14 @@ spec-gen analyze --embed
 {
   "embedding": {
     "baseUrl": "http://localhost:11434/v1",
-    "model": "nomic-embed-text"
+    "model": "nomic-embed-text",
+    "batchSize": 64
   }
 }
 ```
 
+- `batchSize`: Number of texts to embed per API call (default: 64)
+
 The index is stored in `.spec-gen/analysis/vector-index/` and is automatically used by the viewer's search bar and the `search_code` / `suggest_insertion_points` MCP tools.
 
 ## Configuration
@@ -952,6 +1001,9 @@ The index is stored in `.spec-gen/analysis/vector-index/` and is automatically u
 | `OPENAI_COMPAT_API_KEY` | `openai-compat` | API key for OpenAI-compatible server |
 | `OPENAI_COMPAT_BASE_URL` | `openai-compat` | Base URL, e.g. `https://api.mistral.ai/v1` |
 | `GEMINI_API_KEY` | `gemini` | Google Gemini API key |
+| `EMBED_BASE_URL` | embedding | Base URL for the embedding API (e.g. `http://localhost:11434/v1`) |
+| `EMBED_MODEL` | embedding | Embedding model name (e.g. `nomic-embed-text`) |
+| `EMBED_API_KEY` | embedding | API key for the embedding service (defaults to `OPENAI_API_KEY`) |
 | `DEBUG` | -- | Enable stack traces on errors |
 | `CI` | -- | Auto-detected; enables timestamps in output |
 
@@ -977,6 +1029,7 @@ The index is stored in `.spec-gen/analysis/vector-index/` and is automatically u
 | Rust | Full | Full |
 | Ruby | Full | Full |
 | Java | Full | Full |
+| C++ | Full | Full |
 
 TypeScript projects get the best results due to richer type information.
 
@@ -1000,7 +1053,7 @@ spec-gen init && spec-gen analyze && spec-gen generate && spec-gen drift --insta
 spec-gen exposes a typed Node.js API for integration into other tools (like [OpenSpec CLI](https://github.com/Fission-AI/OpenSpec)). Every CLI command has a corresponding API function that returns structured results instead of printing to the console.
 
 ```bash
-npm install spec-gen
+npm install spec-gen-cli
 ```
 
 ```typescript
@@ -1041,11 +1094,44 @@ console.log(`Analyzed ${analysis.repoMap.summary.analyzedFiles} files`);
 | `specGenVerify(options?)` | Verify spec accuracy | Yes |
 | `specGenDrift(options?)` | Detect spec-to-code drift | No* |
 | `specGenRun(options?)` | Full pipeline: init + analyze + generate | Yes |
+| `specGenGetSpecRequirements(options?)` | Read requirement blocks from generated specs | No |
 
 \* `specGenDrift` requires an API key only when `llmEnhanced: true`.
 
 All functions accept an optional `onProgress` callback for status updates and throw errors instead of calling `process.exit`. See [src/api/types.ts](src/api/types.ts) for full option and result type definitions.
 
+### Error handling
+
+All API functions throw `Error` on failure. Wrap calls in try-catch for production use:
+
+```typescript
+import { specGenRun } from 'spec-gen-cli';
+
+try {
+  const result = await specGenRun({ rootPath: '/path/to/project' });
+  console.log(`Done — ${result.generation.report.filesWritten.length} specs written`);
+} catch (err) {
+  if ((err as Error).message.includes('API key')) {
+    console.error('Set ANTHROPIC_API_KEY or OPENAI_API_KEY');
+  } else {
+    console.error('spec-gen failed:', (err as Error).message);
+  }
+}
+```
+
+### Reading generated spec requirements
+
+After running `specGenGenerate`, you can programmatically query the requirement-to-function mapping:
+
+```typescript
+import { specGenGetSpecRequirements } from 'spec-gen-cli';
+
+const { requirements } = await specGenGetSpecRequirements({ rootPath: '/path/to/project' });
+for (const [key, req] of Object.entries(requirements)) {
+  console.log(`${key}: ${req.title} (${req.specFile})`);
+}
+```
+
 ## Examples
 
 | Example | Description |
@@ -1060,11 +1146,11 @@ All functions accept an optional `onProgress` callback for status updates and th
 npm install          # Install dependencies
 npm run dev          # Development mode (watch)
 npm run build        # Build
-npm run test:run     # Run tests (1052 unit tests)
+npm run test:run     # Run tests (1526 unit tests)
 npm run typecheck    # Type check
 ```
 
-1052 unit tests covering static analysis, call graph, refactor analysis, spec mapping, drift detection, LLM enhancement, ADR generation, and the full CLI.
+1526 unit tests covering static analysis, call graph, refactor analysis, spec mapping, drift detection, LLM enhancement, ADR generation, and the full CLI.
 
 ## Links
 

package/dist/api/analyze.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"analyze.d.ts","sourceRoot":"","sources":["../../src/api/analyze.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAQH,OAAO,KAAK,EAAE,iBAAiB,EAAE,aAAa,EAAmC,MAAM,YAAY,CAAC;AAepG;;;;;;;GAOG;AACH,wBAAsB,cAAc,CAAC,OAAO,GAAE,iBAAsB,GAAG,OAAO,CAAC,aAAa,CAAC,CAwF5F"}
+{"version":3,"file":"analyze.d.ts","sourceRoot":"","sources":["../../src/api/analyze.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAaH,OAAO,KAAK,EAAE,iBAAiB,EAAE,aAAa,EAAoB,MAAM,YAAY,CAAC;AAiCrF;;;;;;;GAOG;AACH,wBAAsB,cAAc,CAAC,OAAO,GAAE,iBAAsB,GAAG,OAAO,CAAC,aAAa,CAAC,CA4H5F"}

package/dist/api/analyze.js

@@ -5,22 +5,33 @@
  * No side effects (no process.exit, no console.log).
  */
 import { join } from 'node:path';
-import { access, stat, mkdir, writeFile } from 'node:fs/promises';
+import { readFile, stat, mkdir, writeFile } from 'node:fs/promises';
+import { ANALYSIS_STALE_THRESHOLD_MS, DEFAULT_MAX_FILES, SPEC_GEN_ANALYSIS_REL_PATH, ARTIFACT_REPO_STRUCTURE, ARTIFACT_DEPENDENCY_GRAPH, ARTIFACT_LLM_CONTEXT } from '../constants.js';
+import { fileExists, readJsonFile } from '../utils/command-helpers.js';
 import { readSpecGenConfig } from '../core/services/config-manager.js';
 import { RepositoryMapper } from '../core/analyzer/repository-mapper.js';
-import { DependencyGraphBuilder } from '../core/analyzer/dependency-graph.js';
-import { AnalysisArtifactGenerator } from '../core/analyzer/artifact-generator.js';
+import { DependencyGraphBuilder, } from '../core/analyzer/dependency-graph.js';
+import { AnalysisArtifactGenerator, repoStructureToRepoMap } from '../core/analyzer/artifact-generator.js';
 function progress(onProgress, step, status, detail) {
     onProgress?.({ phase: 'analyze', step, status, detail });
 }
-async function fileExists(path) {
+/**
+ * Load cached analysis artifacts from disk.
+ * All four artifact files are saved by AnalysisArtifactGenerator.generateAndSave().
+ */
+async function loadCachedArtifacts(outputPath, repoStructure) {
+    const llmContext = await readJsonFile(join(outputPath, ARTIFACT_LLM_CONTEXT), ARTIFACT_LLM_CONTEXT) ?? { phase1_survey: { purpose: '', files: [] }, phase2_deep: { purpose: '', files: [] }, phase3_validation: { purpose: '', files: [] } };
+    let summaryMarkdown = '';
+    let dependencyDiagram = '';
     try {
-        await access(path);
-        return true;
+        summaryMarkdown = await readFile(join(outputPath, 'SUMMARY.md'), 'utf-8');
     }
-    catch {
-        return false;
+    catch { /* optional */ }
+    try {
+        dependencyDiagram = await readFile(join(outputPath, 'dependencies.mermaid'), 'utf-8');
     }
+    catch { /* optional */ }
+    return { repoStructure, summaryMarkdown, dependencyDiagram, llmContext };
 }
 /**
  * Run static analysis on the codebase.
@@ -33,10 +44,11 @@ async function fileExists(path) {
 export async function specGenAnalyze(options = {}) {
     const startTime = Date.now();
     const rootPath = options.rootPath ?? process.cwd();
-    const maxFiles = options.maxFiles ?? 500;
+    const maxFiles = options.maxFiles ?? DEFAULT_MAX_FILES;
     const excludePatterns = options.excludePatterns ?? [];
+    const includePatterns = options.includePatterns ?? [];
     const force = options.force ?? false;
-    const outputRelPath = options.outputPath ?? '.spec-gen/analysis/';
+    const outputRelPath = options.outputPath ?? `${SPEC_GEN_ANALYSIS_REL_PATH}/`;
     const outputPath = join(rootPath, outputRelPath);
     const { onProgress } = options;
     // Validate config exists
@@ -46,31 +58,47 @@ export async function specGenAnalyze(options = {}) {
     }
     // Check for existing recent analysis
     if (!force) {
-        const repoStructurePath = join(outputPath, 'repo-structure.json');
+        const repoStructurePath = join(outputPath, ARTIFACT_REPO_STRUCTURE);
         if (await fileExists(repoStructurePath)) {
             const stats = await stat(repoStructurePath);
             const age = Date.now() - stats.mtime.getTime();
-            const oneHour = 60 * 60 * 1000;
-            if (age < oneHour) {
+            if (age < ANALYSIS_STALE_THRESHOLD_MS) {
                 progress(onProgress, 'Recent analysis exists', 'skip', `${Math.floor(age / 60000)} minutes old`);
                 // Load and return existing analysis
-                const { readFile } = await import('node:fs/promises');
-                const repoStructureContent = await readFile(repoStructurePath, 'utf-8');
-                const repoStructure = JSON.parse(repoStructureContent);
-                const depGraphPath = join(outputPath, 'dependency-graph.json');
-                let depGraph;
-                if (await fileExists(depGraphPath)) {
-                    const depGraphContent = await readFile(depGraphPath, 'utf-8');
-                    depGraph = JSON.parse(depGraphContent);
+                const repoStructure = await readJsonFile(repoStructurePath, ARTIFACT_REPO_STRUCTURE);
+                if (!repoStructure) {
+                    throw new Error(`Failed to load ${ARTIFACT_REPO_STRUCTURE} — run spec-gen analyze --force to regenerate`);
                 }
+                const depGraph = await readJsonFile(join(outputPath, ARTIFACT_DEPENDENCY_GRAPH), ARTIFACT_DEPENDENCY_GRAPH) ?? undefined;
                 return {
-                    repoMap: repoStructure,
+                    repoMap: repoStructureToRepoMap(repoStructure),
                     depGraph: depGraph ?? {
-                        nodes: [], edges: [], clusters: [], cycles: [],
-                        rankings: { byImportance: [], byConnectivity: [], clusterCenters: [], leafNodes: [], bridgeNodes: [], orphanNodes: [] },
-                        statistics: { nodeCount: 0, edgeCount: 0, clusterCount: 0, cycleCount: 0, avgDegree: 0, density: 0 },
+                        nodes: [],
+                        edges: [],
+                        clusters: [],
+                        cycles: [],
+                        structuralClusters: [],
+                        rankings: {
+                            byImportance: [],
+                            byConnectivity: [],
+                            clusterCenters: [],
+                            leafNodes: [],
+                            bridgeNodes: [],
+                            orphanNodes: [],
+                        },
+                        statistics: {
+                            nodeCount: 0,
+                            edgeCount: 0,
+                            importEdgeCount: 0,
+                            httpEdgeCount: 0,
+                            clusterCount: 0,
+                            cycleCount: 0,
+                            avgDegree: 0,
+                            density: 0,
+                            structuralClusterCount: 0,
+                        },
                     },
-                    artifacts: { repoStructure },
+                    artifacts: await loadCachedArtifacts(outputPath, repoStructure),
                     duration: Date.now() - startTime,
                 };
             }
@@ -83,6 +111,7 @@ export async function specGenAnalyze(options = {}) {
     const mapper = new RepositoryMapper(rootPath, {
         maxFiles,
         excludePatterns: excludePatterns.length > 0 ? excludePatterns : undefined,
+        includePatterns: includePatterns.length > 0 ? includePatterns : undefined,
     });
     const repoMap = await mapper.map();
     progress(onProgress, 'Scanning directory structure', 'complete', `${repoMap.summary.analyzedFiles} files`);
@@ -101,7 +130,7 @@ export async function specGenAnalyze(options = {}) {
     });
     const artifacts = await artifactGenerator.generateAndSave(repoMap, depGraph);
     // Save dependency graph
-    await writeFile(join(outputPath, 'dependency-graph.json'), JSON.stringify(depGraph, null, 2));
+    await writeFile(join(outputPath, ARTIFACT_DEPENDENCY_GRAPH), JSON.stringify(depGraph, null, 2));
     progress(onProgress, 'Generating analysis artifacts', 'complete');
     const duration = Date.now() - startTime;
     return { repoMap, depGraph, artifacts, duration };

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package/dist/api/drift.d.ts.map

@@ -1 +1 @@
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