skill-flow 1.0.3 → 1.0.5

package/dist/services/doctor-service.d.ts

@@ -2,4 +2,6 @@ import type { DoctorReport, LockFile, Manifest, Result } from "../domain/types.j
 export declare class DoctorService {
     private readonly adapters;
     run(manifest: Manifest, lockFile: LockFile): Promise<Result<DoctorReport>>;
+    private getLeafPath;
+    private reportUnmanagedExternalSkills;
 }

package/dist/services/doctor-service.js

@@ -1,3 +1,4 @@
+import path from "node:path";
 import fs from "node:fs/promises";
 import { createChannelAdapters } from "../adapters/channel-adapters.js";
 import { hashDirectory, isBrokenSymlink, pathExists } from "../utils/fs.js";
@@ -9,6 +10,8 @@ export class DoctorService {
         const issues = [];
         for (const source of manifest.sources) {
             const binding = manifest.bindings[source.id] ?? { targets: {} };
+            const sourceLock = lockFile.sources.find((item) => item.id === source.id);
+            const invalidLeafPaths = new Set(sourceLock?.invalidLeafs.map((leaf) => leaf.path) ?? []);
             for (const adapter of this.adapters) {
                 const configured = binding.targets[adapter.target];
                 if (!configured?.enabled) {
@@ -27,6 +30,20 @@ export class DoctorService {
                     continue;
                 }
                 for (const leafId of configured.leafIds) {
+                    const selectedPath = this.getLeafPath(source.id, leafId);
+                    if (selectedPath && invalidLeafPaths.has(selectedPath)) {
+                        issues.push({
+                            severity: "error",
+                            sourceId: source.id,
+                            sourceLabel: formatGroupLabel(source),
+                            target: adapter.target,
+                            leafId,
+                            leafLabel: path.basename(selectedPath) || selectedPath,
+                            code: "INVALIDATED_SELECTED_LEAF",
+                            message: "This selected skill is invalid in the current source inventory.",
+                        });
+                        continue;
+                    }
                     const leaf = lockFile.leafInventory.find((item) => item.id === leafId);
                     const deployment = lockFile.deployments.find((item) => item.sourceId === source.id &&
                         item.leafId === leafId &&
@@ -116,6 +133,7 @@ export class DoctorService {
                 }
             }
         }
+        await this.reportUnmanagedExternalSkills(lockFile, issues);
         for (const deployment of lockFile.deployments) {
             const sourceStillExists = manifest.sources.some((source) => source.id === deployment.sourceId);
             if (!sourceStillExists) {
@@ -138,5 +156,49 @@ export class DoctorService {
                 : "HEALTHY";
         return ok({ status, issues });
     }
+    getLeafPath(sourceId, leafId) {
+        const prefix = `${sourceId}:`;
+        if (!leafId.startsWith(prefix)) {
+            return undefined;
+        }
+        return leafId.slice(prefix.length);
+    }
+    async reportUnmanagedExternalSkills(lockFile, issues) {
+        const managedTargetPaths = new Set(lockFile.deployments.map((deployment) => path.resolve(deployment.targetPath)));
+        const seenPaths = new Set();
+        for (const adapter of this.adapters) {
+            const detection = await adapter.detect();
+            if (!detection.available) {
+                continue;
+            }
+            const entries = await fs.readdir(detection.rootPath, { withFileTypes: true });
+            for (const entry of entries) {
+                const skillDir = path.join(detection.rootPath, entry.name);
+                const isDirectoryLike = entry.isDirectory() ||
+                    (entry.isSymbolicLink() &&
+                        (await fs.stat(skillDir).then((stats) => stats.isDirectory()).catch(() => false)));
+                if (!isDirectoryLike) {
+                    continue;
+                }
+                if (!(await pathExists(path.join(skillDir, "SKILL.md")))) {
+                    continue;
+                }
+                const resolvedPath = await fs.realpath(skillDir).catch(() => path.resolve(skillDir));
+                if (managedTargetPaths.has(path.resolve(skillDir)) || seenPaths.has(resolvedPath)) {
+                    continue;
+                }
+                seenPaths.add(resolvedPath);
+                issues.push({
+                    severity: "warning",
+                    sourceId: `unmanaged:${adapter.target}:${entry.name}`,
+                    sourceLabel: "Unmanaged external skill",
+                    target: adapter.target,
+                    leafLabel: entry.name,
+                    code: "UNMANAGED_EXTERNAL_TARGET_SKILL",
+                    message: `Unmanaged skill discovered at ${resolvedPath}.`,
+                });
+            }
+        }
+    }
 }
 //# sourceMappingURL=doctor-service.js.map

package/dist/services/doctor-service.js.map

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package/dist/services/inventory-service.d.ts

@@ -1,7 +1,9 @@
-import type { InvalidLeafRecord, LeafRecord } from "../domain/types.js";
+import type { DuplicateLeafRecord, InvalidLeafRecord, LeafRecord } from "../domain/types.js";
 type InventoryScan = {
     leafs: LeafRecord[];
     invalidLeafs: InvalidLeafRecord[];
+    duplicateLeafs: DuplicateLeafRecord[];
+    skillFileCount: number;
 };
 export declare class InventoryService {
     private static readonly IGNORED_DIRECTORIES;

package/dist/services/inventory-service.js

@@ -10,6 +10,7 @@ export class InventoryService {
         const skillFiles = await this.findSkillFiles(checkoutPath);
         const candidates = [];
         const invalidLeafs = [];
+        const duplicateLeafs = [];
         for (const skillFilePath of skillFiles) {
             const leafRoot = path.dirname(skillFilePath);
             const relativePath = path.relative(checkoutPath, leafRoot) || ".";
@@ -42,10 +43,16 @@ export class InventoryService {
                 dedupeKey: `${parsed.name}\n${parsed.description}`,
             });
         }
-        const leafs = this.dedupeCandidates(candidates, invalidLeafs);
+        const leafs = this.dedupeCandidates(candidates, duplicateLeafs);
         leafs.sort((left, right) => left.relativePath.localeCompare(right.relativePath));
+        duplicateLeafs.sort((left, right) => left.path.localeCompare(right.path));
         invalidLeafs.sort((left, right) => left.path.localeCompare(right.path));
-        return { leafs, invalidLeafs };
+        return {
+            leafs,
+            invalidLeafs,
+            duplicateLeafs,
+            skillFileCount: skillFiles.length,
+        };
     }
     async findSkillFiles(rootPath) {
         const discovered = [];
@@ -122,14 +129,14 @@ export class InventoryService {
             metadataWarnings,
         };
     }
-    dedupeCandidates(candidates, invalidLeafs) {
+    dedupeCandidates(candidates, duplicateLeafs) {
         const keptByKey = new Map();
         for (const candidate of candidates) {
             if (keptByKey.has(candidate.dedupeKey)) {
                 const kept = keptByKey.get(candidate.dedupeKey);
-                invalidLeafs.push({
+                duplicateLeafs.push({
                     path: candidate.relativePath,
-                    reason: `Duplicate skill content skipped because ${kept.relativePath} was discovered first`,
+                    keptPath: kept.relativePath,
                 });
                 continue;
             }

package/dist/services/inventory-service.js.map

@@ -1 +1 @@
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+{"version":3,"file":"inventory-service.js","sourceRoot":"","sources":["../../src/services/inventory-service.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,kBAAkB,CAAC;AAClC,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B,OAAO,EAAE,aAAa,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAC;AAmBxD,MAAM,OAAO,gBAAgB;IACnB,MAAM,CAAU,mBAAmB,GAAG,IAAI,GAAG,CAAC;QACpD,MAAM;QACN,cAAc;KACf,CAAC,CAAC;IAEH,KAAK,CAAC,UAAU,CACd,QAAgB,EAChB,YAAoB,EACpB,YAAY,GAAG,QAAQ;QAEvB,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,cAAc,CAAC,YAAY,CAAC,CAAC;QAC3D,MAAM,UAAU,GAA8C,EAAE,CAAC;QACjE,MAAM,YAAY,GAAwB,EAAE,CAAC;QAC7C,MAAM,cAAc,GAA0B,EAAE,CAAC;QAEjD,KAAK,MAAM,aAAa,IAAI,UAAU,EAAE,CAAC;YACvC,MAAM,QAAQ,GAAG,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,CAAC;YAC7C,MAAM,YAAY,GAAG,IAAI,CAAC,QAAQ,CAAC,YAAY,EAAE,QAAQ,CAAC,IAAI,GAAG,CAAC;YAClE,MAAM,GAAG,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,aAAa,EAAE,MAAM,CAAC,CAAC;YACrD,MAAM,QAAQ,GACZ,YAAY,KAAK,GAAG;gBAClB,CAAC,CAAC,YAAY;gBACd,CAAC,CAAC,CAAC,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,YAAY,CAAC,CAAC;YAChD,MAAM,MAAM,GAAG,IAAI,CAAC,cAAc,CAAC,GAAG,EAAE,QAAQ,CAAC,CAAC;YAElD,IAAI,CAAC,MAAM,CAAC,KAAK,EAAE,CAAC;gBAClB,YAAY,CAAC,IAAI,CAAC;oBAChB,IAAI,EAAE,YAAY;oBAClB,MAAM,EAAE,MAAM,CAAC,MAAM;iBACtB,CAAC,CAAC;gBACH,SAAS;YACX,CAAC;YAED,MAAM,QAAQ,GAAG,OAAO,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,QAAQ,IAAI,QAAQ,CAAC;YAE9D,UAAU,CAAC,IAAI,CAAC;gBACd,EAAE,EAAE,GAAG,QAAQ,IAAI,YAAY,EAAE;gBACjC,QAAQ;gBACR,IAAI,EAAE,QAAQ;gBACd,QAAQ;gBACR,KAAK,EAAE,MAAM,CAAC,KAAK;gBACnB,WAAW,EAAE,MAAM,CAAC,WAAW;gBAC/B,YAAY;gBACZ,YAAY,EAAE,QAAQ;gBACtB,aAAa;gBACb,WAAW,EAAE,MAAM,aAAa,CAAC,QAAQ,CAAC;gBAC1C,gBAAgB,EAAE,MAAM,CAAC,gBAAgB;gBACzC,KAAK,EAAE,IAAI;gBACX,SAAS,EAAE,GAAG,MAAM,CAAC,IAAI,KAAK,MAAM,CAAC,WAAW,EAAE;aACnD,CAAC,CAAC;QACL,CAAC;QAED,MAAM,KAAK,GAAG,IAAI,CAAC,gBAAgB,CAAC,UAAU,EAAE,cAAc,CAAC,CAAC;QAChE,KAAK,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,aAAa,CAAC,KAAK,CAAC,YAAY,CAAC,CAAC,CAAC;QACjF,cAAc,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;QAC1E,YAAY,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;QAExE,OAAO;YACL,KAAK;YACL,YAAY;YACZ,cAAc;YACd,cAAc,EAAE,UAAU,CAAC,MAAM;SAClC,CAAC;IACJ,CAAC;IAEO,KAAK,CAAC,cAAc,CAAC,QAAgB;QAC3C,MAAM,UAAU,GAAa,EAAE,CAAC;QAEhC,KAAK,UAAU,IAAI,CAAC,WAAmB;YACrC,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;YACvE,MAAM,KAAK,GAAG,OAAO;iBAClB,MAAM,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC;iBACjC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;YAC9D,MAAM,kBAAkB,GAAG,OAAO;iBAC/B,MAAM,CACL,CAAC,KAAK,EAAE,EAAE,CACR,KAAK,CAAC,WAAW,EAAE;gBACnB,CAAC,gBAAgB,CAAC,mBAAmB,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBACrD,CAAC,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,CAC9B;iBACA,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;YAC9D,MAAM,iBAAiB,GAAG,OAAO;iBAC9B,MAAM,CACL,CAAC,KAAK,EAAE,EAAE,CACR,KAAK,CAAC,WAAW,EAAE;gBACnB,CAAC,gBAAgB,CAAC,mBAAmB,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBACrD,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,CAC7B;iBACA,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;YAE9D,KAAK,MAAM,KAAK,IAAI,KAAK,EAAE,CAAC;gBAC1B,IAAI,KAAK,CAAC,IAAI,KAAK,UAAU,EAAE,CAAC;oBAC9B,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;gBACtD,CAAC;YACH,CAAC;YAED,KAAK,MAAM,KAAK,IAAI,CAAC,GAAG,kBAAkB,EAAE,GAAG,iBAAiB,CAAC,EAAE,CAAC;gBAClE,MAAM,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;YACjD,CAAC;QACH,CAAC;QAED,MAAM,IAAI,CAAC,QAAQ,CAAC,CAAC;QACrB,OAAO,UAAU,CAAC;IACpB,CAAC;IAEO,cAAc,CAAC,GAAW,EAAE,aAAqB;QACvD,MAAM,KAAK,GAAG,GAAG,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QACjC,MAAM,WAAW,GAAG,IAAI,CAAC,gBAAgB,CAAC,KAAK,CAAC,CAAC;QACjD,IAAI,CAAC,WAAW,EAAE,CAAC;YACjB,OAAO,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,EAAE,2CAA2C,EAAE,CAAC;QAC/E,CAAC;QAED,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,IAAI,EAAE,MAAM,CAAC,EAAE,CAAC;YAC7C,OAAO;gBACL,KAAK,EAAE,KAAK;gBACZ,MAAM,EAAE,yDAAyD;aAClE,CAAC;QACJ,CAAC;QAED,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,IAAI,EAAE,aAAa,CAAC,EAAE,CAAC;YACpD,OAAO;gBACL,KAAK,EAAE,KAAK;gBACZ,MAAM,EAAE,gEAAgE;aACzE,CAAC;QACJ,CAAC;QAED,MAAM,SAAS,GAAG,KAAK,CAAC,KAAK,CAAC,WAAW,CAAC,aAAa,CAAC,CAAC;QACzD,MAAM,YAAY,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC;QAC5E,MAAM,OAAO,GAAG,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC;QACrD,MAAM,cAAc,GAAG,WAAW,CAAC,IAAI,CAAC,WAAW,IAAI,EAAE,CAAC;QAC1D,MAAM,gBAAgB,GAAa,EAAE,CAAC;QAEtC,IACE,OAAO,CAAC,MAAM,GAAG,CAAC;YAClB,OAAO,CAAC,MAAM,GAAG,EAAE;YACnB,CAAC,4BAA4B,CAAC,IAAI,CAAC,OAAO,CAAC,EAC3C,CAAC;YACD,gBAAgB,CAAC,IAAI,CACnB,wHAAwH,CACzH,CAAC;QACJ,CAAC;QAED,IAAI,OAAO,KAAK,aAAa,EAAE,CAAC;YAC9B,gBAAgB,CAAC,IAAI,CACnB,4CAA4C,aAAa,GAAG,CAC7D,CAAC;QACJ,CAAC;QAED,IAAI,cAAc,CAAC,IAAI,EAAE,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACvC,gBAAgB,CAAC,IAAI,CAAC,iCAAiC,CAAC,CAAC;QAC3D,CAAC;QAED,IAAI,cAAc,CAAC,MAAM,GAAG,IAA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package/dist/services/skill-flow.d.ts

@@ -1,16 +1,14 @@
-import type { DeploymentAction, DeploymentPlan, DeploymentTargetName, DoctorReport, LockFile, Manifest, Result, SkillCandidate, SourceBinding, Warning, WorkflowSummary } from "../domain/types.js";
+import type { DraftBinding, DeploymentAction, DeploymentPlan, DeploymentTargetName, DoctorReport, LockFile, Manifest, Result, SkillCandidate, SourceBinding, SourceUpdateResult, WorkflowSummary } from "../domain/types.js";
 import { StateStore } from "../state/store.js";
 import { DeploymentApplier } from "./deployment-applier.js";
+import { ConfigCoordinator } from "./config-coordinator.js";
 import { DeploymentPlanner } from "./deployment-planner.js";
 import { DoctorService } from "./doctor-service.js";
 import { InventoryService } from "./inventory-service.js";
 import { SourceService } from "./source-service.js";
 import { WorkflowService } from "./workflow-service.js";
-import type { AddSourceOptions } from "./source-service.js";
-export type DraftBinding = {
-    enabledTargets: DeploymentTargetName[];
-    selectedLeafIds: string[];
-};
+import type { AddSourceOptions, SourceSnapshot } from "./source-service.js";
+import { WorkspaceBootstrapService, type BootstrapEvent } from "./workspace-bootstrap-service.js";
 export declare class SkillFlowApp {
     readonly store: StateStore;
     readonly inventoryService: InventoryService;
@@ -19,28 +17,35 @@ export declare class SkillFlowApp {
     readonly applier: DeploymentApplier;
     readonly doctorService: DoctorService;
     readonly workflowService: WorkflowService;
-    addSource(locator: string, options?: AddSourceOptions): Promise<{
-        ok: true;
-        data: import("./source-service.js").SourceSnapshot;
-        warnings: Warning[];
-        errors: [];
-    } | {
-        ok: false;
-        data?: import("./source-service.js").SourceSnapshot;
-        warnings: Warning[];
-        errors: import("../domain/types.js").Failure[];
-    }>;
+    readonly workspaceBootstrapService: WorkspaceBootstrapService;
+    readonly configCoordinator: ConfigCoordinator;
+    private mutationQueue;
+    constructor();
+    addSource(locator: string, options?: AddSourceOptions): Promise<Result<SourceSnapshot>>;
+    private addSourceImpl;
     findSkills(query: string): Promise<Result<{
         candidates: SkillCandidate[];
     }>>;
     listWorkflows(): Promise<Result<{
         summaries: WorkflowSummary[];
     }>>;
+    private listWorkflowsImpl;
     getConfigData(): Promise<Result<{
         manifest: Manifest;
         lockFile: LockFile;
         summaries: WorkflowSummary[];
     }>>;
+    private getConfigDataImpl;
+    bootstrapWorkspaceState(onEvent?: (event: BootstrapEvent) => void): Promise<Result<{
+        availableTargets: DeploymentTargetName[];
+        manifest: Manifest;
+        lockFile: LockFile;
+        summaries: WorkflowSummary[];
+        initialDrafts: Record<string, DraftBinding>;
+        audit: DoctorReport;
+        importedSourceIds: string[];
+    }>>;
+    private bootstrapWorkspaceStateImpl;
     getAvailableTargets(): Promise<DeploymentTargetName[]>;
     previewDraft(sourceId: string, draft: DraftBinding): Promise<Result<{
         plan: DeploymentPlan;
@@ -51,16 +56,22 @@ export declare class SkillFlowApp {
         actions: DeploymentAction[];
         draft: DraftBinding;
     }>>;
-    updateSources(sourceIds?: string[]): Promise<Result<{
-        updated: Array<{
-            sourceId: string;
-            changed: boolean;
-            addedLeafIds: string[];
-            removedLeafIds: string[];
-            invalidatedLeafIds: string[];
-        }>;
-    }>>;
+    private applyDraftImpl;
+    updateSources(sourceIds?: string[]): Promise<Result<SourceUpdateResult>>;
+    private updateSourcesImpl;
     doctor(): Promise<Result<DoctorReport>>;
+    private doctorImpl;
+    repairTargets(sourceIds?: string[]): Promise<Result<{
+        actions: DeploymentAction[];
+    }>>;
+    private repairTargetsImpl;
+    repairSource(sourceIds?: string[]): Promise<Result<SourceUpdateResult>>;
+    private repairSourceImpl;
+    repairState(sourceIds?: string[]): Promise<Result<{
+        repairedSourceIds: string[];
+        removedDeploymentCount: number;
+    }>>;
+    private repairStateImpl;
     uninstall(sourceIds: string[]): Promise<Result<{
         removed: string[];
         removedRefs: Array<{
@@ -70,8 +81,11 @@ export declare class SkillFlowApp {
         }>;
         warnings: string[];
     }>>;
+    private uninstallImpl;
     bindingFromDraft(draft: DraftBinding): SourceBinding;
+    private pruneMissingCheckoutsImpl;
     private persistNormalizedBindings;
+    private runSerializedMutation;
     private normalizeBindings;
     private draftFromBinding;
     private selectLeafIdsForRequestedPath;
@@ -79,6 +93,13 @@ export declare class SkillFlowApp {
     private findExactDuplicateLeafSelections;
     private getExactDuplicateKey;
     private planForAffectedSources;
+    private planForSources;
+    private planAndApplySources;
+    private rebuildDeploymentState;
+    private buildProjectedLinkNameMap;
+    private findManagedDeploymentOnDisk;
+    private matchesManagedProjection;
+    private getDeploymentKey;
     private hasActiveTargets;
     private buildLocalCandidates;
     private searchBuiltinGitSource;
@@ -88,5 +109,8 @@ export declare class SkillFlowApp {
     private getSourceRank;
     private getQueryScore;
     private getCandidateKey;
+    private getCandidateTitle;
+    private normalizeSearchQuery;
     private formatSourceLabel;
+    private applySourceUpdateResults;
 }