skill-flow 1.0.4 → 1.0.6

package/README.md

@@ -16,7 +16,7 @@ As your AI agent skills grow, management gets messy: one Git repo has a bunch of
 
 ## Key Features
 
-![Skill groups diagram](./img/skill-groups-diagram.png)
+![Skill groups diagram](./img/img-2.png)
 
 **Skill-Based Grouping**
 One Git repo = one skills group. Related skills stay together, updates and maintenance happen at the group level.
@@ -87,7 +87,7 @@ skill-flow uninstall my-source-id
 
 `add <source>` supports local paths, `owner/repo`, full https/ssh Git URLs, GitHub tree URLs, and `clawhub:<slug>[@version]`.
 
-By default, `add` preselects all discovered skills and all detected agent targets. When `--path <repoSubpath>` is provided, the full repo is still imported, but only skills under that path are preselected.
+By default, `add` preselects all discovered skills and all detected agent targets. When `--path <repoSubpath>` is provided, the full repo is still imported, but only skills under that path are preselected. `--path` values are normalized, so `./skills/` and `skills/` behave the same, and the CLI prints a preselection warning when the import only scopes the default selection.
 
 Examples:
 

package/README.zh.md

@@ -15,7 +15,7 @@
 `skill-flow` 用 Skill 视角重新组织管理：以 Github 仓库作为 Skill 分组依据，选择部署目标，统一更新，快速诊断问题。让 Skill 管理清晰、可控、高效。
 
 ## 核心特性
-![Skill 分组关系图](./img/skill-groups-diagram.png)
+![Skill 分组关系图](./img/img-2.png)
 
 **Skill 分组管理**
 一个 Github 仓库 = 一个 Skill 分组。相关 Skills 保持在一起，更新和维护以分组为单位进行。

package/dist/adapters/channel-adapters.js

@@ -1,5 +1,5 @@
 import path from "node:path";
-import { TARGET_DEFINITIONS, } from "../utils/constants.js";
+import { getTargetDetectionCandidates, TARGET_DEFINITIONS, } from "../utils/constants.js";
 import { pathExists } from "../utils/fs.js";
 class DefaultChannelAdapter {
     target;
@@ -11,8 +11,16 @@ class DefaultChannelAdapter {
     async detect() {
         const definition = TARGET_DEFINITIONS[this.target];
         const envVar = definition.envVar;
-        const override = process.env[envVar];
-        const candidates = override ? [override] : definition.writeRootCandidates;
+        const candidates = getTargetDetectionCandidates(this.target);
+        if (candidates.length === 0) {
+            return {
+                target: this.target,
+                strategy: this.strategy,
+                available: false,
+                rootPath: path.resolve("."),
+                reason: `Target is disabled in explicit target mode. Set ${envVar} to enable it.`,
+            };
+        }
         for (const candidate of candidates) {
             const rootPath = path.resolve(candidate);
             if (await pathExists(rootPath)) {

package/dist/adapters/channel-adapters.js.map

@@ -1 +1 @@
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+{"version":3,"file":"channel-adapters.js","sourceRoot":"","sources":["../../src/adapters/channel-adapters.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAO7B,OAAO,EACL,4BAA4B,EAC5B,kBAAkB,GACnB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAS5C,MAAM,qBAAqB;IAGJ;IAFZ,QAAQ,CAAqB;IAEtC,YAAqB,MAA4B;QAA5B,WAAM,GAAN,MAAM,CAAsB;QAC/C,IAAI,CAAC,QAAQ,GAAG,kBAAkB,CAAC,MAAM,CAAC,CAAC,QAAQ,CAAC;IACtD,CAAC;IAED,KAAK,CAAC,MAAM;QACV,MAAM,UAAU,GAAG,kBAAkB,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;QACnD,MAAM,MAAM,GAAG,UAAU,CAAC,MAAM,CAAC;QACjC,MAAM,UAAU,GAAG,4BAA4B,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;QAE7D,IAAI,UAAU,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC5B,OAAO;gBACL,MAAM,EAAE,IAAI,CAAC,MAAM;gBACnB,QAAQ,EAAE,IAAI,CAAC,QAAQ;gBACvB,SAAS,EAAE,KAAK;gBAChB,QAAQ,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC;gBAC3B,MAAM,EAAE,mDAAmD,MAAM,gBAAgB;aAClF,CAAC;QACJ,CAAC;QAED,KAAK,MAAM,SAAS,IAAI,UAAU,EAAE,CAAC;YACnC,MAAM,QAAQ,GAAG,IAAI,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC;YACzC,IAAI,MAAM,UAAU,CAAC,QAAQ,CAAC,EAAE,CAAC;gBAC/B,OAAO;oBACL,MAAM,EAAE,IAAI,CAAC,MAAM;oBACnB,QAAQ,EAAE,IAAI,CAAC,QAAQ;oBACvB,SAAS,EAAE,IAAI;oBACf,QAAQ;iBACT,CAAC;YACJ,CAAC;QACH,CAAC;QAED,OAAO;YACL,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,QAAQ,EAAE,IAAI,CAAC,QAAQ;YACvB,SAAS,EAAE,KAAK;YAChB,QAAQ,EAAE,IAAI,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,CAAC,IAAI,GAAG,CAAC;YAC5C,MAAM,EAAE,mCAAmC,MAAM,uCAAuC;SACzF,CAAC;IACJ,CAAC;IAED,iBAAiB,CAAC,QAAgB,EAAE,QAAgB;QAClD,OAAO,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IACvC,CAAC;CACF;AAED,MAAM,UAAU,qBAAqB;IACnC,OAAO;QACL,IAAI,qBAAqB,CAAC,aAAa,CAAC;QACxC,IAAI,qBAAqB,CAAC,OAAO,CAAC;QAClC,IAAI,qBAAqB,CAAC,QAAQ,CAAC;QACnC,IAAI,qBAAqB,CAAC,gBAAgB,CAAC;QAC3C,IAAI,qBAAqB,CAAC,YAAY,CAAC;QACvC,IAAI,qBAAqB,CAAC,UAAU,CAAC;QACrC,IAAI,qBAAqB,CAAC,UAAU,CAAC;QACrC,IAAI,qBAAqB,CAAC,IAAI,CAAC;QAC/B,IAAI,qBAAqB,CAAC,UAAU,CAAC;QACrC,IAAI,qBAAqB,CAAC,UAAU,CAAC;QACrC,IAAI,qBAAqB,CAAC,OAAO,CAAC;QAClC,IAAI,qBAAqB,CAAC,KAAK,CAAC;QAChC,IAAI,qBAAqB,CAAC,MAAM,CAAC;KAClC,CAAC;AACJ,CAAC"}

package/dist/cli.js

@@ -2,31 +2,43 @@
 import { jsx as _jsx } from "react/jsx-runtime";
 import { Command } from "commander";
 import { render } from "ink";
+import packageJson from "../package.json" with { type: "json" };
 import { SkillFlowApp } from "./services/skill-flow.js";
 import { ConfigBootstrapApp } from "./tui/config-app.js";
 import { FindApp } from "./tui/find-app.js";
 import { formatGroupRef } from "./utils/naming.js";
-import { formatDoctorIssue, formatWorkflowList, } from "./utils/format.js";
+import { formatActionSummary, formatDoctorIssue, formatWorkflowList, } from "./utils/format.js";
+import { resolveAddSourceLocator } from "./utils/cli.js";
 import { buildFindCommand } from "./utils/find-command.js";
 const program = new Command();
 const app = new SkillFlowApp();
 program
     .name("skill-flow")
     .description("Workflow-first skill projection manager")
-    .version("1.0.3");
+    .version(packageJson.version);
 program
     .command("add")
     .argument("<source>", "Source locator")
     .option("--path <repoSubpath>", "Filter Git sources to a specific repo subpath")
+    .option("--from <catalog>", "Interpret source using a named catalog")
     .action(async (source, options) => {
-    const result = await app.addSource(source, options.path ? { path: options.path } : undefined);
+    let resolvedSource;
+    try {
+        resolvedSource = resolveAddSourceLocator(source, options.from);
+    }
+    catch (error) {
+        printErrors([{ message: error instanceof Error ? error.message : String(error) }]);
+        process.exitCode = 1;
+        return;
+    }
+    const result = await app.addSource(resolvedSource, options.path ? { path: options.path } : undefined);
     if (!result.ok) {
         printErrors(result.errors);
         process.exitCode = 1;
         return;
     }
-    const duplicateSkipCount = result.warnings.filter((warning) => warning.message.includes("Duplicate skill content skipped because")).length;
-    const visibleWarnings = result.warnings.filter((warning) => !warning.message.includes("Duplicate skill content skipped because"));
+    const duplicateSkipCount = result.warnings.filter((warning) => warning.code === "DUPLICATE_LEAF").length;
+    const visibleWarnings = result.warnings.filter((warning) => warning.code !== "DUPLICATE_LEAF");
     const duplicateSummary = duplicateSkipCount > 0
         ? `, skipped ${duplicateSkipCount} duplicate skill${duplicateSkipCount === 1 ? "" : "s"}`
         : "";
@@ -59,7 +71,6 @@ program
             ...candidate,
             nextCommand: buildFindCommand(candidate),
         })), null, 2));
-        printWarnings(result.warnings.map((warning) => warning.message));
         return;
     }
     const instance = render(_jsx(FindApp, { app: app, query: query }));
@@ -69,6 +80,38 @@ program.command("config").action(async () => {
     const instance = render(_jsx(ConfigBootstrapApp, { app: app }));
     await instance.waitUntilExit();
 });
+program
+    .command("repair-source")
+    .argument("[sourceId]", "Optional skills group id")
+    .option("--all", "Repair owned source checkouts for all registered skills groups")
+    .action(async (sourceId, options) => {
+    const ids = options.all || !sourceId ? undefined : [sourceId];
+    const result = await app.repairSource(ids);
+    if (!result.ok) {
+        printErrors(result.errors);
+        process.exitCode = 1;
+        return;
+    }
+    for (const item of result.data.updated) {
+        console.log(`${item.sourceId}  changed:${item.changed}  +${item.addedLeafIds.length}  -${item.removedLeafIds.length}  invalidated:${item.invalidatedLeafIds.length}`);
+    }
+    printWarnings(result.warnings.map((warning) => warning.message));
+});
+program
+    .command("repair-state")
+    .argument("[sourceId]", "Optional skills group id")
+    .option("--all", "Rebuild source-side state for all registered skills groups")
+    .action(async (sourceId, options) => {
+    const ids = options.all || !sourceId ? undefined : [sourceId];
+    const result = await app.repairState(ids);
+    if (!result.ok) {
+        printErrors(result.errors);
+        process.exitCode = 1;
+        return;
+    }
+    console.log(`repaired sources:${result.data.repairedSourceIds.length}  removed deployments:${result.data.removedDeploymentCount}`);
+    printWarnings(result.warnings.map((warning) => warning.message));
+});
 program
     .command("update")
     .argument("[sourceId]", "Optional skills group id")
@@ -90,6 +133,21 @@ program
     }
     printWarnings(result.warnings.map((warning) => warning.message));
 });
+program
+    .command("repair-targets")
+    .argument("[sourceId]", "Optional skills group id")
+    .option("--all", "Repair targets for all registered skills groups")
+    .action(async (sourceId, options) => {
+    const ids = options.all || !sourceId ? undefined : [sourceId];
+    const result = await app.repairTargets(ids);
+    if (!result.ok) {
+        printErrors(result.errors);
+        process.exitCode = 1;
+        return;
+    }
+    console.log(formatActionSummary(result.data.actions));
+    printWarnings(result.warnings.map((warning) => warning.message));
+});
 program.command("doctor").action(async () => {
     const result = await app.doctor();
     if (!result.ok) {

package/dist/cli.js.map

@@ -1 +1 @@
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package/dist/domain/types.d.ts

@@ -39,6 +39,10 @@ export type TargetBinding = {
 export type SourceBinding = {
     targets: Partial<Record<DeploymentTargetName, TargetBinding>>;
 };
+export type DraftBinding = {
+    enabledTargets: DeploymentTargetName[];
+    selectedLeafIds: string[];
+};
 export type Manifest = {
     schemaVersion: 1;
     sources: SourceManifestRecord[];
@@ -48,6 +52,10 @@ export type InvalidLeafRecord = {
     path: string;
     reason: string;
 };
+export type DuplicateLeafRecord = {
+    path: string;
+    keptPath: string;
+};
 export type SourceLockRecord = {
     id: string;
     locator: string;
@@ -96,6 +104,31 @@ export type LockFile = {
     leafInventory: LeafRecord[];
     deployments: DeploymentRecord[];
 };
+export type SourceUpdateDiffKind = "added" | "removed" | "moved" | "invalidated" | "changed";
+export type SourceUpdateDiff = {
+    kind: SourceUpdateDiffKind;
+    sourceId: string;
+    leafId: string;
+    relativePath: string;
+    contentHash: string;
+    requestedPath?: string;
+    previousLeafId?: string;
+    previousRelativePath?: string;
+    previousContentHash?: string;
+};
+export type SourceUpdateResultItem = {
+    sourceId: string;
+    changed: boolean;
+    requestedPath?: string;
+    selectionMode?: "all" | "partial";
+    addedLeafIds: string[];
+    removedLeafIds: string[];
+    invalidatedLeafIds: string[];
+    diffs: SourceUpdateDiff[];
+};
+export type SourceUpdateResult = {
+    updated: SourceUpdateResultItem[];
+};
 export type ChannelDetection = {
     target: DeploymentTargetName;
     strategy: DeploymentStrategy;
@@ -137,6 +170,15 @@ export type DoctorReport = {
     status: "HEALTHY" | "PARTIAL" | "BLOCKED";
     issues: DoctorIssue[];
 };
+export type ConfigBootFailure = {
+    sourceId: string;
+    message: string;
+};
+export type ConfigBootStatus = {
+    phase: "success" | "partial_failure";
+    updatedSourceIds: string[];
+    failedSources: ConfigBootFailure[];
+};
 export type WorkflowSummary = {
     source: SourceManifestRecord;
     lock: SourceLockRecord | undefined;

package/dist/services/config-coordinator.d.ts

@@ -0,0 +1,38 @@
+import type { ConfigBootStatus, DeploymentTargetName, DoctorReport, DraftBinding, LockFile, Manifest, Result, WorkflowSummary } from "../domain/types.js";
+import type { BootstrapEvent } from "./workspace-bootstrap-service.js";
+type ConfigCoordinatorDeps = {
+    store: {
+        init(): Promise<void>;
+        readManifest(): Promise<Manifest>;
+    };
+    doctorService: {
+        run(manifest: Manifest, lockFile: LockFile): Promise<Result<DoctorReport>>;
+    };
+    workflowService: {
+        getSummaries(manifest: Manifest, lockFile: LockFile, audit?: DoctorReport): WorkflowSummary[];
+    };
+    getAvailableTargets(): Promise<DeploymentTargetName[]>;
+    pruneMissingCheckouts(): Promise<Result<{
+        removedSourceIds: string[];
+    }>>;
+    getConfigData(): Promise<Result<{
+        manifest: Manifest;
+        lockFile: LockFile;
+        summaries: WorkflowSummary[];
+    }>>;
+};
+export type ConfigBootstrapData = {
+    availableTargets: DeploymentTargetName[];
+    manifest: Manifest;
+    lockFile: LockFile;
+    summaries: WorkflowSummary[];
+    initialDrafts: Record<string, DraftBinding>;
+    audit: DoctorReport;
+    bootStatus: ConfigBootStatus;
+};
+export declare class ConfigCoordinator {
+    private readonly deps;
+    constructor(deps: ConfigCoordinatorDeps);
+    bootstrapWorkspaceState(onEvent?: (event: BootstrapEvent) => void): Promise<Result<ConfigBootstrapData>>;
+}
+export {};

package/dist/services/config-coordinator.js

@@ -0,0 +1,81 @@
+import { fail, ok } from "../utils/result.js";
+export class ConfigCoordinator {
+    deps;
+    constructor(deps) {
+        this.deps = deps;
+    }
+    async bootstrapWorkspaceState(onEvent) {
+        onEvent?.({
+            phase: "detect-targets",
+            level: "info",
+            message: "Detecting available agent targets...",
+        });
+        const availableTargets = await this.deps.getAvailableTargets();
+        const pruned = await this.deps.pruneMissingCheckouts();
+        if (!pruned.ok) {
+            return fail(pruned.errors, pruned.warnings);
+        }
+        if (pruned.data.removedSourceIds.length > 0) {
+            onEvent?.({
+                phase: "refresh-sources",
+                level: "warning",
+                message: `Removed ${pruned.data.removedSourceIds.length} missing group${pruned.data.removedSourceIds.length === 1 ? "" : "s"} from config state.`,
+            });
+        }
+        onEvent?.({
+            phase: "normalize-bindings",
+            level: "info",
+            message: "Loading config state...",
+        });
+        const configData = await this.deps.getConfigData();
+        if (!configData.ok) {
+            return fail(configData.errors, configData.warnings);
+        }
+        onEvent?.({
+            phase: "audit-projections",
+            level: "info",
+            message: "Auditing current projections...",
+        });
+        const audit = await this.deps.doctorService.run(configData.data.manifest, configData.data.lockFile);
+        if (!audit.ok) {
+            return fail(audit.errors, audit.warnings);
+        }
+        onEvent?.({
+            phase: "build-summaries",
+            level: "info",
+            message: "Building config summaries...",
+        });
+        const summaries = this.deps.workflowService.getSummaries(configData.data.manifest, configData.data.lockFile, audit.data);
+        const bootStatus = {
+            phase: "success",
+            updatedSourceIds: [],
+            failedSources: [],
+        };
+        onEvent?.({
+            phase: "done",
+            level: "success",
+            message: "Config bootstrap complete.",
+        });
+        return ok({
+            availableTargets,
+            manifest: configData.data.manifest,
+            lockFile: configData.data.lockFile,
+            summaries,
+            initialDrafts: buildInitialDrafts(summaries),
+            audit: audit.data,
+            bootStatus,
+        });
+    }
+}
+function buildInitialDrafts(summaries) {
+    return Object.fromEntries(summaries.map((summary) => {
+        const enabledTargets = Object.entries(summary.bindings.targets)
+            .filter(([, value]) => value?.enabled)
+            .map(([target]) => target);
+        const selectedLeafIds = [
+            ...new Set(enabledTargets.flatMap((target) => summary.bindings.targets[target]?.leafIds ?? [])),
+        ];
+        return [summary.source.id, { enabledTargets, selectedLeafIds }];
+    }));
+}
+//# sourceMappingURL=config-coordinator.js.map

package/dist/services/config-coordinator.js.map

@@ -0,0 +1 @@
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package/dist/services/doctor-service.d.ts

@@ -2,4 +2,6 @@ import type { DoctorReport, LockFile, Manifest, Result } from "../domain/types.j
 export declare class DoctorService {
     private readonly adapters;
     run(manifest: Manifest, lockFile: LockFile): Promise<Result<DoctorReport>>;
+    private getLeafPath;
+    private reportUnmanagedExternalSkills;
 }

package/dist/services/doctor-service.js

@@ -1,3 +1,4 @@
+import path from "node:path";
 import fs from "node:fs/promises";
 import { createChannelAdapters } from "../adapters/channel-adapters.js";
 import { hashDirectory, isBrokenSymlink, pathExists } from "../utils/fs.js";
@@ -9,6 +10,8 @@ export class DoctorService {
         const issues = [];
         for (const source of manifest.sources) {
             const binding = manifest.bindings[source.id] ?? { targets: {} };
+            const sourceLock = lockFile.sources.find((item) => item.id === source.id);
+            const invalidLeafPaths = new Set(sourceLock?.invalidLeafs.map((leaf) => leaf.path) ?? []);
             for (const adapter of this.adapters) {
                 const configured = binding.targets[adapter.target];
                 if (!configured?.enabled) {
@@ -27,6 +30,20 @@ export class DoctorService {
                     continue;
                 }
                 for (const leafId of configured.leafIds) {
+                    const selectedPath = this.getLeafPath(source.id, leafId);
+                    if (selectedPath && invalidLeafPaths.has(selectedPath)) {
+                        issues.push({
+                            severity: "error",
+                            sourceId: source.id,
+                            sourceLabel: formatGroupLabel(source),
+                            target: adapter.target,
+                            leafId,
+                            leafLabel: path.basename(selectedPath) || selectedPath,
+                            code: "INVALIDATED_SELECTED_LEAF",
+                            message: "This selected skill is invalid in the current source inventory.",
+                        });
+                        continue;
+                    }
                     const leaf = lockFile.leafInventory.find((item) => item.id === leafId);
                     const deployment = lockFile.deployments.find((item) => item.sourceId === source.id &&
                         item.leafId === leafId &&
@@ -116,6 +133,7 @@ export class DoctorService {
                 }
             }
         }
+        await this.reportUnmanagedExternalSkills(lockFile, issues);
         for (const deployment of lockFile.deployments) {
             const sourceStillExists = manifest.sources.some((source) => source.id === deployment.sourceId);
             if (!sourceStillExists) {
@@ -138,5 +156,49 @@ export class DoctorService {
                 : "HEALTHY";
         return ok({ status, issues });
     }
+    getLeafPath(sourceId, leafId) {
+        const prefix = `${sourceId}:`;
+        if (!leafId.startsWith(prefix)) {
+            return undefined;
+        }
+        return leafId.slice(prefix.length);
+    }
+    async reportUnmanagedExternalSkills(lockFile, issues) {
+        const managedTargetPaths = new Set(lockFile.deployments.map((deployment) => path.resolve(deployment.targetPath)));
+        const seenPaths = new Set();
+        for (const adapter of this.adapters) {
+            const detection = await adapter.detect();
+            if (!detection.available) {
+                continue;
+            }
+            const entries = await fs.readdir(detection.rootPath, { withFileTypes: true });
+            for (const entry of entries) {
+                const skillDir = path.join(detection.rootPath, entry.name);
+                const isDirectoryLike = entry.isDirectory() ||
+                    (entry.isSymbolicLink() &&
+                        (await fs.stat(skillDir).then((stats) => stats.isDirectory()).catch(() => false)));
+                if (!isDirectoryLike) {
+                    continue;
+                }
+                if (!(await pathExists(path.join(skillDir, "SKILL.md")))) {
+                    continue;
+                }
+                const resolvedPath = await fs.realpath(skillDir).catch(() => path.resolve(skillDir));
+                if (managedTargetPaths.has(path.resolve(skillDir)) || seenPaths.has(resolvedPath)) {
+                    continue;
+                }
+                seenPaths.add(resolvedPath);
+                issues.push({
+                    severity: "warning",
+                    sourceId: `unmanaged:${adapter.target}:${entry.name}`,
+                    sourceLabel: "Unmanaged external skill",
+                    target: adapter.target,
+                    leafLabel: entry.name,
+                    code: "UNMANAGED_EXTERNAL_TARGET_SKILL",
+                    message: `Unmanaged skill discovered at ${resolvedPath}.`,
+                });
+            }
+        }
+    }
 }
 //# sourceMappingURL=doctor-service.js.map

package/dist/services/doctor-service.js.map

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package/dist/services/inventory-service.d.ts

@@ -1,12 +1,15 @@
-import type { InvalidLeafRecord, LeafRecord } from "../domain/types.js";
+import type { DuplicateLeafRecord, InvalidLeafRecord, LeafRecord } from "../domain/types.js";
 type InventoryScan = {
     leafs: LeafRecord[];
     invalidLeafs: InvalidLeafRecord[];
+    duplicateLeafs: DuplicateLeafRecord[];
+    skillFileCount: number;
 };
 export declare class InventoryService {
     private static readonly IGNORED_DIRECTORIES;
     scanSource(sourceId: string, checkoutPath: string, rootLinkName?: string): Promise<InventoryScan>;
     private findSkillFiles;
+    private walkSkillTree;
     private parseSkillFile;
     private dedupeCandidates;
     private parseFrontmatter;