sisyphi 0.1.15 → 0.1.17

package/dist/{chunk-N2BPQOO2.js → chunk-LTAW6OWS.js}

@@ -18,6 +18,9 @@ function daemonLogPath() {
 function daemonPidPath() {
   return join(globalDir(), "daemon.pid");
 }
+function daemonUpdatingPath() {
+  return join(globalDir(), "updating");
+}
 function projectDir(cwd) {
   return join(cwd, ".sisyphus");
 }
@@ -67,6 +70,7 @@ export {
   globalConfigPath,
   daemonLogPath,
   daemonPidPath,
+  daemonUpdatingPath,
   projectConfigPath,
   projectOrchestratorPromptPath,
   sessionsDir,
@@ -81,4 +85,4 @@ export {
   worktreeConfigPath,
   worktreeBaseDir
 };
-//# sourceMappingURL=chunk-N2BPQOO2.js.map
+//# sourceMappingURL=chunk-LTAW6OWS.js.map

package/dist/chunk-LTAW6OWS.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/shared/paths.ts"],"sourcesContent":["import { homedir } from 'node:os';\nimport { basename, join } from 'node:path';\n\nexport function globalDir(): string {\n  return join(homedir(), '.sisyphus');\n}\n\nexport function socketPath(): string {\n  return join(globalDir(), 'daemon.sock');\n}\n\nexport function globalConfigPath(): string {\n  return join(globalDir(), 'config.json');\n}\n\nexport function daemonLogPath(): string {\n  return join(globalDir(), 'daemon.log');\n}\n\nexport function daemonPidPath(): string {\n  return join(globalDir(), 'daemon.pid');\n}\n\nexport function daemonUpdatingPath(): string {\n  return join(globalDir(), 'updating');\n}\n\nexport function projectDir(cwd: string): string {\n  return join(cwd, '.sisyphus');\n}\n\nexport function projectConfigPath(cwd: string): string {\n  return join(projectDir(cwd), 'config.json');\n}\n\nexport function projectOrchestratorPromptPath(cwd: string): string {\n  return join(projectDir(cwd), 'orchestrator.md');\n}\n\nexport function sessionsDir(cwd: string): string {\n  return join(projectDir(cwd), 'sessions');\n}\n\nexport function sessionDir(cwd: string, sessionId: string): string {\n  return join(sessionsDir(cwd), sessionId);\n}\n\nexport function statePath(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'state.json');\n}\n\nexport function reportsDir(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'reports');\n}\n\nexport function reportFilePath(cwd: string, sessionId: string, agentId: string, suffix: string): string {\n  return join(reportsDir(cwd, sessionId), `${agentId}-${suffix}.md`);\n}\n\nexport function promptsDir(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'prompts');\n}\n\nexport function contextDir(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'context');\n}\n\nexport function planPath(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'plan.md');\n}\n\nexport function logsPath(cwd: string, sessionId: string): string {\n  return join(sessionDir(cwd, sessionId), 'logs.md');\n}\n\nexport function worktreeConfigPath(cwd: string): string {\n  return join(projectDir(cwd), 'worktree.json');\n}\n\nexport function worktreeBaseDir(cwd: string): string {\n  return join(cwd, '..', `${basename(cwd)}-sisyphus-wt`);\n}\n"],"mappings":";;;AAAA,SAAS,eAAe;AACxB,SAAS,UAAU,YAAY;AAExB,SAAS,YAAoB;AAClC,SAAO,KAAK,QAAQ,GAAG,WAAW;AACpC;AAEO,SAAS,aAAqB;AACnC,SAAO,KAAK,UAAU,GAAG,aAAa;AACxC;AAEO,SAAS,mBAA2B;AACzC,SAAO,KAAK,UAAU,GAAG,aAAa;AACxC;AAEO,SAAS,gBAAwB;AACtC,SAAO,KAAK,UAAU,GAAG,YAAY;AACvC;AAEO,SAAS,gBAAwB;AACtC,SAAO,KAAK,UAAU,GAAG,YAAY;AACvC;AAEO,SAAS,qBAA6B;AAC3C,SAAO,KAAK,UAAU,GAAG,UAAU;AACrC;AAEO,SAAS,WAAW,KAAqB;AAC9C,SAAO,KAAK,KAAK,WAAW;AAC9B;AAEO,SAAS,kBAAkB,KAAqB;AACrD,SAAO,KAAK,WAAW,GAAG,GAAG,aAAa;AAC5C;AAEO,SAAS,8BAA8B,KAAqB;AACjE,SAAO,KAAK,WAAW,GAAG,GAAG,iBAAiB;AAChD;AAEO,SAAS,YAAY,KAAqB;AAC/C,SAAO,KAAK,WAAW,GAAG,GAAG,UAAU;AACzC;AAEO,SAAS,WAAW,KAAa,WAA2B;AACjE,SAAO,KAAK,YAAY,GAAG,GAAG,SAAS;AACzC;AAEO,SAAS,UAAU,KAAa,WAA2B;AAChE,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,YAAY;AACtD;AAEO,SAAS,WAAW,KAAa,WAA2B;AACjE,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,SAAS;AACnD;AAEO,SAAS,eAAe,KAAa,WAAmB,SAAiB,QAAwB;AACtG,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,GAAG,OAAO,IAAI,MAAM,KAAK;AACnE;AAEO,SAAS,WAAW,KAAa,WAA2B;AACjE,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,SAAS;AACnD;AAEO,SAAS,WAAW,KAAa,WAA2B;AACjE,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,SAAS;AACnD;AAEO,SAAS,SAAS,KAAa,WAA2B;AAC/D,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,SAAS;AACnD;AAEO,SAAS,SAAS,KAAa,WAA2B;AAC/D,SAAO,KAAK,WAAW,KAAK,SAAS,GAAG,SAAS;AACnD;AAEO,SAAS,mBAAmB,KAAqB;AACtD,SAAO,KAAK,WAAW,GAAG,GAAG,eAAe;AAC9C;AAEO,SAAS,gBAAgB,KAAqB;AACnD,SAAO,KAAK,KAAK,MAAM,GAAG,SAAS,GAAG,CAAC,cAAc;AACvD;","names":[]}

package/dist/cli.js

@@ -1,9 +1,10 @@
 #!/usr/bin/env node
 import {
   daemonLogPath,
+  daemonUpdatingPath,
   globalDir,
   socketPath
-} from "./chunk-N2BPQOO2.js";
+} from "./chunk-LTAW6OWS.js";
 
 // src/cli/index.ts
 import { Command } from "commander";
@@ -13,7 +14,7 @@ import { connect as connect2 } from "net";
 
 // src/cli/install.ts
 import { execSync } from "child_process";
-import { existsSync, mkdirSync, rmSync, unlinkSync, writeFileSync } from "fs";
+import { existsSync, mkdirSync, readFileSync, rmSync, unlinkSync, writeFileSync } from "fs";
 import { connect } from "net";
 import { homedir } from "os";
 import { dirname, join, resolve } from "path";
@@ -113,7 +114,21 @@ function sleep(ms) {
 }
 async function waitForDaemon(maxWaitMs = 6e3) {
   const start = Date.now();
+  let updatingLogged = false;
   while (Date.now() - start < maxWaitMs) {
+    const updatingPath = daemonUpdatingPath();
+    if (existsSync(updatingPath)) {
+      if (!updatingLogged) {
+        try {
+          const version = readFileSync(updatingPath, "utf-8").trim();
+          console.log(`Updating sisyphus to ${version}...`);
+        } catch {
+          console.log("Updating sisyphus...");
+        }
+        updatingLogged = true;
+      }
+      maxWaitMs = Math.max(maxWaitMs, 3e4);
+    }
     if (existsSync(socketPath())) {
       try {
         await testConnection();

package/dist/cli.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/cli/index.ts","../src/cli/client.ts","../src/cli/install.ts","../src/cli/tmux.ts","../src/cli/commands/start.ts","../src/cli/commands/spawn.ts","../src/cli/commands/submit.ts","../src/cli/stdin.ts","../src/cli/commands/yield.ts","../src/cli/commands/complete.ts","../src/cli/commands/status.ts","../src/cli/commands/list.ts","../src/cli/commands/report.ts","../src/cli/commands/resume.ts","../src/cli/commands/kill.ts","../src/cli/commands/uninstall.ts","../src/cli/commands/notify.ts"],"sourcesContent":["import { Command } from 'commander';\nimport { registerStart } from './commands/start.js';\nimport { registerSpawn } from './commands/spawn.js';\nimport { registerSubmit } from './commands/submit.js';\nimport { registerYield } from './commands/yield.js';\nimport { registerComplete } from './commands/complete.js';\nimport { registerStatus } from './commands/status.js';\nimport { registerList } from './commands/list.js';\nimport { registerReport } from './commands/report.js';\nimport { registerResume } from './commands/resume.js';\nimport { registerKill } from './commands/kill.js';\nimport { registerUninstall } from './commands/uninstall.js';\nimport { registerNotify } from './commands/notify.js';\n\nconst program = new Command();\n\nprogram\n  .name('sisyphus')\n  .description('tmux-integrated orchestration daemon for Claude Code')\n  .version('0.1.0');\n\nregisterStart(program);\nregisterSpawn(program);\nregisterSubmit(program);\nregisterReport(program);\nregisterYield(program);\nregisterComplete(program);\nregisterStatus(program);\nregisterList(program);\nregisterResume(program);\nregisterKill(program);\nregisterUninstall(program);\nregisterNotify(program);\n\nprogram.parseAsync(process.argv).catch((err: Error) => {\n  console.error(err.message);\n  process.exit(1);\n});\n","import { connect } from 'node:net';\nimport { socketPath } from '../shared/paths.js';\nimport type { Request, Response } from '../shared/protocol.js';\nimport { ensureDaemonInstalled, waitForDaemon } from './install.js';\n\nexport function rawSend(request: Request): Promise<Response> {\n  const sock = socketPath();\n\n  return new Promise<Response>((resolve, reject) => {\n    const socket = connect(sock);\n    let data = '';\n\n    const timeout = setTimeout(() => {\n      socket.destroy();\n      reject(new Error('Request timed out after 10s'));\n    }, 10_000);\n\n    socket.on('connect', () => {\n      socket.write(JSON.stringify(request) + '\\n');\n    });\n\n    socket.on('data', (chunk) => {\n      data += chunk.toString();\n      const newlineIdx = data.indexOf('\\n');\n      if (newlineIdx !== -1) {\n        clearTimeout(timeout);\n        const line = data.slice(0, newlineIdx);\n        socket.destroy();\n        try {\n          resolve(JSON.parse(line) as Response);\n        } catch {\n          reject(new Error(`Invalid JSON response from daemon: ${line}`));\n        }\n      }\n    });\n\n    socket.on('error', (err) => {\n      clearTimeout(timeout);\n      reject(err);\n    });\n  });\n}\n\nexport async function sendRequest(request: Request): Promise<Response> {\n  const sleep = (ms: number) => new Promise<void>((resolve) => setTimeout(resolve, ms));\n  const MAX_ATTEMPTS = 5;\n  const RETRY_DELAY_MS = 2000;\n  let installedDaemon = false;\n  let lastErr: unknown;\n\n  for (let attempt = 1; attempt <= MAX_ATTEMPTS; attempt++) {\n    try {\n      return await rawSend(request);\n    } catch (err) {\n      lastErr = err;\n      const code = (err as NodeJS.ErrnoException).code;\n      if (code !== 'ENOENT' && code !== 'ECONNREFUSED') {\n        throw err;\n      }\n\n      if (attempt === MAX_ATTEMPTS) break;\n\n      if (process.platform === 'darwin' && !installedDaemon) {\n        installedDaemon = true;\n        await ensureDaemonInstalled();\n        await waitForDaemon(5000);\n      } else {\n        process.stderr.write(`Daemon not ready, retrying (${attempt}/${MAX_ATTEMPTS - 1})...\\n`);\n        await sleep(RETRY_DELAY_MS);\n      }\n    }\n  }\n\n  if (process.platform !== 'darwin') {\n    throw new Error(\n      `Sisyphus daemon is not running.\\n` +\n      `  Start it manually: sisyphusd &\\n` +\n      `  Or check logs at: ~/.sisyphus/daemon.log`\n    );\n  }\n  throw lastErr;\n}\n","import { execSync } from 'node:child_process';\nimport { existsSync, mkdirSync, rmSync, unlinkSync, writeFileSync } from 'node:fs';\nimport { connect } from 'node:net';\nimport { homedir } from 'node:os';\nimport { dirname, join, resolve } from 'node:path';\nimport { fileURLToPath } from 'node:url';\nimport { daemonLogPath, globalDir, socketPath } from '../shared/paths.js';\n\nconst PLIST_LABEL = 'com.sisyphus.daemon';\nconst PLIST_FILENAME = `${PLIST_LABEL}.plist`;\n\nfunction launchAgentDir(): string {\n  return join(homedir(), 'Library', 'LaunchAgents');\n}\n\nfunction plistPath(): string {\n  return join(launchAgentDir(), PLIST_FILENAME);\n}\n\nfunction daemonBinPath(): string {\n  // In bundled output, cli.js and daemon.js are siblings in dist/\n  const installDir = dirname(fileURLToPath(import.meta.url));\n  return resolve(installDir, 'daemon.js');\n}\n\nfunction generatePlist(nodePath: string, daemonPath: string, logPath: string): string {\n  return `<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<!DOCTYPE plist PUBLIC \"-//Apple//DTD PLIST 1.0//EN\" \"http://www.apple.com/DTDs/PropertyList-1.0.dtd\">\n<plist version=\"1.0\">\n<dict>\n  <key>Label</key>\n  <string>${PLIST_LABEL}</string>\n  <key>ProgramArguments</key>\n  <array>\n    <string>${nodePath}</string>\n    <string>${daemonPath}</string>\n  </array>\n  <key>RunAtLoad</key>\n  <true/>\n  <key>KeepAlive</key>\n  <true/>\n  <key>StandardOutPath</key>\n  <string>${logPath}</string>\n  <key>StandardErrorPath</key>\n  <string>${logPath}</string>\n</dict>\n</plist>\n`;\n}\n\nexport function isInstalled(): boolean {\n  return existsSync(plistPath());\n}\n\nexport async function ensureDaemonInstalled(): Promise<void> {\n  if (process.platform !== 'darwin') return;\n\n  if (!isInstalled()) {\n    const nodePath = process.execPath;\n    const daemonPath = daemonBinPath();\n    const logPath = daemonLogPath();\n\n    mkdirSync(globalDir(), { recursive: true });\n    mkdirSync(launchAgentDir(), { recursive: true });\n\n    const plist = generatePlist(nodePath, daemonPath, logPath);\n    writeFileSync(plistPath(), plist, 'utf8');\n\n    execSync(`launchctl load -w ${plistPath()}`);\n  }\n\n  await waitForDaemon();\n}\n\nexport async function uninstallDaemon(purge: boolean): Promise<void> {\n  if (process.platform !== 'darwin') {\n    console.log('Auto-install is only supported on macOS.');\n    return;\n  }\n\n  const plist = plistPath();\n  if (existsSync(plist)) {\n    try {\n      execSync(`launchctl unload -w ${plist}`, { stdio: 'pipe' });\n    } catch {\n      // already unloaded or not registered — ignore\n    }\n    unlinkSync(plist);\n    console.log('Daemon unloaded and plist removed.');\n  } else {\n    console.log('Daemon is not installed (plist not found).');\n  }\n\n  if (purge) {\n    const dir = globalDir();\n    if (existsSync(dir)) {\n      rmSync(dir, { recursive: true, force: true });\n      console.log(`Removed ${dir}`);\n    }\n  }\n}\n\nfunction testConnection(): Promise<void> {\n  return new Promise((resolve, reject) => {\n    const sock = connect(socketPath());\n    sock.on('connect', () => { sock.destroy(); resolve(); });\n    sock.on('error', (err) => { sock.destroy(); reject(err); });\n  });\n}\n\nfunction sleep(ms: number): Promise<void> {\n  return new Promise((resolve) => setTimeout(resolve, ms));\n}\n\nexport async function waitForDaemon(maxWaitMs = 6000): Promise<void> {\n  const start = Date.now();\n  while (Date.now() - start < maxWaitMs) {\n    if (existsSync(socketPath())) {\n      try {\n        await testConnection();\n        return;\n      } catch {\n        // not ready yet\n      }\n    }\n    await sleep(300);\n  }\n  throw new Error(`Daemon did not start within ${maxWaitMs}ms. Check ${daemonLogPath()}`);\n}\n","import { execSync } from 'node:child_process';\n\nexport function assertTmux(): void {\n  if (!process.env.TMUX) {\n    throw new Error('Not running inside a tmux pane. Sisyphus requires tmux.');\n  }\n}\n\nexport function getTmuxSession(): string {\n  assertTmux();\n  return execSync('tmux display-message -p \"#{session_name}\"', { encoding: 'utf8' }).trim();\n}\n\nexport function getTmuxWindow(): string {\n  assertTmux();\n  return execSync('tmux display-message -p \"#{window_id}\"', { encoding: 'utf8' }).trim();\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { getTmuxSession, getTmuxWindow } from '../tmux.js';\n\nexport function registerStart(program: Command): void {\n  program\n    .command('start')\n    .description('Start a new sisyphus session')\n    .argument('<task>', 'Task description for the orchestrator')\n    .action(async (task: string) => {\n      const tmuxSession = getTmuxSession();\n      const tmuxWindow = getTmuxWindow();\n      const request: Request = { type: 'start', task, cwd: process.cwd(), tmuxSession, tmuxWindow };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const sessionId = response.data?.sessionId as string;\n        console.log(`Session started: ${sessionId}`);\n        if (response.data?.tmuxWindow) {\n          console.log(`Orchestrator spawned in tmux window: ${response.data.tmuxWindow}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerSpawn(program: Command): void {\n  program\n    .command('spawn')\n    .description('Spawn a new agent (orchestrator only)')\n    .option('--agent-type <type>', 'Agent role label (default: worker)', 'worker')\n    .requiredOption('--name <name>', 'Agent name')\n    .requiredOption('--instruction <instruction>', 'Task instruction for the agent')\n    .option('--worktree', 'Spawn agent in an isolated git worktree')\n    .action(async (opts: { agentType: string; name: string; instruction: string; worktree?: boolean }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const request: Request = {\n        type: 'spawn',\n        sessionId,\n        agentType: opts.agentType,\n        name: opts.name,\n        instruction: opts.instruction,\n        ...(opts.worktree ? { worktree: true } : {}),\n      };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const agentId = response.data?.agentId as string;\n        console.log(`Agent spawned: ${agentId}`);\n        console.log(\"Run `sisyphus yield` when done spawning agents.\");\n      } else {\n        console.error(`Error: ${response.error}`);\n        if (response.error?.includes(\"Unknown session\")) console.error(\"Hint: run `sisyphus list` to see active sessions.\");\n        process.exit(1);\n      }\n    });\n}\n","import { execSync } from 'node:child_process';\nimport type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nfunction isInWorktree(): boolean {\n  try {\n    const gitDir = execSync('git rev-parse --git-dir', { encoding: 'utf-8' }).trim();\n    const commonDir = execSync('git rev-parse --git-common-dir', { encoding: 'utf-8' }).trim();\n    return gitDir !== commonDir;\n  } catch {\n    return false;\n  }\n}\n\nfunction getUncommittedChanges(): string | null {\n  try {\n    const status = execSync('git status --porcelain', { encoding: 'utf-8' }).trim();\n    return status || null;\n  } catch {\n    return null;\n  }\n}\n\nexport function registerSubmit(program: Command): void {\n  program\n    .command('submit')\n    .description('Submit work report and exit (agent only)')\n    .option('--report <report>', 'Work report (or pipe via stdin)')\n    .action(async (opts: { report?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      const agentId = process.env.SISYPHUS_AGENT_ID;\n      if (!sessionId || !agentId) {\n        console.error('Error: SISYPHUS_SESSION_ID and SISYPHUS_AGENT_ID environment variables must be set');\n        process.exit(1);\n      }\n\n      // Block submit if worktree has uncommitted changes — they'd be lost on merge\n      if (isInWorktree()) {\n        const changes = getUncommittedChanges();\n        if (changes) {\n          console.error('Error: uncommitted changes in worktree. Your branch is merged automatically after submit — uncommitted work will be lost.');\n          console.error('\\nCommit first:\\n  git add -A && git commit -m \"description of changes\"\\n');\n          console.error('Or discard:\\n  git checkout -- .\\n');\n          console.error('Uncommitted changes:');\n          console.error(changes);\n          process.exit(1);\n        }\n      }\n\n      const report = opts.report ?? await readStdin();\n      if (!report) {\n        console.error('Error: provide --report or pipe content via stdin');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'submit', sessionId, agentId, report };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log('Report submitted successfully');\n        console.log('Your pane will close. The orchestrator resumes when all agents finish.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","export function readStdin(): Promise<string | null> {\n  if (process.stdin.isTTY) return Promise.resolve(null);\n\n  return new Promise((resolve, reject) => {\n    const chunks: Buffer[] = [];\n    process.stdin.on('data', (chunk: Buffer) => chunks.push(chunk));\n    process.stdin.on('end', () => {\n      const text = Buffer.concat(chunks).toString('utf-8').trim();\n      resolve(text || null);\n    });\n    process.stdin.on('error', reject);\n  });\n}\n","import type { Command } from 'commander';\nimport { writeFileSync } from 'node:fs';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerYield(program: Command): void {\n  program\n    .command('yield')\n    .description('Yield control back to daemon (orchestrator only)')\n    .option('--prompt <text>', 'Instructions for the next orchestrator cycle (or pipe via stdin)')\n    .action(async (opts: { prompt?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const nextPrompt = opts.prompt ?? await readStdin() ?? undefined;\n\n      const request: Request = { type: 'yield', sessionId, agentId: 'orchestrator', nextPrompt };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        writeFileSync(`/tmp/sisyphus-exit-${sessionId}`, '');\n        console.log('Yielded. Waiting for agents to complete.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { writeFileSync } from 'node:fs';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerComplete(program: Command): void {\n  program\n    .command('complete')\n    .description('Mark session as completed (orchestrator only)')\n    .requiredOption('--report <report>', 'Final completion report')\n    .action(async (opts: { report: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'complete', sessionId, report: opts.report };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        writeFileSync(`/tmp/sisyphus-exit-${sessionId}`, '');\n        console.log('Session completed.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport type { Session, Agent, OrchestratorCycle } from '../../shared/types.js';\n\nconst STATUS_COLORS: Record<string, string> = {\n  active: '\\x1b[32m',    // green\n  paused: '\\x1b[33m',    // yellow\n  completed: '\\x1b[36m', // cyan\n  running: '\\x1b[32m',   // green\n  killed: '\\x1b[31m',    // red\n  crashed: '\\x1b[31m',   // red\n  lost: '\\x1b[90m',      // gray\n};\nconst RESET = '\\x1b[0m';\nconst BOLD = '\\x1b[1m';\nconst DIM = '\\x1b[2m';\n\nfunction colorize(text: string, status: string): string {\n  const color = STATUS_COLORS[status] ?? '';\n  return `${color}${text}${RESET}`;\n}\n\nfunction formatDuration(startIso: string, endIso?: string | null): string {\n  const start = new Date(startIso).getTime();\n  const end = endIso ? new Date(endIso).getTime() : Date.now();\n  const totalSeconds = Math.floor((end - start) / 1000);\n  if (totalSeconds < 0) return '0s';\n  const hours = Math.floor(totalSeconds / 3600);\n  const minutes = Math.floor((totalSeconds % 3600) / 60);\n  const seconds = totalSeconds % 60;\n  const parts: string[] = [];\n  if (hours > 0) parts.push(`${hours}h`);\n  if (minutes > 0) parts.push(`${minutes}m`);\n  parts.push(`${seconds}s`);\n  return parts.join(' ');\n}\n\nfunction formatAgent(agent: Agent): string {\n  const status = colorize(agent.status, agent.status);\n  const name = `${BOLD}${agent.name}${RESET}`;\n  const type = `${DIM}(${agent.agentType})${RESET}`;\n  const duration = formatDuration(agent.spawnedAt, agent.completedAt);\n  let line = `    ${agent.id} ${name} ${type} — ${status} ${DIM}(${duration})${RESET}`;\n  if (agent.reports.length > 0) {\n    for (const r of agent.reports) {\n      const label = r.type === 'final' ? 'Final' : 'Update';\n      line += `\\n      ${label}: ${r.summary}`;\n    }\n  }\n  if (agent.killedReason) {\n    line += `\\n      Reason: ${agent.killedReason}`;\n  }\n  return line;\n}\n\nfunction formatCycle(cycle: OrchestratorCycle): string {\n  const duration = cycle.completedAt\n    ? ` ${DIM}(${formatDuration(cycle.timestamp, cycle.completedAt)})${RESET}`\n    : ` ${DIM}(running)${RESET}`;\n  const agents = cycle.agentsSpawned.length > 0\n    ? ` — agents: ${cycle.agentsSpawned.join(', ')}`\n    : '';\n  return `    Cycle ${cycle.cycle}${duration}${agents}`;\n}\n\nfunction printSession(session: Session): void {\n  const status = colorize(session.status, session.status);\n  const sessionDuration = formatDuration(session.createdAt, session.completedAt);\n  console.log(`\\n${BOLD}Session: ${session.id}${RESET}`);\n  console.log(`  Status: ${status}`);\n  console.log(`  Task: ${session.task}`);\n  console.log(`  CWD: ${session.cwd}`);\n  console.log(`  Created: ${session.createdAt}`);\n  console.log(`  Duration: ${sessionDuration}${session.completedAt ? '' : ' (ongoing)'}`);\n  console.log(`  Orchestrator cycles: ${session.orchestratorCycles.length}`);\n\n  if (session.orchestratorCycles.length > 0) {\n    console.log(`\\n  ${BOLD}Cycles:${RESET}`);\n    for (const cycle of session.orchestratorCycles) {\n      console.log(formatCycle(cycle));\n    }\n  }\n\n  if (session.agents.length > 0) {\n    console.log(`\\n  ${BOLD}Agents:${RESET}`);\n    for (const agent of session.agents) {\n      console.log(formatAgent(agent));\n    }\n  }\n}\n\nexport function registerStatus(program: Command): void {\n  program\n    .command('status')\n    .description('Show session status')\n    .argument('[session-id]', 'Session ID (defaults to SISYPHUS_SESSION_ID env)')\n    .action(async (sessionIdArg?: string) => {\n      const sessionId = sessionIdArg ?? process.env.SISYPHUS_SESSION_ID;\n\n      const request: Request = { type: 'status', sessionId };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const session = response.data?.session as Session | undefined;\n        if (session) {\n          printSession(session);\n        } else {\n          console.log('No session found');\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { basename } from 'node:path';\n\ninterface SessionSummary {\n  id: string;\n  task: string;\n  status: string;\n  agentCount: number;\n  createdAt: string;\n  cwd?: string;\n}\n\nconst STATUS_COLORS: Record<string, string> = {\n  active: '\\x1b[32m',\n  paused: '\\x1b[33m',\n  completed: '\\x1b[36m',\n};\nconst RESET = '\\x1b[0m';\nconst BOLD = '\\x1b[1m';\nconst DIM = '\\x1b[2m';\n\nfunction truncateTask(task: string, max: number): string {\n  if (task.length <= max) return task;\n  return task.slice(0, max - 1) + '…';\n}\n\nexport function registerList(program: Command): void {\n  program\n    .command('list')\n    .description('List sessions (defaults to current project)')\n    .option('-a, --all', 'Show sessions from all projects')\n    .action(async (opts: { all?: boolean }) => {\n      const cwd = process.cwd();\n      const request: Request = { type: 'list', cwd, all: opts.all };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const sessions = (response.data?.sessions ?? []) as SessionSummary[];\n        const totalCount = response.data?.totalCount as number | undefined;\n        const filtered = response.data?.filtered as boolean | undefined;\n\n        if (sessions.length === 0) {\n          if (filtered && totalCount && totalCount > 0) {\n            console.log(`No sessions in this project. ${totalCount} session(s) in other projects.`);\n            console.log(`${DIM}Run ${RESET}sisyphus list --all${DIM} to show all.${RESET}`);\n          } else {\n            console.log('No sessions');\n          }\n          return;\n        }\n\n        for (const s of sessions) {\n          const color = STATUS_COLORS[s.status] ?? '';\n          const status = `${color}${s.status}${RESET}`;\n          const agents = `${DIM}${s.agentCount} agent(s)${RESET}`;\n          const task = truncateTask(s.task, 60);\n          const cwdLabel = opts.all && s.cwd ? `  ${DIM}${basename(s.cwd)}${RESET}` : '';\n          console.log(`  ${BOLD}${s.id}${RESET}  ${status}  ${agents}  ${task}${cwdLabel}`);\n        }\n\n        if (filtered && totalCount && totalCount > sessions.length) {\n          const otherCount = totalCount - sessions.length;\n          console.log(`\\n${DIM}${otherCount} more session(s) in other projects. Run ${RESET}sisyphus list --all${DIM} to show all.${RESET}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerReport(program: Command): void {\n  program\n    .command('report')\n    .description('Send a progress report without exiting (agent only)')\n    .option('--message <message>', 'Progress report content')\n    .action(async (opts: { message?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      const agentId = process.env.SISYPHUS_AGENT_ID;\n      if (!sessionId || !agentId) {\n        console.error('Error: SISYPHUS_SESSION_ID and SISYPHUS_AGENT_ID environment variables must be set');\n        process.exit(1);\n      }\n\n      const content = opts.message ?? await readStdin();\n      if (!content) {\n        console.error('Error: provide --message or pipe content via stdin');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'report', sessionId, agentId, content };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log('Progress report recorded');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { getTmuxSession, getTmuxWindow } from '../tmux.js';\n\nexport function registerResume(program: Command): void {\n  program\n    .command('resume')\n    .description('Resume a paused session')\n    .argument('<session-id>', 'Session ID to resume')\n    .argument('[message]', 'Additional instructions for the orchestrator')\n    .action(async (sessionId: string, message?: string) => {\n      const tmuxSession = getTmuxSession();\n      const tmuxWindow = getTmuxWindow();\n      const cwd = process.cwd();\n      const request: Request = { type: 'resume', sessionId, cwd, tmuxSession, tmuxWindow, message };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log(`Session ${sessionId} resumed`);\n        if (response.data?.tmuxWindow) {\n          console.log(`Orchestrator respawned in tmux window: ${response.data.tmuxWindow}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\n\nexport function registerKill(program: Command): void {\n  program\n    .command('kill <sessionId>')\n    .description('Kill a running session and all its agents')\n    .action(async (sessionId: string) => {\n      const request: Request = { type: 'kill', sessionId };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log(`Session ${sessionId} killed.`);\n        if (response.data) {\n          const { killedAgents } = response.data as { killedAgents: number };\n          console.log(`Cleaned up: ${killedAgents} agent(s) killed, tmux window removed.`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { createInterface } from 'node:readline';\nimport { uninstallDaemon } from '../install.js';\n\nasync function confirm(question: string): Promise<boolean> {\n  const rl = createInterface({ input: process.stdin, output: process.stdout });\n  return new Promise((resolve) => {\n    rl.question(question, (answer) => {\n      rl.close();\n      resolve(answer.trim().toLowerCase() === 'y');\n    });\n  });\n}\n\nexport function registerUninstall(program: Command): void {\n  program\n    .command('uninstall')\n    .description('Unload the sisyphus daemon from launchd and remove the plist')\n    .option('--purge', 'Also remove all session data in ~/.sisyphus')\n    .option('-y, --yes', 'Skip confirmation prompt for --purge')\n    .action(async (opts: { purge?: boolean; yes?: boolean }) => {\n      const purge = opts.purge ?? false;\n\n      if (purge && !opts.yes) {\n        const ok = await confirm('This will delete all session data in ~/.sisyphus. Continue? (y/N) ');\n        if (!ok) {\n          console.log('Aborted.');\n          return;\n        }\n      }\n\n      await uninstallDaemon(purge);\n    });\n}\n","import type { Command } from 'commander';\nimport { rawSend } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\n\nexport function registerNotify(program: Command): void {\n  const notify = program\n    .command('notify')\n    .description('Internal notifications (fire-and-forget)');\n\n  notify\n    .command('pane-exited')\n    .description('Notify daemon that a tmux pane exited')\n    .requiredOption('--pane-id <paneId>', 'Pane ID that exited')\n    .action(async (opts: { paneId: string }) => {\n      try {\n        const request: Request = { type: 'pane-exited', paneId: opts.paneId };\n        await rawSend(request);\n      } catch {\n        // Fire-and-forget: daemon may be stopped, socket gone, etc.\n      }\n    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+{"version":3,"sources":["../src/cli/index.ts","../src/cli/client.ts","../src/cli/install.ts","../src/cli/tmux.ts","../src/cli/commands/start.ts","../src/cli/commands/spawn.ts","../src/cli/commands/submit.ts","../src/cli/stdin.ts","../src/cli/commands/yield.ts","../src/cli/commands/complete.ts","../src/cli/commands/status.ts","../src/cli/commands/list.ts","../src/cli/commands/report.ts","../src/cli/commands/resume.ts","../src/cli/commands/kill.ts","../src/cli/commands/uninstall.ts","../src/cli/commands/notify.ts"],"sourcesContent":["import { Command } from 'commander';\nimport { registerStart } from './commands/start.js';\nimport { registerSpawn } from './commands/spawn.js';\nimport { registerSubmit } from './commands/submit.js';\nimport { registerYield } from './commands/yield.js';\nimport { registerComplete } from './commands/complete.js';\nimport { registerStatus } from './commands/status.js';\nimport { registerList } from './commands/list.js';\nimport { registerReport } from './commands/report.js';\nimport { registerResume } from './commands/resume.js';\nimport { registerKill } from './commands/kill.js';\nimport { registerUninstall } from './commands/uninstall.js';\nimport { registerNotify } from './commands/notify.js';\n\nconst program = new Command();\n\nprogram\n  .name('sisyphus')\n  .description('tmux-integrated orchestration daemon for Claude Code')\n  .version('0.1.0');\n\nregisterStart(program);\nregisterSpawn(program);\nregisterSubmit(program);\nregisterReport(program);\nregisterYield(program);\nregisterComplete(program);\nregisterStatus(program);\nregisterList(program);\nregisterResume(program);\nregisterKill(program);\nregisterUninstall(program);\nregisterNotify(program);\n\nprogram.parseAsync(process.argv).catch((err: Error) => {\n  console.error(err.message);\n  process.exit(1);\n});\n","import { connect } from 'node:net';\nimport { socketPath } from '../shared/paths.js';\nimport type { Request, Response } from '../shared/protocol.js';\nimport { ensureDaemonInstalled, waitForDaemon } from './install.js';\n\nexport function rawSend(request: Request): Promise<Response> {\n  const sock = socketPath();\n\n  return new Promise<Response>((resolve, reject) => {\n    const socket = connect(sock);\n    let data = '';\n\n    const timeout = setTimeout(() => {\n      socket.destroy();\n      reject(new Error('Request timed out after 10s'));\n    }, 10_000);\n\n    socket.on('connect', () => {\n      socket.write(JSON.stringify(request) + '\\n');\n    });\n\n    socket.on('data', (chunk) => {\n      data += chunk.toString();\n      const newlineIdx = data.indexOf('\\n');\n      if (newlineIdx !== -1) {\n        clearTimeout(timeout);\n        const line = data.slice(0, newlineIdx);\n        socket.destroy();\n        try {\n          resolve(JSON.parse(line) as Response);\n        } catch {\n          reject(new Error(`Invalid JSON response from daemon: ${line}`));\n        }\n      }\n    });\n\n    socket.on('error', (err) => {\n      clearTimeout(timeout);\n      reject(err);\n    });\n  });\n}\n\nexport async function sendRequest(request: Request): Promise<Response> {\n  const sleep = (ms: number) => new Promise<void>((resolve) => setTimeout(resolve, ms));\n  const MAX_ATTEMPTS = 5;\n  const RETRY_DELAY_MS = 2000;\n  let installedDaemon = false;\n  let lastErr: unknown;\n\n  for (let attempt = 1; attempt <= MAX_ATTEMPTS; attempt++) {\n    try {\n      return await rawSend(request);\n    } catch (err) {\n      lastErr = err;\n      const code = (err as NodeJS.ErrnoException).code;\n      if (code !== 'ENOENT' && code !== 'ECONNREFUSED') {\n        throw err;\n      }\n\n      if (attempt === MAX_ATTEMPTS) break;\n\n      if (process.platform === 'darwin' && !installedDaemon) {\n        installedDaemon = true;\n        await ensureDaemonInstalled();\n        await waitForDaemon(5000);\n      } else {\n        process.stderr.write(`Daemon not ready, retrying (${attempt}/${MAX_ATTEMPTS - 1})...\\n`);\n        await sleep(RETRY_DELAY_MS);\n      }\n    }\n  }\n\n  if (process.platform !== 'darwin') {\n    throw new Error(\n      `Sisyphus daemon is not running.\\n` +\n      `  Start it manually: sisyphusd &\\n` +\n      `  Or check logs at: ~/.sisyphus/daemon.log`\n    );\n  }\n  throw lastErr;\n}\n","import { execSync } from 'node:child_process';\nimport { existsSync, mkdirSync, readFileSync, rmSync, unlinkSync, writeFileSync } from 'node:fs';\nimport { connect } from 'node:net';\nimport { homedir } from 'node:os';\nimport { dirname, join, resolve } from 'node:path';\nimport { fileURLToPath } from 'node:url';\nimport { daemonLogPath, daemonUpdatingPath, globalDir, socketPath } from '../shared/paths.js';\n\nconst PLIST_LABEL = 'com.sisyphus.daemon';\nconst PLIST_FILENAME = `${PLIST_LABEL}.plist`;\n\nfunction launchAgentDir(): string {\n  return join(homedir(), 'Library', 'LaunchAgents');\n}\n\nfunction plistPath(): string {\n  return join(launchAgentDir(), PLIST_FILENAME);\n}\n\nfunction daemonBinPath(): string {\n  // In bundled output, cli.js and daemon.js are siblings in dist/\n  const installDir = dirname(fileURLToPath(import.meta.url));\n  return resolve(installDir, 'daemon.js');\n}\n\nfunction generatePlist(nodePath: string, daemonPath: string, logPath: string): string {\n  return `<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<!DOCTYPE plist PUBLIC \"-//Apple//DTD PLIST 1.0//EN\" \"http://www.apple.com/DTDs/PropertyList-1.0.dtd\">\n<plist version=\"1.0\">\n<dict>\n  <key>Label</key>\n  <string>${PLIST_LABEL}</string>\n  <key>ProgramArguments</key>\n  <array>\n    <string>${nodePath}</string>\n    <string>${daemonPath}</string>\n  </array>\n  <key>RunAtLoad</key>\n  <true/>\n  <key>KeepAlive</key>\n  <true/>\n  <key>StandardOutPath</key>\n  <string>${logPath}</string>\n  <key>StandardErrorPath</key>\n  <string>${logPath}</string>\n</dict>\n</plist>\n`;\n}\n\nexport function isInstalled(): boolean {\n  return existsSync(plistPath());\n}\n\nexport async function ensureDaemonInstalled(): Promise<void> {\n  if (process.platform !== 'darwin') return;\n\n  if (!isInstalled()) {\n    const nodePath = process.execPath;\n    const daemonPath = daemonBinPath();\n    const logPath = daemonLogPath();\n\n    mkdirSync(globalDir(), { recursive: true });\n    mkdirSync(launchAgentDir(), { recursive: true });\n\n    const plist = generatePlist(nodePath, daemonPath, logPath);\n    writeFileSync(plistPath(), plist, 'utf8');\n\n    execSync(`launchctl load -w ${plistPath()}`);\n  }\n\n  await waitForDaemon();\n}\n\nexport async function uninstallDaemon(purge: boolean): Promise<void> {\n  if (process.platform !== 'darwin') {\n    console.log('Auto-install is only supported on macOS.');\n    return;\n  }\n\n  const plist = plistPath();\n  if (existsSync(plist)) {\n    try {\n      execSync(`launchctl unload -w ${plist}`, { stdio: 'pipe' });\n    } catch {\n      // already unloaded or not registered — ignore\n    }\n    unlinkSync(plist);\n    console.log('Daemon unloaded and plist removed.');\n  } else {\n    console.log('Daemon is not installed (plist not found).');\n  }\n\n  if (purge) {\n    const dir = globalDir();\n    if (existsSync(dir)) {\n      rmSync(dir, { recursive: true, force: true });\n      console.log(`Removed ${dir}`);\n    }\n  }\n}\n\nfunction testConnection(): Promise<void> {\n  return new Promise((resolve, reject) => {\n    const sock = connect(socketPath());\n    sock.on('connect', () => { sock.destroy(); resolve(); });\n    sock.on('error', (err) => { sock.destroy(); reject(err); });\n  });\n}\n\nfunction sleep(ms: number): Promise<void> {\n  return new Promise((resolve) => setTimeout(resolve, ms));\n}\n\nexport async function waitForDaemon(maxWaitMs = 6000): Promise<void> {\n  const start = Date.now();\n  let updatingLogged = false;\n\n  while (Date.now() - start < maxWaitMs) {\n    // Extend timeout if daemon is updating\n    const updatingPath = daemonUpdatingPath();\n    if (existsSync(updatingPath)) {\n      if (!updatingLogged) {\n        try {\n          const version = readFileSync(updatingPath, 'utf-8').trim();\n          console.log(`Updating sisyphus to ${version}...`);\n        } catch {\n          console.log('Updating sisyphus...');\n        }\n        updatingLogged = true;\n      }\n      maxWaitMs = Math.max(maxWaitMs, 30000);\n    }\n\n    if (existsSync(socketPath())) {\n      try {\n        await testConnection();\n        return;\n      } catch {\n        // not ready yet\n      }\n    }\n    await sleep(300);\n  }\n  throw new Error(`Daemon did not start within ${maxWaitMs}ms. Check ${daemonLogPath()}`);\n}\n","import { execSync } from 'node:child_process';\n\nexport function assertTmux(): void {\n  if (!process.env.TMUX) {\n    throw new Error('Not running inside a tmux pane. Sisyphus requires tmux.');\n  }\n}\n\nexport function getTmuxSession(): string {\n  assertTmux();\n  return execSync('tmux display-message -p \"#{session_name}\"', { encoding: 'utf8' }).trim();\n}\n\nexport function getTmuxWindow(): string {\n  assertTmux();\n  return execSync('tmux display-message -p \"#{window_id}\"', { encoding: 'utf8' }).trim();\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { getTmuxSession, getTmuxWindow } from '../tmux.js';\n\nexport function registerStart(program: Command): void {\n  program\n    .command('start')\n    .description('Start a new sisyphus session')\n    .argument('<task>', 'Task description for the orchestrator')\n    .action(async (task: string) => {\n      const tmuxSession = getTmuxSession();\n      const tmuxWindow = getTmuxWindow();\n      const request: Request = { type: 'start', task, cwd: process.cwd(), tmuxSession, tmuxWindow };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const sessionId = response.data?.sessionId as string;\n        console.log(`Session started: ${sessionId}`);\n        if (response.data?.tmuxWindow) {\n          console.log(`Orchestrator spawned in tmux window: ${response.data.tmuxWindow}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerSpawn(program: Command): void {\n  program\n    .command('spawn')\n    .description('Spawn a new agent (orchestrator only)')\n    .option('--agent-type <type>', 'Agent role label (default: worker)', 'worker')\n    .requiredOption('--name <name>', 'Agent name')\n    .requiredOption('--instruction <instruction>', 'Task instruction for the agent')\n    .option('--worktree', 'Spawn agent in an isolated git worktree')\n    .action(async (opts: { agentType: string; name: string; instruction: string; worktree?: boolean }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const request: Request = {\n        type: 'spawn',\n        sessionId,\n        agentType: opts.agentType,\n        name: opts.name,\n        instruction: opts.instruction,\n        ...(opts.worktree ? { worktree: true } : {}),\n      };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const agentId = response.data?.agentId as string;\n        console.log(`Agent spawned: ${agentId}`);\n        console.log(\"Run `sisyphus yield` when done spawning agents.\");\n      } else {\n        console.error(`Error: ${response.error}`);\n        if (response.error?.includes(\"Unknown session\")) console.error(\"Hint: run `sisyphus list` to see active sessions.\");\n        process.exit(1);\n      }\n    });\n}\n","import { execSync } from 'node:child_process';\nimport type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nfunction isInWorktree(): boolean {\n  try {\n    const gitDir = execSync('git rev-parse --git-dir', { encoding: 'utf-8' }).trim();\n    const commonDir = execSync('git rev-parse --git-common-dir', { encoding: 'utf-8' }).trim();\n    return gitDir !== commonDir;\n  } catch {\n    return false;\n  }\n}\n\nfunction getUncommittedChanges(): string | null {\n  try {\n    const status = execSync('git status --porcelain', { encoding: 'utf-8' }).trim();\n    return status || null;\n  } catch {\n    return null;\n  }\n}\n\nexport function registerSubmit(program: Command): void {\n  program\n    .command('submit')\n    .description('Submit work report and exit (agent only)')\n    .option('--report <report>', 'Work report (or pipe via stdin)')\n    .action(async (opts: { report?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      const agentId = process.env.SISYPHUS_AGENT_ID;\n      if (!sessionId || !agentId) {\n        console.error('Error: SISYPHUS_SESSION_ID and SISYPHUS_AGENT_ID environment variables must be set');\n        process.exit(1);\n      }\n\n      // Block submit if worktree has uncommitted changes — they'd be lost on merge\n      if (isInWorktree()) {\n        const changes = getUncommittedChanges();\n        if (changes) {\n          console.error('Error: uncommitted changes in worktree. Your branch is merged automatically after submit — uncommitted work will be lost.');\n          console.error('\\nCommit first:\\n  git add -A && git commit -m \"description of changes\"\\n');\n          console.error('Or discard:\\n  git checkout -- .\\n');\n          console.error('Uncommitted changes:');\n          console.error(changes);\n          process.exit(1);\n        }\n      }\n\n      const report = opts.report ?? await readStdin();\n      if (!report) {\n        console.error('Error: provide --report or pipe content via stdin');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'submit', sessionId, agentId, report };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log('Report submitted successfully');\n        console.log('Your pane will close. The orchestrator resumes when all agents finish.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","export function readStdin(): Promise<string | null> {\n  if (process.stdin.isTTY) return Promise.resolve(null);\n\n  return new Promise((resolve, reject) => {\n    const chunks: Buffer[] = [];\n    process.stdin.on('data', (chunk: Buffer) => chunks.push(chunk));\n    process.stdin.on('end', () => {\n      const text = Buffer.concat(chunks).toString('utf-8').trim();\n      resolve(text || null);\n    });\n    process.stdin.on('error', reject);\n  });\n}\n","import type { Command } from 'commander';\nimport { writeFileSync } from 'node:fs';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerYield(program: Command): void {\n  program\n    .command('yield')\n    .description('Yield control back to daemon (orchestrator only)')\n    .option('--prompt <text>', 'Instructions for the next orchestrator cycle (or pipe via stdin)')\n    .action(async (opts: { prompt?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const nextPrompt = opts.prompt ?? await readStdin() ?? undefined;\n\n      const request: Request = { type: 'yield', sessionId, agentId: 'orchestrator', nextPrompt };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        writeFileSync(`/tmp/sisyphus-exit-${sessionId}`, '');\n        console.log('Yielded. Waiting for agents to complete.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { writeFileSync } from 'node:fs';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerComplete(program: Command): void {\n  program\n    .command('complete')\n    .description('Mark session as completed (orchestrator only)')\n    .requiredOption('--report <report>', 'Final completion report')\n    .action(async (opts: { report: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      if (!sessionId) {\n        console.error('Error: SISYPHUS_SESSION_ID environment variable not set');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'complete', sessionId, report: opts.report };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        writeFileSync(`/tmp/sisyphus-exit-${sessionId}`, '');\n        console.log('Session completed.');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport type { Session, Agent, OrchestratorCycle } from '../../shared/types.js';\n\nconst STATUS_COLORS: Record<string, string> = {\n  active: '\\x1b[32m',    // green\n  paused: '\\x1b[33m',    // yellow\n  completed: '\\x1b[36m', // cyan\n  running: '\\x1b[32m',   // green\n  killed: '\\x1b[31m',    // red\n  crashed: '\\x1b[31m',   // red\n  lost: '\\x1b[90m',      // gray\n};\nconst RESET = '\\x1b[0m';\nconst BOLD = '\\x1b[1m';\nconst DIM = '\\x1b[2m';\n\nfunction colorize(text: string, status: string): string {\n  const color = STATUS_COLORS[status] ?? '';\n  return `${color}${text}${RESET}`;\n}\n\nfunction formatDuration(startIso: string, endIso?: string | null): string {\n  const start = new Date(startIso).getTime();\n  const end = endIso ? new Date(endIso).getTime() : Date.now();\n  const totalSeconds = Math.floor((end - start) / 1000);\n  if (totalSeconds < 0) return '0s';\n  const hours = Math.floor(totalSeconds / 3600);\n  const minutes = Math.floor((totalSeconds % 3600) / 60);\n  const seconds = totalSeconds % 60;\n  const parts: string[] = [];\n  if (hours > 0) parts.push(`${hours}h`);\n  if (minutes > 0) parts.push(`${minutes}m`);\n  parts.push(`${seconds}s`);\n  return parts.join(' ');\n}\n\nfunction formatAgent(agent: Agent): string {\n  const status = colorize(agent.status, agent.status);\n  const name = `${BOLD}${agent.name}${RESET}`;\n  const type = `${DIM}(${agent.agentType})${RESET}`;\n  const duration = formatDuration(agent.spawnedAt, agent.completedAt);\n  let line = `    ${agent.id} ${name} ${type} — ${status} ${DIM}(${duration})${RESET}`;\n  if (agent.reports.length > 0) {\n    for (const r of agent.reports) {\n      const label = r.type === 'final' ? 'Final' : 'Update';\n      line += `\\n      ${label}: ${r.summary}`;\n    }\n  }\n  if (agent.killedReason) {\n    line += `\\n      Reason: ${agent.killedReason}`;\n  }\n  return line;\n}\n\nfunction formatCycle(cycle: OrchestratorCycle): string {\n  const duration = cycle.completedAt\n    ? ` ${DIM}(${formatDuration(cycle.timestamp, cycle.completedAt)})${RESET}`\n    : ` ${DIM}(running)${RESET}`;\n  const agents = cycle.agentsSpawned.length > 0\n    ? ` — agents: ${cycle.agentsSpawned.join(', ')}`\n    : '';\n  return `    Cycle ${cycle.cycle}${duration}${agents}`;\n}\n\nfunction printSession(session: Session): void {\n  const status = colorize(session.status, session.status);\n  const sessionDuration = formatDuration(session.createdAt, session.completedAt);\n  console.log(`\\n${BOLD}Session: ${session.id}${RESET}`);\n  console.log(`  Status: ${status}`);\n  console.log(`  Task: ${session.task}`);\n  console.log(`  CWD: ${session.cwd}`);\n  console.log(`  Created: ${session.createdAt}`);\n  console.log(`  Duration: ${sessionDuration}${session.completedAt ? '' : ' (ongoing)'}`);\n  console.log(`  Orchestrator cycles: ${session.orchestratorCycles.length}`);\n\n  if (session.orchestratorCycles.length > 0) {\n    console.log(`\\n  ${BOLD}Cycles:${RESET}`);\n    for (const cycle of session.orchestratorCycles) {\n      console.log(formatCycle(cycle));\n    }\n  }\n\n  if (session.agents.length > 0) {\n    console.log(`\\n  ${BOLD}Agents:${RESET}`);\n    for (const agent of session.agents) {\n      console.log(formatAgent(agent));\n    }\n  }\n}\n\nexport function registerStatus(program: Command): void {\n  program\n    .command('status')\n    .description('Show session status')\n    .argument('[session-id]', 'Session ID (defaults to SISYPHUS_SESSION_ID env)')\n    .action(async (sessionIdArg?: string) => {\n      const sessionId = sessionIdArg ?? process.env.SISYPHUS_SESSION_ID;\n\n      const request: Request = { type: 'status', sessionId };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const session = response.data?.session as Session | undefined;\n        if (session) {\n          printSession(session);\n        } else {\n          console.log('No session found');\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { basename } from 'node:path';\n\ninterface SessionSummary {\n  id: string;\n  task: string;\n  status: string;\n  agentCount: number;\n  createdAt: string;\n  cwd?: string;\n}\n\nconst STATUS_COLORS: Record<string, string> = {\n  active: '\\x1b[32m',\n  paused: '\\x1b[33m',\n  completed: '\\x1b[36m',\n};\nconst RESET = '\\x1b[0m';\nconst BOLD = '\\x1b[1m';\nconst DIM = '\\x1b[2m';\n\nfunction truncateTask(task: string, max: number): string {\n  if (task.length <= max) return task;\n  return task.slice(0, max - 1) + '…';\n}\n\nexport function registerList(program: Command): void {\n  program\n    .command('list')\n    .description('List sessions (defaults to current project)')\n    .option('-a, --all', 'Show sessions from all projects')\n    .action(async (opts: { all?: boolean }) => {\n      const cwd = process.cwd();\n      const request: Request = { type: 'list', cwd, all: opts.all };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        const sessions = (response.data?.sessions ?? []) as SessionSummary[];\n        const totalCount = response.data?.totalCount as number | undefined;\n        const filtered = response.data?.filtered as boolean | undefined;\n\n        if (sessions.length === 0) {\n          if (filtered && totalCount && totalCount > 0) {\n            console.log(`No sessions in this project. ${totalCount} session(s) in other projects.`);\n            console.log(`${DIM}Run ${RESET}sisyphus list --all${DIM} to show all.${RESET}`);\n          } else {\n            console.log('No sessions');\n          }\n          return;\n        }\n\n        for (const s of sessions) {\n          const color = STATUS_COLORS[s.status] ?? '';\n          const status = `${color}${s.status}${RESET}`;\n          const agents = `${DIM}${s.agentCount} agent(s)${RESET}`;\n          const task = truncateTask(s.task, 60);\n          const cwdLabel = opts.all && s.cwd ? `  ${DIM}${basename(s.cwd)}${RESET}` : '';\n          console.log(`  ${BOLD}${s.id}${RESET}  ${status}  ${agents}  ${task}${cwdLabel}`);\n        }\n\n        if (filtered && totalCount && totalCount > sessions.length) {\n          const otherCount = totalCount - sessions.length;\n          console.log(`\\n${DIM}${otherCount} more session(s) in other projects. Run ${RESET}sisyphus list --all${DIM} to show all.${RESET}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { readStdin } from '../stdin.js';\nimport { assertTmux } from '../tmux.js';\n\nexport function registerReport(program: Command): void {\n  program\n    .command('report')\n    .description('Send a progress report without exiting (agent only)')\n    .option('--message <message>', 'Progress report content')\n    .action(async (opts: { message?: string }) => {\n      assertTmux();\n      const sessionId = process.env.SISYPHUS_SESSION_ID;\n      const agentId = process.env.SISYPHUS_AGENT_ID;\n      if (!sessionId || !agentId) {\n        console.error('Error: SISYPHUS_SESSION_ID and SISYPHUS_AGENT_ID environment variables must be set');\n        process.exit(1);\n      }\n\n      const content = opts.message ?? await readStdin();\n      if (!content) {\n        console.error('Error: provide --message or pipe content via stdin');\n        process.exit(1);\n      }\n\n      const request: Request = { type: 'report', sessionId, agentId, content };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log('Progress report recorded');\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\nimport { getTmuxSession, getTmuxWindow } from '../tmux.js';\n\nexport function registerResume(program: Command): void {\n  program\n    .command('resume')\n    .description('Resume a paused session')\n    .argument('<session-id>', 'Session ID to resume')\n    .argument('[message]', 'Additional instructions for the orchestrator')\n    .action(async (sessionId: string, message?: string) => {\n      const tmuxSession = getTmuxSession();\n      const tmuxWindow = getTmuxWindow();\n      const cwd = process.cwd();\n      const request: Request = { type: 'resume', sessionId, cwd, tmuxSession, tmuxWindow, message };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log(`Session ${sessionId} resumed`);\n        if (response.data?.tmuxWindow) {\n          console.log(`Orchestrator respawned in tmux window: ${response.data.tmuxWindow}`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { sendRequest } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\n\nexport function registerKill(program: Command): void {\n  program\n    .command('kill <sessionId>')\n    .description('Kill a running session and all its agents')\n    .action(async (sessionId: string) => {\n      const request: Request = { type: 'kill', sessionId };\n      const response = await sendRequest(request);\n      if (response.ok) {\n        console.log(`Session ${sessionId} killed.`);\n        if (response.data) {\n          const { killedAgents } = response.data as { killedAgents: number };\n          console.log(`Cleaned up: ${killedAgents} agent(s) killed, tmux window removed.`);\n        }\n      } else {\n        console.error(`Error: ${response.error}`);\n        process.exit(1);\n      }\n    });\n}\n","import type { Command } from 'commander';\nimport { createInterface } from 'node:readline';\nimport { uninstallDaemon } from '../install.js';\n\nasync function confirm(question: string): Promise<boolean> {\n  const rl = createInterface({ input: process.stdin, output: process.stdout });\n  return new Promise((resolve) => {\n    rl.question(question, (answer) => {\n      rl.close();\n      resolve(answer.trim().toLowerCase() === 'y');\n    });\n  });\n}\n\nexport function registerUninstall(program: Command): void {\n  program\n    .command('uninstall')\n    .description('Unload the sisyphus daemon from launchd and remove the plist')\n    .option('--purge', 'Also remove all session data in ~/.sisyphus')\n    .option('-y, --yes', 'Skip confirmation prompt for --purge')\n    .action(async (opts: { purge?: boolean; yes?: boolean }) => {\n      const purge = opts.purge ?? false;\n\n      if (purge && !opts.yes) {\n        const ok = await confirm('This will delete all session data in ~/.sisyphus. Continue? (y/N) ');\n        if (!ok) {\n          console.log('Aborted.');\n          return;\n        }\n      }\n\n      await uninstallDaemon(purge);\n    });\n}\n","import type { Command } from 'commander';\nimport { rawSend } from '../client.js';\nimport type { Request } from '../../shared/protocol.js';\n\nexport function registerNotify(program: Command): void {\n  const notify = program\n    .command('notify')\n    .description('Internal notifications (fire-and-forget)');\n\n  notify\n    .command('pane-exited')\n    .description('Notify daemon that a tmux pane exited')\n    .requiredOption('--pane-id <paneId>', 'Pane ID that exited')\n    .action(async (opts: { paneId: string }) => {\n      try {\n        const request: Request = { type: 'pane-exited', paneId: opts.paneId };\n        await rawSend(request);\n      } catch {\n        // Fire-and-forget: daemon may be stopped, socket gone, etc.\n      }\n    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package/dist/daemon.js

@@ -2,6 +2,7 @@
 import {
   contextDir,
   daemonPidPath,
+  daemonUpdatingPath,
   globalConfigPath,
   globalDir,
   logsPath,
@@ -17,10 +18,10 @@ import {
   statePath,
   worktreeBaseDir,
   worktreeConfigPath
-} from "./chunk-N2BPQOO2.js";
+} from "./chunk-LTAW6OWS.js";
 
 // src/daemon/index.ts
-import { mkdirSync as mkdirSync5, readFileSync as readFileSync9, writeFileSync as writeFileSync5, unlinkSync as unlinkSync2, existsSync as existsSync6 } from "fs";
+import { mkdirSync as mkdirSync5, readFileSync as readFileSync9, writeFileSync as writeFileSync6, unlinkSync as unlinkSync3, existsSync as existsSync6 } from "fs";
 import { execSync as execSync4 } from "child_process";
 import { setTimeout as sleep } from "timers/promises";
 
@@ -1408,7 +1409,7 @@ function stopServer() {
 
 // src/daemon/updater.ts
 import { execSync as execSync3 } from "child_process";
-import { readFileSync as readFileSync8 } from "fs";
+import { readFileSync as readFileSync8, writeFileSync as writeFileSync5, unlinkSync as unlinkSync2 } from "fs";
 import { resolve as resolve3 } from "path";
 import { get } from "https";
 function isNewer(latest, current) {
@@ -1486,17 +1487,33 @@ function applyUpdate(expectedVersion) {
     return false;
   }
 }
+function markUpdating(version) {
+  try {
+    writeFileSync5(daemonUpdatingPath(), version, "utf-8");
+  } catch {
+  }
+}
+function clearUpdating() {
+  try {
+    unlinkSync2(daemonUpdatingPath());
+  } catch {
+  }
+}
 async function checkAndApply() {
+  clearUpdating();
   try {
     const update = await checkForUpdate();
     if (!update) return;
     console.log(`[sisyphus] Update available: ${update.current} \u2192 ${update.latest}`);
+    markUpdating(update.latest);
     const success = applyUpdate(update.latest);
     if (success) {
       console.log(`[sisyphus] Updated to ${update.latest}, restarting daemon...`);
       process.exit(0);
     }
+    clearUpdating();
   } catch (err) {
+    clearUpdating();
     console.error("[sisyphus] Auto-update check failed:", err);
   }
 }
@@ -1528,7 +1545,7 @@ function acquirePidLock() {
     console.error(`[sisyphus] Daemon already running (pid ${pid}). Use 'sisyphusd restart' or 'sisyphusd stop' first.`);
     process.exit(0);
   }
-  writeFileSync5(daemonPidPath(), String(process.pid), "utf-8");
+  writeFileSync6(daemonPidPath(), String(process.pid), "utf-8");
 }
 function isLaunchdManaged() {
   try {
@@ -1540,7 +1557,7 @@ function isLaunchdManaged() {
 }
 function releasePidLock() {
   try {
-    unlinkSync2(daemonPidPath());
+    unlinkSync3(daemonPidPath());
   } catch {
   }
 }
@@ -1668,6 +1685,7 @@ async function startDaemon() {
   process.on("SIGTERM", shutdown);
   process.on("SIGINT", shutdown);
 }
+process.title = "sisyphusd";
 var command = process.argv[2];
 (async () => {
   switch (command) {

package/dist/daemon.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/daemon/index.ts","../src/shared/config.ts","../src/daemon/server.ts","../src/daemon/session-manager.ts","../src/daemon/state.ts","../src/daemon/orchestrator.ts","../src/daemon/colors.ts","../src/daemon/tmux.ts","../src/daemon/pane-registry.ts","../src/daemon/agent.ts","../src/daemon/worktree.ts","../src/daemon/pane-monitor.ts","../src/daemon/updater.ts"],"sourcesContent":["import { mkdirSync, readFileSync, writeFileSync, unlinkSync, existsSync } from 'node:fs';\nimport { execSync } from 'node:child_process';\nimport { setTimeout as sleep } from 'node:timers/promises';\nimport { globalDir, daemonPidPath, statePath } from '../shared/paths.js';\nimport { loadConfig } from '../shared/config.js';\nimport { startServer, stopServer, registerSessionCwd, registerSessionTmux, loadSessionRegistry } from './server.js';\nimport { startMonitor, stopMonitor, setRespawnCallback, trackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { onAllAgentsDone } from './session-manager.js';\nimport { resetAgentCounterFromState } from './agent.js';\nimport { setWindowId, setOrchestratorPaneId, getOrchestratorPaneId } from './orchestrator.js';\nimport { listPanes } from './tmux.js';\nimport { registerPane } from './pane-registry.js';\nimport * as stateModule from './state.js';\nimport type { Session } from '../shared/types.js';\nimport { checkAndApply } from './updater.js';\n\nfunction ensureDirs(): void {\n  mkdirSync(globalDir(), { recursive: true });\n}\n\nfunction isProcessAlive(pid: number): boolean {\n  try {\n    process.kill(pid, 0);\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction readPid(): number | null {\n  const pidFile = daemonPidPath();\n  try {\n    const pid = parseInt(readFileSync(pidFile, 'utf-8').trim(), 10);\n    return pid && isProcessAlive(pid) ? pid : null;\n  } catch {\n    return null;\n  }\n}\n\nfunction acquirePidLock(): void {\n  const pid = readPid();\n  if (pid) {\n    console.error(`[sisyphus] Daemon already running (pid ${pid}). Use 'sisyphusd restart' or 'sisyphusd stop' first.`);\n    process.exit(0);\n  }\n  writeFileSync(daemonPidPath(), String(process.pid), 'utf-8');\n}\n\nfunction isLaunchdManaged(): boolean {\n  try {\n    execSync('launchctl list com.sisyphus.daemon', { stdio: 'pipe' });\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction releasePidLock(): void {\n  try {\n    unlinkSync(daemonPidPath());\n  } catch {\n    // Already gone\n  }\n}\n\nfunction stopDaemon(): boolean {\n  const pid = readPid();\n  if (!pid) {\n    console.log('[sisyphus] Daemon is not running');\n    // Clean up stale pid file if it exists\n    releasePidLock();\n    return false;\n  }\n\n  console.log(`[sisyphus] Stopping daemon (pid ${pid})...`);\n  try {\n    process.kill(pid, 'SIGTERM');\n  } catch {\n    console.error(`[sisyphus] Failed to send SIGTERM to pid ${pid}`);\n    return false;\n  }\n\n  // Wait for process to exit (up to 5s)\n  const deadline = Date.now() + 5000;\n  while (Date.now() < deadline) {\n    if (!isProcessAlive(pid)) {\n      console.log('[sisyphus] Daemon stopped');\n      releasePidLock();\n      return true;\n    }\n    // Busy-wait in small increments (synchronous — fine for a CLI command)\n    const wait = Date.now() + 100;\n    while (Date.now() < wait) { /* spin */ }\n  }\n\n  console.error(`[sisyphus] Daemon (pid ${pid}) did not exit within 5s, sending SIGKILL`);\n  try {\n    process.kill(pid, 'SIGKILL');\n  } catch { /* already dead */ }\n  releasePidLock();\n  return true;\n}\n\nasync function recoverSessions(): Promise<void> {\n  const registry = loadSessionRegistry();\n  const entries = Object.entries(registry);\n\n  if (entries.length === 0) {\n    console.log('[sisyphus] No sessions to recover');\n    return;\n  }\n\n  let recovered = 0;\n  for (const [sessionId, cwd] of entries) {\n    const stateFile = statePath(cwd, sessionId);\n    if (!existsSync(stateFile)) {\n      continue;\n    }\n\n    try {\n      const session = JSON.parse(readFileSync(stateFile, 'utf-8')) as Session;\n      if (session.status === 'active' || session.status === 'paused') {\n        registerSessionCwd(sessionId, cwd);\n        resetAgentCounterFromState(sessionId, session.agents ?? []);\n\n        // Reconnect to tmux panes if info was persisted\n        if (session.tmuxSessionName && session.tmuxWindowId) {\n          const livePanes = listPanes(session.tmuxWindowId);\n          if (livePanes.length > 0) {\n            registerSessionTmux(sessionId, session.tmuxSessionName, session.tmuxWindowId);\n            setWindowId(sessionId, session.tmuxWindowId);\n            trackSession(sessionId, cwd, session.tmuxSessionName);\n            updateTrackedWindow(sessionId, session.tmuxWindowId);\n\n            // Recover orchestrator pane from last incomplete cycle\n            const lastIncompleteCycle = [...session.orchestratorCycles].reverse().find(c => !c.completedAt && c.paneId);\n            if (lastIncompleteCycle?.paneId) {\n              setOrchestratorPaneId(sessionId, lastIncompleteCycle.paneId);\n              const livePaneIds = new Set(livePanes.map(p => p.paneId));\n              if (livePaneIds.has(lastIncompleteCycle.paneId)) {\n                registerPane(lastIncompleteCycle.paneId, sessionId, 'orchestrator');\n              }\n            }\n\n            // Register live agent panes\n            for (const agent of session.agents) {\n              if (agent.status === 'running' && agent.paneId) {\n                const livePaneIds = new Set(livePanes.map(p => p.paneId));\n                if (livePaneIds.has(agent.paneId)) {\n                  registerPane(agent.paneId, sessionId, 'agent', agent.id);\n                }\n              }\n            }\n\n            console.log(`[sisyphus] Reconnected session ${sessionId} to tmux window ${session.tmuxWindowId}`);\n\n            // Detect sessions stuck in \"all agents done, no orchestrator\" state\n            if (session.status === 'active' && session.agents.length > 0) {\n              const hasRunningAgents = session.agents.some(a => a.status === 'running');\n              if (!hasRunningAgents) {\n                const livePaneIds = new Set(livePanes.map(p => p.paneId));\n                const orchestratorPaneId = getOrchestratorPaneId(sessionId);\n                const orchestratorAlive = orchestratorPaneId && livePaneIds.has(orchestratorPaneId);\n                if (!orchestratorAlive) {\n                  console.log(`[sisyphus] Detected stuck session ${sessionId} on recovery: triggering orchestrator respawn`);\n                  await onAllAgentsDone(sessionId, cwd, session.tmuxWindowId!);\n                }\n              }\n            }\n          } else {\n            // Window gone — pause the session so user can `sisyphus resume`\n            if (session.status === 'active') {\n              await stateModule.updateSessionStatus(cwd, sessionId, 'paused');\n              console.log(`[sisyphus] Session ${sessionId} paused: tmux window no longer exists`);\n            }\n          }\n        }\n\n        recovered++;\n      }\n    } catch {\n      console.error(`[sisyphus] Failed to read session state for ${sessionId}, skipping`);\n    }\n  }\n\n  console.log(`[sisyphus] Recovered ${recovered} session(s) from registry`);\n}\n\nasync function startDaemon(): Promise<void> {\n  console.log('[sisyphus] Starting daemon...');\n  ensureDirs();\n\n  const config = loadConfig(process.cwd());\n  if (config.autoUpdate !== false) {\n    await checkAndApply(); // may exit process if update found\n  }\n\n  acquirePidLock();\n\n  setRespawnCallback(onAllAgentsDone);\n\n  await startServer();\n  startMonitor(config.pollIntervalMs);\n\n  await recoverSessions();\n\n  const shutdown = async () => {\n    console.log('[sisyphus] Shutting down...');\n    stopMonitor();\n    await stopServer();\n    releasePidLock();\n    process.exit(0);\n  };\n\n  process.on('SIGTERM', shutdown);\n  process.on('SIGINT', shutdown);\n}\n\nconst command = process.argv[2];\n\n(async () => {\n  switch (command) {\n    case 'stop':\n      stopDaemon();\n      break;\n\n    case 'restart': {\n      stopDaemon();\n      // If launchd is managing the daemon, just exit — it will respawn via KeepAlive\n      if (isLaunchdManaged()) {\n        // Brief poll so we can report the new PID\n        for (let i = 0; i < 6; i++) {\n          await sleep(500);\n          const respawnedPid = readPid();\n          if (respawnedPid) {\n            console.log(`[sisyphus] Daemon restarted (pid ${respawnedPid}) by process manager`);\n            process.exit(0);\n          }\n        }\n        console.log('[sisyphus] Daemon will be restarted by process manager');\n        process.exit(0);\n      }\n      // No process manager — start in-process\n      await startDaemon();\n      break;\n    }\n\n    case 'start':\n    case undefined:\n      await startDaemon();\n      break;\n\n    case 'help':\n    case '--help':\n    case '-h':\n      console.log('Usage: sisyphusd [command]');\n      console.log('');\n      console.log('Commands:');\n      console.log('  start     Start the daemon (default if no command given)');\n      console.log('  stop      Stop the running daemon');\n      console.log('  restart   Stop and restart the daemon');\n      console.log('  help      Show this help message');\n      break;\n\n    default:\n      console.error(`[sisyphus] Unknown command: ${command}`);\n      console.error('Usage: sisyphusd [start|stop|restart|help]');\n      process.exit(1);\n  }\n})().catch((err) => {\n  console.error('[sisyphus] Fatal error:', err);\n  process.exit(1);\n});\n","import { readFileSync } from 'node:fs';\nimport { globalConfigPath, projectConfigPath } from './paths.js';\n\nexport interface WorktreeConfig {\n  copy?: string[];\n  clone?: string[];\n  symlink?: string[];\n  init?: string;\n}\n\nexport interface Config {\n  model?: string;\n  tmuxSession?: string;\n  orchestratorPrompt?: string;\n  pollIntervalMs?: number;\n  autoUpdate?: boolean;\n}\n\nconst DEFAULT_CONFIG: Config = {\n  pollIntervalMs: 5000,\n};\n\nfunction readJsonFile(filePath: string): Partial<Config> {\n  try {\n    const content = readFileSync(filePath, 'utf-8');\n    return JSON.parse(content) as Partial<Config>;\n  } catch {\n    return {};\n  }\n}\n\nexport function loadConfig(cwd: string): Config {\n  const global = readJsonFile(globalConfigPath());\n  const project = readJsonFile(projectConfigPath(cwd));\n  return { ...DEFAULT_CONFIG, ...global, ...project };\n}\n","import { createServer, type Server } from 'node:net';\nimport { unlinkSync, existsSync, writeFileSync, readFileSync, mkdirSync } from 'node:fs';\nimport { socketPath, globalDir } from '../shared/paths.js';\nimport { join } from 'node:path';\nimport type { Request, Response } from '../shared/protocol.js';\nimport * as sessionManager from './session-manager.js';\nimport { lookupPane, unregisterPane } from './pane-registry.js';\n\nlet server: Server | null = null;\n\n// Track the cwd for each session so we can route requests\nconst sessionCwdMap = new Map<string, string>();\n// Track the originating tmux session for each sisyphus session\nconst sessionTmuxMap = new Map<string, string>();\n// Track the originating tmux window for each sisyphus session\nconst sessionWindowMap = new Map<string, string>();\n\nexport function getSessionCwd(sessionId: string): string | undefined {\n  return sessionCwdMap.get(sessionId);\n}\n\nexport function getSessionTmux(sessionId: string): string | undefined {\n  return sessionTmuxMap.get(sessionId);\n}\n\nfunction registryPath(): string {\n  return join(globalDir(), 'session-registry.json');\n}\n\nfunction persistSessionRegistry(): void {\n  const dir = globalDir();\n  mkdirSync(dir, { recursive: true });\n  const registry: Record<string, string> = {};\n  for (const [id, cwd] of sessionCwdMap) {\n    registry[id] = cwd;\n  }\n  writeFileSync(registryPath(), JSON.stringify(registry, null, 2), 'utf-8');\n}\n\nexport function loadSessionRegistry(): Record<string, string> {\n  const p = registryPath();\n  if (!existsSync(p)) return {};\n  try {\n    return JSON.parse(readFileSync(p, 'utf-8')) as Record<string, string>;\n  } catch {\n    return {};\n  }\n}\n\nexport function registerSessionCwd(sessionId: string, cwd: string): void {\n  sessionCwdMap.set(sessionId, cwd);\n  persistSessionRegistry();\n}\n\nexport function registerSessionTmux(sessionId: string, tmuxSession: string, windowId: string): void {\n  sessionTmuxMap.set(sessionId, tmuxSession);\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nasync function handleRequest(req: Request): Promise<Response> {\n  try {\n    switch (req.type) {\n      case 'start': {\n        const session = await sessionManager.startSession(req.task, req.cwd, req.tmuxSession, req.tmuxWindow);\n        registerSessionCwd(session.id, req.cwd);\n        sessionTmuxMap.set(session.id, req.tmuxSession);\n        sessionWindowMap.set(session.id, req.tmuxWindow);\n        return { ok: true, data: { sessionId: session.id } };\n      }\n\n      case 'spawn': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = await sessionManager.handleSpawn(req.sessionId, cwd, req.agentType, req.name, req.instruction, req.worktree);\n        return { ok: true, data: { agentId: result.agentId } };\n      }\n\n      case 'submit': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const windowId = sessionWindowMap.get(req.sessionId);\n        if (!windowId) return { ok: false, error: `No tmux window found for session: ${req.sessionId}` };\n        await sessionManager.handleSubmit(cwd, req.sessionId, req.agentId, req.report, windowId);\n        return { ok: true };\n      }\n\n      case 'report': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleReport(cwd, req.sessionId, req.agentId, req.content);\n        return { ok: true };\n      }\n\n      case 'yield': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleYield(req.sessionId, cwd, req.nextPrompt);\n        return { ok: true };\n      }\n\n      case 'complete': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleComplete(req.sessionId, cwd, req.report);\n        return { ok: true };\n      }\n\n      case 'status': {\n        if (req.sessionId) {\n          const cwd = sessionCwdMap.get(req.sessionId);\n          if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n          const session = sessionManager.getSessionStatus(cwd, req.sessionId);\n          return { ok: true, data: { session: session as unknown as Record<string, unknown> } };\n        }\n        return { ok: true, data: { message: 'daemon running' } };\n      }\n\n      case 'list': {\n        const allSessions: Array<Record<string, unknown>> = [];\n        if (req.all) {\n          // List sessions across all known cwds\n          const seenCwds = new Set<string>();\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            const sessions = sessionManager.listSessions(cwd);\n            allSessions.push(...sessions.map(s => ({ ...s, cwd } as unknown as Record<string, unknown>)));\n          }\n        } else {\n          // List sessions for the requesting cwd only\n          const sessions = sessionManager.listSessions(req.cwd);\n          allSessions.push(...sessions.map(s => ({ ...s, cwd: req.cwd } as unknown as Record<string, unknown>)));\n          // Count total across all cwds for the hint\n          let totalCount = allSessions.length;\n          const seenCwds = new Set<string>([req.cwd]);\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            totalCount += sessionManager.listSessions(cwd).length;\n          }\n          if (totalCount > allSessions.length) {\n            return { ok: true, data: { sessions: allSessions, totalCount, filtered: true } };\n          }\n        }\n        return { ok: true, data: { sessions: allSessions } };\n      }\n\n      case 'resume': {\n        let cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) {\n          // Session not in memory — try to recover from disk using the cwd provided by CLI\n          const stateFile = `${req.cwd}/.sisyphus/sessions/${req.sessionId}/state.json`;\n          if (existsSync(stateFile)) {\n            cwd = req.cwd;\n            registerSessionCwd(req.sessionId, cwd);\n          } else {\n            return { ok: false, error: `Unknown session: ${req.sessionId}. No state.json found at ${stateFile}` };\n          }\n        }\n        sessionTmuxMap.set(req.sessionId, req.tmuxSession);\n        sessionWindowMap.set(req.sessionId, req.tmuxWindow);\n        const session = await sessionManager.resumeSession(req.sessionId, cwd, req.tmuxSession, req.tmuxWindow, req.message);\n        return { ok: true, data: { sessionId: session.id, status: session.status } };\n      }\n\n      case 'register_claude_session': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleRegisterClaudeSession(cwd, req.sessionId, req.agentId, req.claudeSessionId);\n        return { ok: true };\n      }\n\n      case 'kill': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const killedAgents = await sessionManager.handleKill(req.sessionId, cwd);\n        sessionCwdMap.delete(req.sessionId);\n        sessionTmuxMap.delete(req.sessionId);\n        sessionWindowMap.delete(req.sessionId);\n        persistSessionRegistry();\n        return { ok: true, data: { killedAgents, sessionId: req.sessionId } };\n      }\n\n      case 'pane-exited': {\n        const entry = lookupPane(req.paneId);\n        if (!entry) return { ok: true }; // Already handled or unknown\n        const cwd = sessionCwdMap.get(entry.sessionId);\n        if (!cwd) {\n          unregisterPane(req.paneId);\n          return { ok: true };\n        }\n        unregisterPane(req.paneId);\n        await sessionManager.handlePaneExited(req.paneId, cwd, entry.sessionId, entry.role, entry.agentId);\n        return { ok: true };\n      }\n\n      default:\n        return { ok: false, error: `Unknown request type: ${(req as Record<string, unknown>).type}` };\n    }\n  } catch (err) {\n    const message = err instanceof Error ? err.message : String(err);\n    return { ok: false, error: message };\n  }\n}\n\nexport function startServer(): Promise<Server> {\n  return new Promise((resolve, reject) => {\n    const sock = socketPath();\n\n    if (existsSync(sock)) {\n      unlinkSync(sock);\n    }\n\n    server = createServer((conn) => {\n      let buffer = '';\n\n      conn.on('data', (chunk) => {\n        buffer += chunk.toString();\n        const lines = buffer.split('\\n');\n        buffer = lines.pop()!;\n\n        for (const line of lines) {\n          if (!line.trim()) continue;\n          let req: Request;\n          try {\n            req = JSON.parse(line) as Request;\n          } catch {\n            conn.write(JSON.stringify({ ok: false, error: 'Invalid JSON' }) + '\\n');\n            continue;\n          }\n\n          handleRequest(req).then((res) => {\n            conn.write(JSON.stringify(res) + '\\n');\n          });\n        }\n      });\n\n      conn.on('error', (err) => {\n        console.error('[sisyphus] Connection error:', err.message);\n      });\n    });\n\n    server.on('error', reject);\n\n    server.listen(sock, () => {\n      console.log(`[sisyphus] Daemon listening on ${sock}`);\n      resolve(server!);\n    });\n  });\n}\n\nexport function stopServer(): Promise<void> {\n  return new Promise((resolve) => {\n    if (!server) {\n      resolve();\n      return;\n    }\n    server.close(() => {\n      const sock = socketPath();\n      if (existsSync(sock)) {\n        unlinkSync(sock);\n      }\n      server = null;\n      resolve();\n    });\n  });\n}\n","import { v4 as uuidv4 } from 'uuid';\nimport { existsSync, readdirSync, rmSync } from 'node:fs';\nimport * as state from './state.js';\nimport * as orchestrator from './orchestrator.js';\nimport * as tmux from './tmux.js';\nimport { spawnAgent, resetAgentCounterFromState, clearAgentCounter, handleAgentSubmit, handleAgentReport, handleAgentKilled } from './agent.js';\nimport { trackSession, untrackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { resetColors } from './colors.js';\nimport { sessionDir, sessionsDir } from '../shared/paths.js';\nimport { unregisterSessionPanes } from './pane-registry.js';\nimport type { Session } from '../shared/types.js';\nimport { mergeWorktrees, cleanupWorktree } from './worktree.js';\n\nexport async function startSession(task: string, cwd: string, tmuxSession: string, windowId: string): Promise<Session> {\n  const sessionId = uuidv4();\n  const session = state.createSession(sessionId, task, cwd);\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId);\n  updateTrackedWindow(sessionId, windowId);\n\n  pruneOldSessions(cwd);\n\n  return session;\n}\n\nconst PRUNE_KEEP_COUNT = 10;\nconst PRUNE_KEEP_DAYS = 7;\n\nfunction pruneOldSessions(cwd: string): void {\n  try {\n    const dir = sessionsDir(cwd);\n    if (!existsSync(dir)) return;\n\n    const entries = readdirSync(dir, { withFileTypes: true });\n    const candidates: Array<{ id: string; createdAt: number }> = [];\n\n    for (const entry of entries) {\n      if (!entry.isDirectory()) continue;\n      try {\n        const session = state.getSession(cwd, entry.name);\n        if (session.status === 'active' || session.status === 'paused') continue;\n        candidates.push({ id: session.id, createdAt: new Date(session.createdAt).getTime() });\n      } catch {\n        // Unreadable session dir — skip, don't delete\n      }\n    }\n\n    if (candidates.length <= PRUNE_KEEP_COUNT) return;\n\n    candidates.sort((a, b) => b.createdAt - a.createdAt);\n\n    const cutoff = Date.now() - PRUNE_KEEP_DAYS * 24 * 60 * 60 * 1000;\n    const keep = new Set<string>();\n\n    for (let i = 0; i < Math.min(PRUNE_KEEP_COUNT, candidates.length); i++) {\n      keep.add(candidates[i]!.id);\n    }\n    for (const c of candidates) {\n      if (c.createdAt >= cutoff) keep.add(c.id);\n    }\n\n    for (const c of candidates) {\n      if (keep.has(c.id)) continue;\n      rmSync(sessionDir(cwd, c.id), { recursive: true, force: true });\n    }\n  } catch (err) {\n    console.error('[sisyphus] Session pruning failed:', err);\n  }\n}\n\nexport async function resumeSession(sessionId: string, cwd: string, tmuxSession: string, windowId: string, message?: string): Promise<Session> {\n  const session = state.getSession(cwd, sessionId);\n\n  if (session.status !== 'active') {\n    // Determine which agents still have live panes\n    const livePaneIds = new Set<string>();\n    if (session.tmuxWindowId) {\n      const panes = tmux.listPanes(session.tmuxWindowId);\n      for (const pane of panes) {\n        livePaneIds.add(pane.paneId);\n      }\n    }\n\n    // Mark running agents as \"lost\" only if their pane is gone (or no window ID to check)\n    for (const agent of session.agents) {\n      if (agent.status === 'running') {\n        const isAlive = agent.paneId != null && livePaneIds.has(agent.paneId);\n        if (!isAlive) {\n          await state.updateAgent(cwd, sessionId, agent.id, {\n            status: 'lost',\n            completedAt: new Date().toISOString(),\n            killedReason: 'session resumed — agent was still running',\n          });\n        }\n      }\n    }\n  }\n\n  await state.updateSessionStatus(cwd, sessionId, 'active');\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  // Reset counters based on existing agents\n  resetAgentCounterFromState(sessionId, session.agents);\n  resetColors(sessionId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId, message);\n  updateTrackedWindow(sessionId, windowId);\n\n  return state.getSession(cwd, sessionId);\n}\n\nexport function getSessionStatus(cwd: string, sessionId: string): Session {\n  return state.getSession(cwd, sessionId);\n}\n\nexport function listSessions(cwd: string): Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> {\n  const dir = sessionsDir(cwd);\n  if (!existsSync(dir)) return [];\n\n  const entries = readdirSync(dir, { withFileTypes: true });\n  const sessions: Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> = [];\n\n  for (const entry of entries) {\n    if (!entry.isDirectory()) continue;\n    try {\n      const session = state.getSession(cwd, entry.name);\n      sessions.push({\n        id: session.id,\n        task: session.task,\n        status: session.status,\n        createdAt: session.createdAt,\n        agentCount: session.agents.length,\n      });\n    } catch (err) {\n      console.error(`[sisyphus] Failed to read session ${entry.name}:`, err);\n    }\n  }\n\n  return sessions;\n}\n\nconst pendingRespawns = new Set<string>();\n\nexport function onAllAgentsDone(sessionId: string, cwd: string, windowId: string): void {\n  if (pendingRespawns.has(sessionId)) return;\n\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  pendingRespawns.add(sessionId);\n\n  // Merge any worktree agents before respawning orchestrator\n  const worktreeAgents = session.agents.filter(a => a.worktreePath && a.mergeStatus === 'pending');\n  if (worktreeAgents.length > 0) {\n    const results = mergeWorktrees(cwd, worktreeAgents);\n    for (const result of results) {\n      const mergeStatus = result.status as 'merged' | 'no-changes' | 'conflict';\n      state.updateAgent(cwd, sessionId, result.agentId, {\n        mergeStatus,\n        mergeDetails: result.conflictDetails,\n      }).catch((err: unknown) => console.error(`[sisyphus] Failed to update merge status for ${result.agentId}:`, err));\n    }\n  }\n\n  // Respawn on next tick — agents already finished, no delay needed\n  setImmediate(() => {\n    pendingRespawns.delete(sessionId);\n    orchestrator.spawnOrchestrator(sessionId, cwd, windowId)\n      .then(() => updateTrackedWindow(sessionId, windowId))\n      .catch((err: unknown) => console.error(`[sisyphus] Failed to respawn orchestrator for session ${sessionId}:`, err));\n  });\n}\n\nexport async function handleSpawn(\n  sessionId: string,\n  cwd: string,\n  agentType: string,\n  name: string,\n  instruction: string,\n  worktree?: boolean,\n): Promise<{ agentId: string }> {\n  const windowId = orchestrator.getWindowId(sessionId);\n  if (!windowId) throw new Error(`No tmux window found for session ${sessionId}`);\n\n  const agent = await spawnAgent({\n    sessionId,\n    cwd,\n    agentType,\n    name,\n    instruction,\n    windowId,\n    worktree,\n  });\n\n  await state.appendAgentToLastCycle(cwd, sessionId, agent.id);\n\n  return { agentId: agent.id };\n}\n\nexport async function handleSubmit(cwd: string, sessionId: string, agentId: string, report: string, windowId: string): Promise<void> {\n  const allDone = await handleAgentSubmit(cwd, sessionId, agentId, report);\n  if (allDone) {\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n\nexport async function handleReport(cwd: string, sessionId: string, agentId: string, content: string): Promise<void> {\n  await handleAgentReport(cwd, sessionId, agentId, content);\n}\n\nexport async function handleYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  // Re-activate paused sessions so respawn can proceed\n  const pre = state.getSession(cwd, sessionId);\n  if (pre.status === 'paused') {\n    await state.updateSessionStatus(cwd, sessionId, 'active');\n  }\n\n  await orchestrator.handleOrchestratorYield(sessionId, cwd, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const hasRunningAgents = session.agents.some(a => a.status === 'running');\n  if (!hasRunningAgents) {\n    const windowId = orchestrator.getWindowId(sessionId);\n    if (windowId) {\n      onAllAgentsDone(sessionId, cwd, windowId);\n    }\n  }\n}\n\nexport async function handleComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await orchestrator.handleOrchestratorComplete(sessionId, cwd, report);\n}\n\nexport async function handleRegisterClaudeSession(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  claudeSessionId: string,\n): Promise<void> {\n  await state.updateAgent(cwd, sessionId, agentId, { claudeSessionId });\n}\n\nexport async function handleKill(sessionId: string, cwd: string): Promise<number> {\n  const session = state.getSession(cwd, sessionId);\n  const windowId = orchestrator.getWindowId(sessionId);\n\n  // Kill all running agents\n  let killedAgents = 0;\n  for (const agent of session.agents) {\n    if (agent.status === 'running') {\n      await state.updateAgent(cwd, sessionId, agent.id, {\n        status: 'killed',\n        killedReason: 'session killed by user',\n        completedAt: new Date().toISOString(),\n      });\n      killedAgents++;\n    }\n  }\n\n  // Clean up worktrees for agents that had them\n  for (const agent of session.agents) {\n    if (agent.worktreePath && agent.branchName) {\n      cleanupWorktree(cwd, agent.worktreePath, agent.branchName);\n    }\n  }\n\n  // Kill the orchestrator pane if it exists\n  const orchPaneId = orchestrator.getOrchestratorPaneId(sessionId);\n  if (orchPaneId) {\n    tmux.killPane(orchPaneId);\n  }\n\n  // Mark session as completed\n  await state.updateSessionStatus(cwd, sessionId, 'completed');\n\n  // Untrack from pane monitor and pane registry\n  untrackSession(sessionId);\n  unregisterSessionPanes(sessionId);\n\n  // Kill the entire tmux window\n  if (windowId) {\n    tmux.killWindow(windowId);\n  }\n\n  // Clean up agent counter\n  clearAgentCounter(sessionId);\n\n  return killedAgents;\n}\n\nexport async function handlePaneExited(\n  paneId: string,\n  cwd: string,\n  sessionId: string,\n  role: 'orchestrator' | 'agent',\n  agentId?: string,\n): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  if (role === 'agent' && agentId) {\n    const agent = session.agents.find(a => a.id === agentId);\n    if (!agent || agent.status !== 'running') return;\n\n    const allDone = await handleAgentKilled(cwd, sessionId, agentId, 'pane exited');\n    if (allDone) {\n      const windowId = orchestrator.getWindowId(sessionId);\n      if (windowId) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  } else if (role === 'orchestrator') {\n    // Orchestrator pane exited unexpectedly (crash, context exhaustion, /exit)\n    const hasRunningAgents = session.agents.some(a => a.status === 'running');\n    if (!hasRunningAgents && session.agents.length > 0) {\n      const windowId = orchestrator.getWindowId(sessionId);\n      if (windowId) {\n        console.log(`[sisyphus] Orchestrator pane exited for session ${sessionId}, all agents done — triggering respawn`);\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    } else if (!hasRunningAgents) {\n      // No agents at all — pause session\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane exited with no agents`);\n    }\n  }\n}\n","import { randomUUID } from 'node:crypto';\nimport { mkdirSync, readFileSync, renameSync, writeFileSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport { contextDir, logsPath, planPath, promptsDir, sessionDir, statePath } from '../shared/paths.js';\nimport type { Agent, AgentReport, OrchestratorCycle, Session, SessionStatus } from '../shared/types.js';\n\nconst PLAN_SEED = `---\ndescription: >\n  Living document of what still needs to happen. Write out ne\n---\n`;\n\nconst LOGS_SEED = `---\ndescription: >\n  Session memory. Record important observations, decisions, and findings here.\n  This is your persistent memory across cycles: things you tried, what\n  worked/failed, design decisions and their rationale, gotchas discovered during\n  implementation.\n---\n`;\n\n// Per-session mutex to prevent read-modify-write races\nconst sessionLocks = new Map<string, Promise<void>>();\n\nasync function withSessionLock<T>(sessionId: string, fn: () => T): Promise<T> {\n  const prev = sessionLocks.get(sessionId) ?? Promise.resolve();\n  let resolve: () => void;\n  const next = new Promise<void>(r => { resolve = r; });\n  sessionLocks.set(sessionId, next);\n  await prev;\n  try {\n    return fn();\n  } finally {\n    resolve!();\n  }\n}\n\nfunction atomicWrite(filePath: string, data: string): void {\n  const dir = dirname(filePath);\n  const tmpPath = join(dir, `.state.${randomUUID()}.tmp`);\n  writeFileSync(tmpPath, data, 'utf-8');\n  renameSync(tmpPath, filePath);\n}\n\nexport function createSession(id: string, task: string, cwd: string): Session {\n  const dir = sessionDir(cwd, id);\n  mkdirSync(dir, { recursive: true });\n  mkdirSync(contextDir(cwd, id), { recursive: true });\n  mkdirSync(promptsDir(cwd, id), { recursive: true });\n\n  writeFileSync(planPath(cwd, id), PLAN_SEED, 'utf-8');\n  writeFileSync(logsPath(cwd, id), LOGS_SEED, 'utf-8');\n\n  const session: Session = {\n    id,\n    task,\n    cwd,\n    status: 'active',\n    createdAt: new Date().toISOString(),\n    agents: [],\n    orchestratorCycles: [],\n  };\n\n  atomicWrite(statePath(cwd, id), JSON.stringify(session, null, 2));\n  return session;\n}\n\nexport function getSession(cwd: string, sessionId: string): Session {\n  const content = readFileSync(statePath(cwd, sessionId), 'utf-8');\n  return JSON.parse(content) as Session;\n}\n\nfunction saveSession(session: Session): void {\n  atomicWrite(statePath(session.cwd, session.id), JSON.stringify(session, null, 2));\n}\n\nexport async function addAgent(cwd: string, sessionId: string, agent: Agent): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.agents.push(agent);\n    saveSession(session);\n  });\n}\n\nexport async function updateAgent(cwd: string, sessionId: string, agentId: string, updates: Partial<Agent>): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    Object.assign(agent, updates);\n    saveSession(session);\n  });\n}\n\nexport async function addOrchestratorCycle(cwd: string, sessionId: string, cycle: OrchestratorCycle): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.orchestratorCycles.push(cycle);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionStatus(cwd: string, sessionId: string, status: SessionStatus, completionReport?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = status;\n    if (completionReport !== undefined) {\n      session.completionReport = completionReport;\n    }\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentToLastCycle(cwd: string, sessionId: string, agentId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    cycles[cycles.length - 1]!.agentsSpawned.push(agentId);\n    saveSession(session);\n  });\n}\n\nexport async function completeSession(cwd: string, sessionId: string, report: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = 'completed';\n    session.completedAt = new Date().toISOString();\n    session.completionReport = report;\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentReport(cwd: string, sessionId: string, agentId: string, entry: AgentReport): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    agent.reports.push(entry);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionTmux(cwd: string, sessionId: string, tmuxSessionName: string, tmuxWindowId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.tmuxSessionName = tmuxSessionName;\n    session.tmuxWindowId = tmuxWindowId;\n    saveSession(session);\n  });\n}\n\nexport async function completeOrchestratorCycle(cwd: string, sessionId: string, nextPrompt?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    const cycle = cycles[cycles.length - 1]!;\n    cycle.completedAt = new Date().toISOString();\n    if (nextPrompt) cycle.nextPrompt = nextPrompt;\n    saveSession(session);\n  });\n}\n","import { existsSync, readdirSync, readFileSync, writeFileSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport { contextDir, logsPath, planPath, projectOrchestratorPromptPath, promptsDir, worktreeConfigPath } from '../shared/paths.js';\nimport type { Agent, Session } from '../shared/types.js';\nimport { ORCHESTRATOR_COLOR } from './colors.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { registerPane, unregisterPane, unregisterSessionPanes } from './pane-registry.js';\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nconst sessionWindowMap = new Map<string, string>();\nconst sessionOrchestratorPane = new Map<string, string>();\n\nexport function getWindowId(sessionId: string): string | undefined {\n  return sessionWindowMap.get(sessionId);\n}\n\nexport function setWindowId(sessionId: string, windowId: string): void {\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nexport function getOrchestratorPaneId(sessionId: string): string | undefined {\n  return sessionOrchestratorPane.get(sessionId);\n}\n\nexport function setOrchestratorPaneId(sessionId: string, paneId: string): void {\n  sessionOrchestratorPane.set(sessionId, paneId);\n}\n\nfunction loadOrchestratorPrompt(cwd: string): string {\n  const projectPath = projectOrchestratorPromptPath(cwd);\n  if (existsSync(projectPath)) {\n    return readFileSync(projectPath, 'utf-8');\n  }\n  const bundledPath = resolve(import.meta.dirname, '../templates/orchestrator.md');\n  return readFileSync(bundledPath, 'utf-8');\n}\n\nfunction formatStateForOrchestrator(session: Session): string {\n  const shortId = session.id.slice(0, 8);\n  const cycleNum = session.orchestratorCycles.length;\n\n  const ctxDir = contextDir(session.cwd, session.id);\n  let contextLines: string;\n  if (existsSync(ctxDir)) {\n    const files = readdirSync(ctxDir);\n    contextLines = files.length > 0 ? files.map(f => `- ${f}`).join('\\n') : '  (none)';\n  } else {\n    contextLines = '  (none)';\n  }\n\n  const planFile = planPath(session.cwd, session.id);\n  const planRef = existsSync(planFile) ? `@${planFile}` : '(empty)';\n\n  const logsFile = logsPath(session.cwd, session.id);\n  const logsRef = existsSync(logsFile) ? `@${logsFile}` : '(empty)';\n\n  const agentLines = session.agents.length > 0\n    ? session.agents.map((a: Agent) => {\n        const header = `- ${a.id} (${a.name}): ${a.status} — ${a.reports.length} report(s)`;\n        if (a.reports.length === 0) return header;\n        let updateNum = 0;\n        const reportLines = a.reports.map(r => {\n          const label = r.type === 'final' ? '[final]' : `[update ${String(++updateNum).padStart(3, '0')}]`;\n          return `  ${label} \"${r.summary}\" → ${r.filePath}`;\n        });\n        return [header, ...reportLines].join('\\n');\n      }).join('\\n')\n    : '  (none)';\n\n  const cycleLines = session.orchestratorCycles.length > 0\n    ? session.orchestratorCycles.map(c => {\n        const spawnedList = c.agentsSpawned.length > 0 ? c.agentsSpawned.join(', ') : '(none)';\n        return `Cycle ${c.cycle}: Spawned ${spawnedList}`;\n      }).join('\\n')\n    : '  (none)';\n\n  // Worktree status — only if any agents have worktree info\n  const worktreeAgents = session.agents.filter(a => a.worktreePath);\n  let worktreeSection = '';\n  if (worktreeAgents.length > 0) {\n    const wtLines = worktreeAgents.map((a: Agent) => {\n      if (a.mergeStatus === 'conflict') {\n        return `- ${a.id}: CONFLICT — ${a.mergeDetails ?? 'unknown'}\\n  Branch: ${a.branchName}\\n  Worktree: ${a.worktreePath}`;\n      }\n      if (a.mergeStatus === 'no-changes') {\n        return `- ${a.id}: NO CHANGES — agent did not commit any work to branch ${a.branchName}`;\n      }\n      const status = a.mergeStatus ?? 'pending';\n      return `- ${a.id}: ${status} (branch ${a.branchName})`;\n    }).join('\\n');\n    worktreeSection = `\\n\\n## Worktrees\\n${wtLines}`;\n  }\n\n  // Worktree hint\n  const worktreeHint = existsSync(worktreeConfigPath(session.cwd))\n    ? 'Worktree config active (`.sisyphus/worktree.json`). Use `--worktree` flag with `sisyphus spawn` to isolate agents in their own worktrees. Recommended for feature work, especially with potential file overlap.'\n    : 'No worktree configuration found. If this session involves parallel work where agents may edit overlapping files, use the `git-management` skill to set up `.sisyphus/worktree.json` and enable worktree isolation.';\n\n  return `<state>\nsession: ${shortId} (cycle ${cycleNum})\ntask: ${session.task}\nstatus: ${session.status}\n\n## Plan\n${planRef}\n\n## Logs\n${logsRef}\n\n## Agents\n${agentLines}${worktreeSection}\n\n## Previous Cycles\n${cycleLines}\n\n## Context Files\n${contextLines}\n\n## Git Worktrees\n${worktreeHint}\n</state>`;\n}\n\nexport async function spawnOrchestrator(sessionId: string, cwd: string, windowId: string, message?: string): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  const basePrompt = loadOrchestratorPrompt(cwd);\n  const formattedState = formatStateForOrchestrator(session);\n\n  // System prompt: template only (no state)\n  const cycleNum = session.orchestratorCycles.length + 1;\n  const promptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-system-${cycleNum}.md`;\n  writeFileSync(promptFilePath, basePrompt, 'utf-8');\n\n  sessionWindowMap.set(sessionId, windowId);\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='orchestrator'`,\n  ].join(' && ');\n\n  // User message: state block + contextual prompt\n  let userPrompt: string;\n  if (message) {\n    userPrompt = `${formattedState}\\n\\nThe user resumed this session with new instructions: ${message}`;\n  } else {\n    // Check last completed cycle for a stored nextPrompt\n    const lastCycle = [...session.orchestratorCycles].reverse().find(c => c.completedAt);\n    const storedPrompt = lastCycle?.nextPrompt;\n    if (storedPrompt) {\n      userPrompt = `${formattedState}\\n\\n${storedPrompt}`;\n    } else {\n      userPrompt = `${formattedState}\\n\\nReview the current session and delegate the next cycle of work.`;\n    }\n  }\n\n  const userPromptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-user-${cycleNum}.md`;\n  writeFileSync(userPromptFilePath, userPrompt, 'utf-8');\n  const pluginPath = resolve(import.meta.dirname, '../templates/orchestrator-plugin');\n  const settingsPath = resolve(import.meta.dirname, '../templates/orchestrator-settings.json');\n  const claudeCmd = `claude --dangerously-skip-permissions --settings \"${settingsPath}\" --plugin-dir \"${pluginPath}\" --append-system-prompt \"$(cat '${promptFilePath}')\" \"$(cat '${userPromptFilePath}')\"`;\n\n  const paneId = tmux.createPane(windowId, cwd);\n\n  sessionOrchestratorPane.set(sessionId, paneId);\n  registerPane(paneId, sessionId, 'orchestrator');\n  tmux.setPaneTitle(paneId, `orchestrator (${sessionId.slice(0, 8)})`);\n  tmux.setPaneStyle(paneId, ORCHESTRATOR_COLOR);\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n  const notifyCmd = `sisyphus notify pane-exited --pane-id ${paneId}`;\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}; ${notifyCmd}`);\n\n  await state.addOrchestratorCycle(cwd, sessionId, {\n    cycle: cycleNum,\n    timestamp: new Date().toISOString(),\n    agentsSpawned: [],\n    paneId,\n  });\n}\n\nfunction resolveOrchestratorPane(sessionId: string, cwd: string): string | undefined {\n  const memPane = sessionOrchestratorPane.get(sessionId);\n  if (memPane) return memPane;\n  const session = state.getSession(cwd, sessionId);\n  const lastCycle = session.orchestratorCycles[session.orchestratorCycles.length - 1];\n  return lastCycle?.paneId ?? undefined;\n}\n\nexport async function handleOrchestratorYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  const paneId = resolveOrchestratorPane(sessionId, cwd);\n  if (paneId) {\n    tmux.killPane(paneId);\n    unregisterPane(paneId);\n    sessionOrchestratorPane.delete(sessionId);\n  }\n\n  const windowId = sessionWindowMap.get(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  await state.completeOrchestratorCycle(cwd, sessionId, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const runningAgents = session.agents.filter(a => a.status === 'running');\n  if (runningAgents.length === 0) {\n    console.log(`[sisyphus] Orchestrator yielded with no running agents for session ${sessionId}`);\n  }\n}\n\nexport async function handleOrchestratorComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await state.completeOrchestratorCycle(cwd, sessionId);\n  await state.completeSession(cwd, sessionId, report);\n\n  console.log(`[sisyphus] Session ${sessionId} completed: ${report}`);\n}\n\nexport function cleanupSessionMaps(sessionId: string): void {\n  sessionOrchestratorPane.delete(sessionId);\n  sessionWindowMap.delete(sessionId);\n  unregisterSessionPanes(sessionId);\n}\n","import { readFileSync } from 'node:fs';\nimport { homedir } from 'node:os';\nimport { join } from 'node:path';\n\nexport const ORCHESTRATOR_COLOR = 'yellow';\n\nconst AGENT_PALETTE = ['blue', 'green', 'magenta', 'cyan', 'red', 'white'] as const;\n\nconst TMUX_COLOR_MAP: Record<string, string> = {\n  orange: 'colour208',\n  teal: 'colour6',\n};\n\nfunction normalizeTmuxColor(color: string): string {\n  return TMUX_COLOR_MAP[color] ?? color;\n}\n\nconst sessionColorIndex = new Map<string, number>();\n\nexport function getNextColor(sessionId: string): string {\n  const idx = sessionColorIndex.get(sessionId) ?? 0;\n  const color = AGENT_PALETTE[idx % AGENT_PALETTE.length]!;\n  sessionColorIndex.set(sessionId, idx + 1);\n  return color;\n}\n\nexport function resetColors(sessionId: string): void {\n  sessionColorIndex.delete(sessionId);\n}\n\nfunction extractFrontmatterColor(content: string): string | null {\n  const match = content.match(/^---\\n([\\s\\S]*?)\\n---/);\n  if (!match) return null;\n  const colorMatch = match[1]!.match(/^color:\\s*(.+)$/m);\n  return colorMatch ? colorMatch[1]!.trim() : null;\n}\n\nfunction findPluginInstallPath(namespace: string): string | null {\n  try {\n    const registryPath = join(homedir(), '.claude', 'plugins', 'installed_plugins.json');\n    const registry = JSON.parse(readFileSync(registryPath, 'utf-8'));\n    for (const key of Object.keys(registry)) {\n      if (key.startsWith(`${namespace}@`)) {\n        return registry[key].installPath ?? null;\n      }\n    }\n  } catch {\n    // File missing, parse error, or no match\n  }\n  return null;\n}\n\nexport function resolveAgentTypeColor(agentType: string, pluginDir: string, cwd: string): string | null {\n  if (!agentType) return null;\n\n  let namespace: string | undefined;\n  let name: string;\n\n  if (agentType.includes(':')) {\n    [namespace, name] = agentType.split(':', 2) as [string, string];\n  } else {\n    name = agentType;\n  }\n\n  const searchPaths: string[] = [];\n\n  if (namespace) {\n    // Bundled (handles sisyphus:* via pluginDir)\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n    // Installed plugin\n    const installPath = findPluginInstallPath(namespace);\n    if (installPath) {\n      searchPaths.push(join(installPath, 'agents', `${name}.md`));\n    }\n  } else {\n    // Project-local\n    searchPaths.push(join(cwd, '.claude', 'agents', `${name}.md`));\n    // User-global\n    searchPaths.push(join(homedir(), '.claude', 'agents', `${name}.md`));\n    // Bundled\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n  }\n\n  for (const path of searchPaths) {\n    try {\n      const content = readFileSync(path, 'utf-8');\n      const color = extractFrontmatterColor(content);\n      if (color) return normalizeTmuxColor(color);\n    } catch {\n      // File doesn't exist, try next\n    }\n  }\n\n  return null;\n}\n","import { execSync } from 'node:child_process';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV }).trim();\n}\n\nfunction execSafe(cmd: string): string | null {\n  try {\n    return exec(cmd);\n  } catch {\n    return null;\n  }\n}\n\nexport function getCurrentTmuxSession(): string {\n  const tmuxEnv = process.env['TMUX'];\n  if (!tmuxEnv) throw new Error('Not running inside tmux');\n  return exec('tmux display-message -p \"#{session_name}\"');\n}\n\nexport function createWindow(sessionName: string, windowName: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  exec(`tmux new-window -t \"${sessionName}\" -n \"${windowName}\"${cwdFlag} -P -F \"#{window_id}\"`);\n  return exec(`tmux display-message -t \"${sessionName}:${windowName}\" -p \"#{window_id}\"`);\n}\n\nexport function createPane(windowTarget: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  const paneId = exec(`tmux split-window -h -t \"${windowTarget}\"${cwdFlag} -P -F \"#{pane_id}\"`);\n  execSafe(`tmux select-layout -t \"${windowTarget}\" even-horizontal`);\n  return paneId;\n}\n\nexport function sendKeys(paneTarget: string, command: string): void {\n  exec(`tmux send-keys -t \"${paneTarget}\" ${shellQuote(command)} Enter`);\n}\n\nexport function killPane(paneTarget: string): void {\n  execSafe(`tmux kill-pane -t \"${paneTarget}\"`);\n}\n\nexport function killWindow(windowTarget: string): void {\n  execSafe(`tmux kill-window -t \"${windowTarget}\"`);\n}\n\nexport interface PaneInfo {\n  paneId: string;\n  panePid: string;\n}\n\nexport function listPanes(windowTarget: string): PaneInfo[] {\n  const output = execSafe(`tmux list-panes -t \"${windowTarget}\" -F \"#{pane_id} #{pane_pid}\"`);\n  if (!output) return [];\n  return output\n    .split('\\n')\n    .filter(Boolean)\n    .map(line => {\n      const [paneId, panePid] = line.split(' ');\n      return { paneId: paneId!, panePid: panePid! };\n    });\n}\n\nexport function setPaneTitle(paneTarget: string, title: string): void {\n  execSafe(`tmux select-pane -t \"${paneTarget}\" -T ${shellQuote(title)}`);\n}\n\nexport function setPaneStyle(paneTarget: string, color: string): void {\n  const fmt = `#[fg=${color},bold] #{pane_title} #[fg=${color}]#{pane_current_path} #[default]`;\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-border-format ${shellQuote(fmt)}`);\n  // Store color as a per-pane user variable. The window-level border styles use a\n  // format string that resolves #{@pane_color} per-pane at render time, giving each\n  // pane its own border color (pane-border-style itself is window-level / last-write-wins).\n  execSafe(`tmux set -p -t \"${paneTarget}\" @pane_color \"${color}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-active-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n}\n\nexport function sendSignal(paneTarget: string, signal: string): void {\n  const info = execSafe(`tmux list-panes -t \"${paneTarget}\" -F \"#{pane_pid}\"`);\n  if (!info) return;\n  const pid = info.split('\\n')[0]?.trim();\n  if (pid) {\n    execSafe(`kill -${signal} ${pid}`);\n  }\n}\n\nexport function selectLayout(windowTarget: string, layout: string = 'even-horizontal'): void {\n  execSafe(`tmux select-layout -t \"${windowTarget}\" ${layout}`);\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","type PaneEntry = {\n  sessionId: string;\n  role: 'orchestrator' | 'agent';\n  agentId?: string;\n};\n\nconst paneMap = new Map<string, PaneEntry>();\n\nexport function registerPane(paneId: string, sessionId: string, role: 'orchestrator' | 'agent', agentId?: string): void {\n  paneMap.set(paneId, { sessionId, role, agentId });\n}\n\nexport function unregisterPane(paneId: string): void {\n  paneMap.delete(paneId);\n}\n\nexport function unregisterAgentPane(sessionId: string, agentId: string): void {\n  for (const [paneId, entry] of paneMap) {\n    if (entry.sessionId === sessionId && entry.agentId === agentId) {\n      paneMap.delete(paneId);\n      return;\n    }\n  }\n}\n\nexport function unregisterSessionPanes(sessionId: string): void {\n  for (const [paneId, entry] of paneMap) {\n    if (entry.sessionId === sessionId) {\n      paneMap.delete(paneId);\n    }\n  }\n}\n\nexport function lookupPane(paneId: string): PaneEntry | undefined {\n  return paneMap.get(paneId);\n}\n","import { readFileSync, writeFileSync, mkdirSync, readdirSync, existsSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport type { Agent, AgentReport } from '../shared/types.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getNextColor, resolveAgentTypeColor } from './colors.js';\nimport { getWindowId } from './orchestrator.js';\nimport { promptsDir, reportsDir, reportFilePath } from '../shared/paths.js';\nimport { createWorktreeShell, bootstrapWorktree, loadWorktreeConfig, countWorktreeAgents } from './worktree.js';\nimport { registerPane, unregisterPane, unregisterAgentPane } from './pane-registry.js';\n\nconst agentCounters = new Map<string, number>();\n\nexport function resetAgentCounter(sessionId: string, value: number = 0): void {\n  agentCounters.set(sessionId, value);\n}\n\nexport function resetAgentCounterFromState(sessionId: string, agents: { id: string }[]): void {\n  let max = 0;\n  for (const a of agents) {\n    const match = a.id.match(/^agent-(\\d+)$/);\n    if (match) max = Math.max(max, parseInt(match[1]!, 10));\n  }\n  agentCounters.set(sessionId, max);\n}\n\nexport function clearAgentCounter(sessionId: string): void {\n  agentCounters.delete(sessionId);\n}\n\ninterface WorktreeContext {\n  offset: number;\n  total: number;\n  branchName: string;\n}\n\nfunction renderAgentSuffix(sessionId: string, instruction: string, worktreeContext?: WorktreeContext): string {\n  const templatePath = resolve(import.meta.dirname, '../templates/agent-suffix.md');\n  let template: string;\n  try {\n    template = readFileSync(templatePath, 'utf-8');\n  } catch {\n    template = `# Sisyphus Agent\\nSession: {{SESSION_ID}}\\nTask: {{INSTRUCTION}}`;\n  }\n\n  let worktreeBlock = '';\n  if (worktreeContext) {\n    worktreeBlock = [\n      '## Worktree Context',\n      `You are working in an isolated git worktree on branch \\`${worktreeContext.branchName}\\`.`,\n      `If you start any services that require ports, add ${worktreeContext.offset} to the default port.`,\n    ].join('\\n');\n  }\n\n  return template\n    .replace(/\\{\\{SESSION_ID\\}\\}/g, sessionId)\n    .replace(/\\{\\{INSTRUCTION\\}\\}/g, instruction)\n    .replace(/\\{\\{WORKTREE_CONTEXT\\}\\}/g, worktreeBlock);\n}\n\nexport interface SpawnAgentOpts {\n  sessionId: string;\n  cwd: string;\n  agentType: string;\n  name: string;\n  instruction: string;\n  windowId: string;\n  worktree?: boolean;\n}\n\nexport async function spawnAgent(opts: SpawnAgentOpts): Promise<Agent> {\n  const { sessionId, cwd, agentType, name, instruction, windowId } = opts;\n  const count = (agentCounters.get(sessionId) ?? 0) + 1;\n  agentCounters.set(sessionId, count);\n  const agentId = `agent-${String(count).padStart(3, '0')}`;\n  const pluginPath = resolve(import.meta.dirname, '../templates/agent-plugin');\n  const color = resolveAgentTypeColor(agentType, pluginPath, cwd) ?? getNextColor(sessionId);\n\n  let paneCwd = cwd;\n  let worktreePath: string | undefined;\n  let branchName: string | undefined;\n  let worktreeContext: WorktreeContext | undefined;\n\n  if (opts.worktree) {\n    // Fast: git branch + worktree add + symlinks only (no bootstrap/init)\n    const wt = createWorktreeShell(cwd, sessionId, agentId);\n    worktreePath = wt.worktreePath;\n    branchName = wt.branchName;\n    paneCwd = worktreePath;\n\n    const session = state.getSession(cwd, sessionId);\n    const portOffset = countWorktreeAgents(session.agents) + 1;\n    worktreeContext = { offset: portOffset, total: portOffset, branchName };\n  }\n\n  const paneId = tmux.createPane(windowId, paneCwd);\n  registerPane(paneId, sessionId, 'agent', agentId);\n  tmux.setPaneTitle(paneId, `${name} (${agentId})`);\n  tmux.setPaneStyle(paneId, color);\n\n  const suffix = renderAgentSuffix(sessionId, instruction, worktreeContext);\n  const suffixFilePath = `${promptsDir(cwd, sessionId)}/${agentId}-system.md`;\n  writeFileSync(suffixFilePath, suffix, 'utf-8');\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='${agentId}'`,\n    ...(worktreeContext ? [`export SISYPHUS_PORT_OFFSET='${worktreeContext.offset}'`] : []),\n  ].join(' && ');\n\n  const agentFlag = agentType ? ` --agent ${shellQuote(agentType)}` : '';\n  const claudeCmd = `claude --dangerously-skip-permissions --plugin-dir \"${pluginPath}\"${agentFlag} --append-system-prompt \"$(cat '${suffixFilePath}')\" ${shellQuote(instruction)}`;\n  const notifyCmd = `sisyphus notify pane-exited --pane-id ${paneId}`;\n  const fullCmd = `${bannerCmd} ${envExports} && ${claudeCmd}; ${notifyCmd}`;\n\n  const agent: Agent = {\n    id: agentId,\n    name,\n    agentType,\n    color,\n    instruction,\n    status: 'running',\n    spawnedAt: new Date().toISOString(),\n    completedAt: null,\n    reports: [],\n    paneId,\n    ...(worktreePath ? { worktreePath, branchName, mergeStatus: 'pending' as const } : {}),\n  };\n\n  await state.addAgent(cwd, sessionId, agent);\n\n  if (opts.worktree && worktreePath) {\n    // Defer bootstrap so the daemon can respond to the CLI before running\n    // the potentially slow init command (e.g. npm install).\n    // The pane is already visible; Claude command is sent after bootstrap.\n    const config = loadWorktreeConfig(cwd);\n    if (config) {\n      const wtPath = worktreePath;\n      setImmediate(() => {\n        try {\n          bootstrapWorktree(cwd, wtPath, config);\n        } catch (err) {\n          console.error(`[sisyphus] worktree bootstrap failed for ${agentId}: ${err instanceof Error ? err.message : err}`);\n        }\n        tmux.sendKeys(paneId, fullCmd);\n      });\n    } else {\n      tmux.sendKeys(paneId, fullCmd);\n    }\n  } else {\n    tmux.sendKeys(paneId, fullCmd);\n  }\n\n  return agent;\n}\n\nfunction nextReportNumber(cwd: string, sessionId: string, agentId: string): string {\n  const dir = reportsDir(cwd, sessionId);\n  try {\n    const files = readdirSync(dir).filter(f => f.startsWith(`${agentId}-`) && !f.endsWith('-final.md'));\n    return String(files.length + 1).padStart(3, '0');\n  } catch {\n    return '001';\n  }\n}\n\nexport async function handleAgentReport(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  content: string,\n): Promise<void> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const num = nextReportNumber(cwd, sessionId, agentId);\n  const filePath = reportFilePath(cwd, sessionId, agentId, num);\n  writeFileSync(filePath, content, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'update',\n    filePath,\n    summary: content.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n}\n\nexport async function handleAgentSubmit(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  report: string,\n): Promise<boolean> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const filePath = reportFilePath(cwd, sessionId, agentId, 'final');\n  writeFileSync(filePath, report, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'final',\n    filePath,\n    summary: report.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'completed',\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  const agentArr = session.agents;\n  const agent = agentArr.slice().reverse().find(a => a.id === agentId);\n  if (agent) {\n    unregisterPane(agent.paneId);\n    tmux.killPane(agent.paneId);\n  }\n\n  const windowId = getWindowId(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  return allAgentsDone(session);\n}\n\nexport async function handleAgentKilled(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  reason: string,\n): Promise<boolean> {\n  unregisterAgentPane(sessionId, agentId);\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'killed',\n    killedReason: reason,\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  return allAgentsDone(session);\n}\n\n// Note: this checks ALL running agents in the session, not just orchestrator-spawned ones.\n// Agents can also call `sisyphus spawn`, and those child agents are included here —\n// the orchestrator won't respawn until every agent (including agent-spawned ones) finishes.\nfunction allAgentsDone(session: import('../shared/types.js').Session): boolean {\n  const running = session.agents.filter(a => a.status === 'running');\n  return running.length === 0 && session.agents.length > 0;\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","import { execSync } from 'node:child_process';\nimport { existsSync, mkdirSync, readFileSync, readdirSync, rmSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport type { Agent } from '../shared/types.js';\nimport type { WorktreeConfig } from '../shared/config.js';\nimport { worktreeConfigPath, worktreeBaseDir } from '../shared/paths.js';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string, cwd?: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV, cwd }).trim();\n}\n\nfunction execSafe(cmd: string, cwd?: string): string | null {\n  try {\n    return exec(cmd, cwd);\n  } catch {\n    return null;\n  }\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nexport interface MergeResult {\n  agentId: string;\n  name: string;\n  status: 'merged' | 'conflict' | 'no-changes';\n  conflictDetails?: string;\n}\n\nexport function loadWorktreeConfig(cwd: string): WorktreeConfig | null {\n  try {\n    const content = readFileSync(worktreeConfigPath(cwd), 'utf-8');\n    return JSON.parse(content) as WorktreeConfig;\n  } catch {\n    return null;\n  }\n}\n\n/**\n * Create git worktree (branch + add + symlinks) without running bootstrap.\n * Fast enough to run synchronously before responding to the CLI.\n */\nexport function createWorktreeShell(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n): { worktreePath: string; branchName: string } {\n  const branchName = `sisyphus/${sessionId.slice(0, 8)}/${agentId}`;\n  // Bug B: Include session prefix in path to prevent cross-session collisions\n  const worktreePath = join(worktreeBaseDir(cwd), sessionId.slice(0, 8), agentId);\n\n  mkdirSync(dirname(worktreePath), { recursive: true });\n\n  // Bug C: Clean stale worktree entries before creating\n  execSafe(`git -C ${shellQuote(cwd)} worktree prune`);\n  if (existsSync(worktreePath)) {\n    execSafe(`git -C ${shellQuote(cwd)} worktree remove --force ${shellQuote(worktreePath)}`);\n  }\n  // If the branch already exists from a previous run, remove it\n  execSafe(`git -C ${shellQuote(cwd)} branch -D ${shellQuote(branchName)}`);\n\n  exec(`git -C ${shellQuote(cwd)} branch ${shellQuote(branchName)} HEAD`);\n  exec(`git -C ${shellQuote(cwd)} worktree add ${shellQuote(worktreePath)} ${shellQuote(branchName)}`);\n\n  return { worktreePath, branchName };\n}\n\n/**\n * Create git worktree AND run bootstrap synchronously.\n * Use createWorktreeShell + bootstrapWorktree separately when you need\n * to defer the slow bootstrap to avoid blocking.\n */\nexport function createWorktree(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n): { worktreePath: string; branchName: string } {\n  const result = createWorktreeShell(cwd, sessionId, agentId);\n\n  const config = loadWorktreeConfig(cwd);\n  if (config) {\n    bootstrapWorktree(cwd, result.worktreePath, config);\n  }\n\n  return result;\n}\n\nexport function bootstrapWorktree(cwd: string, worktreePath: string, config: WorktreeConfig): void {\n  // Process copy entries\n  if (config.copy) {\n    for (const entry of config.copy) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`cp -r ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process clone entries (APFS CoW on macOS, fallback to cp -r)\n  if (config.clone) {\n    for (const entry of config.clone) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      const src = shellQuote(join(cwd, entry));\n      const dstQ = shellQuote(dest);\n      if (execSafe(`cp -Rc ${src} ${dstQ}`) === null) {\n        execSafe(`cp -r ${src} ${dstQ}`);\n      }\n    }\n  }\n\n  // Process symlink entries\n  if (config.symlink) {\n    for (const entry of config.symlink) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`ln -s ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process init command\n  if (config.init) {\n    try {\n      exec(config.init, worktreePath);\n    } catch (err) {\n      console.error(`[sisyphus] worktree init command failed: ${err instanceof Error ? err.message : err}`);\n    }\n  }\n}\n\n/**\n * Resolve the branch checked out in a worktree by parsing `git worktree list --porcelain`.\n * Returns null if the worktree isn't found or has a detached HEAD.\n */\nfunction resolveWorktreeBranch(cwd: string, worktreePath: string): string | null {\n  const output = execSafe(`git -C ${shellQuote(cwd)} worktree list --porcelain`);\n  if (!output) return null;\n\n  const lines = output.split('\\n');\n  for (let i = 0; i < lines.length; i++) {\n    if (lines[i] === `worktree ${worktreePath}`) {\n      for (let j = i + 1; j < lines.length; j++) {\n        const line = lines[j]!;\n        if (line === '') break; // end of this worktree block\n        if (line.startsWith('branch refs/heads/')) {\n          return line.slice('branch refs/heads/'.length);\n        }\n      }\n      break;\n    }\n  }\n  return null;\n}\n\nexport function mergeWorktrees(cwd: string, agents: Agent[]): MergeResult[] {\n  const pending = agents.filter(\n    a => a.worktreePath && a.mergeStatus === 'pending',\n  );\n\n  const results: MergeResult[] = [];\n\n  // Snapshot any uncommitted .sisyphus state changes before merging\n  // so agent branches don't conflict with main's session state updates\n  execSafe(`git -C ${shellQuote(cwd)} add .sisyphus`);\n  execSafe(`git -C ${shellQuote(cwd)} commit -m 'sisyphus: snapshot session state before merge'`);\n\n  for (const agent of pending) {\n    const branch = resolveWorktreeBranch(cwd, agent.worktreePath!);\n\n    if (!branch) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      // Best-effort cleanup — branch name unknown, just remove worktree dir\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)} --force`);\n      continue;\n    }\n\n    // Check if branch has commits ahead of merge base\n    const aheadLog = execSafe(`git -C ${shellQuote(cwd)} log HEAD..${shellQuote(branch)} --oneline`);\n    if (!aheadLog) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      cleanupWorktree(cwd, agent.worktreePath!, branch);\n      continue;\n    }\n\n    // Attempt merge — capture stderr on failure for conflict details\n    const mergeMsg = `sisyphus: merge ${agent.id} (${agent.name})`;\n    const mergeCmd = `git -C ${shellQuote(cwd)} merge --no-ff ${shellQuote(branch)} -m ${shellQuote(mergeMsg)}`;\n\n    try {\n      exec(mergeCmd);\n      // Merge succeeded — clean up worktree and branch\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)}`);\n      execSafe(`git -C ${shellQuote(cwd)} branch -d ${shellQuote(branch)}`);\n      results.push({ agentId: agent.id, name: agent.name, status: 'merged' });\n    } catch (err: unknown) {\n      // Merge failed — abort and leave worktree intact for manual resolution\n      execSafe(`git -C ${shellQuote(cwd)} merge --abort`);\n      // Git outputs conflict details (which files, conflict type) to stdout, not stderr\n      const errObj = err as { stdout?: Buffer | string; stderr?: Buffer | string };\n      const stdout = errObj.stdout\n        ? (typeof errObj.stdout === 'string' ? errObj.stdout : errObj.stdout.toString('utf-8')).trim()\n        : '';\n      const stderr = errObj.stderr\n        ? (typeof errObj.stderr === 'string' ? errObj.stderr : errObj.stderr.toString('utf-8')).trim()\n        : '';\n      const conflictDetails = stdout || stderr || (err instanceof Error ? err.message : String(err));\n      results.push({ agentId: agent.id, name: agent.name, status: 'conflict', conflictDetails });\n    }\n  }\n\n  return results;\n}\n\nexport function cleanupWorktree(cwd: string, worktreePath: string, branchName: string): void {\n  execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(worktreePath)} --force`);\n  execSafe(`git -C ${shellQuote(cwd)} branch -D ${shellQuote(branchName)}`);\n\n  // Remove the worktree base dir if empty\n  const baseDir = dirname(worktreePath);\n  try {\n    const entries = readdirSync(baseDir);\n    if (entries.length === 0) {\n      rmSync(baseDir, { recursive: true });\n    }\n  } catch {\n    // Ignore — directory may already be gone\n  }\n}\n\nexport function countWorktreeAgents(agents: Agent[]): number {\n  return agents.filter(a => a.worktreePath && a.status === 'running').length;\n}\n","import * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getOrchestratorPaneId, cleanupSessionMaps } from './orchestrator.js';\nimport { handleAgentKilled } from './agent.js';\n\ntype RespawnCallback = (sessionId: string, cwd: string, windowId: string) => void;\n\nlet monitorInterval: ReturnType<typeof setInterval> | null = null;\nlet onAllAgentsDone: RespawnCallback | null = null;\n\nexport function setRespawnCallback(cb: RespawnCallback): void {\n  onAllAgentsDone = cb;\n}\n\nexport function startMonitor(pollIntervalMs: number = 5000): void {\n  if (monitorInterval) return;\n  monitorInterval = setInterval(() => {\n    pollAllSessions().catch(err => {\n      console.error('[sisyphus] Pane monitor error:', err);\n    });\n  }, pollIntervalMs);\n}\n\nexport function stopMonitor(): void {\n  if (monitorInterval) {\n    clearInterval(monitorInterval);\n    monitorInterval = null;\n  }\n}\n\nconst trackedSessions = new Map<string, { id: string; cwd: string; tmuxSession: string; windowId: string | null }>();\n\nexport function trackSession(sessionId: string, cwd: string, tmuxSession: string): void {\n  // windowId is registered separately via updateTrackedWindow after spawnOrchestrator sets it\n  const existing = trackedSessions.get(sessionId);\n  trackedSessions.set(sessionId, { id: sessionId, cwd, tmuxSession, windowId: existing ? existing.windowId : null });\n}\n\nexport function updateTrackedWindow(sessionId: string, windowId: string): void {\n  const entry = trackedSessions.get(sessionId);\n  if (!entry) throw new Error(`Cannot update window for untracked session: ${sessionId}`);\n  entry.windowId = windowId;\n}\n\nexport function untrackSession(sessionId: string): void {\n  trackedSessions.delete(sessionId);\n}\n\nasync function pollAllSessions(): Promise<void> {\n  for (const { id: sessionId, cwd, windowId } of trackedSessions.values()) {\n    if (windowId) {\n      await pollSession(sessionId, cwd, windowId);\n    }\n  }\n}\n\nasync function pollSession(sessionId: string, cwd: string, windowId: string): Promise<void> {\n  let session;\n  try {\n    session = state.getSession(cwd, sessionId);\n  } catch (err) {\n    console.error(`[sisyphus] Failed to read state for session ${sessionId}:`, err);\n    return;\n  }\n\n  if (session.status === 'completed') {\n    const orchPaneId = getOrchestratorPaneId(sessionId);\n    if (orchPaneId) {\n      const livePanes = tmux.listPanes(windowId);\n      const livePaneIds = new Set(livePanes.map(p => p.paneId));\n      if (!livePaneIds.has(orchPaneId)) {\n        cleanupSessionMaps(sessionId);\n        untrackSession(sessionId);\n        console.log(`[sisyphus] Session ${sessionId} cleaned up: orchestrator pane closed by user`);\n      }\n    } else {\n      // No orchestrator pane tracked — clean up immediately\n      cleanupSessionMaps(sessionId);\n      untrackSession(sessionId);\n    }\n    return;\n  }\n\n  if (session.status !== 'active') return;\n\n  const livePanes = tmux.listPanes(windowId);\n  if (livePanes.length === 0) return;\n\n  const livePaneIds = new Set(livePanes.map(p => p.paneId));\n\n  let paneRemoved = false;\n  for (const agent of session.agents) {\n    if (agent.status !== 'running') continue;\n    if (!livePaneIds.has(agent.paneId)) {\n      paneRemoved = true;\n      const allDone = await handleAgentKilled(cwd, sessionId, agent.id, 'pane closed by user');\n      if (allDone && onAllAgentsDone) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  }\n\n  if (paneRemoved) tmux.selectLayout(windowId);\n\n  // Check orchestrator pane\n  const orchPaneId = getOrchestratorPaneId(sessionId);\n  if (orchPaneId && !livePaneIds.has(orchPaneId)) {\n    // Orchestrator pane disappeared without a yield command\n    const runningAgents = session.agents.filter(a => a.status === 'running');\n    if (runningAgents.length === 0) {\n      // No agents running and orchestrator gone — pause\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane disappeared`);\n    }\n  }\n\n  // Re-read state since handleAgentKilled may have mutated it\n  session = state.getSession(cwd, sessionId);\n  if (\n    session.status === 'active' &&\n    session.agents.length > 0 &&\n    session.agents.every(a => a.status !== 'running') &&\n    (!orchPaneId || !livePaneIds.has(orchPaneId)) &&\n    onAllAgentsDone\n  ) {\n    console.log(`[sisyphus] Detected stuck session ${sessionId}: all agents done, no orchestrator — triggering respawn`);\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n","import { execSync } from 'node:child_process';\nimport { readFileSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport { get } from 'node:https';\n\nfunction isNewer(latest: string, current: string): boolean {\n  const a = latest.split('.').map(Number);\n  const b = current.split('.').map(Number);\n  for (let i = 0; i < Math.max(a.length, b.length); i++) {\n    const av = a[i] ?? 0;\n    const bv = b[i] ?? 0;\n    if (av > bv) return true;\n    if (av < bv) return false;\n  }\n  return false;\n}\n\nfunction readPackageVersion(): string {\n  // Bundled: dist/daemon.js → ../package.json\n  // Source (tsx): src/daemon/updater.ts → ../../package.json\n  for (const rel of ['../package.json', '../../package.json']) {\n    try {\n      const raw = readFileSync(resolve(import.meta.dirname, rel), 'utf-8');\n      const pkg = JSON.parse(raw) as { name?: string; version?: string };\n      if (pkg.name === 'sisyphi' && pkg.version) return pkg.version;\n    } catch {}\n  }\n  return '0.0.0';\n}\n\nconst currentVersion = readPackageVersion();\n\nexport function getCurrentVersion(): string {\n  return currentVersion;\n}\n\nexport function checkForUpdate(): Promise<{ current: string; latest: string } | null> {\n  return new Promise((resolve) => {\n    const timeout = setTimeout(() => {\n      resolve(null);\n    }, 5000);\n\n    const req = get('https://registry.npmjs.org/sisyphi/latest', (res) => {\n      let data = '';\n      res.on('data', (chunk: Buffer) => { data += chunk.toString(); });\n      res.on('end', () => {\n        clearTimeout(timeout);\n        try {\n          const { version: latest } = JSON.parse(data) as { version: string };\n          if (latest && isNewer(latest, currentVersion)) {\n            resolve({ current: currentVersion, latest });\n          } else {\n            resolve(null);\n          }\n        } catch {\n          resolve(null);\n        }\n      });\n    });\n\n    req.on('error', () => {\n      clearTimeout(timeout);\n      resolve(null);\n    });\n  });\n}\n\nexport function applyUpdate(expectedVersion: string): boolean {\n  try {\n    // launchd gives a minimal PATH — ensure node/npm directory is on PATH\n    const nodeDir = resolve(process.execPath, '..');\n    const env = { ...process.env, PATH: `${nodeDir}:${process.env.PATH ?? ''}` };\n    execSync('npm install -g sisyphi', { timeout: 15000, stdio: 'pipe', env });\n\n    // Verify the install actually landed the expected version\n    const result = execSync('npm ls -g sisyphi --json --depth=0', {\n      timeout: 5000, encoding: 'utf-8', env,\n    });\n    const info = JSON.parse(result) as { dependencies?: { sisyphi?: { version?: string } } };\n    const installed = info.dependencies?.sisyphi?.version;\n    if (installed !== expectedVersion) {\n      console.error(`[sisyphus] Update installed ${installed} but expected ${expectedVersion}`);\n      return false;\n    }\n    return true;\n  } catch (err) {\n    console.error('[sisyphus] Auto-update failed:', err);\n    return false;\n  }\n}\n\nexport async function checkAndApply(): Promise<void> {\n  try {\n    const update = await checkForUpdate();\n    if (!update) return;\n\n    console.log(`[sisyphus] Update available: ${update.current} → ${update.latest}`);\n    const success = applyUpdate(update.latest);\n    if (success) {\n      console.log(`[sisyphus] Updated to ${update.latest}, restarting daemon...`);\n      process.exit(0); // launchd respawns with new code\n    }\n  } catch (err) {\n    console.error('[sisyphus] Auto-update check failed:', err);\n  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+{"version":3,"sources":["../src/daemon/index.ts","../src/shared/config.ts","../src/daemon/server.ts","../src/daemon/session-manager.ts","../src/daemon/state.ts","../src/daemon/orchestrator.ts","../src/daemon/colors.ts","../src/daemon/tmux.ts","../src/daemon/pane-registry.ts","../src/daemon/agent.ts","../src/daemon/worktree.ts","../src/daemon/pane-monitor.ts","../src/daemon/updater.ts"],"sourcesContent":["import { mkdirSync, readFileSync, writeFileSync, unlinkSync, existsSync } from 'node:fs';\nimport { execSync } from 'node:child_process';\nimport { setTimeout as sleep } from 'node:timers/promises';\nimport { globalDir, daemonPidPath, statePath } from '../shared/paths.js';\nimport { loadConfig } from '../shared/config.js';\nimport { startServer, stopServer, registerSessionCwd, registerSessionTmux, loadSessionRegistry } from './server.js';\nimport { startMonitor, stopMonitor, setRespawnCallback, trackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { onAllAgentsDone } from './session-manager.js';\nimport { resetAgentCounterFromState } from './agent.js';\nimport { setWindowId, setOrchestratorPaneId, getOrchestratorPaneId } from './orchestrator.js';\nimport { listPanes } from './tmux.js';\nimport { registerPane } from './pane-registry.js';\nimport * as stateModule from './state.js';\nimport type { Session } from '../shared/types.js';\nimport { checkAndApply } from './updater.js';\n\nfunction ensureDirs(): void {\n  mkdirSync(globalDir(), { recursive: true });\n}\n\nfunction isProcessAlive(pid: number): boolean {\n  try {\n    process.kill(pid, 0);\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction readPid(): number | null {\n  const pidFile = daemonPidPath();\n  try {\n    const pid = parseInt(readFileSync(pidFile, 'utf-8').trim(), 10);\n    return pid && isProcessAlive(pid) ? pid : null;\n  } catch {\n    return null;\n  }\n}\n\nfunction acquirePidLock(): void {\n  const pid = readPid();\n  if (pid) {\n    console.error(`[sisyphus] Daemon already running (pid ${pid}). Use 'sisyphusd restart' or 'sisyphusd stop' first.`);\n    process.exit(0);\n  }\n  writeFileSync(daemonPidPath(), String(process.pid), 'utf-8');\n}\n\nfunction isLaunchdManaged(): boolean {\n  try {\n    execSync('launchctl list com.sisyphus.daemon', { stdio: 'pipe' });\n    return true;\n  } catch {\n    return false;\n  }\n}\n\nfunction releasePidLock(): void {\n  try {\n    unlinkSync(daemonPidPath());\n  } catch {\n    // Already gone\n  }\n}\n\nfunction stopDaemon(): boolean {\n  const pid = readPid();\n  if (!pid) {\n    console.log('[sisyphus] Daemon is not running');\n    // Clean up stale pid file if it exists\n    releasePidLock();\n    return false;\n  }\n\n  console.log(`[sisyphus] Stopping daemon (pid ${pid})...`);\n  try {\n    process.kill(pid, 'SIGTERM');\n  } catch {\n    console.error(`[sisyphus] Failed to send SIGTERM to pid ${pid}`);\n    return false;\n  }\n\n  // Wait for process to exit (up to 5s)\n  const deadline = Date.now() + 5000;\n  while (Date.now() < deadline) {\n    if (!isProcessAlive(pid)) {\n      console.log('[sisyphus] Daemon stopped');\n      releasePidLock();\n      return true;\n    }\n    // Busy-wait in small increments (synchronous — fine for a CLI command)\n    const wait = Date.now() + 100;\n    while (Date.now() < wait) { /* spin */ }\n  }\n\n  console.error(`[sisyphus] Daemon (pid ${pid}) did not exit within 5s, sending SIGKILL`);\n  try {\n    process.kill(pid, 'SIGKILL');\n  } catch { /* already dead */ }\n  releasePidLock();\n  return true;\n}\n\nasync function recoverSessions(): Promise<void> {\n  const registry = loadSessionRegistry();\n  const entries = Object.entries(registry);\n\n  if (entries.length === 0) {\n    console.log('[sisyphus] No sessions to recover');\n    return;\n  }\n\n  let recovered = 0;\n  for (const [sessionId, cwd] of entries) {\n    const stateFile = statePath(cwd, sessionId);\n    if (!existsSync(stateFile)) {\n      continue;\n    }\n\n    try {\n      const session = JSON.parse(readFileSync(stateFile, 'utf-8')) as Session;\n      if (session.status === 'active' || session.status === 'paused') {\n        registerSessionCwd(sessionId, cwd);\n        resetAgentCounterFromState(sessionId, session.agents ?? []);\n\n        // Reconnect to tmux panes if info was persisted\n        if (session.tmuxSessionName && session.tmuxWindowId) {\n          const livePanes = listPanes(session.tmuxWindowId);\n          if (livePanes.length > 0) {\n            registerSessionTmux(sessionId, session.tmuxSessionName, session.tmuxWindowId);\n            setWindowId(sessionId, session.tmuxWindowId);\n            trackSession(sessionId, cwd, session.tmuxSessionName);\n            updateTrackedWindow(sessionId, session.tmuxWindowId);\n\n            // Recover orchestrator pane from last incomplete cycle\n            const lastIncompleteCycle = [...session.orchestratorCycles].reverse().find(c => !c.completedAt && c.paneId);\n            if (lastIncompleteCycle?.paneId) {\n              setOrchestratorPaneId(sessionId, lastIncompleteCycle.paneId);\n              const livePaneIds = new Set(livePanes.map(p => p.paneId));\n              if (livePaneIds.has(lastIncompleteCycle.paneId)) {\n                registerPane(lastIncompleteCycle.paneId, sessionId, 'orchestrator');\n              }\n            }\n\n            // Register live agent panes\n            for (const agent of session.agents) {\n              if (agent.status === 'running' && agent.paneId) {\n                const livePaneIds = new Set(livePanes.map(p => p.paneId));\n                if (livePaneIds.has(agent.paneId)) {\n                  registerPane(agent.paneId, sessionId, 'agent', agent.id);\n                }\n              }\n            }\n\n            console.log(`[sisyphus] Reconnected session ${sessionId} to tmux window ${session.tmuxWindowId}`);\n\n            // Detect sessions stuck in \"all agents done, no orchestrator\" state\n            if (session.status === 'active' && session.agents.length > 0) {\n              const hasRunningAgents = session.agents.some(a => a.status === 'running');\n              if (!hasRunningAgents) {\n                const livePaneIds = new Set(livePanes.map(p => p.paneId));\n                const orchestratorPaneId = getOrchestratorPaneId(sessionId);\n                const orchestratorAlive = orchestratorPaneId && livePaneIds.has(orchestratorPaneId);\n                if (!orchestratorAlive) {\n                  console.log(`[sisyphus] Detected stuck session ${sessionId} on recovery: triggering orchestrator respawn`);\n                  await onAllAgentsDone(sessionId, cwd, session.tmuxWindowId!);\n                }\n              }\n            }\n          } else {\n            // Window gone — pause the session so user can `sisyphus resume`\n            if (session.status === 'active') {\n              await stateModule.updateSessionStatus(cwd, sessionId, 'paused');\n              console.log(`[sisyphus] Session ${sessionId} paused: tmux window no longer exists`);\n            }\n          }\n        }\n\n        recovered++;\n      }\n    } catch {\n      console.error(`[sisyphus] Failed to read session state for ${sessionId}, skipping`);\n    }\n  }\n\n  console.log(`[sisyphus] Recovered ${recovered} session(s) from registry`);\n}\n\nasync function startDaemon(): Promise<void> {\n  console.log('[sisyphus] Starting daemon...');\n  ensureDirs();\n\n  const config = loadConfig(process.cwd());\n  if (config.autoUpdate !== false) {\n    await checkAndApply(); // may exit process if update found\n  }\n\n  acquirePidLock();\n\n  setRespawnCallback(onAllAgentsDone);\n\n  await startServer();\n  startMonitor(config.pollIntervalMs);\n\n  await recoverSessions();\n\n  const shutdown = async () => {\n    console.log('[sisyphus] Shutting down...');\n    stopMonitor();\n    await stopServer();\n    releasePidLock();\n    process.exit(0);\n  };\n\n  process.on('SIGTERM', shutdown);\n  process.on('SIGINT', shutdown);\n}\n\nprocess.title = 'sisyphusd';\n\nconst command = process.argv[2];\n\n(async () => {\n  switch (command) {\n    case 'stop':\n      stopDaemon();\n      break;\n\n    case 'restart': {\n      stopDaemon();\n      // If launchd is managing the daemon, just exit — it will respawn via KeepAlive\n      if (isLaunchdManaged()) {\n        // Brief poll so we can report the new PID\n        for (let i = 0; i < 6; i++) {\n          await sleep(500);\n          const respawnedPid = readPid();\n          if (respawnedPid) {\n            console.log(`[sisyphus] Daemon restarted (pid ${respawnedPid}) by process manager`);\n            process.exit(0);\n          }\n        }\n        console.log('[sisyphus] Daemon will be restarted by process manager');\n        process.exit(0);\n      }\n      // No process manager — start in-process\n      await startDaemon();\n      break;\n    }\n\n    case 'start':\n    case undefined:\n      await startDaemon();\n      break;\n\n    case 'help':\n    case '--help':\n    case '-h':\n      console.log('Usage: sisyphusd [command]');\n      console.log('');\n      console.log('Commands:');\n      console.log('  start     Start the daemon (default if no command given)');\n      console.log('  stop      Stop the running daemon');\n      console.log('  restart   Stop and restart the daemon');\n      console.log('  help      Show this help message');\n      break;\n\n    default:\n      console.error(`[sisyphus] Unknown command: ${command}`);\n      console.error('Usage: sisyphusd [start|stop|restart|help]');\n      process.exit(1);\n  }\n})().catch((err) => {\n  console.error('[sisyphus] Fatal error:', err);\n  process.exit(1);\n});\n","import { readFileSync } from 'node:fs';\nimport { globalConfigPath, projectConfigPath } from './paths.js';\n\nexport interface WorktreeConfig {\n  copy?: string[];\n  clone?: string[];\n  symlink?: string[];\n  init?: string;\n}\n\nexport interface Config {\n  model?: string;\n  tmuxSession?: string;\n  orchestratorPrompt?: string;\n  pollIntervalMs?: number;\n  autoUpdate?: boolean;\n}\n\nconst DEFAULT_CONFIG: Config = {\n  pollIntervalMs: 5000,\n};\n\nfunction readJsonFile(filePath: string): Partial<Config> {\n  try {\n    const content = readFileSync(filePath, 'utf-8');\n    return JSON.parse(content) as Partial<Config>;\n  } catch {\n    return {};\n  }\n}\n\nexport function loadConfig(cwd: string): Config {\n  const global = readJsonFile(globalConfigPath());\n  const project = readJsonFile(projectConfigPath(cwd));\n  return { ...DEFAULT_CONFIG, ...global, ...project };\n}\n","import { createServer, type Server } from 'node:net';\nimport { unlinkSync, existsSync, writeFileSync, readFileSync, mkdirSync } from 'node:fs';\nimport { socketPath, globalDir } from '../shared/paths.js';\nimport { join } from 'node:path';\nimport type { Request, Response } from '../shared/protocol.js';\nimport * as sessionManager from './session-manager.js';\nimport { lookupPane, unregisterPane } from './pane-registry.js';\n\nlet server: Server | null = null;\n\n// Track the cwd for each session so we can route requests\nconst sessionCwdMap = new Map<string, string>();\n// Track the originating tmux session for each sisyphus session\nconst sessionTmuxMap = new Map<string, string>();\n// Track the originating tmux window for each sisyphus session\nconst sessionWindowMap = new Map<string, string>();\n\nexport function getSessionCwd(sessionId: string): string | undefined {\n  return sessionCwdMap.get(sessionId);\n}\n\nexport function getSessionTmux(sessionId: string): string | undefined {\n  return sessionTmuxMap.get(sessionId);\n}\n\nfunction registryPath(): string {\n  return join(globalDir(), 'session-registry.json');\n}\n\nfunction persistSessionRegistry(): void {\n  const dir = globalDir();\n  mkdirSync(dir, { recursive: true });\n  const registry: Record<string, string> = {};\n  for (const [id, cwd] of sessionCwdMap) {\n    registry[id] = cwd;\n  }\n  writeFileSync(registryPath(), JSON.stringify(registry, null, 2), 'utf-8');\n}\n\nexport function loadSessionRegistry(): Record<string, string> {\n  const p = registryPath();\n  if (!existsSync(p)) return {};\n  try {\n    return JSON.parse(readFileSync(p, 'utf-8')) as Record<string, string>;\n  } catch {\n    return {};\n  }\n}\n\nexport function registerSessionCwd(sessionId: string, cwd: string): void {\n  sessionCwdMap.set(sessionId, cwd);\n  persistSessionRegistry();\n}\n\nexport function registerSessionTmux(sessionId: string, tmuxSession: string, windowId: string): void {\n  sessionTmuxMap.set(sessionId, tmuxSession);\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nasync function handleRequest(req: Request): Promise<Response> {\n  try {\n    switch (req.type) {\n      case 'start': {\n        const session = await sessionManager.startSession(req.task, req.cwd, req.tmuxSession, req.tmuxWindow);\n        registerSessionCwd(session.id, req.cwd);\n        sessionTmuxMap.set(session.id, req.tmuxSession);\n        sessionWindowMap.set(session.id, req.tmuxWindow);\n        return { ok: true, data: { sessionId: session.id } };\n      }\n\n      case 'spawn': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const result = await sessionManager.handleSpawn(req.sessionId, cwd, req.agentType, req.name, req.instruction, req.worktree);\n        return { ok: true, data: { agentId: result.agentId } };\n      }\n\n      case 'submit': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const windowId = sessionWindowMap.get(req.sessionId);\n        if (!windowId) return { ok: false, error: `No tmux window found for session: ${req.sessionId}` };\n        await sessionManager.handleSubmit(cwd, req.sessionId, req.agentId, req.report, windowId);\n        return { ok: true };\n      }\n\n      case 'report': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleReport(cwd, req.sessionId, req.agentId, req.content);\n        return { ok: true };\n      }\n\n      case 'yield': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleYield(req.sessionId, cwd, req.nextPrompt);\n        return { ok: true };\n      }\n\n      case 'complete': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleComplete(req.sessionId, cwd, req.report);\n        return { ok: true };\n      }\n\n      case 'status': {\n        if (req.sessionId) {\n          const cwd = sessionCwdMap.get(req.sessionId);\n          if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n          const session = sessionManager.getSessionStatus(cwd, req.sessionId);\n          return { ok: true, data: { session: session as unknown as Record<string, unknown> } };\n        }\n        return { ok: true, data: { message: 'daemon running' } };\n      }\n\n      case 'list': {\n        const allSessions: Array<Record<string, unknown>> = [];\n        if (req.all) {\n          // List sessions across all known cwds\n          const seenCwds = new Set<string>();\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            const sessions = sessionManager.listSessions(cwd);\n            allSessions.push(...sessions.map(s => ({ ...s, cwd } as unknown as Record<string, unknown>)));\n          }\n        } else {\n          // List sessions for the requesting cwd only\n          const sessions = sessionManager.listSessions(req.cwd);\n          allSessions.push(...sessions.map(s => ({ ...s, cwd: req.cwd } as unknown as Record<string, unknown>)));\n          // Count total across all cwds for the hint\n          let totalCount = allSessions.length;\n          const seenCwds = new Set<string>([req.cwd]);\n          for (const cwd of sessionCwdMap.values()) {\n            if (seenCwds.has(cwd)) continue;\n            seenCwds.add(cwd);\n            totalCount += sessionManager.listSessions(cwd).length;\n          }\n          if (totalCount > allSessions.length) {\n            return { ok: true, data: { sessions: allSessions, totalCount, filtered: true } };\n          }\n        }\n        return { ok: true, data: { sessions: allSessions } };\n      }\n\n      case 'resume': {\n        let cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) {\n          // Session not in memory — try to recover from disk using the cwd provided by CLI\n          const stateFile = `${req.cwd}/.sisyphus/sessions/${req.sessionId}/state.json`;\n          if (existsSync(stateFile)) {\n            cwd = req.cwd;\n            registerSessionCwd(req.sessionId, cwd);\n          } else {\n            return { ok: false, error: `Unknown session: ${req.sessionId}. No state.json found at ${stateFile}` };\n          }\n        }\n        sessionTmuxMap.set(req.sessionId, req.tmuxSession);\n        sessionWindowMap.set(req.sessionId, req.tmuxWindow);\n        const session = await sessionManager.resumeSession(req.sessionId, cwd, req.tmuxSession, req.tmuxWindow, req.message);\n        return { ok: true, data: { sessionId: session.id, status: session.status } };\n      }\n\n      case 'register_claude_session': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        await sessionManager.handleRegisterClaudeSession(cwd, req.sessionId, req.agentId, req.claudeSessionId);\n        return { ok: true };\n      }\n\n      case 'kill': {\n        const cwd = sessionCwdMap.get(req.sessionId);\n        if (!cwd) return { ok: false, error: `Unknown session: ${req.sessionId}` };\n        const killedAgents = await sessionManager.handleKill(req.sessionId, cwd);\n        sessionCwdMap.delete(req.sessionId);\n        sessionTmuxMap.delete(req.sessionId);\n        sessionWindowMap.delete(req.sessionId);\n        persistSessionRegistry();\n        return { ok: true, data: { killedAgents, sessionId: req.sessionId } };\n      }\n\n      case 'pane-exited': {\n        const entry = lookupPane(req.paneId);\n        if (!entry) return { ok: true }; // Already handled or unknown\n        const cwd = sessionCwdMap.get(entry.sessionId);\n        if (!cwd) {\n          unregisterPane(req.paneId);\n          return { ok: true };\n        }\n        unregisterPane(req.paneId);\n        await sessionManager.handlePaneExited(req.paneId, cwd, entry.sessionId, entry.role, entry.agentId);\n        return { ok: true };\n      }\n\n      default:\n        return { ok: false, error: `Unknown request type: ${(req as Record<string, unknown>).type}` };\n    }\n  } catch (err) {\n    const message = err instanceof Error ? err.message : String(err);\n    return { ok: false, error: message };\n  }\n}\n\nexport function startServer(): Promise<Server> {\n  return new Promise((resolve, reject) => {\n    const sock = socketPath();\n\n    if (existsSync(sock)) {\n      unlinkSync(sock);\n    }\n\n    server = createServer((conn) => {\n      let buffer = '';\n\n      conn.on('data', (chunk) => {\n        buffer += chunk.toString();\n        const lines = buffer.split('\\n');\n        buffer = lines.pop()!;\n\n        for (const line of lines) {\n          if (!line.trim()) continue;\n          let req: Request;\n          try {\n            req = JSON.parse(line) as Request;\n          } catch {\n            conn.write(JSON.stringify({ ok: false, error: 'Invalid JSON' }) + '\\n');\n            continue;\n          }\n\n          handleRequest(req).then((res) => {\n            conn.write(JSON.stringify(res) + '\\n');\n          });\n        }\n      });\n\n      conn.on('error', (err) => {\n        console.error('[sisyphus] Connection error:', err.message);\n      });\n    });\n\n    server.on('error', reject);\n\n    server.listen(sock, () => {\n      console.log(`[sisyphus] Daemon listening on ${sock}`);\n      resolve(server!);\n    });\n  });\n}\n\nexport function stopServer(): Promise<void> {\n  return new Promise((resolve) => {\n    if (!server) {\n      resolve();\n      return;\n    }\n    server.close(() => {\n      const sock = socketPath();\n      if (existsSync(sock)) {\n        unlinkSync(sock);\n      }\n      server = null;\n      resolve();\n    });\n  });\n}\n","import { v4 as uuidv4 } from 'uuid';\nimport { existsSync, readdirSync, rmSync } from 'node:fs';\nimport * as state from './state.js';\nimport * as orchestrator from './orchestrator.js';\nimport * as tmux from './tmux.js';\nimport { spawnAgent, resetAgentCounterFromState, clearAgentCounter, handleAgentSubmit, handleAgentReport, handleAgentKilled } from './agent.js';\nimport { trackSession, untrackSession, updateTrackedWindow } from './pane-monitor.js';\nimport { resetColors } from './colors.js';\nimport { sessionDir, sessionsDir } from '../shared/paths.js';\nimport { unregisterSessionPanes } from './pane-registry.js';\nimport type { Session } from '../shared/types.js';\nimport { mergeWorktrees, cleanupWorktree } from './worktree.js';\n\nexport async function startSession(task: string, cwd: string, tmuxSession: string, windowId: string): Promise<Session> {\n  const sessionId = uuidv4();\n  const session = state.createSession(sessionId, task, cwd);\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId);\n  updateTrackedWindow(sessionId, windowId);\n\n  pruneOldSessions(cwd);\n\n  return session;\n}\n\nconst PRUNE_KEEP_COUNT = 10;\nconst PRUNE_KEEP_DAYS = 7;\n\nfunction pruneOldSessions(cwd: string): void {\n  try {\n    const dir = sessionsDir(cwd);\n    if (!existsSync(dir)) return;\n\n    const entries = readdirSync(dir, { withFileTypes: true });\n    const candidates: Array<{ id: string; createdAt: number }> = [];\n\n    for (const entry of entries) {\n      if (!entry.isDirectory()) continue;\n      try {\n        const session = state.getSession(cwd, entry.name);\n        if (session.status === 'active' || session.status === 'paused') continue;\n        candidates.push({ id: session.id, createdAt: new Date(session.createdAt).getTime() });\n      } catch {\n        // Unreadable session dir — skip, don't delete\n      }\n    }\n\n    if (candidates.length <= PRUNE_KEEP_COUNT) return;\n\n    candidates.sort((a, b) => b.createdAt - a.createdAt);\n\n    const cutoff = Date.now() - PRUNE_KEEP_DAYS * 24 * 60 * 60 * 1000;\n    const keep = new Set<string>();\n\n    for (let i = 0; i < Math.min(PRUNE_KEEP_COUNT, candidates.length); i++) {\n      keep.add(candidates[i]!.id);\n    }\n    for (const c of candidates) {\n      if (c.createdAt >= cutoff) keep.add(c.id);\n    }\n\n    for (const c of candidates) {\n      if (keep.has(c.id)) continue;\n      rmSync(sessionDir(cwd, c.id), { recursive: true, force: true });\n    }\n  } catch (err) {\n    console.error('[sisyphus] Session pruning failed:', err);\n  }\n}\n\nexport async function resumeSession(sessionId: string, cwd: string, tmuxSession: string, windowId: string, message?: string): Promise<Session> {\n  const session = state.getSession(cwd, sessionId);\n\n  if (session.status !== 'active') {\n    // Determine which agents still have live panes\n    const livePaneIds = new Set<string>();\n    if (session.tmuxWindowId) {\n      const panes = tmux.listPanes(session.tmuxWindowId);\n      for (const pane of panes) {\n        livePaneIds.add(pane.paneId);\n      }\n    }\n\n    // Mark running agents as \"lost\" only if their pane is gone (or no window ID to check)\n    for (const agent of session.agents) {\n      if (agent.status === 'running') {\n        const isAlive = agent.paneId != null && livePaneIds.has(agent.paneId);\n        if (!isAlive) {\n          await state.updateAgent(cwd, sessionId, agent.id, {\n            status: 'lost',\n            completedAt: new Date().toISOString(),\n            killedReason: 'session resumed — agent was still running',\n          });\n        }\n      }\n    }\n  }\n\n  await state.updateSessionStatus(cwd, sessionId, 'active');\n  await state.updateSessionTmux(cwd, sessionId, tmuxSession, windowId);\n\n  // Reset counters based on existing agents\n  resetAgentCounterFromState(sessionId, session.agents);\n  resetColors(sessionId);\n\n  trackSession(sessionId, cwd, tmuxSession);\n  await orchestrator.spawnOrchestrator(sessionId, cwd, windowId, message);\n  updateTrackedWindow(sessionId, windowId);\n\n  return state.getSession(cwd, sessionId);\n}\n\nexport function getSessionStatus(cwd: string, sessionId: string): Session {\n  return state.getSession(cwd, sessionId);\n}\n\nexport function listSessions(cwd: string): Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> {\n  const dir = sessionsDir(cwd);\n  if (!existsSync(dir)) return [];\n\n  const entries = readdirSync(dir, { withFileTypes: true });\n  const sessions: Array<{ id: string; task: string; status: string; createdAt: string; agentCount: number }> = [];\n\n  for (const entry of entries) {\n    if (!entry.isDirectory()) continue;\n    try {\n      const session = state.getSession(cwd, entry.name);\n      sessions.push({\n        id: session.id,\n        task: session.task,\n        status: session.status,\n        createdAt: session.createdAt,\n        agentCount: session.agents.length,\n      });\n    } catch (err) {\n      console.error(`[sisyphus] Failed to read session ${entry.name}:`, err);\n    }\n  }\n\n  return sessions;\n}\n\nconst pendingRespawns = new Set<string>();\n\nexport function onAllAgentsDone(sessionId: string, cwd: string, windowId: string): void {\n  if (pendingRespawns.has(sessionId)) return;\n\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  pendingRespawns.add(sessionId);\n\n  // Merge any worktree agents before respawning orchestrator\n  const worktreeAgents = session.agents.filter(a => a.worktreePath && a.mergeStatus === 'pending');\n  if (worktreeAgents.length > 0) {\n    const results = mergeWorktrees(cwd, worktreeAgents);\n    for (const result of results) {\n      const mergeStatus = result.status as 'merged' | 'no-changes' | 'conflict';\n      state.updateAgent(cwd, sessionId, result.agentId, {\n        mergeStatus,\n        mergeDetails: result.conflictDetails,\n      }).catch((err: unknown) => console.error(`[sisyphus] Failed to update merge status for ${result.agentId}:`, err));\n    }\n  }\n\n  // Respawn on next tick — agents already finished, no delay needed\n  setImmediate(() => {\n    pendingRespawns.delete(sessionId);\n    orchestrator.spawnOrchestrator(sessionId, cwd, windowId)\n      .then(() => updateTrackedWindow(sessionId, windowId))\n      .catch((err: unknown) => console.error(`[sisyphus] Failed to respawn orchestrator for session ${sessionId}:`, err));\n  });\n}\n\nexport async function handleSpawn(\n  sessionId: string,\n  cwd: string,\n  agentType: string,\n  name: string,\n  instruction: string,\n  worktree?: boolean,\n): Promise<{ agentId: string }> {\n  const windowId = orchestrator.getWindowId(sessionId);\n  if (!windowId) throw new Error(`No tmux window found for session ${sessionId}`);\n\n  const agent = await spawnAgent({\n    sessionId,\n    cwd,\n    agentType,\n    name,\n    instruction,\n    windowId,\n    worktree,\n  });\n\n  await state.appendAgentToLastCycle(cwd, sessionId, agent.id);\n\n  return { agentId: agent.id };\n}\n\nexport async function handleSubmit(cwd: string, sessionId: string, agentId: string, report: string, windowId: string): Promise<void> {\n  const allDone = await handleAgentSubmit(cwd, sessionId, agentId, report);\n  if (allDone) {\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n\nexport async function handleReport(cwd: string, sessionId: string, agentId: string, content: string): Promise<void> {\n  await handleAgentReport(cwd, sessionId, agentId, content);\n}\n\nexport async function handleYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  // Re-activate paused sessions so respawn can proceed\n  const pre = state.getSession(cwd, sessionId);\n  if (pre.status === 'paused') {\n    await state.updateSessionStatus(cwd, sessionId, 'active');\n  }\n\n  await orchestrator.handleOrchestratorYield(sessionId, cwd, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const hasRunningAgents = session.agents.some(a => a.status === 'running');\n  if (!hasRunningAgents) {\n    const windowId = orchestrator.getWindowId(sessionId);\n    if (windowId) {\n      onAllAgentsDone(sessionId, cwd, windowId);\n    }\n  }\n}\n\nexport async function handleComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await orchestrator.handleOrchestratorComplete(sessionId, cwd, report);\n}\n\nexport async function handleRegisterClaudeSession(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  claudeSessionId: string,\n): Promise<void> {\n  await state.updateAgent(cwd, sessionId, agentId, { claudeSessionId });\n}\n\nexport async function handleKill(sessionId: string, cwd: string): Promise<number> {\n  const session = state.getSession(cwd, sessionId);\n  const windowId = orchestrator.getWindowId(sessionId);\n\n  // Kill all running agents\n  let killedAgents = 0;\n  for (const agent of session.agents) {\n    if (agent.status === 'running') {\n      await state.updateAgent(cwd, sessionId, agent.id, {\n        status: 'killed',\n        killedReason: 'session killed by user',\n        completedAt: new Date().toISOString(),\n      });\n      killedAgents++;\n    }\n  }\n\n  // Clean up worktrees for agents that had them\n  for (const agent of session.agents) {\n    if (agent.worktreePath && agent.branchName) {\n      cleanupWorktree(cwd, agent.worktreePath, agent.branchName);\n    }\n  }\n\n  // Kill the orchestrator pane if it exists\n  const orchPaneId = orchestrator.getOrchestratorPaneId(sessionId);\n  if (orchPaneId) {\n    tmux.killPane(orchPaneId);\n  }\n\n  // Mark session as completed\n  await state.updateSessionStatus(cwd, sessionId, 'completed');\n\n  // Untrack from pane monitor and pane registry\n  untrackSession(sessionId);\n  unregisterSessionPanes(sessionId);\n\n  // Kill the entire tmux window\n  if (windowId) {\n    tmux.killWindow(windowId);\n  }\n\n  // Clean up agent counter\n  clearAgentCounter(sessionId);\n\n  return killedAgents;\n}\n\nexport async function handlePaneExited(\n  paneId: string,\n  cwd: string,\n  sessionId: string,\n  role: 'orchestrator' | 'agent',\n  agentId?: string,\n): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  if (session.status !== 'active') return;\n\n  if (role === 'agent' && agentId) {\n    const agent = session.agents.find(a => a.id === agentId);\n    if (!agent || agent.status !== 'running') return;\n\n    const allDone = await handleAgentKilled(cwd, sessionId, agentId, 'pane exited');\n    if (allDone) {\n      const windowId = orchestrator.getWindowId(sessionId);\n      if (windowId) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  } else if (role === 'orchestrator') {\n    // Orchestrator pane exited unexpectedly (crash, context exhaustion, /exit)\n    const hasRunningAgents = session.agents.some(a => a.status === 'running');\n    if (!hasRunningAgents && session.agents.length > 0) {\n      const windowId = orchestrator.getWindowId(sessionId);\n      if (windowId) {\n        console.log(`[sisyphus] Orchestrator pane exited for session ${sessionId}, all agents done — triggering respawn`);\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    } else if (!hasRunningAgents) {\n      // No agents at all — pause session\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane exited with no agents`);\n    }\n  }\n}\n","import { randomUUID } from 'node:crypto';\nimport { mkdirSync, readFileSync, renameSync, writeFileSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport { contextDir, logsPath, planPath, promptsDir, sessionDir, statePath } from '../shared/paths.js';\nimport type { Agent, AgentReport, OrchestratorCycle, Session, SessionStatus } from '../shared/types.js';\n\nconst PLAN_SEED = `---\ndescription: >\n  Living document of what still needs to happen. Write out ne\n---\n`;\n\nconst LOGS_SEED = `---\ndescription: >\n  Session memory. Record important observations, decisions, and findings here.\n  This is your persistent memory across cycles: things you tried, what\n  worked/failed, design decisions and their rationale, gotchas discovered during\n  implementation.\n---\n`;\n\n// Per-session mutex to prevent read-modify-write races\nconst sessionLocks = new Map<string, Promise<void>>();\n\nasync function withSessionLock<T>(sessionId: string, fn: () => T): Promise<T> {\n  const prev = sessionLocks.get(sessionId) ?? Promise.resolve();\n  let resolve: () => void;\n  const next = new Promise<void>(r => { resolve = r; });\n  sessionLocks.set(sessionId, next);\n  await prev;\n  try {\n    return fn();\n  } finally {\n    resolve!();\n  }\n}\n\nfunction atomicWrite(filePath: string, data: string): void {\n  const dir = dirname(filePath);\n  const tmpPath = join(dir, `.state.${randomUUID()}.tmp`);\n  writeFileSync(tmpPath, data, 'utf-8');\n  renameSync(tmpPath, filePath);\n}\n\nexport function createSession(id: string, task: string, cwd: string): Session {\n  const dir = sessionDir(cwd, id);\n  mkdirSync(dir, { recursive: true });\n  mkdirSync(contextDir(cwd, id), { recursive: true });\n  mkdirSync(promptsDir(cwd, id), { recursive: true });\n\n  writeFileSync(planPath(cwd, id), PLAN_SEED, 'utf-8');\n  writeFileSync(logsPath(cwd, id), LOGS_SEED, 'utf-8');\n\n  const session: Session = {\n    id,\n    task,\n    cwd,\n    status: 'active',\n    createdAt: new Date().toISOString(),\n    agents: [],\n    orchestratorCycles: [],\n  };\n\n  atomicWrite(statePath(cwd, id), JSON.stringify(session, null, 2));\n  return session;\n}\n\nexport function getSession(cwd: string, sessionId: string): Session {\n  const content = readFileSync(statePath(cwd, sessionId), 'utf-8');\n  return JSON.parse(content) as Session;\n}\n\nfunction saveSession(session: Session): void {\n  atomicWrite(statePath(session.cwd, session.id), JSON.stringify(session, null, 2));\n}\n\nexport async function addAgent(cwd: string, sessionId: string, agent: Agent): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.agents.push(agent);\n    saveSession(session);\n  });\n}\n\nexport async function updateAgent(cwd: string, sessionId: string, agentId: string, updates: Partial<Agent>): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    Object.assign(agent, updates);\n    saveSession(session);\n  });\n}\n\nexport async function addOrchestratorCycle(cwd: string, sessionId: string, cycle: OrchestratorCycle): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.orchestratorCycles.push(cycle);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionStatus(cwd: string, sessionId: string, status: SessionStatus, completionReport?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = status;\n    if (completionReport !== undefined) {\n      session.completionReport = completionReport;\n    }\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentToLastCycle(cwd: string, sessionId: string, agentId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    cycles[cycles.length - 1]!.agentsSpawned.push(agentId);\n    saveSession(session);\n  });\n}\n\nexport async function completeSession(cwd: string, sessionId: string, report: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.status = 'completed';\n    session.completedAt = new Date().toISOString();\n    session.completionReport = report;\n    saveSession(session);\n  });\n}\n\nexport async function appendAgentReport(cwd: string, sessionId: string, agentId: string, entry: AgentReport): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const agent = session.agents.slice().reverse().find((a: Agent) => a.id === agentId);\n    if (!agent) throw new Error(`Agent ${agentId} not found in session ${sessionId}`);\n    agent.reports.push(entry);\n    saveSession(session);\n  });\n}\n\nexport async function updateSessionTmux(cwd: string, sessionId: string, tmuxSessionName: string, tmuxWindowId: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    session.tmuxSessionName = tmuxSessionName;\n    session.tmuxWindowId = tmuxWindowId;\n    saveSession(session);\n  });\n}\n\nexport async function completeOrchestratorCycle(cwd: string, sessionId: string, nextPrompt?: string): Promise<void> {\n  return withSessionLock(sessionId, () => {\n    const session = getSession(cwd, sessionId);\n    const cycles = session.orchestratorCycles;\n    if (cycles.length === 0) return;\n    const cycle = cycles[cycles.length - 1]!;\n    cycle.completedAt = new Date().toISOString();\n    if (nextPrompt) cycle.nextPrompt = nextPrompt;\n    saveSession(session);\n  });\n}\n","import { existsSync, readdirSync, readFileSync, writeFileSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport { contextDir, logsPath, planPath, projectOrchestratorPromptPath, promptsDir, worktreeConfigPath } from '../shared/paths.js';\nimport type { Agent, Session } from '../shared/types.js';\nimport { ORCHESTRATOR_COLOR } from './colors.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { registerPane, unregisterPane, unregisterSessionPanes } from './pane-registry.js';\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nconst sessionWindowMap = new Map<string, string>();\nconst sessionOrchestratorPane = new Map<string, string>();\n\nexport function getWindowId(sessionId: string): string | undefined {\n  return sessionWindowMap.get(sessionId);\n}\n\nexport function setWindowId(sessionId: string, windowId: string): void {\n  sessionWindowMap.set(sessionId, windowId);\n}\n\nexport function getOrchestratorPaneId(sessionId: string): string | undefined {\n  return sessionOrchestratorPane.get(sessionId);\n}\n\nexport function setOrchestratorPaneId(sessionId: string, paneId: string): void {\n  sessionOrchestratorPane.set(sessionId, paneId);\n}\n\nfunction loadOrchestratorPrompt(cwd: string): string {\n  const projectPath = projectOrchestratorPromptPath(cwd);\n  if (existsSync(projectPath)) {\n    return readFileSync(projectPath, 'utf-8');\n  }\n  const bundledPath = resolve(import.meta.dirname, '../templates/orchestrator.md');\n  return readFileSync(bundledPath, 'utf-8');\n}\n\nfunction formatStateForOrchestrator(session: Session): string {\n  const shortId = session.id.slice(0, 8);\n  const cycleNum = session.orchestratorCycles.length;\n\n  const ctxDir = contextDir(session.cwd, session.id);\n  let contextLines: string;\n  if (existsSync(ctxDir)) {\n    const files = readdirSync(ctxDir);\n    contextLines = files.length > 0 ? files.map(f => `- ${f}`).join('\\n') : '  (none)';\n  } else {\n    contextLines = '  (none)';\n  }\n\n  const planFile = planPath(session.cwd, session.id);\n  const planRef = existsSync(planFile) ? `@${planFile}` : '(empty)';\n\n  const logsFile = logsPath(session.cwd, session.id);\n  const logsRef = existsSync(logsFile) ? `@${logsFile}` : '(empty)';\n\n  const agentLines = session.agents.length > 0\n    ? session.agents.map((a: Agent) => {\n        const header = `- ${a.id} (${a.name}): ${a.status} — ${a.reports.length} report(s)`;\n        if (a.reports.length === 0) return header;\n        let updateNum = 0;\n        const reportLines = a.reports.map(r => {\n          const label = r.type === 'final' ? '[final]' : `[update ${String(++updateNum).padStart(3, '0')}]`;\n          return `  ${label} \"${r.summary}\" → ${r.filePath}`;\n        });\n        return [header, ...reportLines].join('\\n');\n      }).join('\\n')\n    : '  (none)';\n\n  const cycleLines = session.orchestratorCycles.length > 0\n    ? session.orchestratorCycles.map(c => {\n        const spawnedList = c.agentsSpawned.length > 0 ? c.agentsSpawned.join(', ') : '(none)';\n        return `Cycle ${c.cycle}: Spawned ${spawnedList}`;\n      }).join('\\n')\n    : '  (none)';\n\n  // Worktree status — only if any agents have worktree info\n  const worktreeAgents = session.agents.filter(a => a.worktreePath);\n  let worktreeSection = '';\n  if (worktreeAgents.length > 0) {\n    const wtLines = worktreeAgents.map((a: Agent) => {\n      if (a.mergeStatus === 'conflict') {\n        return `- ${a.id}: CONFLICT — ${a.mergeDetails ?? 'unknown'}\\n  Branch: ${a.branchName}\\n  Worktree: ${a.worktreePath}`;\n      }\n      if (a.mergeStatus === 'no-changes') {\n        return `- ${a.id}: NO CHANGES — agent did not commit any work to branch ${a.branchName}`;\n      }\n      const status = a.mergeStatus ?? 'pending';\n      return `- ${a.id}: ${status} (branch ${a.branchName})`;\n    }).join('\\n');\n    worktreeSection = `\\n\\n## Worktrees\\n${wtLines}`;\n  }\n\n  // Worktree hint\n  const worktreeHint = existsSync(worktreeConfigPath(session.cwd))\n    ? 'Worktree config active (`.sisyphus/worktree.json`). Use `--worktree` flag with `sisyphus spawn` to isolate agents in their own worktrees. Recommended for feature work, especially with potential file overlap.'\n    : 'No worktree configuration found. If this session involves parallel work where agents may edit overlapping files, use the `git-management` skill to set up `.sisyphus/worktree.json` and enable worktree isolation.';\n\n  return `<state>\nsession: ${shortId} (cycle ${cycleNum})\ntask: ${session.task}\nstatus: ${session.status}\n\n## Plan\n${planRef}\n\n## Logs\n${logsRef}\n\n## Agents\n${agentLines}${worktreeSection}\n\n## Previous Cycles\n${cycleLines}\n\n## Context Files\n${contextLines}\n\n## Git Worktrees\n${worktreeHint}\n</state>`;\n}\n\nexport async function spawnOrchestrator(sessionId: string, cwd: string, windowId: string, message?: string): Promise<void> {\n  const session = state.getSession(cwd, sessionId);\n  const basePrompt = loadOrchestratorPrompt(cwd);\n  const formattedState = formatStateForOrchestrator(session);\n\n  // System prompt: template only (no state)\n  const cycleNum = session.orchestratorCycles.length + 1;\n  const promptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-system-${cycleNum}.md`;\n  writeFileSync(promptFilePath, basePrompt, 'utf-8');\n\n  sessionWindowMap.set(sessionId, windowId);\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='orchestrator'`,\n  ].join(' && ');\n\n  // User message: state block + contextual prompt\n  let userPrompt: string;\n  if (message) {\n    userPrompt = `${formattedState}\\n\\nThe user resumed this session with new instructions: ${message}`;\n  } else {\n    // Check last completed cycle for a stored nextPrompt\n    const lastCycle = [...session.orchestratorCycles].reverse().find(c => c.completedAt);\n    const storedPrompt = lastCycle?.nextPrompt;\n    if (storedPrompt) {\n      userPrompt = `${formattedState}\\n\\n${storedPrompt}`;\n    } else {\n      userPrompt = `${formattedState}\\n\\nReview the current session and delegate the next cycle of work.`;\n    }\n  }\n\n  const userPromptFilePath = `${promptsDir(cwd, sessionId)}/orchestrator-user-${cycleNum}.md`;\n  writeFileSync(userPromptFilePath, userPrompt, 'utf-8');\n  const pluginPath = resolve(import.meta.dirname, '../templates/orchestrator-plugin');\n  const settingsPath = resolve(import.meta.dirname, '../templates/orchestrator-settings.json');\n  const claudeCmd = `claude --dangerously-skip-permissions --settings \"${settingsPath}\" --plugin-dir \"${pluginPath}\" --append-system-prompt \"$(cat '${promptFilePath}')\" \"$(cat '${userPromptFilePath}')\"`;\n\n  const paneId = tmux.createPane(windowId, cwd);\n\n  sessionOrchestratorPane.set(sessionId, paneId);\n  registerPane(paneId, sessionId, 'orchestrator');\n  tmux.setPaneTitle(paneId, `orchestrator (${sessionId.slice(0, 8)})`);\n  tmux.setPaneStyle(paneId, ORCHESTRATOR_COLOR);\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n  const notifyCmd = `sisyphus notify pane-exited --pane-id ${paneId}`;\n  tmux.sendKeys(paneId, `${bannerCmd} ${envExports} && ${claudeCmd}; ${notifyCmd}`);\n\n  await state.addOrchestratorCycle(cwd, sessionId, {\n    cycle: cycleNum,\n    timestamp: new Date().toISOString(),\n    agentsSpawned: [],\n    paneId,\n  });\n}\n\nfunction resolveOrchestratorPane(sessionId: string, cwd: string): string | undefined {\n  const memPane = sessionOrchestratorPane.get(sessionId);\n  if (memPane) return memPane;\n  const session = state.getSession(cwd, sessionId);\n  const lastCycle = session.orchestratorCycles[session.orchestratorCycles.length - 1];\n  return lastCycle?.paneId ?? undefined;\n}\n\nexport async function handleOrchestratorYield(sessionId: string, cwd: string, nextPrompt?: string): Promise<void> {\n  const paneId = resolveOrchestratorPane(sessionId, cwd);\n  if (paneId) {\n    tmux.killPane(paneId);\n    unregisterPane(paneId);\n    sessionOrchestratorPane.delete(sessionId);\n  }\n\n  const windowId = sessionWindowMap.get(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  await state.completeOrchestratorCycle(cwd, sessionId, nextPrompt);\n\n  const session = state.getSession(cwd, sessionId);\n  const runningAgents = session.agents.filter(a => a.status === 'running');\n  if (runningAgents.length === 0) {\n    console.log(`[sisyphus] Orchestrator yielded with no running agents for session ${sessionId}`);\n  }\n}\n\nexport async function handleOrchestratorComplete(sessionId: string, cwd: string, report: string): Promise<void> {\n  await state.completeOrchestratorCycle(cwd, sessionId);\n  await state.completeSession(cwd, sessionId, report);\n\n  console.log(`[sisyphus] Session ${sessionId} completed: ${report}`);\n}\n\nexport function cleanupSessionMaps(sessionId: string): void {\n  sessionOrchestratorPane.delete(sessionId);\n  sessionWindowMap.delete(sessionId);\n  unregisterSessionPanes(sessionId);\n}\n","import { readFileSync } from 'node:fs';\nimport { homedir } from 'node:os';\nimport { join } from 'node:path';\n\nexport const ORCHESTRATOR_COLOR = 'yellow';\n\nconst AGENT_PALETTE = ['blue', 'green', 'magenta', 'cyan', 'red', 'white'] as const;\n\nconst TMUX_COLOR_MAP: Record<string, string> = {\n  orange: 'colour208',\n  teal: 'colour6',\n};\n\nfunction normalizeTmuxColor(color: string): string {\n  return TMUX_COLOR_MAP[color] ?? color;\n}\n\nconst sessionColorIndex = new Map<string, number>();\n\nexport function getNextColor(sessionId: string): string {\n  const idx = sessionColorIndex.get(sessionId) ?? 0;\n  const color = AGENT_PALETTE[idx % AGENT_PALETTE.length]!;\n  sessionColorIndex.set(sessionId, idx + 1);\n  return color;\n}\n\nexport function resetColors(sessionId: string): void {\n  sessionColorIndex.delete(sessionId);\n}\n\nfunction extractFrontmatterColor(content: string): string | null {\n  const match = content.match(/^---\\n([\\s\\S]*?)\\n---/);\n  if (!match) return null;\n  const colorMatch = match[1]!.match(/^color:\\s*(.+)$/m);\n  return colorMatch ? colorMatch[1]!.trim() : null;\n}\n\nfunction findPluginInstallPath(namespace: string): string | null {\n  try {\n    const registryPath = join(homedir(), '.claude', 'plugins', 'installed_plugins.json');\n    const registry = JSON.parse(readFileSync(registryPath, 'utf-8'));\n    for (const key of Object.keys(registry)) {\n      if (key.startsWith(`${namespace}@`)) {\n        return registry[key].installPath ?? null;\n      }\n    }\n  } catch {\n    // File missing, parse error, or no match\n  }\n  return null;\n}\n\nexport function resolveAgentTypeColor(agentType: string, pluginDir: string, cwd: string): string | null {\n  if (!agentType) return null;\n\n  let namespace: string | undefined;\n  let name: string;\n\n  if (agentType.includes(':')) {\n    [namespace, name] = agentType.split(':', 2) as [string, string];\n  } else {\n    name = agentType;\n  }\n\n  const searchPaths: string[] = [];\n\n  if (namespace) {\n    // Bundled (handles sisyphus:* via pluginDir)\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n    // Installed plugin\n    const installPath = findPluginInstallPath(namespace);\n    if (installPath) {\n      searchPaths.push(join(installPath, 'agents', `${name}.md`));\n    }\n  } else {\n    // Project-local\n    searchPaths.push(join(cwd, '.claude', 'agents', `${name}.md`));\n    // User-global\n    searchPaths.push(join(homedir(), '.claude', 'agents', `${name}.md`));\n    // Bundled\n    searchPaths.push(join(pluginDir, 'agents', `${name}.md`));\n  }\n\n  for (const path of searchPaths) {\n    try {\n      const content = readFileSync(path, 'utf-8');\n      const color = extractFrontmatterColor(content);\n      if (color) return normalizeTmuxColor(color);\n    } catch {\n      // File doesn't exist, try next\n    }\n  }\n\n  return null;\n}\n","import { execSync } from 'node:child_process';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV }).trim();\n}\n\nfunction execSafe(cmd: string): string | null {\n  try {\n    return exec(cmd);\n  } catch {\n    return null;\n  }\n}\n\nexport function getCurrentTmuxSession(): string {\n  const tmuxEnv = process.env['TMUX'];\n  if (!tmuxEnv) throw new Error('Not running inside tmux');\n  return exec('tmux display-message -p \"#{session_name}\"');\n}\n\nexport function createWindow(sessionName: string, windowName: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  exec(`tmux new-window -t \"${sessionName}\" -n \"${windowName}\"${cwdFlag} -P -F \"#{window_id}\"`);\n  return exec(`tmux display-message -t \"${sessionName}:${windowName}\" -p \"#{window_id}\"`);\n}\n\nexport function createPane(windowTarget: string, cwd?: string): string {\n  const cwdFlag = cwd ? ` -c ${shellQuote(cwd)}` : '';\n  const paneId = exec(`tmux split-window -h -t \"${windowTarget}\"${cwdFlag} -P -F \"#{pane_id}\"`);\n  execSafe(`tmux select-layout -t \"${windowTarget}\" even-horizontal`);\n  return paneId;\n}\n\nexport function sendKeys(paneTarget: string, command: string): void {\n  exec(`tmux send-keys -t \"${paneTarget}\" ${shellQuote(command)} Enter`);\n}\n\nexport function killPane(paneTarget: string): void {\n  execSafe(`tmux kill-pane -t \"${paneTarget}\"`);\n}\n\nexport function killWindow(windowTarget: string): void {\n  execSafe(`tmux kill-window -t \"${windowTarget}\"`);\n}\n\nexport interface PaneInfo {\n  paneId: string;\n  panePid: string;\n}\n\nexport function listPanes(windowTarget: string): PaneInfo[] {\n  const output = execSafe(`tmux list-panes -t \"${windowTarget}\" -F \"#{pane_id} #{pane_pid}\"`);\n  if (!output) return [];\n  return output\n    .split('\\n')\n    .filter(Boolean)\n    .map(line => {\n      const [paneId, panePid] = line.split(' ');\n      return { paneId: paneId!, panePid: panePid! };\n    });\n}\n\nexport function setPaneTitle(paneTarget: string, title: string): void {\n  execSafe(`tmux select-pane -t \"${paneTarget}\" -T ${shellQuote(title)}`);\n}\n\nexport function setPaneStyle(paneTarget: string, color: string): void {\n  const fmt = `#[fg=${color},bold] #{pane_title} #[fg=${color}]#{pane_current_path} #[default]`;\n  execSafe(`tmux set -p -t \"${paneTarget}\" pane-border-format ${shellQuote(fmt)}`);\n  // Store color as a per-pane user variable. The window-level border styles use a\n  // format string that resolves #{@pane_color} per-pane at render time, giving each\n  // pane its own border color (pane-border-style itself is window-level / last-write-wins).\n  execSafe(`tmux set -p -t \"${paneTarget}\" @pane_color \"${color}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n  execSafe(`tmux set -w -t \"${paneTarget}\" pane-active-border-style \"fg=#{?#{@pane_color},#{@pane_color},default}\"`);\n}\n\nexport function sendSignal(paneTarget: string, signal: string): void {\n  const info = execSafe(`tmux list-panes -t \"${paneTarget}\" -F \"#{pane_pid}\"`);\n  if (!info) return;\n  const pid = info.split('\\n')[0]?.trim();\n  if (pid) {\n    execSafe(`kill -${signal} ${pid}`);\n  }\n}\n\nexport function selectLayout(windowTarget: string, layout: string = 'even-horizontal'): void {\n  execSafe(`tmux select-layout -t \"${windowTarget}\" ${layout}`);\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","type PaneEntry = {\n  sessionId: string;\n  role: 'orchestrator' | 'agent';\n  agentId?: string;\n};\n\nconst paneMap = new Map<string, PaneEntry>();\n\nexport function registerPane(paneId: string, sessionId: string, role: 'orchestrator' | 'agent', agentId?: string): void {\n  paneMap.set(paneId, { sessionId, role, agentId });\n}\n\nexport function unregisterPane(paneId: string): void {\n  paneMap.delete(paneId);\n}\n\nexport function unregisterAgentPane(sessionId: string, agentId: string): void {\n  for (const [paneId, entry] of paneMap) {\n    if (entry.sessionId === sessionId && entry.agentId === agentId) {\n      paneMap.delete(paneId);\n      return;\n    }\n  }\n}\n\nexport function unregisterSessionPanes(sessionId: string): void {\n  for (const [paneId, entry] of paneMap) {\n    if (entry.sessionId === sessionId) {\n      paneMap.delete(paneId);\n    }\n  }\n}\n\nexport function lookupPane(paneId: string): PaneEntry | undefined {\n  return paneMap.get(paneId);\n}\n","import { readFileSync, writeFileSync, mkdirSync, readdirSync, existsSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport type { Agent, AgentReport } from '../shared/types.js';\nimport * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getNextColor, resolveAgentTypeColor } from './colors.js';\nimport { getWindowId } from './orchestrator.js';\nimport { promptsDir, reportsDir, reportFilePath } from '../shared/paths.js';\nimport { createWorktreeShell, bootstrapWorktree, loadWorktreeConfig, countWorktreeAgents } from './worktree.js';\nimport { registerPane, unregisterPane, unregisterAgentPane } from './pane-registry.js';\n\nconst agentCounters = new Map<string, number>();\n\nexport function resetAgentCounter(sessionId: string, value: number = 0): void {\n  agentCounters.set(sessionId, value);\n}\n\nexport function resetAgentCounterFromState(sessionId: string, agents: { id: string }[]): void {\n  let max = 0;\n  for (const a of agents) {\n    const match = a.id.match(/^agent-(\\d+)$/);\n    if (match) max = Math.max(max, parseInt(match[1]!, 10));\n  }\n  agentCounters.set(sessionId, max);\n}\n\nexport function clearAgentCounter(sessionId: string): void {\n  agentCounters.delete(sessionId);\n}\n\ninterface WorktreeContext {\n  offset: number;\n  total: number;\n  branchName: string;\n}\n\nfunction renderAgentSuffix(sessionId: string, instruction: string, worktreeContext?: WorktreeContext): string {\n  const templatePath = resolve(import.meta.dirname, '../templates/agent-suffix.md');\n  let template: string;\n  try {\n    template = readFileSync(templatePath, 'utf-8');\n  } catch {\n    template = `# Sisyphus Agent\\nSession: {{SESSION_ID}}\\nTask: {{INSTRUCTION}}`;\n  }\n\n  let worktreeBlock = '';\n  if (worktreeContext) {\n    worktreeBlock = [\n      '## Worktree Context',\n      `You are working in an isolated git worktree on branch \\`${worktreeContext.branchName}\\`.`,\n      `If you start any services that require ports, add ${worktreeContext.offset} to the default port.`,\n    ].join('\\n');\n  }\n\n  return template\n    .replace(/\\{\\{SESSION_ID\\}\\}/g, sessionId)\n    .replace(/\\{\\{INSTRUCTION\\}\\}/g, instruction)\n    .replace(/\\{\\{WORKTREE_CONTEXT\\}\\}/g, worktreeBlock);\n}\n\nexport interface SpawnAgentOpts {\n  sessionId: string;\n  cwd: string;\n  agentType: string;\n  name: string;\n  instruction: string;\n  windowId: string;\n  worktree?: boolean;\n}\n\nexport async function spawnAgent(opts: SpawnAgentOpts): Promise<Agent> {\n  const { sessionId, cwd, agentType, name, instruction, windowId } = opts;\n  const count = (agentCounters.get(sessionId) ?? 0) + 1;\n  agentCounters.set(sessionId, count);\n  const agentId = `agent-${String(count).padStart(3, '0')}`;\n  const pluginPath = resolve(import.meta.dirname, '../templates/agent-plugin');\n  const color = resolveAgentTypeColor(agentType, pluginPath, cwd) ?? getNextColor(sessionId);\n\n  let paneCwd = cwd;\n  let worktreePath: string | undefined;\n  let branchName: string | undefined;\n  let worktreeContext: WorktreeContext | undefined;\n\n  if (opts.worktree) {\n    // Fast: git branch + worktree add + symlinks only (no bootstrap/init)\n    const wt = createWorktreeShell(cwd, sessionId, agentId);\n    worktreePath = wt.worktreePath;\n    branchName = wt.branchName;\n    paneCwd = worktreePath;\n\n    const session = state.getSession(cwd, sessionId);\n    const portOffset = countWorktreeAgents(session.agents) + 1;\n    worktreeContext = { offset: portOffset, total: portOffset, branchName };\n  }\n\n  const paneId = tmux.createPane(windowId, paneCwd);\n  registerPane(paneId, sessionId, 'agent', agentId);\n  tmux.setPaneTitle(paneId, `${name} (${agentId})`);\n  tmux.setPaneStyle(paneId, color);\n\n  const suffix = renderAgentSuffix(sessionId, instruction, worktreeContext);\n  const suffixFilePath = `${promptsDir(cwd, sessionId)}/${agentId}-system.md`;\n  writeFileSync(suffixFilePath, suffix, 'utf-8');\n\n  const bannerPath = resolve(import.meta.dirname, '../templates/banner.txt');\n  const bannerCmd = existsSync(bannerPath) ? `cat '${bannerPath}' &&` : '';\n\n  const envExports = [\n    `export SISYPHUS_SESSION_ID='${sessionId}'`,\n    `export SISYPHUS_AGENT_ID='${agentId}'`,\n    ...(worktreeContext ? [`export SISYPHUS_PORT_OFFSET='${worktreeContext.offset}'`] : []),\n  ].join(' && ');\n\n  const agentFlag = agentType ? ` --agent ${shellQuote(agentType)}` : '';\n  const claudeCmd = `claude --dangerously-skip-permissions --plugin-dir \"${pluginPath}\"${agentFlag} --append-system-prompt \"$(cat '${suffixFilePath}')\" ${shellQuote(instruction)}`;\n  const notifyCmd = `sisyphus notify pane-exited --pane-id ${paneId}`;\n  const fullCmd = `${bannerCmd} ${envExports} && ${claudeCmd}; ${notifyCmd}`;\n\n  const agent: Agent = {\n    id: agentId,\n    name,\n    agentType,\n    color,\n    instruction,\n    status: 'running',\n    spawnedAt: new Date().toISOString(),\n    completedAt: null,\n    reports: [],\n    paneId,\n    ...(worktreePath ? { worktreePath, branchName, mergeStatus: 'pending' as const } : {}),\n  };\n\n  await state.addAgent(cwd, sessionId, agent);\n\n  if (opts.worktree && worktreePath) {\n    // Defer bootstrap so the daemon can respond to the CLI before running\n    // the potentially slow init command (e.g. npm install).\n    // The pane is already visible; Claude command is sent after bootstrap.\n    const config = loadWorktreeConfig(cwd);\n    if (config) {\n      const wtPath = worktreePath;\n      setImmediate(() => {\n        try {\n          bootstrapWorktree(cwd, wtPath, config);\n        } catch (err) {\n          console.error(`[sisyphus] worktree bootstrap failed for ${agentId}: ${err instanceof Error ? err.message : err}`);\n        }\n        tmux.sendKeys(paneId, fullCmd);\n      });\n    } else {\n      tmux.sendKeys(paneId, fullCmd);\n    }\n  } else {\n    tmux.sendKeys(paneId, fullCmd);\n  }\n\n  return agent;\n}\n\nfunction nextReportNumber(cwd: string, sessionId: string, agentId: string): string {\n  const dir = reportsDir(cwd, sessionId);\n  try {\n    const files = readdirSync(dir).filter(f => f.startsWith(`${agentId}-`) && !f.endsWith('-final.md'));\n    return String(files.length + 1).padStart(3, '0');\n  } catch {\n    return '001';\n  }\n}\n\nexport async function handleAgentReport(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  content: string,\n): Promise<void> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const num = nextReportNumber(cwd, sessionId, agentId);\n  const filePath = reportFilePath(cwd, sessionId, agentId, num);\n  writeFileSync(filePath, content, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'update',\n    filePath,\n    summary: content.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n}\n\nexport async function handleAgentSubmit(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  report: string,\n): Promise<boolean> {\n  const dir = reportsDir(cwd, sessionId);\n  mkdirSync(dir, { recursive: true });\n\n  const filePath = reportFilePath(cwd, sessionId, agentId, 'final');\n  writeFileSync(filePath, report, 'utf-8');\n\n  const entry: AgentReport = {\n    type: 'final',\n    filePath,\n    summary: report.slice(0, 200),\n    timestamp: new Date().toISOString(),\n  };\n  await state.appendAgentReport(cwd, sessionId, agentId, entry);\n\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'completed',\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  const agentArr = session.agents;\n  const agent = agentArr.slice().reverse().find(a => a.id === agentId);\n  if (agent) {\n    unregisterPane(agent.paneId);\n    tmux.killPane(agent.paneId);\n  }\n\n  const windowId = getWindowId(sessionId);\n  if (windowId) tmux.selectLayout(windowId);\n\n  return allAgentsDone(session);\n}\n\nexport async function handleAgentKilled(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n  reason: string,\n): Promise<boolean> {\n  unregisterAgentPane(sessionId, agentId);\n  await state.updateAgent(cwd, sessionId, agentId, {\n    status: 'killed',\n    killedReason: reason,\n    completedAt: new Date().toISOString(),\n  });\n\n  const session = state.getSession(cwd, sessionId);\n  return allAgentsDone(session);\n}\n\n// Note: this checks ALL running agents in the session, not just orchestrator-spawned ones.\n// Agents can also call `sisyphus spawn`, and those child agents are included here —\n// the orchestrator won't respawn until every agent (including agent-spawned ones) finishes.\nfunction allAgentsDone(session: import('../shared/types.js').Session): boolean {\n  const running = session.agents.filter(a => a.status === 'running');\n  return running.length === 0 && session.agents.length > 0;\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n","import { execSync } from 'node:child_process';\nimport { existsSync, mkdirSync, readFileSync, readdirSync, rmSync } from 'node:fs';\nimport { dirname, join } from 'node:path';\nimport type { Agent } from '../shared/types.js';\nimport type { WorktreeConfig } from '../shared/config.js';\nimport { worktreeConfigPath, worktreeBaseDir } from '../shared/paths.js';\n\nconst EXEC_ENV = {\n  ...process.env,\n  PATH: `/opt/homebrew/bin:/usr/local/bin:${process.env['PATH'] ?? '/usr/bin:/bin'}`,\n};\n\nfunction exec(cmd: string, cwd?: string): string {\n  return execSync(cmd, { encoding: 'utf-8', env: EXEC_ENV, cwd }).trim();\n}\n\nfunction execSafe(cmd: string, cwd?: string): string | null {\n  try {\n    return exec(cmd, cwd);\n  } catch {\n    return null;\n  }\n}\n\nfunction shellQuote(s: string): string {\n  return `'${s.replace(/'/g, \"'\\\\''\")}'`;\n}\n\nexport interface MergeResult {\n  agentId: string;\n  name: string;\n  status: 'merged' | 'conflict' | 'no-changes';\n  conflictDetails?: string;\n}\n\nexport function loadWorktreeConfig(cwd: string): WorktreeConfig | null {\n  try {\n    const content = readFileSync(worktreeConfigPath(cwd), 'utf-8');\n    return JSON.parse(content) as WorktreeConfig;\n  } catch {\n    return null;\n  }\n}\n\n/**\n * Create git worktree (branch + add + symlinks) without running bootstrap.\n * Fast enough to run synchronously before responding to the CLI.\n */\nexport function createWorktreeShell(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n): { worktreePath: string; branchName: string } {\n  const branchName = `sisyphus/${sessionId.slice(0, 8)}/${agentId}`;\n  // Bug B: Include session prefix in path to prevent cross-session collisions\n  const worktreePath = join(worktreeBaseDir(cwd), sessionId.slice(0, 8), agentId);\n\n  mkdirSync(dirname(worktreePath), { recursive: true });\n\n  // Bug C: Clean stale worktree entries before creating\n  execSafe(`git -C ${shellQuote(cwd)} worktree prune`);\n  if (existsSync(worktreePath)) {\n    execSafe(`git -C ${shellQuote(cwd)} worktree remove --force ${shellQuote(worktreePath)}`);\n  }\n  // If the branch already exists from a previous run, remove it\n  execSafe(`git -C ${shellQuote(cwd)} branch -D ${shellQuote(branchName)}`);\n\n  exec(`git -C ${shellQuote(cwd)} branch ${shellQuote(branchName)} HEAD`);\n  exec(`git -C ${shellQuote(cwd)} worktree add ${shellQuote(worktreePath)} ${shellQuote(branchName)}`);\n\n  return { worktreePath, branchName };\n}\n\n/**\n * Create git worktree AND run bootstrap synchronously.\n * Use createWorktreeShell + bootstrapWorktree separately when you need\n * to defer the slow bootstrap to avoid blocking.\n */\nexport function createWorktree(\n  cwd: string,\n  sessionId: string,\n  agentId: string,\n): { worktreePath: string; branchName: string } {\n  const result = createWorktreeShell(cwd, sessionId, agentId);\n\n  const config = loadWorktreeConfig(cwd);\n  if (config) {\n    bootstrapWorktree(cwd, result.worktreePath, config);\n  }\n\n  return result;\n}\n\nexport function bootstrapWorktree(cwd: string, worktreePath: string, config: WorktreeConfig): void {\n  // Process copy entries\n  if (config.copy) {\n    for (const entry of config.copy) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`cp -r ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process clone entries (APFS CoW on macOS, fallback to cp -r)\n  if (config.clone) {\n    for (const entry of config.clone) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      const src = shellQuote(join(cwd, entry));\n      const dstQ = shellQuote(dest);\n      if (execSafe(`cp -Rc ${src} ${dstQ}`) === null) {\n        execSafe(`cp -r ${src} ${dstQ}`);\n      }\n    }\n  }\n\n  // Process symlink entries\n  if (config.symlink) {\n    for (const entry of config.symlink) {\n      const dest = join(worktreePath, entry);\n      mkdirSync(dirname(dest), { recursive: true });\n      execSafe(`ln -s ${shellQuote(join(cwd, entry))} ${shellQuote(dest)}`);\n    }\n  }\n\n  // Process init command\n  if (config.init) {\n    try {\n      exec(config.init, worktreePath);\n    } catch (err) {\n      console.error(`[sisyphus] worktree init command failed: ${err instanceof Error ? err.message : err}`);\n    }\n  }\n}\n\n/**\n * Resolve the branch checked out in a worktree by parsing `git worktree list --porcelain`.\n * Returns null if the worktree isn't found or has a detached HEAD.\n */\nfunction resolveWorktreeBranch(cwd: string, worktreePath: string): string | null {\n  const output = execSafe(`git -C ${shellQuote(cwd)} worktree list --porcelain`);\n  if (!output) return null;\n\n  const lines = output.split('\\n');\n  for (let i = 0; i < lines.length; i++) {\n    if (lines[i] === `worktree ${worktreePath}`) {\n      for (let j = i + 1; j < lines.length; j++) {\n        const line = lines[j]!;\n        if (line === '') break; // end of this worktree block\n        if (line.startsWith('branch refs/heads/')) {\n          return line.slice('branch refs/heads/'.length);\n        }\n      }\n      break;\n    }\n  }\n  return null;\n}\n\nexport function mergeWorktrees(cwd: string, agents: Agent[]): MergeResult[] {\n  const pending = agents.filter(\n    a => a.worktreePath && a.mergeStatus === 'pending',\n  );\n\n  const results: MergeResult[] = [];\n\n  // Snapshot any uncommitted .sisyphus state changes before merging\n  // so agent branches don't conflict with main's session state updates\n  execSafe(`git -C ${shellQuote(cwd)} add .sisyphus`);\n  execSafe(`git -C ${shellQuote(cwd)} commit -m 'sisyphus: snapshot session state before merge'`);\n\n  for (const agent of pending) {\n    const branch = resolveWorktreeBranch(cwd, agent.worktreePath!);\n\n    if (!branch) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      // Best-effort cleanup — branch name unknown, just remove worktree dir\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)} --force`);\n      continue;\n    }\n\n    // Check if branch has commits ahead of merge base\n    const aheadLog = execSafe(`git -C ${shellQuote(cwd)} log HEAD..${shellQuote(branch)} --oneline`);\n    if (!aheadLog) {\n      results.push({ agentId: agent.id, name: agent.name, status: 'no-changes' });\n      cleanupWorktree(cwd, agent.worktreePath!, branch);\n      continue;\n    }\n\n    // Attempt merge — capture stderr on failure for conflict details\n    const mergeMsg = `sisyphus: merge ${agent.id} (${agent.name})`;\n    const mergeCmd = `git -C ${shellQuote(cwd)} merge --no-ff ${shellQuote(branch)} -m ${shellQuote(mergeMsg)}`;\n\n    try {\n      exec(mergeCmd);\n      // Merge succeeded — clean up worktree and branch\n      execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(agent.worktreePath!)}`);\n      execSafe(`git -C ${shellQuote(cwd)} branch -d ${shellQuote(branch)}`);\n      results.push({ agentId: agent.id, name: agent.name, status: 'merged' });\n    } catch (err: unknown) {\n      // Merge failed — abort and leave worktree intact for manual resolution\n      execSafe(`git -C ${shellQuote(cwd)} merge --abort`);\n      // Git outputs conflict details (which files, conflict type) to stdout, not stderr\n      const errObj = err as { stdout?: Buffer | string; stderr?: Buffer | string };\n      const stdout = errObj.stdout\n        ? (typeof errObj.stdout === 'string' ? errObj.stdout : errObj.stdout.toString('utf-8')).trim()\n        : '';\n      const stderr = errObj.stderr\n        ? (typeof errObj.stderr === 'string' ? errObj.stderr : errObj.stderr.toString('utf-8')).trim()\n        : '';\n      const conflictDetails = stdout || stderr || (err instanceof Error ? err.message : String(err));\n      results.push({ agentId: agent.id, name: agent.name, status: 'conflict', conflictDetails });\n    }\n  }\n\n  return results;\n}\n\nexport function cleanupWorktree(cwd: string, worktreePath: string, branchName: string): void {\n  execSafe(`git -C ${shellQuote(cwd)} worktree remove ${shellQuote(worktreePath)} --force`);\n  execSafe(`git -C ${shellQuote(cwd)} branch -D ${shellQuote(branchName)}`);\n\n  // Remove the worktree base dir if empty\n  const baseDir = dirname(worktreePath);\n  try {\n    const entries = readdirSync(baseDir);\n    if (entries.length === 0) {\n      rmSync(baseDir, { recursive: true });\n    }\n  } catch {\n    // Ignore — directory may already be gone\n  }\n}\n\nexport function countWorktreeAgents(agents: Agent[]): number {\n  return agents.filter(a => a.worktreePath && a.status === 'running').length;\n}\n","import * as state from './state.js';\nimport * as tmux from './tmux.js';\nimport { getOrchestratorPaneId, cleanupSessionMaps } from './orchestrator.js';\nimport { handleAgentKilled } from './agent.js';\n\ntype RespawnCallback = (sessionId: string, cwd: string, windowId: string) => void;\n\nlet monitorInterval: ReturnType<typeof setInterval> | null = null;\nlet onAllAgentsDone: RespawnCallback | null = null;\n\nexport function setRespawnCallback(cb: RespawnCallback): void {\n  onAllAgentsDone = cb;\n}\n\nexport function startMonitor(pollIntervalMs: number = 5000): void {\n  if (monitorInterval) return;\n  monitorInterval = setInterval(() => {\n    pollAllSessions().catch(err => {\n      console.error('[sisyphus] Pane monitor error:', err);\n    });\n  }, pollIntervalMs);\n}\n\nexport function stopMonitor(): void {\n  if (monitorInterval) {\n    clearInterval(monitorInterval);\n    monitorInterval = null;\n  }\n}\n\nconst trackedSessions = new Map<string, { id: string; cwd: string; tmuxSession: string; windowId: string | null }>();\n\nexport function trackSession(sessionId: string, cwd: string, tmuxSession: string): void {\n  // windowId is registered separately via updateTrackedWindow after spawnOrchestrator sets it\n  const existing = trackedSessions.get(sessionId);\n  trackedSessions.set(sessionId, { id: sessionId, cwd, tmuxSession, windowId: existing ? existing.windowId : null });\n}\n\nexport function updateTrackedWindow(sessionId: string, windowId: string): void {\n  const entry = trackedSessions.get(sessionId);\n  if (!entry) throw new Error(`Cannot update window for untracked session: ${sessionId}`);\n  entry.windowId = windowId;\n}\n\nexport function untrackSession(sessionId: string): void {\n  trackedSessions.delete(sessionId);\n}\n\nasync function pollAllSessions(): Promise<void> {\n  for (const { id: sessionId, cwd, windowId } of trackedSessions.values()) {\n    if (windowId) {\n      await pollSession(sessionId, cwd, windowId);\n    }\n  }\n}\n\nasync function pollSession(sessionId: string, cwd: string, windowId: string): Promise<void> {\n  let session;\n  try {\n    session = state.getSession(cwd, sessionId);\n  } catch (err) {\n    console.error(`[sisyphus] Failed to read state for session ${sessionId}:`, err);\n    return;\n  }\n\n  if (session.status === 'completed') {\n    const orchPaneId = getOrchestratorPaneId(sessionId);\n    if (orchPaneId) {\n      const livePanes = tmux.listPanes(windowId);\n      const livePaneIds = new Set(livePanes.map(p => p.paneId));\n      if (!livePaneIds.has(orchPaneId)) {\n        cleanupSessionMaps(sessionId);\n        untrackSession(sessionId);\n        console.log(`[sisyphus] Session ${sessionId} cleaned up: orchestrator pane closed by user`);\n      }\n    } else {\n      // No orchestrator pane tracked — clean up immediately\n      cleanupSessionMaps(sessionId);\n      untrackSession(sessionId);\n    }\n    return;\n  }\n\n  if (session.status !== 'active') return;\n\n  const livePanes = tmux.listPanes(windowId);\n  if (livePanes.length === 0) return;\n\n  const livePaneIds = new Set(livePanes.map(p => p.paneId));\n\n  let paneRemoved = false;\n  for (const agent of session.agents) {\n    if (agent.status !== 'running') continue;\n    if (!livePaneIds.has(agent.paneId)) {\n      paneRemoved = true;\n      const allDone = await handleAgentKilled(cwd, sessionId, agent.id, 'pane closed by user');\n      if (allDone && onAllAgentsDone) {\n        onAllAgentsDone(sessionId, cwd, windowId);\n      }\n    }\n  }\n\n  if (paneRemoved) tmux.selectLayout(windowId);\n\n  // Check orchestrator pane\n  const orchPaneId = getOrchestratorPaneId(sessionId);\n  if (orchPaneId && !livePaneIds.has(orchPaneId)) {\n    // Orchestrator pane disappeared without a yield command\n    const runningAgents = session.agents.filter(a => a.status === 'running');\n    if (runningAgents.length === 0) {\n      // No agents running and orchestrator gone — pause\n      await state.updateSessionStatus(cwd, sessionId, 'paused');\n      console.log(`[sisyphus] Session ${sessionId} paused: orchestrator pane disappeared`);\n    }\n  }\n\n  // Re-read state since handleAgentKilled may have mutated it\n  session = state.getSession(cwd, sessionId);\n  if (\n    session.status === 'active' &&\n    session.agents.length > 0 &&\n    session.agents.every(a => a.status !== 'running') &&\n    (!orchPaneId || !livePaneIds.has(orchPaneId)) &&\n    onAllAgentsDone\n  ) {\n    console.log(`[sisyphus] Detected stuck session ${sessionId}: all agents done, no orchestrator — triggering respawn`);\n    onAllAgentsDone(sessionId, cwd, windowId);\n  }\n}\n","import { execSync } from 'node:child_process';\nimport { readFileSync, writeFileSync, unlinkSync } from 'node:fs';\nimport { resolve } from 'node:path';\nimport { get } from 'node:https';\nimport { daemonUpdatingPath } from '../shared/paths.js';\n\nfunction isNewer(latest: string, current: string): boolean {\n  const a = latest.split('.').map(Number);\n  const b = current.split('.').map(Number);\n  for (let i = 0; i < Math.max(a.length, b.length); i++) {\n    const av = a[i] ?? 0;\n    const bv = b[i] ?? 0;\n    if (av > bv) return true;\n    if (av < bv) return false;\n  }\n  return false;\n}\n\nfunction readPackageVersion(): string {\n  // Bundled: dist/daemon.js → ../package.json\n  // Source (tsx): src/daemon/updater.ts → ../../package.json\n  for (const rel of ['../package.json', '../../package.json']) {\n    try {\n      const raw = readFileSync(resolve(import.meta.dirname, rel), 'utf-8');\n      const pkg = JSON.parse(raw) as { name?: string; version?: string };\n      if (pkg.name === 'sisyphi' && pkg.version) return pkg.version;\n    } catch {}\n  }\n  return '0.0.0';\n}\n\nconst currentVersion = readPackageVersion();\n\nexport function getCurrentVersion(): string {\n  return currentVersion;\n}\n\nexport function checkForUpdate(): Promise<{ current: string; latest: string } | null> {\n  return new Promise((resolve) => {\n    const timeout = setTimeout(() => {\n      resolve(null);\n    }, 5000);\n\n    const req = get('https://registry.npmjs.org/sisyphi/latest', (res) => {\n      let data = '';\n      res.on('data', (chunk: Buffer) => { data += chunk.toString(); });\n      res.on('end', () => {\n        clearTimeout(timeout);\n        try {\n          const { version: latest } = JSON.parse(data) as { version: string };\n          if (latest && isNewer(latest, currentVersion)) {\n            resolve({ current: currentVersion, latest });\n          } else {\n            resolve(null);\n          }\n        } catch {\n          resolve(null);\n        }\n      });\n    });\n\n    req.on('error', () => {\n      clearTimeout(timeout);\n      resolve(null);\n    });\n  });\n}\n\nexport function applyUpdate(expectedVersion: string): boolean {\n  try {\n    // launchd gives a minimal PATH — ensure node/npm directory is on PATH\n    const nodeDir = resolve(process.execPath, '..');\n    const env = { ...process.env, PATH: `${nodeDir}:${process.env.PATH ?? ''}` };\n    execSync('npm install -g sisyphi', { timeout: 15000, stdio: 'pipe', env });\n\n    // Verify the install actually landed the expected version\n    const result = execSync('npm ls -g sisyphi --json --depth=0', {\n      timeout: 5000, encoding: 'utf-8', env,\n    });\n    const info = JSON.parse(result) as { dependencies?: { sisyphi?: { version?: string } } };\n    const installed = info.dependencies?.sisyphi?.version;\n    if (installed !== expectedVersion) {\n      console.error(`[sisyphus] Update installed ${installed} but expected ${expectedVersion}`);\n      return false;\n    }\n    return true;\n  } catch (err) {\n    console.error('[sisyphus] Auto-update failed:', err);\n    return false;\n  }\n}\n\nfunction markUpdating(version: string): void {\n  try { writeFileSync(daemonUpdatingPath(), version, 'utf-8'); } catch {}\n}\n\nfunction clearUpdating(): void {\n  try { unlinkSync(daemonUpdatingPath()); } catch {}\n}\n\nexport async function checkAndApply(): Promise<void> {\n  clearUpdating(); // clean up stale marker from previous run\n  try {\n    const update = await checkForUpdate();\n    if (!update) return;\n\n    console.log(`[sisyphus] Update available: ${update.current} → ${update.latest}`);\n    markUpdating(update.latest);\n    const success = applyUpdate(update.latest);\n    if (success) {\n      console.log(`[sisyphus] Updated to ${update.latest}, restarting daemon...`);\n      process.exit(0); // launchd respawns with new code\n    }\n    clearUpdating();\n  } catch (err) {\n    clearUpdating();\n    console.error('[sisyphus] Auto-update check failed:', err);\n  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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "sisyphi",
-  "version": "0.1.15",
+  "version": "0.1.17",
   "description": "tmux-integrated orchestration daemon for Claude Code multi-agent workflows",
   "license": "MIT",
   "repository": {

package/dist/chunk-N2BPQOO2.js.map

@@ -1 +0,0 @@
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