sisyphi 0.1.2 → 0.1.3

package/dist/daemon.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/daemon/index.ts","../src/shared/config.ts","../src/daemon/server.ts","../src/daemon/session-manager.ts","../src/daemon/state.ts","../src/daemon/orchestrator.ts","../src/daemon/tmux.ts","../src/daemon/colors.ts","../src/daemon/agent.ts","../src/daemon/pane-monitor.ts"],"sourcesContent":["import { mkdirSync, readFileSync, writeFileSync, unlinkSync, existsSync } from 'node:fs';\nimport { globalDir, daemonPidPath, statePath } from '../shared/paths.js';\nimport { loadConfig } from '../shared/config.js';\nimport { startServer, stopServer, registerSessionCwd, loadSessionRegistry } from './server.js';\nimport { startMonitor, stopMonitor, setRespawnCallback } from './pane-monitor.js';\nimport { onAllAgentsDone } from './session-manager.js';\n\nfunction ensureDirs(): void {\n  mkdirSync(globalDir(), { recursive: true });\n}\n\nfunction isProcessAlive(pid: number): boolean {\n  try {\n    process.kill(pid, 0);\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction acquirePidLock(): void {\n  const pidFile = daemonPidPath();\n  try {\n    const existing = parseInt(readFileSync(pidFile, 'utf-8').trim(), 10);\n    if (existing && isProcessAlive(existing)) {\n      console.error(`[sisyphus] Daemon already running (pid ${existing}). Kill it first or remove ${pidFile}`);\n      process.exit(1);\n    }\n  } catch {\n    // No pidfile or unreadable — proceed\n  }\n  writeFileSync(pidFile, String(process.pid), 'utf-8');\n}\n\nfunction releasePidLock(): void {\n  try {\n    unlinkSync(daemonPidPath());\n  } catch {\n    // Already gone\n  }\n}\n\nfunction recoverSessions(): void {\n  const registry = loadSessionRegistry();\n  const entries = Object.entries(registry);\n\n  if (entries.length === 0) {\n    console.log('[sisyphus] No sessions to recover');\n    return;\n  }\n\n  let recovered = 0;\n  for (const [sessionId, cwd] of entries) {\n    const stateFile = statePath(cwd, sessionId);\n    if (!existsSync(stateFile)) {\n      continue;\n    }\n\n    try {\n      const session = JSON.parse(readFileSync(stateFile, 'utf-8')) as { status: string };\n      if (session.status === 'active' || session.status === 'paused') {\n        registerSessionCwd(sessionId, cwd);\n        recovered++;\n      }\n    } catch {\n      console.error(`[sisyphus] Failed to read session state for ${sessionId}, skipping`);\n    }\n  }\n\n  console.log(`[sisyphus] Recovered ${recovered} session(s) from registry`);\n}\n\nasync function main(): Promise<void> {\n  console.log('[sisyphus] Starting daemon...');\n  ensureDirs();\n  acquirePidLock();\n\n  const config = loadConfig(process.cwd());\n\n  setRespawnCallback(onAllAgentsDone);\n\n  await startServer();\n  startMonitor(config.pollIntervalMs);\n\n  recoverSessions();\n\n  const shutdown = async () => {\n    console.log('[sisyphus] Shutting down...');\n    stopMonitor();\n    await stopServer();\n    releasePidLock();\n    process.exit(0);\n  };\n\n  process.on('SIGTERM', shutdown);\n  process.on('SIGINT', shutdown);\n}\n\nmain().catch((err) => {\n  console.error('[sisyphus] Fatal error:', err);\n  process.exit(1);\n});\n","import { readFileSync } from 'node:fs';\nimport { globalConfigPath, projectConfigPath } from './paths.js';\n\nexport interface Config {\n  model?: string;\n  tmuxSession?: string;\n  orchestratorPrompt?: string;\n  pollIntervalMs?: number;\n}\n\nconst DEFAULT_CONFIG: Config = {\n  pollIntervalMs: 1000,\n};\n\nfunction readJsonFile(filePath: string): Partial<Config> {\n  try {\n    const content = readFileSync(filePath, 'utf-8');\n    return JSON.parse(content) as Partial<Config>;\n  } catch {\n    return {};\n  }\n}\n\nexport function loadConfig(cwd: string): Config {\n  const global = readJsonFile(globalConfigPath());\n  const project = readJsonFile(projectConfigPath(cwd));\n  return { ...DEFAULT_CONFIG, ...global, ...project };\n}\n","import { createServer, type Server } from 'node:net';\nimport { unlinkSync, existsSync, writeFileSync, readFileSync, mkdirSync } from 'node:fs';\nimport { socketPath, globalDir } from '../shared/paths.js';\nimport { join } from 'node:path';\nimport type { Request, Response } from '../shared/protocol.js';\nimport * as sessionManager from './session-manager.js';\n\nlet server: Server | null = null;\n\n// Track the cwd for each session so we can route requests\nconst sessionCwdMap = new Map<string, string>();\n// Track the originating tmux session for each sisyphus session\nconst sessionTmuxMap = new Map<string, string>();\n// Track the originating tmux window for each sisyphus session\nconst sessionWindowMap = new Map<string, string>();\n\nexport function getSessionCwd(sessionId: string): string | undefined {\n  return sessionCwdMap.get(sessionId);\n}\n\nexport function getSessionTmux(sessionId: string): string | undefined {\n  return sessionTmuxMap.get(sessionId);\n}\n\nfunction registryPath(): string {\n  return join(globalDir(), 'session-registry.json');\n}\n\nfunction persistSessionRegistry(): void {\n  const dir = globalDir();\n  mkdirSync(dir, { recursive: true });\n  const registry: Record<string, string> = {};\n  for (const [id, cwd] of sessionCwdMap) {\n    registry[id] = cwd;\n  }\n  writeFileSync(registryPath(), JSON.stringify(registry, null, 2), 'utf-8');\n}\n\nexport function loadSessionRegistry(): Record<string, string> {\n  const p = registryPath();\n  if (!existsSync(p)) return {};\n  try {\n    return JSON.parse(readFileSync(p, 'utf-8')) as Record<string, string>;\n  } catch {\n    return {};\n  }\n}\n\nexport function registerSessionCwd(sessionId: string, cwd: string): void {\n  sessionCwdMap.set(sessionId, cwd);\n  persistSessionRegistry();\n}\n\nasync function handleRequest(req: Request): Promise<Response> {\n  try {\n    switch (req.type) {\n      case 'start': {\n        const session = await sessionManager.startSession(req.task, req.cwd, req.tmuxSession, req.tmuxWindow);\n        registerSessionCwd(session.id, req.cwd);\n        sessionTmuxMap.set(session.id, req.tmuxSession);\n        sessionWindowMap.set(session.id, req.tmuxWindow);\n        return { ok: true, data: { sessionId: session.id } };\n      }\n\n      case 'spawn': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = await sessionManager.handleSpawn(req.sessionId, cwd, req.agentType, req.name, req.instruction);\n        return { ok: true, data: { agentId: result.agentId } };\n      }\n\n      case 'submit': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const windowId = sessionWindowMap.get(req.sessionId);\n        if (!windowId) return { ok: false, error: `No tmux window found for session: ${req.sessionId}` };\n        await sessionManager.handleSubmit(cwd, req.sessionId, req.agentId, req.report, windowId);\n        return { ok: true };\n      }\n\n      case 'report': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleReport(cwd, req.sessionId, req.agentId, req.content);\n        return { ok: true };\n      }\n\n      case 'yield': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleYield(req.sessionId, cwd, req.nextPrompt);\n        return { ok: true };\n      }\n\n      case 'complete': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleComplete(req.sessionId, cwd, req.report);\n        return { ok: true };\n      }\n\n      case 'status': {\n        if (req.sessionId) {\n          const cwd = sessionCwdMap.get(req.sessionId);\n          if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n          const session = sessionManager.getSessionStatus(cwd, req.sessionId);\n          return { ok: true, data: { session: session as unknown as Record<string, unknown> } };\n        }\n        return { ok: true, data: { message: 'daemon running' } };\n      }\n\n      case 'tasks_add': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = await sessionManager.handleTaskAdd(cwd, req.sessionId, req.description, req.status);\n        return { ok: true, data: { taskId: result.taskId } };\n      }\n\n      case 'tasks_update': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleTaskUpdate(cwd, req.sessionId, req.taskId, req.status, req.description);\n        return { ok: true };\n      }\n\n      case 'tasks_list': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = sessionManager.handleTasksList(cwd, req.sessionId);\n        return { ok: true, data: { tasks: result.tasks as unknown as Record<string, unknown> } };\n      }\n\n      case 'list': {\n        // List sessions across all known cwds\n        const allSessions: Array<Record<string, unknown>> = [];\n        const seenCwds = new Set<string>();\n        for (const cwd of sessionCwdMap.values()) {\n          if (seenCwds.has(cwd)) continue;\n          seenCwds.add(cwd);\n          const sessions = sessionManager.listSessions(cwd);\n          allSessions.push(...sessions.map(s => s as unknown as Record<string, unknown>));\n        }\n        return { ok: true, data: { sessions: allSessions } };\n      }\n\n      case 'resume': {\n        let cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) {\n          // Session not in memory — try to recover from disk using the cwd provided by CLI\n          const stateFile = `${req.cwd}/.sisyphus/sessions/${req.sessionId}/state.json`;\n          if (existsSync(stateFile)) {\n            cwd = req.cwd;\n            registerSessionCwd(req.sessionId, cwd);\n          } else {\n            return { ok: false, error: `Unknown session: ${req.sessionId}. No state.json found at ${stateFile}` };\n          }\n        }\n        sessionTmuxMap.set(req.sessionId, req.tmuxSession);\n        sessionWindowMap.set(req.sessionId, req.tmuxWindow);\n        const session = await sessionManager.resumeSession(req.sessionId, cwd, req.tmuxSession, req.tmuxWindow, req.message);\n        return { ok: true, data: { sessionId: session.id, status: session.status } };\n      }\n\n      case 'register_claude_session': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleRegisterClaudeSession(cwd, req.sessionId, req.agentId, req.claudeSessionId);\n        return { ok: true };\n      }\n\n      case 'kill': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const killedAgents = await sessionManager.handleKill(req.sessionId, cwd);\n        sessionCwdMap.delete(req.sessionId);\n        sessionTmuxMap.delete(req.sessionId);\n        sessionWindowMap.delete(req.sessionId);\n        persistSessionRegistry();\n        return { ok: true, data: { killedAgents, sessionId: req.sessionId } };\n      }\n\n      default:\n        return { ok: false, error: `Unknown request type: ${(req as Record<string, unknown>).type}` };\n    }\n  } catch (err) {\n    const message = err instanceof Error ? err.message : String(err);\n    return { ok: false, error: message };\n  }\n}\n\nexport function startServer(): Promise<Server> {\n  return new Promise((resolve, reject) => {\n    const sock = socketPath();\n\n    if (existsSync(sock)) {\n      unlinkSync(sock);\n    }\n\n    server = createServer((conn) => {\n      let buffer = '';\n\n      conn.on('data', (chunk) => {\n        buffer += chunk.toString();\n        const lines = buffer.split('\\n');\n        buffer = lines.pop()!;\n\n        for (const line of lines) {\n          if (!line.trim()) continue;\n          let req: Request;\n          try {\n            req = JSON.parse(line) as Request;\n          } catch {\n            conn.write(JSON.stringify({ ok: false, error: 'Invalid JSON' }) + '\\n');\n            continue;\n          }\n\n          handleRequest(req).then((res) => {\n            conn.write(JSON.stringify(res) + '\\n');\n          });\n        }\n      });\n\n      conn.on('error', (err) => {\n        console.error('[sisyphus] Connection error:', err.message);\n      });\n    });\n\n    server.on('error', reject);\n\n    server.listen(sock, () => {\n      console.log(`[sisyphus] Daemon listening on ${sock}`);\n      resolve(server!);\n    });\n  });\n}\n\nexport function stopServer(): Promise<void> {\n  return new Promise((resolve) => {\n    if (!server) {\n      resolve();\n      return;\n    }\n    server.close(() => {\n      const sock = socketPath();\n      if (existsSync(sock)) {\n        unlinkSync(sock);\n      }\n      server = null;\n      resolve();\n    });\n  });\n}\n","import { v4 as uuidv4 } from 'uuid';\nimport { existsSync, readdirSync } from 'node:fs';\nimport * as state from './state.js';\nimport * as orchestrator from './orchestrator.js';\nimport * as tmux from './tmux.js';\nimport { spawnAgent, resetAgentCounter, clearAgentCounter, handleAgentSubmit, handleAgentReport } from './agent.js';\nimport { trackSession, untrackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { resetColors } from './colors.js';\nimport { sessionsDir } from '../shared/paths.js';\nimport type { Session, TaskStatus } from '../shared/types.js';\n\nexport async function startSession(task: string, cwd: string, tmuxSession: string, windowId: string): Promise<Session> {\n  const sessionId = uuidv4();\n  const session = state.createSession(sessionId, task, cwd);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId);\n  updateTrackedWindow(sessionId, windowId);\n\n  return session;\n}\n\nexport async function resumeSession(sessionId: string, cwd: string, tmuxSession: string, windowId: string, message?: string): Promise<Session> {\n  const session = state.getSession(cwd, sessionId);\n\n  // Mark any \"running\" agents as \"lost\"\n  for (const agent of session.agents) {\n    if (agent.status === 'running') {\n      await state.updateAgent(cwd, sessionId, agent.id, {\n        status: 'lost',\n        completedAt: new Date().toISOString(),\n        killedReason: 'session resumed — agent was still running',\n      });\n    }\n  }\n\n  await state.updateSessionStatus(cwd, sessionId, 'active');\n\n  // Reset counters based on existing agents\n  resetAgentCounter(sessionId, session.agents.length);\n  resetColors(sessionId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId, message);\n  updateTrackedWindow(sessionId, windowId);\n\n  return state.getSession(cwd, sessionId);\n}\n\nexport function getSessionStatus(cwd: string, sessionId: string): Session {\n  return state.getSession(cwd, sessionId);\n}\n\nexport function listSessions(cwd: string): Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> {\n  const dir = sessionsDir(cwd);\n  if (!existsSync(dir)) return [];\n\n  const entries = readdirSync(dir, { withFileTypes: true });\n  const sessions: Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> = [];\n\n  for (const entry of entries) {\n    if (!entry.isDirectory()) continue;\n    try {\n      const session = state.getSession(cwd, entry.name);\n      sessions.push({\n        id: session.id,\n        task: session.task,\n        status: session.status,\n        createdAt: session.createdAt,\n        agentCount: session.agents.length,\n      });\n    } catch (err) {\n      console.error(`[sisyphus] Failed to read session ${entry.name}:`, err);\n    }\n  }\n\n  return sessions;\n}\n\nexport function onAllAgentsDone(sessionId: string, cwd: string, windowId: string): void {\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  // Delay to let /exit finish quitting the previous Claude session\n  setTimeout(() => {\n    orchestrator.spawnOrchestrator(sessionId, cwd, windowId)\n      .then(() => updateTrackedWindow(sessionId, windowId))\n      .catch((err: unknown) => console.error(`[sisyphus] Failed to respawn orchestrator for session ${sessionId}:`, err));\n  }, 2000);\n}\n\nexport async function handleSpawn(\n  sessionId: string,\n  cwd: string,\n  agentType: string,\n  name: string,\n  instruction: string,\n): Promise<{ agentId: string }> {\n  const windowId = orchestrator.getWindowId(sessionId);\n  if (!windowId) throw new Error(`No tmux window found for session ${sessionId}`);\n\n  const agent = await spawnAgent({\n    sessionId,\n    cwd,\n    agentType,\n    name,\n    instruction,\n    windowId,\n  });\n\n  await state.appendAgentToLastCycle(cwd, sessionId, agent.id);\n\n  return { agentId: agent.id };\n}\n\nexport async function handleSubmit(cwd: string, sessionId: string, agentId: string, report: string, windowId: string): Promise<void> {\n  const allDone = await handleAgentSubmit(cwd, sessionId, agentId, report);\n  if (allDone) {\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n\nexport async function handleReport(cwd: string, sessionId: string, agentId: string, content: string): Promise<void> {\n  await handleAgentReport(cwd, sessionId, agentId, content);\n}\n\nexport async function handleYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  await orchestrator.handleOrchestratorYield(sessionId, cwd, nextPrompt);\n}\n\nexport async function handleComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  untrackSession(sessionId);\n  await orchestrator.handleOrchestratorComplete(sessionId, cwd, report);\n}\n\nexport async function handleTaskAdd(cwd: string, sessionId: string, description: string, initialStatus?: string): Promise<{ taskId: string }> {\n  const VALID_STATUSES: Set<string> = new Set(['draft', 'pending', 'in_progress', 'done']);\n  const status = initialStatus !== undefined && VALID_STATUSES.has(initialStatus) ? initialStatus as TaskStatus : undefined;\n  const task = await state.addTask(cwd, sessionId, description, status);\n  return { taskId: task.id };\n}\n\nexport async function handleTaskUpdate(cwd: string, sessionId: string, taskId: string, status?: string, description?: string): Promise<void> {\n  const VALID_STATUSES: Set<string> = new Set(['draft', 'pending', 'in_progress', 'done']);\n  const updates: { status?: TaskStatus; description?: string } = {};\n  if (status !== undefined) {\n    if (!VALID_STATUSES.has(status)) throw new Error(`Invalid status: ${status}. Valid: draft, pending, in_progress, done`);\n    updates.status = status as TaskStatus;\n  }\n  if (description !== undefined) updates.description = description;\n  await state.updateTask(cwd, sessionId, taskId, updates);\n}\n\nexport function handleTasksList(cwd: string, sessionId: string): { tasks: Session['tasks'] } {\n  const session = state.getSession(cwd, sessionId);\n  return { tasks: session.tasks };\n}\n\nexport async function handleRegisterClaudeSession(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  claudeSessionId: string,\n): Promise<void> {\n  await state.updateAgent(cwd, sessionId, agentId, { claudeSessionId });\n}\n\nexport async function handleKill(sessionId: string, cwd: string): Promise<number> {\n  const session = state.getSession(cwd, sessionId);\n  const windowId = orchestrator.getWindowId(sessionId);\n\n  // Kill all running agents\n  let killedAgents = 0;\n  for (const agent of session.agents) {\n    if (agent.status === 'running') {\n      await state.updateAgent(cwd, sessionId, agent.id, {\n        status: 'killed',\n        killedReason: 'session killed by user',\n        completedAt: new Date().toISOString(),\n      });\n      killedAgents++;\n    }\n  }\n\n  // Kill the orchestrator pane if it exists\n  const orchPaneId = orchestrator.getOrchestratorPaneId(sessionId);\n  if (orchPaneId) {\n    tmux.killPane(orchPaneId);\n  }\n\n  // Mark session as completed\n  await state.updateSessionStatus(cwd, sessionId, 'completed');\n\n  // Untrack from pane monitor\n  untrackSession(sessionId);\n\n  // Kill the entire tmux window\n  if (windowId) {\n    tmux.killWindow(windowId);\n  }\n\n  // Clean up agent counter\n  clearAgentCounter(sessionId);\n\n  return killedAgents;\n}\n","import { readFileSync, writeFileSync, mkdirSync, renameSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport { randomUUID } from 'node:crypto';\nimport type { Session, Agent, AgentReport, Task, OrchestratorCycle, SessionStatus, TaskStatus } from '../shared/types.js';\nimport { statePath, sessionDir, contextDir } from '../shared/paths.js';\n\n// Per-session mutex to prevent read-modify-write races\nconst sessionLocks = new Map<string, Promise<void>>();\n\nasync function withSessionLock<T>(sessionId: string, fn: () => T): Promise<T> {\n  const prev = sessionLocks.get(sessionId) ?? Promise.resolve();\n  let resolve: () => void;\n  const next = new Promise<void>(r => { resolve = r; });\n  sessionLocks.set(sessionId, next);\n  await prev;\n  try {\n    return fn();\n  } finally {\n    resolve!();\n  }\n}\n\nfunction atomicWrite(filePath: string, data: string): void {\n  const dir = dirname(filePath);\n  const tmpPath = join(dir, `.state.${randomUUID()}.tmp`);\n  writeFileSync(tmpPath, data, 'utf-8');\n  renameSync(tmpPath, filePath);\n}\n\nexport function createSession(id: string, task: string, cwd: string): Session {\n  const dir = sessionDir(cwd, id);\n  mkdirSync(dir, { recursive: true });\n  mkdirSync(contextDir(cwd, id), { recursive: true });\n\n  const session: Session = {\n    id,\n    task,\n    cwd,\n    status: 'active',\n    createdAt: new Date().toISOString(),\n    tasks: [],\n    agents: [],\n    orchestratorCycles: [],\n  };\n\n  atomicWrite(statePath(cwd, id), JSON.stringify(session, null, 2));\n  return session;\n}\n\nexport function getSession(cwd: string, sessionId: string): Session {\n  const content = readFileSync(statePath(cwd, sessionId), 'utf-8');\n  return JSON.parse(content) as Session;\n}\n\nfunction saveSession(session: Session): void {\n  atomicWrite(statePath(session.cwd, session.id), JSON.stringify(session, null, 2));\n}\n\nexport async function addTask(cwd: string, sessionId: string, description: string, initialStatus?: TaskStatus): Promise<Task> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const nextNum = session.tasks.length + 1;\n    const task: Task = {\n      id: `t${nextNum}`,\n      description,\n      status: initialStatus !== undefined ? initialStatus : 'pending',\n    };\n    session.tasks.push(task);\n    saveSession(session);\n    return task;\n  });\n}\n\nexport async function updateTask(cwd: string, sessionId: string, taskId: string, updates: { status?: TaskStatus; description?: string }): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const task = session.tasks.find(t => t.id === taskId);\n    if (!task) throw new Error(`Task ${taskId} not found in session ${sessionId}`);\n    if (updates.status) task.status = updates.status;\n    if (updates.description) task.description = updates.description;\n    saveSession(session);\n  });\n}\n\nexport async function addAgent(cwd: string, sessionId: string, agent: Agent): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.agents.push(agent);\n    saveSession(session);\n  });\n}\n\nexport async function updateAgent(cwd: string, sessionId: string, agentId: string, updates: Partial<Agent>): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.find(a => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    Object.assign(agent, updates);\n    saveSession(session);\n  });\n}\n\nexport async function addOrchestratorCycle(cwd: string, sessionId: string, cycle: OrchestratorCycle): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.orchestratorCycles.push(cycle);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionStatus(cwd: string, sessionId: string, status: SessionStatus, completionReport?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = status;\n    if (completionReport !== undefined) {\n      session.completionReport = completionReport;\n    }\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentToLastCycle(cwd: string, sessionId: string, agentId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    cycles[cycles.length - 1]!.agentsSpawned.push(agentId);\n    saveSession(session);\n  });\n}\n\nexport async function completeSession(cwd: string, sessionId: string, report: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = 'completed';\n    session.completedAt = new Date().toISOString();\n    session.completionReport = report;\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentReport(cwd: string, sessionId: string, agentId: string, entry: AgentReport): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.find(a => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    agent.reports.push(entry);\n    saveSession(session);\n  });\n}\n\nexport async function completeOrchestratorCycle(cwd: string, sessionId: string, nextPrompt?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    const cycle = cycles[cycles.length - 1]!;\n    cycle.completedAt = new Date().toISOString();\n    if (nextPrompt) cycle.nextPrompt = nextPrompt;\n    saveSession(session);\n  });\n}\n","import { readFileSync, existsSync, writeFileSync, readdirSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { ORCHESTRATOR_COLOR } from './colors.js';\nimport { projectOrchestratorPromptPath, sessionDir, contextDir } from '../shared/paths.js';\nimport type { Session, Agent } from '../shared/types.js';\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nconst sessionWindowMap = new Map<string, string>();\nconst sessionOrchestratorPane = new Map<string, string>();\n\nexport function getWindowId(sessionId: string): string | undefined {\n  return sessionWindowMap.get(sessionId);\n}\n\nexport function setWindowId(sessionId: string, windowId: string): void {\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nexport function getOrchestratorPaneId(sessionId: string): string | undefined {\n  return sessionOrchestratorPane.get(sessionId);\n}\n\nfunction loadOrchestratorPrompt(cwd: string): string {\n  const projectPath = projectOrchestratorPromptPath(cwd);\n  if (existsSync(projectPath)) {\n    return readFileSync(projectPath, 'utf-8');\n  }\n  const bundledPath = resolve(import.meta.dirname, '../templates/orchestrator.md');\n  return readFileSync(bundledPath, 'utf-8');\n}\n\nfunction formatStateForOrchestrator(session: Session): string {\n  const shortId = session.id.slice(0, 8);\n  const cycleNum = session.orchestratorCycles.length;\n\n  const taskLines = session.tasks.length > 0\n    ? session.tasks.map(t => `- ${t.id}: [${t.status}] ${t.description}`).join('\\n')\n    : '  (none)';\n\n  const ctxDir = contextDir(session.cwd, session.id);\n  let contextLines: string;\n  if (existsSync(ctxDir)) {\n    const files = readdirSync(ctxDir);\n    contextLines = files.length > 0 ? files.map(f => `- ${f}`).join('\\n') : '  (none)';\n  } else {\n    contextLines = '  (none)';\n  }\n\n  const agentLines = session.agents.length > 0\n    ? session.agents.map((a: Agent) => {\n        const header = `- ${a.id} (${a.name}): ${a.status} — ${a.reports.length} report(s)`;\n        if (a.reports.length === 0) return header;\n        let updateNum = 0;\n        const reportLines = a.reports.map(r => {\n          const label = r.type === 'final' ? '[final]' : `[update ${String(++updateNum).padStart(3, '0')}]`;\n          return `  ${label} \"${r.summary}\" → ${r.filePath}`;\n        });\n        return [header, ...reportLines].join('\\n');\n      }).join('\\n')\n    : '  (none)';\n\n  const cycleLines = session.orchestratorCycles.length > 0\n    ? session.orchestratorCycles.map(c => {\n        const spawnedList = c.agentsSpawned.length > 0 ? c.agentsSpawned.join(', ') : '(none)';\n        return `Cycle ${c.cycle}: Spawned ${spawnedList}`;\n      }).join('\\n')\n    : '  (none)';\n\n  return [\n    '<state>',\n    `session: ${shortId} (cycle ${cycleNum})`,\n    `task: ${session.task}`,\n    `status: ${session.status}`,\n    '',\n    '## Tasks',\n    taskLines,\n    '',\n    '## Context Files',\n    contextLines,\n    '',\n    '## Agents',\n    agentLines,\n    '',\n    '## Previous Cycles',\n    cycleLines,\n    '</state>',\n  ].join('\\n');\n}\n\nexport async function spawnOrchestrator(sessionId: string, cwd: string, windowId: string, message?: string): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  const basePrompt = loadOrchestratorPrompt(cwd);\n  const formattedState = formatStateForOrchestrator(session);\n\n  // System prompt: template only (no state)\n  const cycleNum = session.orchestratorCycles.length + 1;\n  const promptFilePath = `${sessionDir(cwd, sessionId)}/orchestrator-prompt-${cycleNum}.md`;\n  writeFileSync(promptFilePath, basePrompt, 'utf-8');\n\n  sessionWindowMap.set(sessionId, windowId);\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='orchestrator'`,\n  ].join(' && ');\n\n  // User message: state block + contextual prompt\n  let userPrompt: string;\n  if (message) {\n    userPrompt = `${formattedState}\\n\\nThe user resumed this session with new instructions: ${message}`;\n  } else {\n    // Check last completed cycle for a stored nextPrompt\n    const lastCycle = [...session.orchestratorCycles].reverse().find(c => c.completedAt);\n    const storedPrompt = lastCycle?.nextPrompt;\n    if (storedPrompt) {\n      userPrompt = `${formattedState}\\n\\n${storedPrompt}`;\n    } else {\n      userPrompt = `${formattedState}\\n\\nReview the current session state and execute the next cycle of work.`;\n    }\n  }\n\n  const userPromptFilePath = `${sessionDir(cwd, sessionId)}/orchestrator-user-${cycleNum}.md`;\n  writeFileSync(userPromptFilePath, userPrompt, 'utf-8');\n  const claudeCmd = `claude --dangerously-skip-permissions --append-system-prompt \"$(cat '${promptFilePath}')\" \"$(cat '${userPromptFilePath}')\"`;\n\n  const paneId = tmux.createPane(windowId, cwd);\n\n  sessionOrchestratorPane.set(sessionId, paneId);\n  tmux.setPaneTitle(paneId, `orchestrator (${sessionId.slice(0, 8)})`);\n  tmux.setPaneStyle(paneId, ORCHESTRATOR_COLOR);\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}`);\n\n  await state.addOrchestratorCycle(cwd, sessionId, {\n    cycle: cycleNum,\n    timestamp: new Date().toISOString(),\n    agentsSpawned: [],\n    paneId,\n  });\n}\n\nfunction resolveOrchestratorPane(sessionId: string, cwd: string): string | undefined {\n  const memPane = sessionOrchestratorPane.get(sessionId);\n  if (memPane) return memPane;\n  const session = state.getSession(cwd, sessionId);\n  const lastCycle = session.orchestratorCycles[session.orchestratorCycles.length - 1];\n  return lastCycle?.paneId ?? undefined;\n}\n\nexport async function handleOrchestratorYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  const paneId = resolveOrchestratorPane(sessionId, cwd);\n  if (paneId) {\n    tmux.killPane(paneId);\n    sessionOrchestratorPane.delete(sessionId);\n  }\n\n  await state.completeOrchestratorCycle(cwd, sessionId, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const runningAgents = session.agents.filter(a => a.status === 'running');\n  if (runningAgents.length === 0) {\n    console.error(`[sisyphus] WARNING: Orchestrator yielded but no agents are running for session ${sessionId}`);\n  }\n}\n\nexport async function handleOrchestratorComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  const paneId = resolveOrchestratorPane(sessionId, cwd);\n\n  await state.completeOrchestratorCycle(cwd, sessionId);\n  await state.completeSession(cwd, sessionId, report);\n\n  if (paneId) {\n    tmux.killPane(paneId);\n    sessionOrchestratorPane.delete(sessionId);\n  }\n\n  sessionWindowMap.delete(sessionId);\n\n  console.log(`[sisyphus] Session ${sessionId} completed: ${report}`);\n}\n","import { execSync } from 'node:child_process';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV }).trim();\n}\n\nfunction execSafe(cmd: string): string | null {\n  try {\n    return exec(cmd);\n  } catch {\n    return null;\n  }\n}\n\nexport function getCurrentTmuxSession(): string {\n  const tmuxEnv = process.env['TMUX'];\n  if (!tmuxEnv) throw new Error('Not running inside tmux');\n  return exec('tmux display-message -p \"#{session_name}\"');\n}\n\nexport function createWindow(sessionName: string, windowName: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  exec(`tmux new-window -t \"${sessionName}\" -n \"${windowName}\"${cwdFlag} -P -F \"#{window_id}\"`);\n  return exec(`tmux display-message -t \"${sessionName}:${windowName}\" -p \"#{window_id}\"`);\n}\n\nexport function createPane(windowTarget: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  const paneId = exec(`tmux split-window -h -t \"${windowTarget}\"${cwdFlag} -P -F \"#{pane_id}\"`);\n  execSafe(`tmux select-layout -t \"${windowTarget}\" even-horizontal`);\n  return paneId;\n}\n\nexport function sendKeys(paneTarget: string, command: string): void {\n  exec(`tmux send-keys -t \"${paneTarget}\" ${shellQuote(command)} Enter`);\n}\n\nexport function killPane(paneTarget: string): void {\n  execSafe(`tmux kill-pane -t \"${paneTarget}\"`);\n}\n\nexport function killWindow(windowTarget: string): void {\n  execSafe(`tmux kill-window -t \"${windowTarget}\"`);\n}\n\nexport interface PaneInfo {\n  paneId: string;\n  panePid: string;\n}\n\nexport function listPanes(windowTarget: string): PaneInfo[] {\n  const output = execSafe(`tmux list-panes -t \"${windowTarget}\" -F \"#{pane_id} #{pane_pid}\"`);\n  if (!output) return [];\n  return output\n    .split('\\n')\n    .filter(Boolean)\n    .map(line => {\n      const [paneId, panePid] = line.split(' ');\n      return { paneId: paneId!, panePid: panePid! };\n    });\n}\n\nexport function setPaneTitle(paneTarget: string, title: string): void {\n  execSafe(`tmux select-pane -t \"${paneTarget}\" -T ${shellQuote(title)}`);\n}\n\nexport function setPaneStyle(paneTarget: string, color: string): void {\n  // pane-border-style is window-level in tmux 3.6 (last-write-wins across all panes).\n  // pane-border-format IS truly per-pane, so we colorize the border status text instead.\n  const fmt = `#[fg=${color},bold] #{pane_title} #[fg=${color}]#{pane_current_path} #[default]`;\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-border-format ${shellQuote(fmt)}`);\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-border-style \"fg=${color}\"`);\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-active-border-style \"fg=${color}\"`);\n}\n\nexport function sendSignal(paneTarget: string, signal: string): void {\n  const info = execSafe(`tmux list-panes -t \"${paneTarget}\" -F \"#{pane_pid}\"`);\n  if (!info) return;\n  const pid = info.split('\\n')[0]?.trim();\n  if (pid) {\n    execSafe(`kill -${signal} ${pid}`);\n  }\n}\n\nexport function selectLayout(windowTarget: string, layout: string = 'even-horizontal'): void {\n  execSafe(`tmux select-layout -t \"${windowTarget}\" ${layout}`);\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","export const ORCHESTRATOR_COLOR = 'yellow';\n\nconst AGENT_PALETTE = ['blue', 'green', 'magenta', 'cyan', 'red', 'white'] as const;\n\nconst sessionColorIndex = new Map<string, number>();\n\nexport function getNextColor(sessionId: string): string {\n  const idx = sessionColorIndex.get(sessionId) ?? 0;\n  const color = AGENT_PALETTE[idx % AGENT_PALETTE.length]!;\n  sessionColorIndex.set(sessionId, idx + 1);\n  return color;\n}\n\nexport function resetColors(sessionId: string): void {\n  sessionColorIndex.delete(sessionId);\n}\n","import { readFileSync, writeFileSync, mkdirSync, readdirSync, existsSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport type { Agent, AgentReport } from '../shared/types.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getNextColor } from './colors.js';\nimport { sessionDir, reportsDir, reportFilePath } from '../shared/paths.js';\n\nconst agentCounters = new Map<string, number>();\n\nexport function resetAgentCounter(sessionId: string, value: number = 0): void {\n  agentCounters.set(sessionId, value);\n}\n\nexport function clearAgentCounter(sessionId: string): void {\n  agentCounters.delete(sessionId);\n}\n\nfunction renderAgentSuffix(sessionId: string, instruction: string): string {\n  const templatePath = resolve(import.meta.dirname, '../templates/agent-suffix.md');\n  let template: string;\n  try {\n    template = readFileSync(templatePath, 'utf-8');\n  } catch {\n    template = `# Sisyphus Agent\\nSession: {{SESSION_ID}}\\nTask: {{INSTRUCTION}}`;\n  }\n  return template\n    .replace(/\\{\\{SESSION_ID\\}\\}/g, sessionId)\n    .replace(/\\{\\{INSTRUCTION\\}\\}/g, instruction);\n}\n\nexport interface SpawnAgentOpts {\n  sessionId: string;\n  cwd: string;\n  agentType: string;\n  name: string;\n  instruction: string;\n  windowId: string;\n}\n\nexport async function spawnAgent(opts: SpawnAgentOpts): Promise<Agent> {\n  const { sessionId, cwd, agentType, name, instruction, windowId } = opts;\n  const count = (agentCounters.get(sessionId) ?? 0) + 1;\n  agentCounters.set(sessionId, count);\n  const agentId = `agent-${String(count).padStart(3, '0')}`;\n  const color = getNextColor(sessionId);\n\n  const paneId = tmux.createPane(windowId, cwd);\n  tmux.setPaneTitle(paneId, `${name} (${agentId})`);\n  tmux.setPaneStyle(paneId, color);\n\n  const suffix = renderAgentSuffix(sessionId, instruction);\n  const suffixFilePath = `${sessionDir(cwd, sessionId)}/${agentId}-system.md`;\n  writeFileSync(suffixFilePath, suffix, 'utf-8');\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='${agentId}'`,\n  ].join(' && ');\n\n  const agentFlag = agentType ? ` --agent ${shellQuote(agentType)}` : '';\n  const claudeCmd = `claude --dangerously-skip-permissions${agentFlag} --append-system-prompt \"$(cat '${suffixFilePath}')\" ${shellQuote(instruction)}`;\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}`);\n\n  const agent: Agent = {\n    id: agentId,\n    name,\n    agentType,\n    color,\n    instruction,\n    status: 'running',\n    spawnedAt: new Date().toISOString(),\n    completedAt: null,\n    reports: [],\n    paneId,\n  };\n\n  await state.addAgent(cwd, sessionId, agent);\n  return agent;\n}\n\nfunction nextReportNumber(cwd: string, sessionId: string, agentId: string): string {\n  const dir = reportsDir(cwd, sessionId);\n  try {\n    const files = readdirSync(dir).filter(f => f.startsWith(`${agentId}-`) && !f.endsWith('-final.md'));\n    return String(files.length + 1).padStart(3, '0');\n  } catch {\n    return '001';\n  }\n}\n\nexport async function handleAgentReport(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  content: string,\n): Promise<void> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const num = nextReportNumber(cwd, sessionId, agentId);\n  const filePath = reportFilePath(cwd, sessionId, agentId, num);\n  writeFileSync(filePath, content, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'update',\n    filePath,\n    summary: content.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n}\n\nexport async function handleAgentSubmit(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  report: string,\n): Promise<boolean> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const filePath = reportFilePath(cwd, sessionId, agentId, 'final');\n  writeFileSync(filePath, report, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'final',\n    filePath,\n    summary: report.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'completed',\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  const agent = session.agents.find(a => a.id === agentId);\n  if (agent) {\n    tmux.killPane(agent.paneId);\n  }\n\n  return allAgentsDone(session);\n}\n\nexport async function handleAgentKilled(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  reason: string,\n): Promise<boolean> {\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'killed',\n    killedReason: reason,\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  return allAgentsDone(session);\n}\n\n// Note: this checks ALL running agents in the session, not just orchestrator-spawned ones.\n// Agents can also call `sisyphus spawn`, and those child agents are included here —\n// the orchestrator won't respawn until every agent (including agent-spawned ones) finishes.\nfunction allAgentsDone(session: import('../shared/types.js').Session): boolean {\n  const running = session.agents.filter(a => a.status === 'running');\n  return running.length === 0 && session.agents.length > 0;\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","import * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getOrchestratorPaneId } from './orchestrator.js';\nimport { handleAgentKilled } from './agent.js';\n\ntype RespawnCallback = (sessionId: string, cwd: string, windowId: string) => void;\n\nlet monitorInterval: ReturnType<typeof setInterval> | null = null;\nlet onAllAgentsDone: RespawnCallback | null = null;\n\nexport function setRespawnCallback(cb: RespawnCallback): void {\n  onAllAgentsDone = cb;\n}\n\nexport function startMonitor(pollIntervalMs: number = 1000): void {\n  if (monitorInterval) return;\n  monitorInterval = setInterval(() => {\n    pollAllSessions().catch(err => {\n      console.error('[sisyphus] Pane monitor error:', err);\n    });\n  }, pollIntervalMs);\n}\n\nexport function stopMonitor(): void {\n  if (monitorInterval) {\n    clearInterval(monitorInterval);\n    monitorInterval = null;\n  }\n}\n\nconst trackedSessions = new Map<string, { id: string; cwd: string; tmuxSession: string; windowId: string | null }>();\n\nexport function trackSession(sessionId: string, cwd: string, tmuxSession: string): void {\n  // windowId is registered separately via updateTrackedWindow after spawnOrchestrator sets it\n  const existing = trackedSessions.get(sessionId);\n  trackedSessions.set(sessionId, { id: sessionId, cwd, tmuxSession, windowId: existing ? existing.windowId : null });\n}\n\nexport function updateTrackedWindow(sessionId: string, windowId: string): void {\n  const entry = trackedSessions.get(sessionId);\n  if (!entry) throw new Error(`Cannot update window for untracked session: ${sessionId}`);\n  entry.windowId = windowId;\n}\n\nexport function untrackSession(sessionId: string): void {\n  trackedSessions.delete(sessionId);\n}\n\nasync function pollAllSessions(): Promise<void> {\n  for (const { id: sessionId, cwd, windowId } of trackedSessions.values()) {\n    if (windowId) {\n      await pollSession(sessionId, cwd, windowId);\n    }\n  }\n}\n\nasync function pollSession(sessionId: string, cwd: string, windowId: string): Promise<void> {\n  let session;\n  try {\n    session = state.getSession(cwd, sessionId);\n  } catch (err) {\n    console.error(`[sisyphus] Failed to read state for session ${sessionId}:`, err);\n    return;\n  }\n\n  if (session.status !== 'active') return;\n\n  const livePanes = tmux.listPanes(windowId);\n  if (livePanes.length === 0) return;\n\n  const livePaneIds = new Set(livePanes.map(p => p.paneId));\n\n  for (const agent of session.agents) {\n    if (agent.status !== 'running') continue;\n    if (!livePaneIds.has(agent.paneId)) {\n      const allDone = await handleAgentKilled(cwd, sessionId, agent.id, 'pane closed by user');\n      if (allDone && onAllAgentsDone) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  }\n\n  // Check orchestrator pane\n  const orchPaneId = getOrchestratorPaneId(sessionId);\n  if (orchPaneId && !livePaneIds.has(orchPaneId)) {\n    // Orchestrator pane disappeared without a yield command\n    const runningAgents = session.agents.filter(a => a.status === 'running');\n    if (runningAgents.length === 0) {\n      // No agents running and orchestrator gone — pause\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane disappeared`);\n    }\n  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+{"version":3,"sources":["../src/daemon/index.ts","../src/shared/config.ts","../src/daemon/server.ts","../src/daemon/session-manager.ts","../src/daemon/state.ts","../src/daemon/orchestrator.ts","../src/daemon/colors.ts","../src/daemon/tmux.ts","../src/daemon/agent.ts","../src/daemon/worktree.ts","../src/daemon/pane-monitor.ts"],"sourcesContent":["import { mkdirSync, readFileSync, writeFileSync, unlinkSync, existsSync } from 'node:fs';\nimport { globalDir, daemonPidPath, statePath } from '../shared/paths.js';\nimport { loadConfig } from '../shared/config.js';\nimport { startServer, stopServer, registerSessionCwd, registerSessionTmux, loadSessionRegistry } from './server.js';\nimport { startMonitor, stopMonitor, setRespawnCallback, trackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { onAllAgentsDone } from './session-manager.js';\nimport { resetAgentCounterFromState } from './agent.js';\nimport { setWindowId, setOrchestratorPaneId, getOrchestratorPaneId } from './orchestrator.js';\nimport { listPanes } from './tmux.js';\nimport * as stateModule from './state.js';\nimport type { Session } from '../shared/types.js';\n\nfunction ensureDirs(): void {\n  mkdirSync(globalDir(), { recursive: true });\n}\n\nfunction isProcessAlive(pid: number): boolean {\n  try {\n    process.kill(pid, 0);\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction readPid(): number | null {\n  const pidFile = daemonPidPath();\n  try {\n    const pid = parseInt(readFileSync(pidFile, 'utf-8').trim(), 10);\n    return pid && isProcessAlive(pid) ? pid : null;\n  } catch {\n    return null;\n  }\n}\n\nfunction acquirePidLock(): void {\n  const pid = readPid();\n  if (pid) {\n    console.error(`[sisyphus] Daemon already running (pid ${pid}). Use 'sisyphusd restart' or 'sisyphusd stop' first.`);\n    process.exit(0);\n  }\n  writeFileSync(daemonPidPath(), String(process.pid), 'utf-8');\n}\n\nfunction releasePidLock(): void {\n  try {\n    unlinkSync(daemonPidPath());\n  } catch {\n    // Already gone\n  }\n}\n\nfunction stopDaemon(): boolean {\n  const pid = readPid();\n  if (!pid) {\n    console.log('[sisyphus] Daemon is not running');\n    // Clean up stale pid file if it exists\n    releasePidLock();\n    return false;\n  }\n\n  console.log(`[sisyphus] Stopping daemon (pid ${pid})...`);\n  try {\n    process.kill(pid, 'SIGTERM');\n  } catch {\n    console.error(`[sisyphus] Failed to send SIGTERM to pid ${pid}`);\n    return false;\n  }\n\n  // Wait for process to exit (up to 5s)\n  const deadline = Date.now() + 5000;\n  while (Date.now() < deadline) {\n    if (!isProcessAlive(pid)) {\n      console.log('[sisyphus] Daemon stopped');\n      releasePidLock();\n      return true;\n    }\n    // Busy-wait in small increments (synchronous — fine for a CLI command)\n    const wait = Date.now() + 100;\n    while (Date.now() < wait) { /* spin */ }\n  }\n\n  console.error(`[sisyphus] Daemon (pid ${pid}) did not exit within 5s, sending SIGKILL`);\n  try {\n    process.kill(pid, 'SIGKILL');\n  } catch { /* already dead */ }\n  releasePidLock();\n  return true;\n}\n\nasync function recoverSessions(): Promise<void> {\n  const registry = loadSessionRegistry();\n  const entries = Object.entries(registry);\n\n  if (entries.length === 0) {\n    console.log('[sisyphus] No sessions to recover');\n    return;\n  }\n\n  let recovered = 0;\n  for (const [sessionId, cwd] of entries) {\n    const stateFile = statePath(cwd, sessionId);\n    if (!existsSync(stateFile)) {\n      continue;\n    }\n\n    try {\n      const session = JSON.parse(readFileSync(stateFile, 'utf-8')) as Session;\n      if (session.status === 'active' || session.status === 'paused') {\n        registerSessionCwd(sessionId, cwd);\n        resetAgentCounterFromState(sessionId, session.agents ?? []);\n\n        // Reconnect to tmux panes if info was persisted\n        if (session.tmuxSessionName && session.tmuxWindowId) {\n          const livePanes = listPanes(session.tmuxWindowId);\n          if (livePanes.length > 0) {\n            registerSessionTmux(sessionId, session.tmuxSessionName, session.tmuxWindowId);\n            setWindowId(sessionId, session.tmuxWindowId);\n            trackSession(sessionId, cwd, session.tmuxSessionName);\n            updateTrackedWindow(sessionId, session.tmuxWindowId);\n\n            // Recover orchestrator pane from last incomplete cycle\n            const lastIncompleteCycle = [...session.orchestratorCycles].reverse().find(c => !c.completedAt && c.paneId);\n            if (lastIncompleteCycle?.paneId) {\n              setOrchestratorPaneId(sessionId, lastIncompleteCycle.paneId);\n            }\n\n            console.log(`[sisyphus] Reconnected session ${sessionId} to tmux window ${session.tmuxWindowId}`);\n\n            // Detect sessions stuck in \"all agents done, no orchestrator\" state\n            if (session.status === 'active' && session.agents.length > 0) {\n              const hasRunningAgents = session.agents.some(a => a.status === 'running');\n              if (!hasRunningAgents) {\n                const livePaneIds = new Set(livePanes.map(p => p.paneId));\n                const orchestratorPaneId = getOrchestratorPaneId(sessionId);\n                const orchestratorAlive = orchestratorPaneId && livePaneIds.has(orchestratorPaneId);\n                if (!orchestratorAlive) {\n                  console.log(`[sisyphus] Detected stuck session ${sessionId} on recovery: triggering orchestrator respawn`);\n                  await onAllAgentsDone(sessionId, cwd, session.tmuxWindowId!);\n                }\n              }\n            }\n          } else {\n            // Window gone — pause the session so user can `sisyphus resume`\n            if (session.status === 'active') {\n              await stateModule.updateSessionStatus(cwd, sessionId, 'paused');\n              console.log(`[sisyphus] Session ${sessionId} paused: tmux window no longer exists`);\n            }\n          }\n        }\n\n        recovered++;\n      }\n    } catch {\n      console.error(`[sisyphus] Failed to read session state for ${sessionId}, skipping`);\n    }\n  }\n\n  console.log(`[sisyphus] Recovered ${recovered} session(s) from registry`);\n}\n\nasync function startDaemon(): Promise<void> {\n  console.log('[sisyphus] Starting daemon...');\n  ensureDirs();\n  acquirePidLock();\n\n  const config = loadConfig(process.cwd());\n\n  setRespawnCallback(onAllAgentsDone);\n\n  await startServer();\n  startMonitor(config.pollIntervalMs);\n\n  await recoverSessions();\n\n  const shutdown = async () => {\n    console.log('[sisyphus] Shutting down...');\n    stopMonitor();\n    await stopServer();\n    releasePidLock();\n    process.exit(0);\n  };\n\n  process.on('SIGTERM', shutdown);\n  process.on('SIGINT', shutdown);\n}\n\nconst command = process.argv[2];\n\nswitch (command) {\n  case 'stop':\n    stopDaemon();\n    break;\n\n  case 'restart': {\n    stopDaemon();\n    // Small delay to let socket release\n    const wait = Date.now() + 500;\n    while (Date.now() < wait) { /* spin */ }\n    startDaemon().catch((err) => {\n      console.error('[sisyphus] Fatal error:', err);\n      process.exit(1);\n    });\n    break;\n  }\n\n  case 'start':\n  case undefined:\n    startDaemon().catch((err) => {\n      console.error('[sisyphus] Fatal error:', err);\n      process.exit(1);\n    });\n    break;\n\n  default:\n    console.error(`[sisyphus] Unknown command: ${command}`);\n    console.error('Usage: sisyphusd [start|stop|restart]');\n    process.exit(1);\n}\n","import { readFileSync } from 'node:fs';\nimport { globalConfigPath, projectConfigPath } from './paths.js';\n\nexport interface WorktreeConfig {\n  copy?: string[];\n  clone?: string[];\n  symlink?: string[];\n  init?: string;\n}\n\nexport interface Config {\n  model?: string;\n  tmuxSession?: string;\n  orchestratorPrompt?: string;\n  pollIntervalMs?: number;\n}\n\nconst DEFAULT_CONFIG: Config = {\n  pollIntervalMs: 1000,\n};\n\nfunction readJsonFile(filePath: string): Partial<Config> {\n  try {\n    const content = readFileSync(filePath, 'utf-8');\n    return JSON.parse(content) as Partial<Config>;\n  } catch {\n    return {};\n  }\n}\n\nexport function loadConfig(cwd: string): Config {\n  const global = readJsonFile(globalConfigPath());\n  const project = readJsonFile(projectConfigPath(cwd));\n  return { ...DEFAULT_CONFIG, ...global, ...project };\n}\n","import { createServer, type Server } from 'node:net';\nimport { unlinkSync, existsSync, writeFileSync, readFileSync, mkdirSync } from 'node:fs';\nimport { socketPath, globalDir } from '../shared/paths.js';\nimport { join } from 'node:path';\nimport type { Request, Response } from '../shared/protocol.js';\nimport * as sessionManager from './session-manager.js';\n\nlet server: Server | null = null;\n\n// Track the cwd for each session so we can route requests\nconst sessionCwdMap = new Map<string, string>();\n// Track the originating tmux session for each sisyphus session\nconst sessionTmuxMap = new Map<string, string>();\n// Track the originating tmux window for each sisyphus session\nconst sessionWindowMap = new Map<string, string>();\n\nexport function getSessionCwd(sessionId: string): string | undefined {\n  return sessionCwdMap.get(sessionId);\n}\n\nexport function getSessionTmux(sessionId: string): string | undefined {\n  return sessionTmuxMap.get(sessionId);\n}\n\nfunction registryPath(): string {\n  return join(globalDir(), 'session-registry.json');\n}\n\nfunction persistSessionRegistry(): void {\n  const dir = globalDir();\n  mkdirSync(dir, { recursive: true });\n  const registry: Record<string, string> = {};\n  for (const [id, cwd] of sessionCwdMap) {\n    registry[id] = cwd;\n  }\n  writeFileSync(registryPath(), JSON.stringify(registry, null, 2), 'utf-8');\n}\n\nexport function loadSessionRegistry(): Record<string, string> {\n  const p = registryPath();\n  if (!existsSync(p)) return {};\n  try {\n    return JSON.parse(readFileSync(p, 'utf-8')) as Record<string, string>;\n  } catch {\n    return {};\n  }\n}\n\nexport function registerSessionCwd(sessionId: string, cwd: string): void {\n  sessionCwdMap.set(sessionId, cwd);\n  persistSessionRegistry();\n}\n\nexport function registerSessionTmux(sessionId: string, tmuxSession: string, windowId: string): void {\n  sessionTmuxMap.set(sessionId, tmuxSession);\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nasync function handleRequest(req: Request): Promise<Response> {\n  try {\n    switch (req.type) {\n      case 'start': {\n        const session = await sessionManager.startSession(req.task, req.cwd, req.tmuxSession, req.tmuxWindow);\n        registerSessionCwd(session.id, req.cwd);\n        sessionTmuxMap.set(session.id, req.tmuxSession);\n        sessionWindowMap.set(session.id, req.tmuxWindow);\n        return { ok: true, data: { sessionId: session.id } };\n      }\n\n      case 'spawn': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = await sessionManager.handleSpawn(req.sessionId, cwd, req.agentType, req.name, req.instruction, req.worktree);\n        return { ok: true, data: { agentId: result.agentId } };\n      }\n\n      case 'submit': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const windowId = sessionWindowMap.get(req.sessionId);\n        if (!windowId) return { ok: false, error: `No tmux window found for session: ${req.sessionId}` };\n        await sessionManager.handleSubmit(cwd, req.sessionId, req.agentId, req.report, windowId);\n        return { ok: true };\n      }\n\n      case 'report': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleReport(cwd, req.sessionId, req.agentId, req.content);\n        return { ok: true };\n      }\n\n      case 'yield': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleYield(req.sessionId, cwd, req.nextPrompt);\n        return { ok: true };\n      }\n\n      case 'complete': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleComplete(req.sessionId, cwd, req.report);\n        return { ok: true };\n      }\n\n      case 'status': {\n        if (req.sessionId) {\n          const cwd = sessionCwdMap.get(req.sessionId);\n          if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n          const session = sessionManager.getSessionStatus(cwd, req.sessionId);\n          return { ok: true, data: { session: session as unknown as Record<string, unknown> } };\n        }\n        return { ok: true, data: { message: 'daemon running' } };\n      }\n\n      case 'list': {\n        const allSessions: Array<Record<string, unknown>> = [];\n        if (req.all) {\n          // List sessions across all known cwds\n          const seenCwds = new Set<string>();\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            const sessions = sessionManager.listSessions(cwd);\n            allSessions.push(...sessions.map(s => ({ ...s, cwd } as unknown as Record<string, unknown>)));\n          }\n        } else {\n          // List sessions for the requesting cwd only\n          const sessions = sessionManager.listSessions(req.cwd);\n          allSessions.push(...sessions.map(s => ({ ...s, cwd: req.cwd } as unknown as Record<string, unknown>)));\n          // Count total across all cwds for the hint\n          let totalCount = allSessions.length;\n          const seenCwds = new Set<string>([req.cwd]);\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            totalCount += sessionManager.listSessions(cwd).length;\n          }\n          if (totalCount > allSessions.length) {\n            return { ok: true, data: { sessions: allSessions, totalCount, filtered: true } };\n          }\n        }\n        return { ok: true, data: { sessions: allSessions } };\n      }\n\n      case 'resume': {\n        let cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) {\n          // Session not in memory — try to recover from disk using the cwd provided by CLI\n          const stateFile = `${req.cwd}/.sisyphus/sessions/${req.sessionId}/state.json`;\n          if (existsSync(stateFile)) {\n            cwd = req.cwd;\n            registerSessionCwd(req.sessionId, cwd);\n          } else {\n            return { ok: false, error: `Unknown session: ${req.sessionId}. No state.json found at ${stateFile}` };\n          }\n        }\n        sessionTmuxMap.set(req.sessionId, req.tmuxSession);\n        sessionWindowMap.set(req.sessionId, req.tmuxWindow);\n        const session = await sessionManager.resumeSession(req.sessionId, cwd, req.tmuxSession, req.tmuxWindow, req.message);\n        return { ok: true, data: { sessionId: session.id, status: session.status } };\n      }\n\n      case 'register_claude_session': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleRegisterClaudeSession(cwd, req.sessionId, req.agentId, req.claudeSessionId);\n        return { ok: true };\n      }\n\n      case 'kill': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const killedAgents = await sessionManager.handleKill(req.sessionId, cwd);\n        sessionCwdMap.delete(req.sessionId);\n        sessionTmuxMap.delete(req.sessionId);\n        sessionWindowMap.delete(req.sessionId);\n        persistSessionRegistry();\n        return { ok: true, data: { killedAgents, sessionId: req.sessionId } };\n      }\n\n      default:\n        return { ok: false, error: `Unknown request type: ${(req as Record<string, unknown>).type}` };\n    }\n  } catch (err) {\n    const message = err instanceof Error ? err.message : String(err);\n    return { ok: false, error: message };\n  }\n}\n\nexport function startServer(): Promise<Server> {\n  return new Promise((resolve, reject) => {\n    const sock = socketPath();\n\n    if (existsSync(sock)) {\n      unlinkSync(sock);\n    }\n\n    server = createServer((conn) => {\n      let buffer = '';\n\n      conn.on('data', (chunk) => {\n        buffer += chunk.toString();\n        const lines = buffer.split('\\n');\n        buffer = lines.pop()!;\n\n        for (const line of lines) {\n          if (!line.trim()) continue;\n          let req: Request;\n          try {\n            req = JSON.parse(line) as Request;\n          } catch {\n            conn.write(JSON.stringify({ ok: false, error: 'Invalid JSON' }) + '\\n');\n            continue;\n          }\n\n          handleRequest(req).then((res) => {\n            conn.write(JSON.stringify(res) + '\\n');\n          });\n        }\n      });\n\n      conn.on('error', (err) => {\n        console.error('[sisyphus] Connection error:', err.message);\n      });\n    });\n\n    server.on('error', reject);\n\n    server.listen(sock, () => {\n      console.log(`[sisyphus] Daemon listening on ${sock}`);\n      resolve(server!);\n    });\n  });\n}\n\nexport function stopServer(): Promise<void> {\n  return new Promise((resolve) => {\n    if (!server) {\n      resolve();\n      return;\n    }\n    server.close(() => {\n      const sock = socketPath();\n      if (existsSync(sock)) {\n        unlinkSync(sock);\n      }\n      server = null;\n      resolve();\n    });\n  });\n}\n","import { v4 as uuidv4 } from 'uuid';\nimport { existsSync, readdirSync } from 'node:fs';\nimport * as state from './state.js';\nimport * as orchestrator from './orchestrator.js';\nimport * as tmux from './tmux.js';\nimport { spawnAgent, resetAgentCounterFromState, clearAgentCounter, handleAgentSubmit, handleAgentReport } from './agent.js';\nimport { trackSession, untrackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { resetColors } from './colors.js';\nimport { sessionsDir } from '../shared/paths.js';\nimport type { Session } from '../shared/types.js';\nimport { mergeWorktrees, cleanupWorktree } from './worktree.js';\n\nexport async function startSession(task: string, cwd: string, tmuxSession: string, windowId: string): Promise<Session> {\n  const sessionId = uuidv4();\n  const session = state.createSession(sessionId, task, cwd);\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId);\n  updateTrackedWindow(sessionId, windowId);\n\n  return session;\n}\n\nexport async function resumeSession(sessionId: string, cwd: string, tmuxSession: string, windowId: string, message?: string): Promise<Session> {\n  const session = state.getSession(cwd, sessionId);\n\n  if (session.status !== 'active') {\n    // Determine which agents still have live panes\n    const livePaneIds = new Set<string>();\n    if (session.tmuxWindowId) {\n      const panes = tmux.listPanes(session.tmuxWindowId);\n      for (const pane of panes) {\n        livePaneIds.add(pane.paneId);\n      }\n    }\n\n    // Mark running agents as \"lost\" only if their pane is gone (or no window ID to check)\n    for (const agent of session.agents) {\n      if (agent.status === 'running') {\n        const isAlive = agent.paneId != null && livePaneIds.has(agent.paneId);\n        if (!isAlive) {\n          await state.updateAgent(cwd, sessionId, agent.id, {\n            status: 'lost',\n            completedAt: new Date().toISOString(),\n            killedReason: 'session resumed — agent was still running',\n          });\n        }\n      }\n    }\n  }\n\n  await state.updateSessionStatus(cwd, sessionId, 'active');\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  // Reset counters based on existing agents\n  resetAgentCounterFromState(sessionId, session.agents);\n  resetColors(sessionId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId, message);\n  updateTrackedWindow(sessionId, windowId);\n\n  return state.getSession(cwd, sessionId);\n}\n\nexport function getSessionStatus(cwd: string, sessionId: string): Session {\n  return state.getSession(cwd, sessionId);\n}\n\nexport function listSessions(cwd: string): Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> {\n  const dir = sessionsDir(cwd);\n  if (!existsSync(dir)) return [];\n\n  const entries = readdirSync(dir, { withFileTypes: true });\n  const sessions: Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> = [];\n\n  for (const entry of entries) {\n    if (!entry.isDirectory()) continue;\n    try {\n      const session = state.getSession(cwd, entry.name);\n      sessions.push({\n        id: session.id,\n        task: session.task,\n        status: session.status,\n        createdAt: session.createdAt,\n        agentCount: session.agents.length,\n      });\n    } catch (err) {\n      console.error(`[sisyphus] Failed to read session ${entry.name}:`, err);\n    }\n  }\n\n  return sessions;\n}\n\nexport function onAllAgentsDone(sessionId: string, cwd: string, windowId: string): void {\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  // Merge any worktree agents before respawning orchestrator\n  const worktreeAgents = session.agents.filter(a => a.worktreePath && a.mergeStatus === 'pending');\n  if (worktreeAgents.length > 0) {\n    const results = mergeWorktrees(cwd, worktreeAgents);\n    for (const result of results) {\n      const mergeStatus = result.status === 'conflict' ? 'conflict' as const : 'merged' as const;\n      state.updateAgent(cwd, sessionId, result.agentId, {\n        mergeStatus,\n        mergeDetails: result.conflictDetails,\n      }).catch((err: unknown) => console.error(`[sisyphus] Failed to update merge status for ${result.agentId}:`, err));\n    }\n  }\n\n  // Delay to let /exit finish quitting the previous Claude session\n  setTimeout(() => {\n    orchestrator.spawnOrchestrator(sessionId, cwd, windowId)\n      .then(() => updateTrackedWindow(sessionId, windowId))\n      .catch((err: unknown) => console.error(`[sisyphus] Failed to respawn orchestrator for session ${sessionId}:`, err));\n  }, 2000);\n}\n\nexport async function handleSpawn(\n  sessionId: string,\n  cwd: string,\n  agentType: string,\n  name: string,\n  instruction: string,\n  worktree?: boolean,\n): Promise<{ agentId: string }> {\n  const windowId = orchestrator.getWindowId(sessionId);\n  if (!windowId) throw new Error(`No tmux window found for session ${sessionId}`);\n\n  const agent = await spawnAgent({\n    sessionId,\n    cwd,\n    agentType,\n    name,\n    instruction,\n    windowId,\n    worktree,\n  });\n\n  await state.appendAgentToLastCycle(cwd, sessionId, agent.id);\n\n  return { agentId: agent.id };\n}\n\nexport async function handleSubmit(cwd: string, sessionId: string, agentId: string, report: string, windowId: string): Promise<void> {\n  const allDone = await handleAgentSubmit(cwd, sessionId, agentId, report);\n  if (allDone) {\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n\nexport async function handleReport(cwd: string, sessionId: string, agentId: string, content: string): Promise<void> {\n  await handleAgentReport(cwd, sessionId, agentId, content);\n}\n\nexport async function handleYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  await orchestrator.handleOrchestratorYield(sessionId, cwd, nextPrompt);\n}\n\nexport async function handleComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await orchestrator.handleOrchestratorComplete(sessionId, cwd, report);\n}\n\nexport async function handleRegisterClaudeSession(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  claudeSessionId: string,\n): Promise<void> {\n  await state.updateAgent(cwd, sessionId, agentId, { claudeSessionId });\n}\n\nexport async function handleKill(sessionId: string, cwd: string): Promise<number> {\n  const session = state.getSession(cwd, sessionId);\n  const windowId = orchestrator.getWindowId(sessionId);\n\n  // Kill all running agents\n  let killedAgents = 0;\n  for (const agent of session.agents) {\n    if (agent.status === 'running') {\n      await state.updateAgent(cwd, sessionId, agent.id, {\n        status: 'killed',\n        killedReason: 'session killed by user',\n        completedAt: new Date().toISOString(),\n      });\n      killedAgents++;\n    }\n  }\n\n  // Clean up worktrees for agents that had them\n  for (const agent of session.agents) {\n    if (agent.worktreePath && agent.branchName) {\n      cleanupWorktree(cwd, agent.worktreePath, agent.branchName);\n    }\n  }\n\n  // Kill the orchestrator pane if it exists\n  const orchPaneId = orchestrator.getOrchestratorPaneId(sessionId);\n  if (orchPaneId) {\n    tmux.killPane(orchPaneId);\n  }\n\n  // Mark session as completed\n  await state.updateSessionStatus(cwd, sessionId, 'completed');\n\n  // Untrack from pane monitor\n  untrackSession(sessionId);\n\n  // Kill the entire tmux window\n  if (windowId) {\n    tmux.killWindow(windowId);\n  }\n\n  // Clean up agent counter\n  clearAgentCounter(sessionId);\n\n  return killedAgents;\n}\n","import { readFileSync, writeFileSync, mkdirSync, renameSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport { randomUUID } from 'node:crypto';\nimport type { Session, Agent, AgentReport, OrchestratorCycle, SessionStatus } from '../shared/types.js';\nimport { statePath, sessionDir, contextDir, promptsDir, planPath, logsPath } from '../shared/paths.js';\n\nconst PLAN_SEED = `---\ndescription: >\n  Living document of what still needs to happen. Write your remaining work plan\n  here: phases, next steps, file references, open questions. Remove or collapse\n  items as they're completed so this file only reflects outstanding work. The\n  orchestrator sees this every cycle — keep it focused and current.\n---\n`;\n\nconst LOGS_SEED = `---\ndescription: >\n  Session memory. Record important observations, decisions, and findings here.\n  This is your persistent memory across cycles: things you tried, what\n  worked/failed, design decisions and their rationale, gotchas discovered during\n  implementation. Unlike plan.md, entries here accumulate — they're a log.\n---\n`;\n\n// Per-session mutex to prevent read-modify-write races\nconst sessionLocks = new Map<string, Promise<void>>();\n\nasync function withSessionLock<T>(sessionId: string, fn: () => T): Promise<T> {\n  const prev = sessionLocks.get(sessionId) ?? Promise.resolve();\n  let resolve: () => void;\n  const next = new Promise<void>(r => { resolve = r; });\n  sessionLocks.set(sessionId, next);\n  await prev;\n  try {\n    return fn();\n  } finally {\n    resolve!();\n  }\n}\n\nfunction atomicWrite(filePath: string, data: string): void {\n  const dir = dirname(filePath);\n  const tmpPath = join(dir, `.state.${randomUUID()}.tmp`);\n  writeFileSync(tmpPath, data, 'utf-8');\n  renameSync(tmpPath, filePath);\n}\n\nexport function createSession(id: string, task: string, cwd: string): Session {\n  const dir = sessionDir(cwd, id);\n  mkdirSync(dir, { recursive: true });\n  mkdirSync(contextDir(cwd, id), { recursive: true });\n  mkdirSync(promptsDir(cwd, id), { recursive: true });\n\n  writeFileSync(planPath(cwd, id), PLAN_SEED, 'utf-8');\n  writeFileSync(logsPath(cwd, id), LOGS_SEED, 'utf-8');\n\n  const session: Session = {\n    id,\n    task,\n    cwd,\n    status: 'active',\n    createdAt: new Date().toISOString(),\n    agents: [],\n    orchestratorCycles: [],\n  };\n\n  atomicWrite(statePath(cwd, id), JSON.stringify(session, null, 2));\n  return session;\n}\n\nexport function getSession(cwd: string, sessionId: string): Session {\n  const content = readFileSync(statePath(cwd, sessionId), 'utf-8');\n  return JSON.parse(content) as Session;\n}\n\nfunction saveSession(session: Session): void {\n  atomicWrite(statePath(session.cwd, session.id), JSON.stringify(session, null, 2));\n}\n\nexport async function addAgent(cwd: string, sessionId: string, agent: Agent): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.agents.push(agent);\n    saveSession(session);\n  });\n}\n\nexport async function updateAgent(cwd: string, sessionId: string, agentId: string, updates: Partial<Agent>): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    Object.assign(agent, updates);\n    saveSession(session);\n  });\n}\n\nexport async function addOrchestratorCycle(cwd: string, sessionId: string, cycle: OrchestratorCycle): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.orchestratorCycles.push(cycle);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionStatus(cwd: string, sessionId: string, status: SessionStatus, completionReport?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = status;\n    if (completionReport !== undefined) {\n      session.completionReport = completionReport;\n    }\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentToLastCycle(cwd: string, sessionId: string, agentId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    cycles[cycles.length - 1]!.agentsSpawned.push(agentId);\n    saveSession(session);\n  });\n}\n\nexport async function completeSession(cwd: string, sessionId: string, report: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = 'completed';\n    session.completedAt = new Date().toISOString();\n    session.completionReport = report;\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentReport(cwd: string, sessionId: string, agentId: string, entry: AgentReport): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    agent.reports.push(entry);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionTmux(cwd: string, sessionId: string, tmuxSessionName: string, tmuxWindowId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.tmuxSessionName = tmuxSessionName;\n    session.tmuxWindowId = tmuxWindowId;\n    saveSession(session);\n  });\n}\n\nexport async function completeOrchestratorCycle(cwd: string, sessionId: string, nextPrompt?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    const cycle = cycles[cycles.length - 1]!;\n    cycle.completedAt = new Date().toISOString();\n    if (nextPrompt) cycle.nextPrompt = nextPrompt;\n    saveSession(session);\n  });\n}\n","import { existsSync, readdirSync, readFileSync, writeFileSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport { contextDir, logsPath, planPath, projectOrchestratorPromptPath, promptsDir, worktreeConfigPath } from '../shared/paths.js';\nimport type { Agent, Session } from '../shared/types.js';\nimport { ORCHESTRATOR_COLOR } from './colors.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nconst sessionWindowMap = new Map<string, string>();\nconst sessionOrchestratorPane = new Map<string, string>();\n\nexport function getWindowId(sessionId: string): string | undefined {\n  return sessionWindowMap.get(sessionId);\n}\n\nexport function setWindowId(sessionId: string, windowId: string): void {\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nexport function getOrchestratorPaneId(sessionId: string): string | undefined {\n  return sessionOrchestratorPane.get(sessionId);\n}\n\nexport function setOrchestratorPaneId(sessionId: string, paneId: string): void {\n  sessionOrchestratorPane.set(sessionId, paneId);\n}\n\nfunction loadOrchestratorPrompt(cwd: string): string {\n  const projectPath = projectOrchestratorPromptPath(cwd);\n  if (existsSync(projectPath)) {\n    return readFileSync(projectPath, 'utf-8');\n  }\n  const bundledPath = resolve(import.meta.dirname, '../templates/orchestrator.md');\n  return readFileSync(bundledPath, 'utf-8');\n}\n\nfunction formatStateForOrchestrator(session: Session): string {\n  const shortId = session.id.slice(0, 8);\n  const cycleNum = session.orchestratorCycles.length;\n\n  const ctxDir = contextDir(session.cwd, session.id);\n  let contextLines: string;\n  if (existsSync(ctxDir)) {\n    const files = readdirSync(ctxDir);\n    contextLines = files.length > 0 ? files.map(f => `- ${f}`).join('\\n') : '  (none)';\n  } else {\n    contextLines = '  (none)';\n  }\n\n  const planFile = planPath(session.cwd, session.id);\n  const planRef = existsSync(planFile) ? `@${planFile}` : '(empty)';\n\n  const logsFile = logsPath(session.cwd, session.id);\n  const logsRef = existsSync(logsFile) ? `@${logsFile}` : '(empty)';\n\n  const agentLines = session.agents.length > 0\n    ? session.agents.map((a: Agent) => {\n        const header = `- ${a.id} (${a.name}): ${a.status} — ${a.reports.length} report(s)`;\n        if (a.reports.length === 0) return header;\n        let updateNum = 0;\n        const reportLines = a.reports.map(r => {\n          const label = r.type === 'final' ? '[final]' : `[update ${String(++updateNum).padStart(3, '0')}]`;\n          return `  ${label} \"${r.summary}\" → ${r.filePath}`;\n        });\n        return [header, ...reportLines].join('\\n');\n      }).join('\\n')\n    : '  (none)';\n\n  const cycleLines = session.orchestratorCycles.length > 0\n    ? session.orchestratorCycles.map(c => {\n        const spawnedList = c.agentsSpawned.length > 0 ? c.agentsSpawned.join(', ') : '(none)';\n        return `Cycle ${c.cycle}: Spawned ${spawnedList}`;\n      }).join('\\n')\n    : '  (none)';\n\n  // Worktree status — only if any agents have worktree info\n  const worktreeAgents = session.agents.filter(a => a.worktreePath);\n  let worktreeSection = '';\n  if (worktreeAgents.length > 0) {\n    const wtLines = worktreeAgents.map((a: Agent) => {\n      if (a.mergeStatus === 'conflict') {\n        return `- ${a.id}: conflict — ${a.mergeDetails ?? 'unknown'}\\n  Branch: ${a.branchName}\\n  Worktree: ${a.worktreePath}`;\n      }\n      const status = a.mergeStatus ?? 'pending';\n      return `- ${a.id}: ${status} (branch ${a.branchName})`;\n    }).join('\\n');\n    worktreeSection = `\\n\\n## Worktrees\\n${wtLines}`;\n  }\n\n  // Worktree hint\n  const worktreeHint = existsSync(worktreeConfigPath(session.cwd))\n    ? 'Worktree config active (`.sisyphus/worktree.json`). Use `--worktree` flag with `sisyphus spawn` to isolate agents in their own worktrees. Recommended for feature work, especially with potential file overlap.'\n    : 'No worktree configuration found. If this session involves parallel work where agents may edit overlapping files, use the `git-management` skill to set up `.sisyphus/worktree.json` and enable worktree isolation.';\n\n  return `<state>\nsession: ${shortId} (cycle ${cycleNum})\ntask: ${session.task}\nstatus: ${session.status}\n\n## Plan\n${planRef}\n\n## Logs\n${logsRef}\n\n## Agents\n${agentLines}${worktreeSection}\n\n## Previous Cycles\n${cycleLines}\n\n## Context Files\n${contextLines}\n\n## Git Worktrees\n${worktreeHint}\n</state>`;\n}\n\nexport async function spawnOrchestrator(sessionId: string, cwd: string, windowId: string, message?: string): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  const basePrompt = loadOrchestratorPrompt(cwd);\n  const formattedState = formatStateForOrchestrator(session);\n\n  // System prompt: template only (no state)\n  const cycleNum = session.orchestratorCycles.length + 1;\n  const promptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-system-${cycleNum}.md`;\n  writeFileSync(promptFilePath, basePrompt, 'utf-8');\n\n  sessionWindowMap.set(sessionId, windowId);\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='orchestrator'`,\n  ].join(' && ');\n\n  // User message: state block + contextual prompt\n  let userPrompt: string;\n  if (message) {\n    userPrompt = `${formattedState}\\n\\nThe user resumed this session with new instructions: ${message}`;\n  } else {\n    // Check last completed cycle for a stored nextPrompt\n    const lastCycle = [...session.orchestratorCycles].reverse().find(c => c.completedAt);\n    const storedPrompt = lastCycle?.nextPrompt;\n    if (storedPrompt) {\n      userPrompt = `${formattedState}\\n\\n${storedPrompt}`;\n    } else {\n      userPrompt = `${formattedState}\\n\\nReview the current session and delegate the next cycle of work.`;\n    }\n  }\n\n  const userPromptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-user-${cycleNum}.md`;\n  writeFileSync(userPromptFilePath, userPrompt, 'utf-8');\n  const pluginPath = resolve(import.meta.dirname, '../templates/orchestrator-plugin');\n  const settingsPath = resolve(import.meta.dirname, '../templates/orchestrator-settings.json');\n  const claudeCmd = `claude --dangerously-skip-permissions --settings \"${settingsPath}\" --plugin-dir \"${pluginPath}\" --append-system-prompt \"$(cat '${promptFilePath}')\" \"$(cat '${userPromptFilePath}')\"`;\n\n  const paneId = tmux.createPane(windowId, cwd);\n\n  sessionOrchestratorPane.set(sessionId, paneId);\n  tmux.setPaneTitle(paneId, `orchestrator (${sessionId.slice(0, 8)})`);\n  tmux.setPaneStyle(paneId, ORCHESTRATOR_COLOR);\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}`);\n\n  await state.addOrchestratorCycle(cwd, sessionId, {\n    cycle: cycleNum,\n    timestamp: new Date().toISOString(),\n    agentsSpawned: [],\n    paneId,\n  });\n}\n\nfunction resolveOrchestratorPane(sessionId: string, cwd: string): string | undefined {\n  const memPane = sessionOrchestratorPane.get(sessionId);\n  if (memPane) return memPane;\n  const session = state.getSession(cwd, sessionId);\n  const lastCycle = session.orchestratorCycles[session.orchestratorCycles.length - 1];\n  return lastCycle?.paneId ?? undefined;\n}\n\nexport async function handleOrchestratorYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  const paneId = resolveOrchestratorPane(sessionId, cwd);\n  if (paneId) {\n    tmux.killPane(paneId);\n    sessionOrchestratorPane.delete(sessionId);\n  }\n\n  const windowId = sessionWindowMap.get(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  await state.completeOrchestratorCycle(cwd, sessionId, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const runningAgents = session.agents.filter(a => a.status === 'running');\n  if (runningAgents.length === 0) {\n    console.error(`[sisyphus] WARNING: Orchestrator yielded but no agents are running for session ${sessionId}`);\n  }\n}\n\nexport async function handleOrchestratorComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await state.completeOrchestratorCycle(cwd, sessionId);\n  await state.completeSession(cwd, sessionId, report);\n\n  console.log(`[sisyphus] Session ${sessionId} completed: ${report}`);\n}\n\nexport function cleanupSessionMaps(sessionId: string): void {\n  sessionOrchestratorPane.delete(sessionId);\n  sessionWindowMap.delete(sessionId);\n}\n","import { readFileSync } from 'node:fs';\nimport { homedir } from 'node:os';\nimport { join } from 'node:path';\n\nexport const ORCHESTRATOR_COLOR = 'yellow';\n\nconst AGENT_PALETTE = ['blue', 'green', 'magenta', 'cyan', 'red', 'white'] as const;\n\nconst TMUX_COLOR_MAP: Record<string, string> = {\n  orange: 'colour208',\n  teal: 'colour6',\n};\n\nfunction normalizeTmuxColor(color: string): string {\n  return TMUX_COLOR_MAP[color] ?? color;\n}\n\nconst sessionColorIndex = new Map<string, number>();\n\nexport function getNextColor(sessionId: string): string {\n  const idx = sessionColorIndex.get(sessionId) ?? 0;\n  const color = AGENT_PALETTE[idx % AGENT_PALETTE.length]!;\n  sessionColorIndex.set(sessionId, idx + 1);\n  return color;\n}\n\nexport function resetColors(sessionId: string): void {\n  sessionColorIndex.delete(sessionId);\n}\n\nfunction extractFrontmatterColor(content: string): string | null {\n  const match = content.match(/^---\\n([\\s\\S]*?)\\n---/);\n  if (!match) return null;\n  const colorMatch = match[1]!.match(/^color:\\s*(.+)$/m);\n  return colorMatch ? colorMatch[1]!.trim() : null;\n}\n\nfunction findPluginInstallPath(namespace: string): string | null {\n  try {\n    const registryPath = join(homedir(), '.claude', 'plugins', 'installed_plugins.json');\n    const registry = JSON.parse(readFileSync(registryPath, 'utf-8'));\n    for (const key of Object.keys(registry)) {\n      if (key.startsWith(`${namespace}@`)) {\n        return registry[key].installPath ?? null;\n      }\n    }\n  } catch {\n    // File missing, parse error, or no match\n  }\n  return null;\n}\n\nexport function resolveAgentTypeColor(agentType: string, pluginDir: string, cwd: string): string | null {\n  if (!agentType) return null;\n\n  let namespace: string | undefined;\n  let name: string;\n\n  if (agentType.includes(':')) {\n    [namespace, name] = agentType.split(':', 2) as [string, string];\n  } else {\n    name = agentType;\n  }\n\n  const searchPaths: string[] = [];\n\n  if (namespace) {\n    // Bundled (handles sisyphus:* via pluginDir)\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n    // Installed plugin\n    const installPath = findPluginInstallPath(namespace);\n    if (installPath) {\n      searchPaths.push(join(installPath, 'agents', `${name}.md`));\n    }\n  } else {\n    // Project-local\n    searchPaths.push(join(cwd, '.claude', 'agents', `${name}.md`));\n    // User-global\n    searchPaths.push(join(homedir(), '.claude', 'agents', `${name}.md`));\n    // Bundled\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n  }\n\n  for (const path of searchPaths) {\n    try {\n      const content = readFileSync(path, 'utf-8');\n      const color = extractFrontmatterColor(content);\n      if (color) return normalizeTmuxColor(color);\n    } catch {\n      // File doesn't exist, try next\n    }\n  }\n\n  return null;\n}\n","import { execSync } from 'node:child_process';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV }).trim();\n}\n\nfunction execSafe(cmd: string): string | null {\n  try {\n    return exec(cmd);\n  } catch {\n    return null;\n  }\n}\n\nexport function getCurrentTmuxSession(): string {\n  const tmuxEnv = process.env['TMUX'];\n  if (!tmuxEnv) throw new Error('Not running inside tmux');\n  return exec('tmux display-message -p \"#{session_name}\"');\n}\n\nexport function createWindow(sessionName: string, windowName: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  exec(`tmux new-window -t \"${sessionName}\" -n \"${windowName}\"${cwdFlag} -P -F \"#{window_id}\"`);\n  return exec(`tmux display-message -t \"${sessionName}:${windowName}\" -p \"#{window_id}\"`);\n}\n\nexport function createPane(windowTarget: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  const paneId = exec(`tmux split-window -h -t \"${windowTarget}\"${cwdFlag} -P -F \"#{pane_id}\"`);\n  execSafe(`tmux select-layout -t \"${windowTarget}\" even-horizontal`);\n  return paneId;\n}\n\nexport function sendKeys(paneTarget: string, command: string): void {\n  exec(`tmux send-keys -t \"${paneTarget}\" ${shellQuote(command)} Enter`);\n}\n\nexport function killPane(paneTarget: string): void {\n  execSafe(`tmux kill-pane -t \"${paneTarget}\"`);\n}\n\nexport function killWindow(windowTarget: string): void {\n  execSafe(`tmux kill-window -t \"${windowTarget}\"`);\n}\n\nexport interface PaneInfo {\n  paneId: string;\n  panePid: string;\n}\n\nexport function listPanes(windowTarget: string): PaneInfo[] {\n  const output = execSafe(`tmux list-panes -t \"${windowTarget}\" -F \"#{pane_id} #{pane_pid}\"`);\n  if (!output) return [];\n  return output\n    .split('\\n')\n    .filter(Boolean)\n    .map(line => {\n      const [paneId, panePid] = line.split(' ');\n      return { paneId: paneId!, panePid: panePid! };\n    });\n}\n\nexport function setPaneTitle(paneTarget: string, title: string): void {\n  execSafe(`tmux select-pane -t \"${paneTarget}\" -T ${shellQuote(title)}`);\n}\n\nexport function setPaneStyle(paneTarget: string, color: string): void {\n  const fmt = `#[fg=${color},bold] #{pane_title} #[fg=${color}]#{pane_current_path} #[default]`;\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-border-format ${shellQuote(fmt)}`);\n  // Store color as a per-pane user variable. The window-level border styles use a\n  // format string that resolves #{@pane_color} per-pane at render time, giving each\n  // pane its own border color (pane-border-style itself is window-level / last-write-wins).\n  execSafe(`tmux set -p -t \"${paneTarget}\" @pane_color \"${color}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-active-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n}\n\nexport function sendSignal(paneTarget: string, signal: string): void {\n  const info = execSafe(`tmux list-panes -t \"${paneTarget}\" -F \"#{pane_pid}\"`);\n  if (!info) return;\n  const pid = info.split('\\n')[0]?.trim();\n  if (pid) {\n    execSafe(`kill -${signal} ${pid}`);\n  }\n}\n\nexport function selectLayout(windowTarget: string, layout: string = 'even-horizontal'): void {\n  execSafe(`tmux select-layout -t \"${windowTarget}\" ${layout}`);\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","import { readFileSync, writeFileSync, mkdirSync, readdirSync, existsSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport type { Agent, AgentReport } from '../shared/types.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getNextColor, resolveAgentTypeColor } from './colors.js';\nimport { getWindowId } from './orchestrator.js';\nimport { promptsDir, reportsDir, reportFilePath } from '../shared/paths.js';\nimport { createWorktree, countWorktreeAgents } from './worktree.js';\n\nconst agentCounters = new Map<string, number>();\n\nexport function resetAgentCounter(sessionId: string, value: number = 0): void {\n  agentCounters.set(sessionId, value);\n}\n\nexport function resetAgentCounterFromState(sessionId: string, agents: { id: string }[]): void {\n  let max = 0;\n  for (const a of agents) {\n    const match = a.id.match(/^agent-(\\d+)$/);\n    if (match) max = Math.max(max, parseInt(match[1]!, 10));\n  }\n  agentCounters.set(sessionId, max);\n}\n\nexport function clearAgentCounter(sessionId: string): void {\n  agentCounters.delete(sessionId);\n}\n\ninterface WorktreeContext {\n  offset: number;\n  total: number;\n  branchName: string;\n}\n\nfunction renderAgentSuffix(sessionId: string, instruction: string, worktreeContext?: WorktreeContext): string {\n  const templatePath = resolve(import.meta.dirname, '../templates/agent-suffix.md');\n  let template: string;\n  try {\n    template = readFileSync(templatePath, 'utf-8');\n  } catch {\n    template = `# Sisyphus Agent\\nSession: {{SESSION_ID}}\\nTask: {{INSTRUCTION}}`;\n  }\n\n  let worktreeBlock = '';\n  if (worktreeContext) {\n    worktreeBlock = [\n      '## Worktree Context',\n      `You are working in worktree ${worktreeContext.offset} of ${worktreeContext.total} concurrent worktrees on branch \\`${worktreeContext.branchName}\\`.`,\n      `If you start any services that require ports, add ${worktreeContext.offset} to the default port.`,\n    ].join('\\n');\n  }\n\n  return template\n    .replace(/\\{\\{SESSION_ID\\}\\}/g, sessionId)\n    .replace(/\\{\\{INSTRUCTION\\}\\}/g, instruction)\n    .replace(/\\{\\{WORKTREE_CONTEXT\\}\\}/g, worktreeBlock);\n}\n\nexport interface SpawnAgentOpts {\n  sessionId: string;\n  cwd: string;\n  agentType: string;\n  name: string;\n  instruction: string;\n  windowId: string;\n  worktree?: boolean;\n}\n\nexport async function spawnAgent(opts: SpawnAgentOpts): Promise<Agent> {\n  const { sessionId, cwd, agentType, name, instruction, windowId } = opts;\n  const count = (agentCounters.get(sessionId) ?? 0) + 1;\n  agentCounters.set(sessionId, count);\n  const agentId = `agent-${String(count).padStart(3, '0')}`;\n  const pluginPath = resolve(import.meta.dirname, '../templates/agent-plugin');\n  const color = resolveAgentTypeColor(agentType, pluginPath, cwd) ?? getNextColor(sessionId);\n\n  let paneCwd = cwd;\n  let worktreePath: string | undefined;\n  let branchName: string | undefined;\n  let worktreeContext: WorktreeContext | undefined;\n\n  if (opts.worktree) {\n    const wt = createWorktree(cwd, sessionId, agentId);\n    worktreePath = wt.worktreePath;\n    branchName = wt.branchName;\n    paneCwd = worktreePath;\n\n    const session = state.getSession(cwd, sessionId);\n    const portOffset = countWorktreeAgents(session.agents) + 1;\n    worktreeContext = { offset: portOffset, total: portOffset, branchName };\n  }\n\n  const paneId = tmux.createPane(windowId, paneCwd);\n  tmux.setPaneTitle(paneId, `${name} (${agentId})`);\n  tmux.setPaneStyle(paneId, color);\n\n  const suffix = renderAgentSuffix(sessionId, instruction, worktreeContext);\n  const suffixFilePath = `${promptsDir(cwd, sessionId)}/${agentId}-system.md`;\n  writeFileSync(suffixFilePath, suffix, 'utf-8');\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='${agentId}'`,\n    ...(worktreeContext ? [`export SISYPHUS_PORT_OFFSET='${worktreeContext.offset}'`] : []),\n  ].join(' && ');\n\n  const agentFlag = agentType ? ` --agent ${shellQuote(agentType)}` : '';\n  const claudeCmd = `claude --dangerously-skip-permissions --plugin-dir \"${pluginPath}\"${agentFlag} --append-system-prompt \"$(cat '${suffixFilePath}')\" ${shellQuote(instruction)}`;\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}`);\n\n  const agent: Agent = {\n    id: agentId,\n    name,\n    agentType,\n    color,\n    instruction,\n    status: 'running',\n    spawnedAt: new Date().toISOString(),\n    completedAt: null,\n    reports: [],\n    paneId,\n    ...(worktreePath ? { worktreePath, branchName, mergeStatus: 'pending' as const } : {}),\n  };\n\n  await state.addAgent(cwd, sessionId, agent);\n  return agent;\n}\n\nfunction nextReportNumber(cwd: string, sessionId: string, agentId: string): string {\n  const dir = reportsDir(cwd, sessionId);\n  try {\n    const files = readdirSync(dir).filter(f => f.startsWith(`${agentId}-`) && !f.endsWith('-final.md'));\n    return String(files.length + 1).padStart(3, '0');\n  } catch {\n    return '001';\n  }\n}\n\nexport async function handleAgentReport(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  content: string,\n): Promise<void> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const num = nextReportNumber(cwd, sessionId, agentId);\n  const filePath = reportFilePath(cwd, sessionId, agentId, num);\n  writeFileSync(filePath, content, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'update',\n    filePath,\n    summary: content.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n}\n\nexport async function handleAgentSubmit(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  report: string,\n): Promise<boolean> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const filePath = reportFilePath(cwd, sessionId, agentId, 'final');\n  writeFileSync(filePath, report, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'final',\n    filePath,\n    summary: report.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'completed',\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  const agentArr = session.agents;\n  const agent = agentArr.slice().reverse().find(a => a.id === agentId);\n  if (agent) {\n    tmux.killPane(agent.paneId);\n  }\n\n  const windowId = getWindowId(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  return allAgentsDone(session);\n}\n\nexport async function handleAgentKilled(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  reason: string,\n): Promise<boolean> {\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'killed',\n    killedReason: reason,\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  return allAgentsDone(session);\n}\n\n// Note: this checks ALL running agents in the session, not just orchestrator-spawned ones.\n// Agents can also call `sisyphus spawn`, and those child agents are included here —\n// the orchestrator won't respawn until every agent (including agent-spawned ones) finishes.\nfunction allAgentsDone(session: import('../shared/types.js').Session): boolean {\n  const running = session.agents.filter(a => a.status === 'running');\n  return running.length === 0 && session.agents.length > 0;\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","import { execSync } from 'node:child_process';\nimport { existsSync, mkdirSync, readFileSync, readdirSync, rmSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport type { Agent } from '../shared/types.js';\nimport type { WorktreeConfig } from '../shared/config.js';\nimport { worktreeConfigPath, worktreeBaseDir } from '../shared/paths.js';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string, cwd?: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV, cwd }).trim();\n}\n\nfunction execSafe(cmd: string, cwd?: string): string | null {\n  try {\n    return exec(cmd, cwd);\n  } catch {\n    return null;\n  }\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nexport interface MergeResult {\n  agentId: string;\n  name: string;\n  status: 'merged' | 'conflict' | 'no-changes';\n  conflictDetails?: string;\n}\n\nexport function loadWorktreeConfig(cwd: string): WorktreeConfig | null {\n  try {\n    const content = readFileSync(worktreeConfigPath(cwd), 'utf-8');\n    return JSON.parse(content) as WorktreeConfig;\n  } catch {\n    return null;\n  }\n}\n\nexport function createWorktree(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n): { worktreePath: string; branchName: string } {\n  const branchName = `sisyphus/${sessionId.slice(0, 8)}/${agentId}`;\n  const worktreePath = join(worktreeBaseDir(cwd), agentId);\n\n  mkdirSync(dirname(worktreePath), { recursive: true });\n\n  exec(`git -C ${shellQuote(cwd)} branch ${shellQuote(branchName)} HEAD`);\n  exec(`git -C ${shellQuote(cwd)} worktree add ${shellQuote(worktreePath)} ${shellQuote(branchName)}`);\n\n  // Always symlink .sisyphus and .claude from cwd into worktree\n  const symlinks = ['.sisyphus', '.claude'];\n  for (const entry of symlinks) {\n    const src = join(cwd, entry);\n    if (existsSync(src)) {\n      execSafe(`ln -s ${shellQuote(src)} ${shellQuote(join(worktreePath, entry))}`);\n    }\n  }\n\n  // Load worktree config and bootstrap if present\n  const config = loadWorktreeConfig(cwd);\n  if (config) {\n    bootstrapWorktree(cwd, worktreePath, config);\n  }\n\n  return { worktreePath, branchName };\n}\n\nexport function bootstrapWorktree(cwd: string, worktreePath: string, config: WorktreeConfig): void {\n  // Process copy entries\n  if (config.copy) {\n    for (const entry of config.copy) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`cp -r ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process clone entries (APFS CoW on macOS, fallback to cp -r)\n  if (config.clone) {\n    for (const entry of config.clone) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      const src = shellQuote(join(cwd, entry));\n      const dstQ = shellQuote(dest);\n      if (execSafe(`cp -Rc ${src} ${dstQ}`) === null) {\n        execSafe(`cp -r ${src} ${dstQ}`);\n      }\n    }\n  }\n\n  // Process symlink entries\n  if (config.symlink) {\n    for (const entry of config.symlink) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`ln -s ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process init command\n  if (config.init) {\n    try {\n      exec(config.init, worktreePath);\n    } catch (err) {\n      console.error(`[sisyphus] worktree init command failed: ${err instanceof Error ? err.message : err}`);\n    }\n  }\n}\n\n/**\n * Resolve the branch checked out in a worktree by parsing `git worktree list --porcelain`.\n * Returns null if the worktree isn't found or has a detached HEAD.\n */\nfunction resolveWorktreeBranch(cwd: string, worktreePath: string): string | null {\n  const output = execSafe(`git -C ${shellQuote(cwd)} worktree list --porcelain`);\n  if (!output) return null;\n\n  const lines = output.split('\\n');\n  for (let i = 0; i < lines.length; i++) {\n    if (lines[i] === `worktree ${worktreePath}`) {\n      for (let j = i + 1; j < lines.length; j++) {\n        const line = lines[j]!;\n        if (line === '') break; // end of this worktree block\n        if (line.startsWith('branch refs/heads/')) {\n          return line.slice('branch refs/heads/'.length);\n        }\n      }\n      break;\n    }\n  }\n  return null;\n}\n\nexport function mergeWorktrees(cwd: string, agents: Agent[]): MergeResult[] {\n  const pending = agents.filter(\n    a => a.worktreePath && a.mergeStatus === 'pending',\n  );\n\n  const results: MergeResult[] = [];\n\n  for (const agent of pending) {\n    const branch = resolveWorktreeBranch(cwd, agent.worktreePath!);\n\n    if (!branch) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      // Best-effort cleanup — branch name unknown, just remove worktree dir\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)} --force`);\n      continue;\n    }\n\n    // Check if branch has commits ahead of merge base\n    const aheadLog = execSafe(`git -C ${shellQuote(cwd)} log HEAD..${shellQuote(branch)} --oneline`);\n    if (!aheadLog) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      cleanupWorktree(cwd, agent.worktreePath!, branch);\n      continue;\n    }\n\n    // Attempt merge — capture stderr on failure for conflict details\n    const mergeMsg = `sisyphus: merge ${agent.id} (${agent.name})`;\n    const mergeCmd = `git -C ${shellQuote(cwd)} merge --no-ff ${shellQuote(branch)} -m ${shellQuote(mergeMsg)}`;\n\n    try {\n      exec(mergeCmd);\n      // Merge succeeded — clean up worktree and branch\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)}`);\n      execSafe(`git -C ${shellQuote(cwd)} branch -d ${shellQuote(branch)}`);\n      results.push({ agentId: agent.id, name: agent.name, status: 'merged' });\n    } catch (err: unknown) {\n      // Merge failed — abort and leave worktree intact for manual resolution\n      execSafe(`git -C ${shellQuote(cwd)} merge --abort`);\n      const stderr = (err as { stderr?: Buffer | string })?.stderr;\n      const conflictDetails = stderr\n        ? (typeof stderr === 'string' ? stderr : stderr.toString('utf-8')).trim()\n        : (err instanceof Error ? err.message : String(err));\n      results.push({ agentId: agent.id, name: agent.name, status: 'conflict', conflictDetails });\n    }\n  }\n\n  return results;\n}\n\nexport function cleanupWorktree(cwd: string, worktreePath: string, branchName: string): void {\n  execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(worktreePath)} --force`);\n  execSafe(`git -C ${shellQuote(cwd)} branch -D ${shellQuote(branchName)}`);\n\n  // Remove the worktree base dir if empty\n  const baseDir = dirname(worktreePath);\n  try {\n    const entries = readdirSync(baseDir);\n    if (entries.length === 0) {\n      rmSync(baseDir, { recursive: true });\n    }\n  } catch {\n    // Ignore — directory may already be gone\n  }\n}\n\nexport function countWorktreeAgents(agents: Agent[]): number {\n  return agents.filter(a => a.worktreePath && a.status === 'running').length;\n}\n","import * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getOrchestratorPaneId, cleanupSessionMaps } from './orchestrator.js';\nimport { handleAgentKilled } from './agent.js';\n\ntype RespawnCallback = (sessionId: string, cwd: string, windowId: string) => void;\n\nlet monitorInterval: ReturnType<typeof setInterval> | null = null;\nlet onAllAgentsDone: RespawnCallback | null = null;\n\nexport function setRespawnCallback(cb: RespawnCallback): void {\n  onAllAgentsDone = cb;\n}\n\nexport function startMonitor(pollIntervalMs: number = 1000): void {\n  if (monitorInterval) return;\n  monitorInterval = setInterval(() => {\n    pollAllSessions().catch(err => {\n      console.error('[sisyphus] Pane monitor error:', err);\n    });\n  }, pollIntervalMs);\n}\n\nexport function stopMonitor(): void {\n  if (monitorInterval) {\n    clearInterval(monitorInterval);\n    monitorInterval = null;\n  }\n}\n\nconst trackedSessions = new Map<string, { id: string; cwd: string; tmuxSession: string; windowId: string | null }>();\n\nexport function trackSession(sessionId: string, cwd: string, tmuxSession: string): void {\n  // windowId is registered separately via updateTrackedWindow after spawnOrchestrator sets it\n  const existing = trackedSessions.get(sessionId);\n  trackedSessions.set(sessionId, { id: sessionId, cwd, tmuxSession, windowId: existing ? existing.windowId : null });\n}\n\nexport function updateTrackedWindow(sessionId: string, windowId: string): void {\n  const entry = trackedSessions.get(sessionId);\n  if (!entry) throw new Error(`Cannot update window for untracked session: ${sessionId}`);\n  entry.windowId = windowId;\n}\n\nexport function untrackSession(sessionId: string): void {\n  trackedSessions.delete(sessionId);\n}\n\nasync function pollAllSessions(): Promise<void> {\n  for (const { id: sessionId, cwd, windowId } of trackedSessions.values()) {\n    if (windowId) {\n      await pollSession(sessionId, cwd, windowId);\n    }\n  }\n}\n\nasync function pollSession(sessionId: string, cwd: string, windowId: string): Promise<void> {\n  let session;\n  try {\n    session = state.getSession(cwd, sessionId);\n  } catch (err) {\n    console.error(`[sisyphus] Failed to read state for session ${sessionId}:`, err);\n    return;\n  }\n\n  if (session.status === 'completed') {\n    const orchPaneId = getOrchestratorPaneId(sessionId);\n    if (orchPaneId) {\n      const livePanes = tmux.listPanes(windowId);\n      const livePaneIds = new Set(livePanes.map(p => p.paneId));\n      if (!livePaneIds.has(orchPaneId)) {\n        cleanupSessionMaps(sessionId);\n        untrackSession(sessionId);\n        console.log(`[sisyphus] Session ${sessionId} cleaned up: orchestrator pane closed by user`);\n      }\n    } else {\n      // No orchestrator pane tracked — clean up immediately\n      cleanupSessionMaps(sessionId);\n      untrackSession(sessionId);\n    }\n    return;\n  }\n\n  if (session.status !== 'active') return;\n\n  const livePanes = tmux.listPanes(windowId);\n  if (livePanes.length === 0) return;\n\n  const livePaneIds = new Set(livePanes.map(p => p.paneId));\n\n  let paneRemoved = false;\n  for (const agent of session.agents) {\n    if (agent.status !== 'running') continue;\n    if (!livePaneIds.has(agent.paneId)) {\n      paneRemoved = true;\n      const allDone = await handleAgentKilled(cwd, sessionId, agent.id, 'pane closed by user');\n      if (allDone && onAllAgentsDone) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  }\n\n  if (paneRemoved) tmux.selectLayout(windowId);\n\n  // Check orchestrator pane\n  const orchPaneId = getOrchestratorPaneId(sessionId);\n  if (orchPaneId && !livePaneIds.has(orchPaneId)) {\n    // Orchestrator pane disappeared without a yield command\n    const runningAgents = session.agents.filter(a => a.status === 'running');\n    if (runningAgents.length === 0) {\n      // No agents running and orchestrator gone — pause\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane disappeared`);\n    }\n  }\n\n  // Re-read state since handleAgentKilled may have mutated it\n  session = state.getSession(cwd, sessionId);\n  if (\n    session.status === 'active' &&\n    session.agents.length > 0 &&\n    session.agents.every(a => a.status !== 'running') &&\n    (!orchPaneId || !livePaneIds.has(orchPaneId)) &&\n    onAllAgentsDone\n  ) {\n    console.log(`[sisyphus] Detected stuck session ${sessionId}: all agents done, no orchestrator — triggering respawn`);\n    onAllAgentsDone(sessionId, cwd, windowId);\n  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package/dist/templates/CLAUDE.md

@@ -0,0 +1,50 @@
+# templates/
+
+System prompt templates for orchestrator and agent initialization.
+
+## Core Templates
+
+- **orchestrator.md** — Orchestrator system prompt. Defines orchestrator role (coordinator, not implementer), cycle workflow, phase-based thinking (explore → spec → plan → implement → review → test), context persistence via plan.md/logs.md, work right-sizing (~30 tool calls per item), and validation patterns. Rendered with `<state>` block injected containing agent reports, cycle history, plan/logs references.
+- **agent-suffix.md** — Agent system prompt suffix. Contains `{{SESSION_ID}}` and `{{INSTRUCTION}}` placeholders. Rendered once per agent spawn.
+- **banner.txt** — ASCII banner (cosmetic, displayed on daemon startup or CLI output).
+
+## Configuration Files
+
+- **orchestrator-settings.json** — Default orchestrator configuration (model, behavior flags, rendering options). Overridden by project `.sisyphus/orchestrator-settings.json`.
+- **agent-settings.json** — Default agent configuration (model, behavior flags, plugin overrides). Overridden by project `.sisyphus/agent-settings.json`.
+
+## Subdirectories
+
+- **agent-plugin/** — Agent system prompts for crouton-kit plugin agent types (e.g., `debug`, `implement`, `plan`). Each file named `{agent-type}.md` provides specialized role & strategy.
+- **orchestrator-plugin/** — Orchestrator overrides for crouton-kit plugin workflows.
+
+## Rendering Rules
+
+**Orchestrator prompt**:
+1. Read `orchestrator.md` (or project override `.sisyphus/orchestrator.md`)
+2. Load settings from `orchestrator-settings.json` (or project override)
+3. Append `<state>` block with: agent reports, cycle count, history, plan.md and logs.md references
+4. Pass to Claude via `--append-system-prompt` flag
+5. User prompt: concise cycle instruction ("review reports, delegate next phase")
+
+**Agent prompt**:
+1. Read `agent-suffix.md`
+2. Load settings from `agent-settings.json` (or project override)
+3. Replace `{{SESSION_ID}}` with session UUID
+4. Replace `{{INSTRUCTION}}` with task instruction (e.g., "implement login feature")
+5. Pass via `--append-system-prompt` flag
+6. User prompt: instruction again (for clarity)
+
+**Plugin prompts** (`agent-plugin/*.md`):
+- Used only when agent spawned with `--agent-type sisyphus:{type}`
+- Replaces default agent-suffix.md rendering
+- Same placeholder substitution rules apply
+
+## Important Boundaries
+
+- Do **not** hardcode session IDs or agent names—use placeholders
+- Do **not** include raw JSON in prompts—use human-readable `<state>` formatting
+- Do **not** reference external files (only relative paths in `.sisyphus/`)
+- Do **keep prompts concise**—Claude reads full state separately
+- Settings files must be valid JSON; use project overrides to customize behavior per-workspace
+- Orchestrator template should emphasize phase-based methodology and context preservation, not encourage autonomous rushing

package/dist/templates/agent-plugin/.claude/agents/debug.md

@@ -0,0 +1,39 @@
+---
+name: debug
+description: Systematic bug diagnosis. Investigate only — no code changes.
+model: opus
+color: red
+---
+
+You are a systematic debugger. Follow this 3-phase methodology:
+
+## Phase 1: Reconnaissance
+
+Read the key files yourself. You need firsthand context.
+
+- Entry points and failure points
+- Data flow through the bug area
+- `git log`/`git blame` near the failure (recent changes are high-signal)
+- Error messages, stack traces, or symptoms
+
+## Phase 2: Investigate
+
+Based on recon, assess difficulty and scale your response:
+
+**Simple** (clear error, obvious area): Investigate solo. Use Explore subagents for code tracing if the area is large.
+
+**Medium** (unclear cause, multiple origins, crosses 2-3 modules): Spawn 2-3 parallel senior-advisor subagents with concrete tasks:
+- Data Flow Tracer: trace values from entry to failure
+- Assumption Auditor: list and verify assumptions about types/nullability/ordering/timing
+- Change Investigator: git log/blame for recent regressions
+
+**Hard** (intermittent, race conditions, crosses many modules): Create an agent team with 3-5 teammates, each with precise scope. Teammates must actively challenge each other's theories.
+
+## Phase 3: Synthesize & Report
+
+1. **Root Cause**: Exact failing line(s) and why
+2. **Evidence**: Code snippets, data flow, git blame findings
+3. **Confidence**: High / Medium / Low
+4. **Recommended Fix**: Concrete approach
+
+No code changes — investigate only (reproduction tests are the exception).